HEADER HYDROLASE 12-NOV-19 6LAA TITLE CRYSTAL STRUCTURE OF FULL-LENGTH CYP116B46 FROM TEPIDIPHILUS TITLE 2 THERMOPHILUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME P450; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CYP116B46; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TEPIDIPHILUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 876478; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PRSF-DUET I KEYWDS ANTIBIOTICS, BIOSYNTHESIS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.L.ZHANG,T.P.KO,J.W.HUANG,W.D.LIU,C.C.CHEN,R.T.GUO REVDAT 3 22-NOV-23 6LAA 1 REMARK REVDAT 2 12-AUG-20 6LAA 1 TITLE COMPND SOURCE DBREF REVDAT 1 10-JUN-20 6LAA 0 JRNL AUTH L.L.ZHANG,Z.Z.XIE,Z.W.LIU,S.Y.ZHOU,L.X.MA,W.D.LIU,J.W.HUANG, JRNL AUTH 2 T.P.KO,X.Q.LI,Y.C.HU,J.MIN,X.J.YU,R.T.GUO,C.C.CHEN JRNL TITL STRUCTURAL INSIGHT INTO THE ELECTRON TRANSFER PATHWAY OF A JRNL TITL 2 SELF-SUFFICIENT P450 MONOOXYGENASE. JRNL REF NAT COMMUN V. 11 2676 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 32472090 JRNL DOI 10.1038/S41467-020-16500-5 REMARK 2 REMARK 2 RESOLUTION. 2.13 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.13 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 62276 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3114 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.1100 - 4.5800 0.99 6251 329 0.1509 0.1635 REMARK 3 2 4.5800 - 3.6400 0.99 5944 313 0.1373 0.1766 REMARK 3 3 3.6400 - 3.1800 1.00 5965 314 0.1717 0.2430 REMARK 3 4 3.1800 - 2.8900 1.00 5906 311 0.1868 0.2280 REMARK 3 5 2.8900 - 2.6900 1.00 5903 311 0.1888 0.2623 REMARK 3 6 2.6800 - 2.5300 1.00 5879 309 0.1805 0.2180 REMARK 3 7 2.5300 - 2.4000 1.00 5883 310 0.1921 0.2448 REMARK 3 8 2.4000 - 2.3000 1.00 5845 307 0.2057 0.2737 REMARK 3 9 2.3000 - 2.2100 1.00 5797 305 0.2167 0.2772 REMARK 3 10 2.2100 - 2.1300 0.99 5789 305 0.2345 0.2950 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6LAA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1300014412. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 05A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9998 REMARK 200 MONOCHROMATOR : LN2 COOLED SI(111) DOUBLE REMARK 200 CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62367 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.130 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 16.50 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.13 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 15.20 REMARK 200 R MERGE FOR SHELL (I) : 1.50200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6GII REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NA/K PHOSPHATE, GLYCEROL, PH 6.9, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 121.32050 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 47.35750 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 47.35750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 181.98075 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 47.35750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 47.35750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 60.66025 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 47.35750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.35750 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 181.98075 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 47.35750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.35750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 60.66025 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 121.32050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 THR A 3 REMARK 465 GLU A 4 REMARK 465 LEU A 5 REMARK 465 LYS A 6 REMARK 465 GLU A 7 REMARK 465 THR A 8 REMARK 465 ALA A 9 REMARK 465 ARG A 10 REMARK 465 GLY A 11 REMARK 465 THR A 12 REMARK 465 CYS A 13 REMARK 465 PRO A 14 REMARK 465 VAL A 15 REMARK 465 ALA A 16 REMARK 465 HIS A 17 REMARK 465 GLY A 18 REMARK 465 GLY A 19 REMARK 465 GLN A 20 REMARK 465 SER A 21 REMARK 465 SER A 22 REMARK 465 VAL A 23 REMARK 465 GLY A 24 REMARK 465 GLY A 25 REMARK 465 CYS A 26 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 45 75.16 -150.65 REMARK 500 GLN A 97 -72.90 -64.16 REMARK 500 ALA A 112 41.94 -142.91 REMARK 500 ASN A 114 -108.24 -125.20 REMARK 500 THR A 116 -122.68 -109.89 REMARK 500 MET A 171 -47.22 -155.46 REMARK 500 ASP A 190 78.43 -153.13 REMARK 500 HIS A 276 -33.38 -133.34 REMARK 500 ASP A 303 89.46 -151.03 REMARK 500 ASN A 318 55.45 -143.51 REMARK 500 ALA A 322 -68.82 -92.85 REMARK 500 ARG A 511 65.29 -118.77 REMARK 500 SER A 519 -168.54 -78.33 REMARK 500 ASN A 721 19.03 59.89 REMARK 500 ASP A 727 -83.20 -132.17 REMARK 500 GLU A 730 33.69 -149.30 REMARK 500 ARG A 761 -65.71 -108.83 REMARK 500 CYS A 767 -30.12 -138.14 REMARK 500 ARG A 769 -157.70 -132.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1441 DISTANCE = 6.15 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 800 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 385 SG REMARK 620 2 HEM A 800 NA 102.8 REMARK 620 3 HEM A 800 NB 90.6 92.2 REMARK 620 4 HEM A 800 NC 85.5 171.2 90.7 REMARK 620 5 HEM A 800 ND 99.5 85.2 170.0 90.5 REMARK 620 6 IMD A 803 N1 177.8 78.1 87.4 93.7 82.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 801 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 728 SG REMARK 620 2 FES A 801 S1 118.0 REMARK 620 3 FES A 801 S2 108.5 98.4 REMARK 620 4 CYS A 733 SG 103.4 111.2 118.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 801 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 736 SG REMARK 620 2 FES A 801 S1 113.2 REMARK 620 3 FES A 801 S2 113.3 100.9 REMARK 620 4 CYS A 766 SG 102.8 116.2 110.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 800 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FES A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMD A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CO3 A 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 805 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 806 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 807 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 808 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 809 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 810 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 811 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 812 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 813 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 814 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 815 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 816 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 817 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 818 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 819 DBREF1 6LAA A 1 779 UNP A0A0K6ITW2_9PROT DBREF2 6LAA A A0A0K6ITW2 1 779 SEQRES 1 A 779 MET GLU THR GLU LEU LYS GLU THR ALA ARG GLY THR CYS SEQRES 2 A 779 PRO VAL ALA HIS GLY GLY GLN SER SER VAL GLY GLY CYS SEQRES 3 A 779 PRO VAL HIS ARG LEU ALA GLU ASP PHE ASP PRO PHE GLN SEQRES 4 A 779 ASP ALA TYR MET ALA ASP PRO ALA GLN PHE VAL ARG TRP SEQRES 5 A 779 ALA ARG GLU GLN VAL PRO ILE PHE TYR ALA PRO LYS LEU SEQRES 6 A 779 ASN TYR TRP VAL VAL THR ARG TYR ASP THR ILE LYS GLN SEQRES 7 A 779 ILE PHE ARG ASP PRO VAL THR PHE SER PRO SER ASN VAL SEQRES 8 A 779 LEU GLN SER PHE ALA GLN PRO SER ALA GLU VAL ARG GLN SEQRES 9 A 779 VAL LEU GLU ARG TYR GLY TYR ALA PHE ASN ARG THR LEU SEQRES 10 A 779 VAL ASN GLU ASP GLU PRO MET HIS LEU GLU ARG ARG ARG SEQRES 11 A 779 VAL LEU MET GLU PRO PHE ALA SER GLU HIS LEU ALA GLU SEQRES 12 A 779 HIS GLU PRO MET VAL ARG GLU LEU VAL ARG ARG ALA VAL SEQRES 13 A 779 ASN ARG PHE ILE ASP THR GLY ARG ALA ASP LEU VAL ASP SEQRES 14 A 779 GLN MET ILE TRP GLU VAL PRO PHE THR VAL ALA LEU HIS SEQRES 15 A 779 PHE LEU GLY VAL ASP ASP ASP ASP ARG GLU LYS MET ARG SEQRES 16 A 779 ARG PHE ALA ILE ALA HIS THR VAL ASN ALA PHE GLY ARG SEQRES 17 A 779 PRO SER PRO GLU GLU GLN LEU ALA VAL ALA GLU THR VAL SEQRES 18 A 779 GLY GLN PHE TRP GLN PHE CYS GLY GLU VAL LEU GLU LYS SEQRES 19 A 779 MET ARG ARG THR ALA ASP GLY PRO GLY TRP MET ARG TYR SEQRES 20 A 779 SER ILE ARG GLN GLN LYS LEU TYR PRO ASP VAL VAL THR SEQRES 21 A 779 ASP SER TYR LEU HIS SER MET MET GLN ALA ILE ILE VAL SEQRES 22 A 779 ALA ALA HIS GLU THR THR VAL PHE ALA THR THR ASN ALA SEQRES 23 A 779 LEU LYS THR LEU LEU GLU HIS GLU THR VAL TRP ARG GLU SEQRES 24 A 779 ILE CYS ALA ASP PRO SER LEU ILE PRO ALA ALA ALA GLU SEQRES 25 A 779 GLU CYS LEU ARG TYR ASN GLY PRO VAL ALA GLY TRP ARG SEQRES 26 A 779 ARG ARG THR THR ARG GLU VAL GLU VAL GLU GLY VAL ARG SEQRES 27 A 779 LEU PRO VAL GLY ALA ASN ILE LEU MET VAL VAL ALA SER SEQRES 28 A 779 ALA ASN HIS ASP SER ALA HIS PHE ASP ASP PRO GLU PHE SEQRES 29 A 779 PHE ASP ILE GLY ARG SER ASN ALA SER GLU HIS LEU ASN SEQRES 30 A 779 PHE GLY TYR GLY ALA HIS GLN CYS LEU GLY ARG ASN LEU SEQRES 31 A 779 GLY ARG MET GLU MET GLN ILE MET ILE GLU GLU LEU SER SEQRES 32 A 779 ARG ARG LEU PRO HIS MET ARG LEU ALA GLU GLN ARG PHE SEQRES 33 A 779 ASP TYR LEU HIS ASN VAL SER PHE ARG ALA PRO ARG HIS SEQRES 34 A 779 LEU TRP VAL GLU TRP ASP PRO ALA GLN ASN PRO GLU ARG SEQRES 35 A 779 ARG ASP PRO ASP ILE LEU ARG LEU ARG GLN PRO VAL ARG SEQRES 36 A 779 ILE GLY PRO PRO ARG ALA LYS ASP VAL VAL ARG THR MET SEQRES 37 A 779 GLU VAL ALA ALA VAL GLU ARG PRO SER GLU ASP ILE VAL SEQRES 38 A 779 VAL LEU HIS LEU THR ARG PRO ASP ARG ARG PRO LEU PRO SEQRES 39 A 779 ARG TRP SER PRO GLY ALA HIS ILE ASP ILE GLU CYS GLY SEQRES 40 A 779 GLU PRO ASP ARG SER ARG GLN TYR SER LEU CYS SER ASP SEQRES 41 A 779 PRO GLU ASN ARG ASP ALA TRP ARG VAL ALA VAL GLN ARG SEQRES 42 A 779 ASP PRO ALA SER ARG GLY GLY SER ARG TRP ILE HIS GLU SEQRES 43 A 779 GLU VAL ARG PRO GLY MET LEU LEU ARG VAL ARG GLY PRO SEQRES 44 A 779 ARG ASN SER PHE ARG LEU ASP GLU HIS ALA PRO ARG TYR SEQRES 45 A 779 LEU PHE LEU ALA GLY GLY ILE GLY ILE THR PRO ILE MET SEQRES 46 A 779 THR MET ALA ALA ARG ALA LYS GLU LEU GLY THR ASP TYR SEQRES 47 A 779 GLU LEU HIS TYR SER VAL ARG SER ARG THR SER LEU ILE SEQRES 48 A 779 PHE VAL ASP GLU LEU ARG GLN ILE HIS GLY ASP ARG LEU SEQRES 49 A 779 HIS VAL TYR VAL SER GLU GLU GLY VAL ARG ASN ASP LEU SEQRES 50 A 779 ALA ALA LEU ILE ARG ARG ALA SER ALA GLY THR GLN ILE SEQRES 51 A 779 TYR ALA CYS GLY PRO GLN ARG MET LEU ASP THR LEU GLU SEQRES 52 A 779 ARG LEU ILE GLU ASN ARG PRO GLU VAL THR LEU ARG VAL SEQRES 53 A 779 GLU HIS PHE PHE GLY GLU PRO SER HIS LEU ASP PRO ALA SEQRES 54 A 779 LYS GLU ARG PRO PHE GLN VAL VAL LEU ARG ASN SER GLY SEQRES 55 A 779 LEU THR VAL GLU VAL PRO ALA ASP LYS THR LEU LEU GLU SEQRES 56 A 779 VAL LEU ARG ALA TYR ASN ILE GLU VAL GLN SER ASP CYS SEQRES 57 A 779 GLU GLU GLY LEU CYS GLY THR CYS GLU VAL SER VAL VAL SEQRES 58 A 779 GLU GLY GLU VAL ASP HIS ARG ASP SER VAL LEU THR ARG SEQRES 59 A 779 ALA GLU ARG ARG GLU ASN ARG ARG MET MET CYS CYS CYS SEQRES 60 A 779 SER ARG ALA LYS THR GLU ARG LEU VAL LEU ASP LEU HET HEM A 800 43 HET FES A 801 4 HET FMN A 802 31 HET IMD A 803 5 HET CO3 A 804 4 HET EDO A 805 4 HET EDO A 806 4 HET EDO A 807 4 HET EDO A 808 4 HET EDO A 809 4 HET EDO A 810 4 HET EDO A 811 4 HET EDO A 812 4 HET EDO A 813 4 HET EDO A 814 4 HET EDO A 815 4 HET EDO A 816 4 HET EDO A 817 4 HET EDO A 818 4 HET EDO A 819 4 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM FES FE2/S2 (INORGANIC) CLUSTER HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM IMD IMIDAZOLE HETNAM CO3 CARBONATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN HEM HEME HETSYN FMN RIBOFLAVIN MONOPHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 HEM C34 H32 FE N4 O4 FORMUL 3 FES FE2 S2 FORMUL 4 FMN C17 H21 N4 O9 P FORMUL 5 IMD C3 H5 N2 1+ FORMUL 6 CO3 C O3 2- FORMUL 7 EDO 15(C2 H6 O2) FORMUL 22 HOH *541(H2 O) HELIX 1 AA1 PRO A 27 PHE A 35 1 9 HELIX 2 AA2 GLN A 39 ASP A 45 1 7 HELIX 3 AA3 ASP A 45 VAL A 50 1 6 HELIX 4 AA4 VAL A 50 VAL A 57 1 8 HELIX 5 AA5 ARG A 72 ASP A 82 1 11 HELIX 6 AA6 SER A 99 TYR A 109 1 11 HELIX 7 AA7 PRO A 123 MET A 133 1 11 HELIX 8 AA8 GLU A 134 PHE A 136 5 3 HELIX 9 AA9 ALA A 137 GLU A 143 1 7 HELIX 10 AB1 HIS A 144 ILE A 160 1 17 HELIX 11 AB2 LEU A 167 MET A 171 1 5 HELIX 12 AB3 TRP A 173 GLY A 185 1 13 HELIX 13 AB4 ASP A 190 GLY A 207 1 18 HELIX 14 AB5 SER A 210 ARG A 237 1 28 HELIX 15 AB6 GLY A 243 TYR A 255 1 13 HELIX 16 AB7 THR A 260 ALA A 275 1 16 HELIX 17 AB8 HIS A 276 GLU A 292 1 17 HELIX 18 AB9 HIS A 293 ASP A 303 1 11 HELIX 19 AC1 LEU A 306 GLY A 319 1 14 HELIX 20 AC2 VAL A 349 ASN A 353 1 5 HELIX 21 AC3 ASN A 371 HIS A 375 5 5 HELIX 22 AC4 GLY A 387 LEU A 406 1 20 HELIX 23 AC5 ASP A 435 GLN A 438 5 4 HELIX 24 AC6 ASN A 439 ASP A 444 1 6 HELIX 25 AC7 PRO A 445 LEU A 450 5 6 HELIX 26 AC8 ARG A 460 VAL A 464 5 5 HELIX 27 AC9 GLY A 539 VAL A 548 1 10 HELIX 28 AD1 GLY A 580 GLY A 595 1 16 HELIX 29 AD2 SER A 606 LEU A 610 5 5 HELIX 30 AD3 PHE A 612 GLY A 621 1 10 HELIX 31 AD4 GLU A 630 GLY A 632 5 3 HELIX 32 AD5 ASP A 636 ARG A 643 1 8 HELIX 33 AD6 PRO A 655 GLU A 667 1 13 HELIX 34 AD7 ASP A 687 GLU A 691 5 5 HELIX 35 AD8 THR A 712 TYR A 720 1 9 HELIX 36 AD9 THR A 753 ASN A 760 1 8 SHEET 1 AA1 5 ILE A 59 TYR A 61 0 SHEET 2 AA1 5 TRP A 68 VAL A 70 -1 O VAL A 69 N PHE A 60 SHEET 3 AA1 5 ASN A 344 VAL A 348 1 O LEU A 346 N TRP A 68 SHEET 4 AA1 5 GLY A 323 THR A 328 -1 N TRP A 324 O MET A 347 SHEET 5 AA1 5 PHE A 86 SER A 87 -1 N SER A 87 O ARG A 327 SHEET 1 AA2 3 ARG A 164 ASP A 166 0 SHEET 2 AA2 3 TRP A 431 GLU A 433 -1 O VAL A 432 N ALA A 165 SHEET 3 AA2 3 ARG A 410 LEU A 411 -1 N ARG A 410 O GLU A 433 SHEET 1 AA3 2 VAL A 332 VAL A 334 0 SHEET 2 AA3 2 VAL A 337 LEU A 339 -1 O LEU A 339 N VAL A 332 SHEET 1 AA4 6 SER A 512 SER A 516 0 SHEET 2 AA4 6 HIS A 501 GLU A 505 -1 N ILE A 502 O TYR A 515 SHEET 3 AA4 6 LEU A 553 ARG A 560 -1 O ARG A 557 N ASP A 503 SHEET 4 AA4 6 ARG A 466 SER A 477 -1 N MET A 468 O LEU A 554 SHEET 5 AA4 6 ILE A 480 THR A 486 -1 O THR A 486 N GLU A 469 SHEET 6 AA4 6 TRP A 527 GLN A 532 -1 O TRP A 527 N LEU A 485 SHEET 1 AA5 5 LEU A 624 VAL A 628 0 SHEET 2 AA5 5 ASP A 597 VAL A 604 1 N TYR A 602 O HIS A 625 SHEET 3 AA5 5 ARG A 571 GLY A 577 1 N ALA A 576 O HIS A 601 SHEET 4 AA5 5 THR A 648 GLY A 654 1 O CYS A 653 N GLY A 577 SHEET 5 AA5 5 THR A 673 HIS A 678 1 O THR A 673 N ILE A 650 SHEET 1 AA6 5 LEU A 703 VAL A 707 0 SHEET 2 AA6 5 PHE A 694 LEU A 698 -1 N PHE A 694 O VAL A 707 SHEET 3 AA6 5 ARG A 774 LEU A 777 1 O LEU A 775 N VAL A 697 SHEET 4 AA6 5 GLU A 737 GLU A 742 -1 N VAL A 741 O VAL A 776 SHEET 5 AA6 5 ARG A 762 MET A 764 -1 O MET A 763 N VAL A 738 SHEET 1 AA7 2 VAL A 745 ASP A 746 0 SHEET 2 AA7 2 ARG A 769 ALA A 770 -1 O ARG A 769 N ASP A 746 LINK SG CYS A 385 FE HEM A 800 1555 1555 2.30 LINK SG CYS A 728 FE2 FES A 801 1555 1555 2.36 LINK SG CYS A 733 FE2 FES A 801 1555 1555 2.30 LINK SG CYS A 736 FE1 FES A 801 1555 1555 2.31 LINK SG CYS A 766 FE1 FES A 801 1555 1555 2.26 LINK FE HEM A 800 N1 IMD A 803 1555 1555 2.22 CISPEP 1 GLN A 97 PRO A 98 0 -14.32 CISPEP 2 GLU A 122 PRO A 123 0 0.15 CISPEP 3 GLY A 558 PRO A 559 0 4.53 SITE 1 AC1 21 PHE A 80 LEU A 117 VAL A 118 HIS A 125 SITE 2 AC1 21 ARG A 129 ALA A 275 THR A 278 THR A 279 SITE 3 AC1 21 TRP A 324 ARG A 326 ASN A 377 PHE A 378 SITE 4 AC1 21 GLY A 379 TYR A 380 HIS A 383 CYS A 385 SITE 5 AC1 21 GLY A 387 GLY A 391 IMD A 803 HOH A 951 SITE 6 AC1 21 HOH A1016 SITE 1 AC2 9 ASP A 727 CYS A 728 GLU A 729 GLY A 731 SITE 2 AC2 9 LEU A 732 CYS A 733 GLY A 734 CYS A 736 SITE 3 AC2 9 CYS A 766 SITE 1 AC3 23 ARG A 513 GLN A 514 TYR A 515 SER A 516 SITE 2 AC3 23 ALA A 530 VAL A 531 GLN A 532 SER A 537 SITE 3 AC3 23 ARG A 538 GLY A 539 GLY A 540 SER A 541 SITE 4 AC3 23 ILE A 579 THR A 582 GLU A 677 HIS A 678 SITE 5 AC3 23 PHE A 679 LEU A 732 HOH A 924 HOH A 938 SITE 6 AC3 23 HOH A 950 HOH A 952 HOH A 965 SITE 1 AC4 3 ALA A 274 THR A 278 HEM A 800 SITE 1 AC5 6 THR A 116 LEU A 117 VAL A 118 MET A 267 SITE 2 AC5 6 ALA A 270 HOH A1001 SITE 1 AC6 8 ASP A 45 PRO A 46 ALA A 47 TYR A 317 SITE 2 AC6 8 ALA A 350 HIS A 354 ARG A 425 HOH A 940 SITE 1 AC7 3 ALA A 412 GLU A 413 GLN A 414 SITE 1 AC8 4 THR A 295 ARG A 487 PRO A 492 HOH A 903 SITE 1 AC9 7 SER A 684 HIS A 685 LEU A 686 GLU A 729 SITE 2 AC9 7 CYS A 766 CYS A 767 HOH A 922 SITE 1 AD1 9 ARG A 692 PRO A 693 PHE A 694 ALA A 770 SITE 2 AD1 9 LYS A 771 THR A 772 GLU A 773 HOH A1029 SITE 3 AD1 9 HOH A1090 SITE 1 AD2 5 LEU A 92 TYR A 111 PHE A 113 HIS A 201 SITE 2 AD2 5 ASN A 204 SITE 1 AD3 5 GLN A 438 ARG A 443 HOH A 923 HOH A 970 SITE 2 AD3 5 HOH A1043 SITE 1 AD4 6 ARG A 149 GLU A 400 GLU A 401 ARG A 404 SITE 2 AD4 6 HOH A 930 HOH A1003 SITE 1 AD5 5 GLU A 505 GLY A 507 LEU A 554 ARG A 555 SITE 2 AD5 5 HOH A 981 SITE 1 AD6 7 ARG A 443 GLN A 532 GLY A 578 ILE A 579 SITE 2 AD6 7 PHE A 680 HOH A1059 HOH A1247 SITE 1 AD7 6 LYS A 77 GLU A 374 HIS A 375 TYR A 380 SITE 2 AD7 6 GLN A 384 GLU A 723 SITE 1 AD8 6 ASN A 157 GLU A 192 ARG A 405 GLU A 441 SITE 2 AD8 6 HOH A 915 HOH A 948 SITE 1 AD9 5 ASN A 157 ARG A 191 ARG A 195 HOH A 915 SITE 2 AD9 5 HOH A1112 SITE 1 AE1 7 GLU A 212 GLU A 213 LEU A 215 ALA A 216 SITE 2 AE1 7 HIS A 625 TYR A 627 HOH A 982 SITE 1 AE2 5 ALA A 576 HIS A 601 SER A 603 ASN A 635 SITE 2 AE2 5 LEU A 637 CRYST1 94.715 94.715 242.641 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010558 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010558 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004121 0.00000