HEADER METAL BINDING PROTEIN 14-NOV-19 6LBC TITLE SHRIMP FERRITIN-T158R COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERRITIN; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 EC: 1.16.3.1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PENAEUS JAPONICUS; SOURCE 3 ORGANISM_COMMON: KURUMA PRAWN; SOURCE 4 ORGANISM_TAXID: 27405; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS ARGININE-ARGININE INTERACTION, BIOSYNTHETIC PROTEIN, METAL BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.ZHAO,H.CHEN,T.ZHANG REVDAT 3 22-NOV-23 6LBC 1 REMARK REVDAT 2 09-JUN-21 6LBC 1 JRNL REVDAT 1 25-NOV-20 6LBC 0 JRNL AUTH H.CHEN,T.ZHANG,X.TAN,Y.WANG,Y.LIU,G.ZHAO JRNL TITL CONSTRUCTION OF THERMALLY ROBUST AND POROUS SHRIMP FERRITIN JRNL TITL 2 CRYSTALLINE FOR MOLECULAR ENCAPSULATION THROUGH JRNL TITL 3 INTERMOLECULAR ARGININE-ARGININE ATTRACTIONS. JRNL REF FOOD CHEM V. 349 29089 2021 JRNL REFN ISSN 0308-8146 JRNL PMID 33548881 JRNL DOI 10.1016/J.FOODCHEM.2021.129089 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 123121 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.600 REMARK 3 FREE R VALUE TEST SET COUNT : 1970 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.4600 - 4.3400 0.99 8741 133 0.1983 0.2131 REMARK 3 2 4.3400 - 3.4454 1.00 8677 141 0.1774 0.1863 REMARK 3 3 3.4454 - 3.0101 1.00 8705 143 0.1877 0.2108 REMARK 3 4 3.0101 - 2.7349 1.00 8635 146 0.1931 0.2293 REMARK 3 5 2.7349 - 2.5389 1.00 8637 138 0.1946 0.2500 REMARK 3 6 2.5389 - 2.3893 1.00 8670 141 0.1988 0.2337 REMARK 3 7 2.3893 - 2.2696 1.00 8643 133 0.1936 0.2378 REMARK 3 8 2.2696 - 2.1708 1.00 8704 143 0.1921 0.2060 REMARK 3 9 2.1708 - 2.0873 1.00 8650 146 0.1867 0.2325 REMARK 3 10 2.0873 - 2.0152 1.00 8616 135 0.2000 0.2606 REMARK 3 11 2.0152 - 1.9522 1.00 8628 147 0.2076 0.2511 REMARK 3 12 1.9522 - 1.8964 1.00 8655 139 0.2229 0.2584 REMARK 3 13 1.8964 - 1.8465 1.00 8649 150 0.2254 0.2755 REMARK 3 14 1.8465 - 1.8015 0.99 8541 135 0.2310 0.2701 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.690 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 8350 REMARK 3 ANGLE : 0.770 11233 REMARK 3 CHIRALITY : 0.043 1173 REMARK 3 PLANARITY : 0.005 1497 REMARK 3 DIHEDRAL : 17.927 5107 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6LBC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1300014504. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 123173 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.14800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.92700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 6A4U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.5, 2.0 M AMMONIUM REMARK 280 SULFATE, VAPOR DIFFUSION, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 62.39150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 62.39150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 87.69750 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 62.39150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 62.39150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 87.69750 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 62.39150 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 62.39150 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 87.69750 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 62.39150 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 62.39150 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 87.69750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 24-MERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 24-MERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 92850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 131350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -644.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 249.56600 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 124.78300 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 124.78300 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 -124.78300 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 124.78300 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 396 LIES ON A SPECIAL POSITION. REMARK 375 HOH F 472 LIES ON A SPECIAL POSITION. REMARK 375 HOH F 473 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 465 MET C 1 REMARK 465 MET D 1 REMARK 465 MET E 1 REMARK 465 MET F 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 106 O HOH A 301 1.87 REMARK 500 O HOH A 336 O HOH A 449 1.91 REMARK 500 O HOH A 436 O HOH A 440 1.94 REMARK 500 NE ARG C 60 O HOH C 301 1.95 REMARK 500 OD2 ASP A 102 O HOH A 301 1.98 REMARK 500 O HOH E 322 O HOH E 439 2.05 REMARK 500 O HOH F 395 O HOH F 451 2.08 REMARK 500 O HOH D 416 O HOH D 417 2.09 REMARK 500 O HOH A 305 O HOH A 446 2.10 REMARK 500 O HOH D 340 O HOH D 423 2.10 REMARK 500 O HOH A 384 O HOH A 433 2.10 REMARK 500 O HOH B 378 O HOH B 440 2.11 REMARK 500 O HOH A 396 O HOH A 453 2.11 REMARK 500 O HOH F 331 O HOH F 441 2.11 REMARK 500 O HOH D 461 O HOH D 465 2.12 REMARK 500 OE2 GLU D 54 O HOH D 301 2.12 REMARK 500 O HOH F 424 O HOH F 443 2.12 REMARK 500 O HOH E 325 O HOH E 357 2.12 REMARK 500 OE2 GLU C 133 O HOH C 302 2.13 REMARK 500 O HOH C 329 O HOH C 394 2.13 REMARK 500 O HOH A 383 O HOH A 425 2.14 REMARK 500 O HOH C 388 O HOH C 412 2.14 REMARK 500 O HOH F 381 O HOH F 443 2.14 REMARK 500 OE2 GLU D 137 O HOH D 302 2.15 REMARK 500 O HOH C 420 O HOH C 447 2.15 REMARK 500 O HOH F 433 O HOH F 467 2.15 REMARK 500 O HOH A 413 O HOH A 451 2.15 REMARK 500 O HOH D 453 O HOH D 463 2.16 REMARK 500 OE1 GLN E 109 O HOH E 301 2.16 REMARK 500 O HOH A 377 O HOH A 404 2.16 REMARK 500 O HOH F 468 O HOH F 470 2.16 REMARK 500 O HOH B 329 O HOH B 445 2.16 REMARK 500 OE2 GLU A 137 O HOH A 302 2.16 REMARK 500 O HOH C 402 O HOH C 429 2.17 REMARK 500 O HOH E 408 O HOH E 456 2.17 REMARK 500 O HOH D 455 O HOH D 463 2.17 REMARK 500 OD2 ASP A 102 NE2 GLN A 106 2.18 REMARK 500 O HOH C 437 O HOH C 451 2.19 REMARK 500 O HOH F 441 O HOH F 458 2.19 REMARK 500 OH TYR F 26 O HOH F 301 2.19 REMARK 500 O HOH E 377 O HOH E 464 2.19 REMARK 500 O HOH F 445 O HOH F 456 2.19 REMARK 500 O HOH F 313 O HOH F 423 2.19 REMARK 500 O HOH D 311 O HOH D 366 2.19 REMARK 500 O HOH F 459 O HOH F 471 2.19 REMARK 500 O HOH A 426 O HOH A 452 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 307 O HOH A 409 2585 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 134 -53.75 -135.11 REMARK 500 VAL B 43 -62.02 -124.24 REMARK 500 TYR B 134 -56.75 -130.05 REMARK 500 TYR C 134 -59.08 -130.24 REMARK 500 VAL D 43 -61.64 -121.34 REMARK 500 TYR D 134 -54.96 -127.66 REMARK 500 VAL E 43 -61.60 -124.68 REMARK 500 TYR E 134 -54.25 -128.10 REMARK 500 GLN F 7 119.74 -162.86 REMARK 500 TYR F 134 -54.91 -132.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 457 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH C 454 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH C 455 DISTANCE = 6.82 ANGSTROMS REMARK 525 HOH D 465 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH E 471 DISTANCE = 6.66 ANGSTROMS REMARK 525 HOH F 471 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH F 472 DISTANCE = 6.43 ANGSTROMS REMARK 525 HOH F 473 DISTANCE = 7.22 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 24 OE1 REMARK 620 2 GLU A 59 OE1 80.2 REMARK 620 3 HIS A 62 ND1 120.0 110.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 24 OE1 REMARK 620 2 GLU B 59 OE1 82.1 REMARK 620 3 HIS B 62 ND1 113.6 108.7 REMARK 620 4 HOH B 351 O 97.5 140.5 107.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE C 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 24 OE1 REMARK 620 2 GLU C 59 OE1 83.7 REMARK 620 3 HIS C 62 ND1 116.0 113.5 REMARK 620 4 HOH C 379 O 90.4 134.8 109.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE D 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 24 OE1 REMARK 620 2 GLU D 59 OE1 87.5 REMARK 620 3 HIS D 62 ND1 113.5 113.9 REMARK 620 4 HOH D 307 O 142.2 80.6 104.1 REMARK 620 5 HOH D 366 O 93.6 143.9 98.7 76.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE E 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU E 24 OE1 REMARK 620 2 GLU E 59 OE1 85.4 REMARK 620 3 HIS E 62 ND1 114.7 118.0 REMARK 620 4 HOH E 325 O 127.0 77.6 117.7 REMARK 620 5 HOH E 374 O 83.6 140.1 101.5 78.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE F 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU F 24 OE1 REMARK 620 2 GLU F 59 OE1 79.6 REMARK 620 3 HIS F 62 ND1 116.7 103.1 REMARK 620 4 HOH F 344 O 96.8 143.6 110.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE E 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE F 201 DBREF 6LBC A 1 170 UNP T2B7E1 T2B7E1_PENJP 1 170 DBREF 6LBC B 1 170 UNP T2B7E1 T2B7E1_PENJP 1 170 DBREF 6LBC C 1 170 UNP T2B7E1 T2B7E1_PENJP 1 170 DBREF 6LBC D 1 170 UNP T2B7E1 T2B7E1_PENJP 1 170 DBREF 6LBC E 1 170 UNP T2B7E1 T2B7E1_PENJP 1 170 DBREF 6LBC F 1 170 UNP T2B7E1 T2B7E1_PENJP 1 170 SEQADV 6LBC ARG A 158 UNP T2B7E1 THR 158 ENGINEERED MUTATION SEQADV 6LBC ARG B 158 UNP T2B7E1 THR 158 ENGINEERED MUTATION SEQADV 6LBC ARG C 158 UNP T2B7E1 THR 158 ENGINEERED MUTATION SEQADV 6LBC ARG D 158 UNP T2B7E1 THR 158 ENGINEERED MUTATION SEQADV 6LBC ARG E 158 UNP T2B7E1 THR 158 ENGINEERED MUTATION SEQADV 6LBC ARG F 158 UNP T2B7E1 THR 158 ENGINEERED MUTATION SEQRES 1 A 170 MET ALA SER GLN VAL ARG GLN ASN TYR HIS GLU ASP CYS SEQRES 2 A 170 GLU ALA SER ILE ASN LYS GLN ILE ASN MET GLU LEU TYR SEQRES 3 A 170 ALA SER TYR VAL TYR LEU SER MET ALA TYR TYR PHE GLU SEQRES 4 A 170 ARG ASP ASP VAL ALA LEU PRO GLY PHE ALA LYS PHE PHE SEQRES 5 A 170 LYS GLU SER SER ASP GLU GLU ARG GLU HIS ALA GLN THR SEQRES 6 A 170 PHE MET LYS TYR GLN ASN LYS ARG GLY GLY ARG ILE VAL SEQRES 7 A 170 LEU GLN GLN ILE ALA ALA PRO SER MET GLN GLU TRP GLY SEQRES 8 A 170 THR GLY LEU GLU ALA LEU GLN ALA ALA LEU ASP LEU GLU SEQRES 9 A 170 LYS GLN VAL ASN GLN SER LEU LEU GLU LEU HIS SER THR SEQRES 10 A 170 ALA SER GLY ASN ASN ASP PRO HIS LEU THR LYS LEU LEU SEQRES 11 A 170 GLU ASP GLU TYR LEU GLU GLU GLN VAL ASP SER ILE LYS SEQRES 12 A 170 LYS ILE GLY ASP MET ILE THR LYS LEU LYS ARG ALA GLY SEQRES 13 A 170 PRO ARG GLY LEU GLY GLU TYR MET PHE ASP LYS GLU LEU SEQRES 14 A 170 ASN SEQRES 1 B 170 MET ALA SER GLN VAL ARG GLN ASN TYR HIS GLU ASP CYS SEQRES 2 B 170 GLU ALA SER ILE ASN LYS GLN ILE ASN MET GLU LEU TYR SEQRES 3 B 170 ALA SER TYR VAL TYR LEU SER MET ALA TYR TYR PHE GLU SEQRES 4 B 170 ARG ASP ASP VAL ALA LEU PRO GLY PHE ALA LYS PHE PHE SEQRES 5 B 170 LYS GLU SER SER ASP GLU GLU ARG GLU HIS ALA GLN THR SEQRES 6 B 170 PHE MET LYS TYR GLN ASN LYS ARG GLY GLY ARG ILE VAL SEQRES 7 B 170 LEU GLN GLN ILE ALA ALA PRO SER MET GLN GLU TRP GLY SEQRES 8 B 170 THR GLY LEU GLU ALA LEU GLN ALA ALA LEU ASP LEU GLU SEQRES 9 B 170 LYS GLN VAL ASN GLN SER LEU LEU GLU LEU HIS SER THR SEQRES 10 B 170 ALA SER GLY ASN ASN ASP PRO HIS LEU THR LYS LEU LEU SEQRES 11 B 170 GLU ASP GLU TYR LEU GLU GLU GLN VAL ASP SER ILE LYS SEQRES 12 B 170 LYS ILE GLY ASP MET ILE THR LYS LEU LYS ARG ALA GLY SEQRES 13 B 170 PRO ARG GLY LEU GLY GLU TYR MET PHE ASP LYS GLU LEU SEQRES 14 B 170 ASN SEQRES 1 C 170 MET ALA SER GLN VAL ARG GLN ASN TYR HIS GLU ASP CYS SEQRES 2 C 170 GLU ALA SER ILE ASN LYS GLN ILE ASN MET GLU LEU TYR SEQRES 3 C 170 ALA SER TYR VAL TYR LEU SER MET ALA TYR TYR PHE GLU SEQRES 4 C 170 ARG ASP ASP VAL ALA LEU PRO GLY PHE ALA LYS PHE PHE SEQRES 5 C 170 LYS GLU SER SER ASP GLU GLU ARG GLU HIS ALA GLN THR SEQRES 6 C 170 PHE MET LYS TYR GLN ASN LYS ARG GLY GLY ARG ILE VAL SEQRES 7 C 170 LEU GLN GLN ILE ALA ALA PRO SER MET GLN GLU TRP GLY SEQRES 8 C 170 THR GLY LEU GLU ALA LEU GLN ALA ALA LEU ASP LEU GLU SEQRES 9 C 170 LYS GLN VAL ASN GLN SER LEU LEU GLU LEU HIS SER THR SEQRES 10 C 170 ALA SER GLY ASN ASN ASP PRO HIS LEU THR LYS LEU LEU SEQRES 11 C 170 GLU ASP GLU TYR LEU GLU GLU GLN VAL ASP SER ILE LYS SEQRES 12 C 170 LYS ILE GLY ASP MET ILE THR LYS LEU LYS ARG ALA GLY SEQRES 13 C 170 PRO ARG GLY LEU GLY GLU TYR MET PHE ASP LYS GLU LEU SEQRES 14 C 170 ASN SEQRES 1 D 170 MET ALA SER GLN VAL ARG GLN ASN TYR HIS GLU ASP CYS SEQRES 2 D 170 GLU ALA SER ILE ASN LYS GLN ILE ASN MET GLU LEU TYR SEQRES 3 D 170 ALA SER TYR VAL TYR LEU SER MET ALA TYR TYR PHE GLU SEQRES 4 D 170 ARG ASP ASP VAL ALA LEU PRO GLY PHE ALA LYS PHE PHE SEQRES 5 D 170 LYS GLU SER SER ASP GLU GLU ARG GLU HIS ALA GLN THR SEQRES 6 D 170 PHE MET LYS TYR GLN ASN LYS ARG GLY GLY ARG ILE VAL SEQRES 7 D 170 LEU GLN GLN ILE ALA ALA PRO SER MET GLN GLU TRP GLY SEQRES 8 D 170 THR GLY LEU GLU ALA LEU GLN ALA ALA LEU ASP LEU GLU SEQRES 9 D 170 LYS GLN VAL ASN GLN SER LEU LEU GLU LEU HIS SER THR SEQRES 10 D 170 ALA SER GLY ASN ASN ASP PRO HIS LEU THR LYS LEU LEU SEQRES 11 D 170 GLU ASP GLU TYR LEU GLU GLU GLN VAL ASP SER ILE LYS SEQRES 12 D 170 LYS ILE GLY ASP MET ILE THR LYS LEU LYS ARG ALA GLY SEQRES 13 D 170 PRO ARG GLY LEU GLY GLU TYR MET PHE ASP LYS GLU LEU SEQRES 14 D 170 ASN SEQRES 1 E 170 MET ALA SER GLN VAL ARG GLN ASN TYR HIS GLU ASP CYS SEQRES 2 E 170 GLU ALA SER ILE ASN LYS GLN ILE ASN MET GLU LEU TYR SEQRES 3 E 170 ALA SER TYR VAL TYR LEU SER MET ALA TYR TYR PHE GLU SEQRES 4 E 170 ARG ASP ASP VAL ALA LEU PRO GLY PHE ALA LYS PHE PHE SEQRES 5 E 170 LYS GLU SER SER ASP GLU GLU ARG GLU HIS ALA GLN THR SEQRES 6 E 170 PHE MET LYS TYR GLN ASN LYS ARG GLY GLY ARG ILE VAL SEQRES 7 E 170 LEU GLN GLN ILE ALA ALA PRO SER MET GLN GLU TRP GLY SEQRES 8 E 170 THR GLY LEU GLU ALA LEU GLN ALA ALA LEU ASP LEU GLU SEQRES 9 E 170 LYS GLN VAL ASN GLN SER LEU LEU GLU LEU HIS SER THR SEQRES 10 E 170 ALA SER GLY ASN ASN ASP PRO HIS LEU THR LYS LEU LEU SEQRES 11 E 170 GLU ASP GLU TYR LEU GLU GLU GLN VAL ASP SER ILE LYS SEQRES 12 E 170 LYS ILE GLY ASP MET ILE THR LYS LEU LYS ARG ALA GLY SEQRES 13 E 170 PRO ARG GLY LEU GLY GLU TYR MET PHE ASP LYS GLU LEU SEQRES 14 E 170 ASN SEQRES 1 F 170 MET ALA SER GLN VAL ARG GLN ASN TYR HIS GLU ASP CYS SEQRES 2 F 170 GLU ALA SER ILE ASN LYS GLN ILE ASN MET GLU LEU TYR SEQRES 3 F 170 ALA SER TYR VAL TYR LEU SER MET ALA TYR TYR PHE GLU SEQRES 4 F 170 ARG ASP ASP VAL ALA LEU PRO GLY PHE ALA LYS PHE PHE SEQRES 5 F 170 LYS GLU SER SER ASP GLU GLU ARG GLU HIS ALA GLN THR SEQRES 6 F 170 PHE MET LYS TYR GLN ASN LYS ARG GLY GLY ARG ILE VAL SEQRES 7 F 170 LEU GLN GLN ILE ALA ALA PRO SER MET GLN GLU TRP GLY SEQRES 8 F 170 THR GLY LEU GLU ALA LEU GLN ALA ALA LEU ASP LEU GLU SEQRES 9 F 170 LYS GLN VAL ASN GLN SER LEU LEU GLU LEU HIS SER THR SEQRES 10 F 170 ALA SER GLY ASN ASN ASP PRO HIS LEU THR LYS LEU LEU SEQRES 11 F 170 GLU ASP GLU TYR LEU GLU GLU GLN VAL ASP SER ILE LYS SEQRES 12 F 170 LYS ILE GLY ASP MET ILE THR LYS LEU LYS ARG ALA GLY SEQRES 13 F 170 PRO ARG GLY LEU GLY GLU TYR MET PHE ASP LYS GLU LEU SEQRES 14 F 170 ASN HET FE A 201 1 HET FE B 201 1 HET FE C 201 1 HET FE D 201 1 HET FE E 201 1 HET FE F 201 1 HETNAM FE FE (III) ION FORMUL 7 FE 6(FE 3+) FORMUL 13 HOH *978(H2 O) HELIX 1 AA1 HIS A 10 PHE A 38 1 29 HELIX 2 AA2 LEU A 45 GLY A 74 1 30 HELIX 3 AA3 THR A 92 ASN A 121 1 30 HELIX 4 AA4 ASP A 123 TYR A 134 1 12 HELIX 5 AA5 TYR A 134 GLY A 156 1 23 HELIX 6 AA6 GLY A 159 ASN A 170 1 12 HELIX 7 AA7 HIS B 10 PHE B 38 1 29 HELIX 8 AA8 LEU B 45 GLY B 74 1 30 HELIX 9 AA9 THR B 92 ASN B 121 1 30 HELIX 10 AB1 ASP B 123 TYR B 134 1 12 HELIX 11 AB2 TYR B 134 GLY B 156 1 23 HELIX 12 AB3 GLY B 159 LYS B 167 1 9 HELIX 13 AB4 GLU B 168 ASN B 170 5 3 HELIX 14 AB5 HIS C 10 PHE C 38 1 29 HELIX 15 AB6 LEU C 45 GLY C 74 1 30 HELIX 16 AB7 THR C 92 ASN C 121 1 30 HELIX 17 AB8 ASP C 123 TYR C 134 1 12 HELIX 18 AB9 TYR C 134 GLY C 156 1 23 HELIX 19 AC1 GLY C 159 LEU C 169 1 11 HELIX 20 AC2 HIS D 10 PHE D 38 1 29 HELIX 21 AC3 LEU D 45 GLY D 74 1 30 HELIX 22 AC4 THR D 92 ASN D 121 1 30 HELIX 23 AC5 ASP D 123 TYR D 134 1 12 HELIX 24 AC6 TYR D 134 GLY D 156 1 23 HELIX 25 AC7 GLY D 159 ASN D 170 1 12 HELIX 26 AC8 HIS E 10 PHE E 38 1 29 HELIX 27 AC9 LEU E 45 GLY E 74 1 30 HELIX 28 AD1 THR E 92 ASN E 121 1 30 HELIX 29 AD2 ASP E 123 TYR E 134 1 12 HELIX 30 AD3 TYR E 134 GLY E 156 1 23 HELIX 31 AD4 GLY E 159 ASN E 170 1 12 HELIX 32 AD5 HIS F 10 PHE F 38 1 29 HELIX 33 AD6 LEU F 45 GLY F 74 1 30 HELIX 34 AD7 THR F 92 ASN F 121 1 30 HELIX 35 AD8 ASP F 123 TYR F 134 1 12 HELIX 36 AD9 TYR F 134 GLY F 156 1 23 HELIX 37 AE1 GLY F 159 LEU F 169 1 11 LINK OE1 GLU A 24 FE FE A 201 1555 1555 2.11 LINK OE1 GLU A 59 FE FE A 201 1555 1555 2.11 LINK ND1 HIS A 62 FE FE A 201 1555 1555 2.32 LINK OE1 GLU B 24 FE FE B 201 1555 1555 2.05 LINK OE1 GLU B 59 FE FE B 201 1555 1555 2.20 LINK ND1 HIS B 62 FE FE B 201 1555 1555 2.33 LINK FE FE B 201 O HOH B 351 1555 1555 2.01 LINK OE1 GLU C 24 FE FE C 201 1555 1555 2.14 LINK OE1 GLU C 59 FE FE C 201 1555 1555 2.13 LINK ND1 HIS C 62 FE FE C 201 1555 1555 2.17 LINK FE FE C 201 O HOH C 379 1555 1555 2.34 LINK OE1 GLU D 24 FE FE D 201 1555 1555 1.99 LINK OE1 GLU D 59 FE FE D 201 1555 1555 2.14 LINK ND1 HIS D 62 FE FE D 201 1555 1555 2.46 LINK FE FE D 201 O HOH D 307 1555 1555 2.40 LINK FE FE D 201 O HOH D 366 1555 1555 2.28 LINK OE1 GLU E 24 FE FE E 201 1555 1555 2.02 LINK OE1 GLU E 59 FE FE E 201 1555 1555 2.12 LINK ND1 HIS E 62 FE FE E 201 1555 1555 2.39 LINK FE FE E 201 O HOH E 325 1555 1555 2.51 LINK FE FE E 201 O HOH E 374 1555 1555 2.28 LINK OE1 GLU F 24 FE FE F 201 1555 1555 2.06 LINK OE1 GLU F 59 FE FE F 201 1555 1555 2.15 LINK ND1 HIS F 62 FE FE F 201 1555 1555 2.40 LINK FE FE F 201 O HOH F 344 1555 1555 2.33 CISPEP 1 GLY A 156 PRO A 157 0 3.91 CISPEP 2 GLY B 156 PRO B 157 0 -2.34 CISPEP 3 GLY C 156 PRO C 157 0 8.06 CISPEP 4 GLY D 156 PRO D 157 0 5.95 CISPEP 5 GLY E 156 PRO E 157 0 2.82 CISPEP 6 GLY F 156 PRO F 157 0 4.54 SITE 1 AC1 3 GLU A 24 GLU A 59 HIS A 62 SITE 1 AC2 4 GLU B 24 GLU B 59 HIS B 62 HOH B 351 SITE 1 AC3 4 GLU C 24 GLU C 59 HIS C 62 HOH C 379 SITE 1 AC4 5 GLU D 24 GLU D 59 HIS D 62 HOH D 307 SITE 2 AC4 5 HOH D 366 SITE 1 AC5 5 GLU E 24 GLU E 59 HIS E 62 HOH E 325 SITE 2 AC5 5 HOH E 374 SITE 1 AC6 4 GLU F 24 GLU F 59 HIS F 62 HOH F 344 CRYST1 124.783 124.783 175.395 90.00 90.00 90.00 I 4 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008014 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008014 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005701 0.00000