HEADER DNA BINDING PROTEIN 14-NOV-19 6LBT TITLE CRYSTAL STRUCTURE OF YEAST CDC13 AND STN1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: KLLA0F20922P,KLLA0F20922P; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CDC13,CDC13; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: KLLA0C11825P; COMPND 8 CHAIN: C, D; COMPND 9 SYNONYM: STN1; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLUYVEROMYCES LACTIS; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 28985; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: KLUYVEROMYCES LACTIS; SOURCE 12 ORGANISM_COMMON: YEAST; SOURCE 13 ORGANISM_TAXID: 28985; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS TELOMERE, CST COMPLEX, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.GE,Z.WU,J.WU,M.LEI REVDAT 4 22-NOV-23 6LBT 1 REMARK REVDAT 3 19-AUG-20 6LBT 1 JRNL REVDAT 2 29-JUL-20 6LBT 1 JRNL REVDAT 1 15-JUL-20 6LBT 0 JRNL AUTH Y.GE,Z.WU,H.CHEN,Q.ZHONG,S.SHI,G.LI,J.WU,M.LEI JRNL TITL STRUCTURAL INSIGHTS INTO TELOMERE PROTECTION AND HOMEOSTASIS JRNL TITL 2 REGULATION BY YEAST CST COMPLEX. JRNL REF NAT.STRUCT.MOL.BIOL. V. 27 752 2020 JRNL REFN ESSN 1545-9985 JRNL PMID 32661422 JRNL DOI 10.1038/S41594-020-0459-8 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15_3459 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.21 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 33028 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 1624 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.2000 - 5.9445 0.98 2783 119 0.1937 0.2071 REMARK 3 2 5.9445 - 4.7216 1.00 2664 134 0.1799 0.2071 REMARK 3 3 4.7216 - 4.1257 1.00 2659 131 0.1718 0.2146 REMARK 3 4 4.1257 - 3.7489 1.00 2628 130 0.2096 0.2557 REMARK 3 5 3.7489 - 3.4805 1.00 2637 132 0.2175 0.2635 REMARK 3 6 3.4805 - 3.2754 1.00 2583 132 0.2258 0.2609 REMARK 3 7 3.2754 - 3.1115 1.00 2580 155 0.2750 0.3946 REMARK 3 8 3.1115 - 2.9761 1.00 2574 137 0.2789 0.3030 REMARK 3 9 2.9761 - 2.8616 1.00 2591 134 0.2813 0.3299 REMARK 3 10 2.8616 - 2.7628 1.00 2588 131 0.2800 0.3326 REMARK 3 11 2.7628 - 2.6765 1.00 2544 153 0.3156 0.3496 REMARK 3 12 2.6765 - 2.6000 1.00 2573 136 0.3276 0.3375 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.880 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 374:891 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.782 7.964 -41.452 REMARK 3 T TENSOR REMARK 3 T11: 0.2900 T22: 0.2973 REMARK 3 T33: 0.3486 T12: -0.0042 REMARK 3 T13: 0.0060 T23: -0.0211 REMARK 3 L TENSOR REMARK 3 L11: 0.5407 L22: 0.7696 REMARK 3 L33: 2.0231 L12: -0.1756 REMARK 3 L13: -0.5155 L23: -0.3416 REMARK 3 S TENSOR REMARK 3 S11: -0.0106 S12: 0.0788 S13: -0.0062 REMARK 3 S21: 0.0294 S22: 0.0347 S23: -0.0234 REMARK 3 S31: 0.0162 S32: 0.0567 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN C AND RESID 274:434 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.233 2.011 1.831 REMARK 3 T TENSOR REMARK 3 T11: 0.3708 T22: 0.4039 REMARK 3 T33: 0.3569 T12: -0.0102 REMARK 3 T13: -0.0152 T23: 0.0543 REMARK 3 L TENSOR REMARK 3 L11: 0.4445 L22: 0.8743 REMARK 3 L33: 1.3309 L12: -0.1217 REMARK 3 L13: -0.0838 L23: -0.5874 REMARK 3 S TENSOR REMARK 3 S11: -0.0121 S12: -0.1227 S13: -0.0366 REMARK 3 S21: -0.1728 S22: -0.0076 S23: -0.0036 REMARK 3 S31: 0.0315 S32: 0.1662 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN B AND RESID 374:892 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.431 35.334 9.299 REMARK 3 T TENSOR REMARK 3 T11: 0.3649 T22: 0.3486 REMARK 3 T33: 0.3885 T12: 0.0261 REMARK 3 T13: 0.0168 T23: -0.0398 REMARK 3 L TENSOR REMARK 3 L11: 0.8206 L22: 1.0064 REMARK 3 L33: 1.6107 L12: -0.1098 REMARK 3 L13: 0.3399 L23: -0.3324 REMARK 3 S TENSOR REMARK 3 S11: -0.0049 S12: -0.0770 S13: 0.0956 REMARK 3 S21: 0.0866 S22: 0.1008 S23: -0.1076 REMARK 3 S31: 0.0118 S32: -0.0230 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN D AND RESID 274:434 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.566 39.902 -33.496 REMARK 3 T TENSOR REMARK 3 T11: 0.3907 T22: 0.3758 REMARK 3 T33: 0.3670 T12: 0.0609 REMARK 3 T13: 0.0193 T23: 0.0595 REMARK 3 L TENSOR REMARK 3 L11: 0.4145 L22: 0.8276 REMARK 3 L33: 0.9746 L12: 0.4567 REMARK 3 L13: -0.5440 L23: -0.1238 REMARK 3 S TENSOR REMARK 3 S11: -0.0209 S12: -0.0280 S13: -0.0466 REMARK 3 S21: -0.0331 S22: -0.0658 S23: 0.0433 REMARK 3 S31: -0.0090 S32: 0.0468 S33: -0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 1001:1001 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.220 2.743 -30.501 REMARK 3 T TENSOR REMARK 3 T11: 0.5143 T22: 0.8211 REMARK 3 T33: 0.5888 T12: 0.0584 REMARK 3 T13: 0.2796 T23: 0.1907 REMARK 3 L TENSOR REMARK 3 L11: 2.0007 L22: 2.0004 REMARK 3 L33: 2.0000 L12: 1.9995 REMARK 3 L13: 1.9996 L23: 2.0005 REMARK 3 S TENSOR REMARK 3 S11: 0.1914 S12: 0.4173 S13: 0.6468 REMARK 3 S21: -0.2569 S22: 0.1563 S23: 0.5502 REMARK 3 S31: -6.2239 S32: 1.5187 S33: -0.2824 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 1101:1102 ) OR ( CHAIN C AND REMARK 3 RESID 501:502 ) OR ( CHAIN B AND RESID 1001:1008 ) REMARK 3 OR ( CHAIN D AND RESID 501:503 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.240 32.551 -1.532 REMARK 3 T TENSOR REMARK 3 T11: 0.2336 T22: 0.4250 REMARK 3 T33: 0.5449 T12: -0.0824 REMARK 3 T13: 0.1048 T23: 0.0903 REMARK 3 L TENSOR REMARK 3 L11: -0.2229 L22: 0.1523 REMARK 3 L33: -0.0978 L12: -0.1315 REMARK 3 L13: -0.1432 L23: -0.2353 REMARK 3 S TENSOR REMARK 3 S11: -0.1279 S12: 0.1381 S13: -0.0174 REMARK 3 S21: 0.0936 S22: 0.0733 S23: 0.1345 REMARK 3 S31: -0.2324 S32: -0.0280 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6LBT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1300013881. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97853 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33308 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.90 REMARK 200 R MERGE (I) : 0.11900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.70 REMARK 200 R MERGE FOR SHELL (I) : 0.86300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 6LBR, 6LBS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.225 M AMMONIUM CITRATE TRIBASIC, 12% REMARK 280 PEG3350, PH 7.0, EVAPORATION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.48550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.69650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.28850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.69650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.48550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.28850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 724 REMARK 465 GLY A 805 REMARK 465 MET A 806 REMARK 465 VAL A 807 REMARK 465 GLY A 808 REMARK 465 THR A 809 REMARK 465 GLN A 810 REMARK 465 CYS A 811 REMARK 465 GLU A 892 REMARK 465 TYR A 893 REMARK 465 ASP A 894 REMARK 465 ASN A 895 REMARK 465 ASP A 896 REMARK 465 THR A 897 REMARK 465 LEU A 898 REMARK 465 LYS A 899 REMARK 465 TYR A 900 REMARK 465 GLU A 901 REMARK 465 ASN A 902 REMARK 465 LEU A 903 REMARK 465 SER A 904 REMARK 465 ASP A 905 REMARK 465 ILE A 906 REMARK 465 ASP A 907 REMARK 465 ARG C 270 REMARK 465 SER C 271 REMARK 465 SER C 272 REMARK 465 LYS C 273 REMARK 465 PRO C 310 REMARK 465 GLY C 311 REMARK 465 GLY C 312 REMARK 465 GLU C 313 REMARK 465 ALA C 314 REMARK 465 THR C 315 REMARK 465 ASP C 316 REMARK 465 LEU C 317 REMARK 465 LYS C 318 REMARK 465 THR C 319 REMARK 465 LYS C 435 REMARK 465 ALA B 723 REMARK 465 TYR B 893 REMARK 465 ASP B 894 REMARK 465 ASN B 895 REMARK 465 ASP B 896 REMARK 465 THR B 897 REMARK 465 LEU B 898 REMARK 465 LYS B 899 REMARK 465 TYR B 900 REMARK 465 GLU B 901 REMARK 465 ASN B 902 REMARK 465 LEU B 903 REMARK 465 SER B 904 REMARK 465 ASP B 905 REMARK 465 ILE B 906 REMARK 465 ASP B 907 REMARK 465 ARG D 270 REMARK 465 SER D 271 REMARK 465 SER D 272 REMARK 465 LYS D 273 REMARK 465 PRO D 310 REMARK 465 GLY D 311 REMARK 465 GLY D 312 REMARK 465 GLU D 313 REMARK 465 ALA D 314 REMARK 465 THR D 315 REMARK 465 ASP D 316 REMARK 465 LEU D 317 REMARK 465 LYS D 318 REMARK 465 THR D 319 REMARK 465 LYS D 435 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 408 156.81 73.49 REMARK 500 ASP A 415 -7.70 71.50 REMARK 500 SER A 430 -162.16 -169.64 REMARK 500 GLU A 436 -0.92 67.47 REMARK 500 TYR A 437 -74.87 -114.96 REMARK 500 HIS A 778 76.62 66.42 REMARK 500 VAL C 322 -66.77 -131.36 REMARK 500 LEU C 323 -13.59 90.23 REMARK 500 ILE C 413 -22.35 -142.40 REMARK 500 GLU B 408 151.97 71.67 REMARK 500 ASP B 415 -29.57 75.53 REMARK 500 PHE B 416 58.86 -99.52 REMARK 500 SER B 430 -178.94 -170.59 REMARK 500 TYR B 437 -73.58 -124.75 REMARK 500 ASN B 761 79.90 50.96 REMARK 500 HIS B 778 63.75 62.38 REMARK 500 ILE B 790 96.27 -164.12 REMARK 500 THR B 809 21.99 -141.44 REMARK 500 ILE D 413 -14.01 -143.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6LBS RELATED DB: PDB DBREF 6LBT A 374 508 UNP Q6CJ70 Q6CJ70_KLULA 374 508 DBREF 6LBT A 728 907 UNP Q6CJ70 Q6CJ70_KLULA 728 907 DBREF 6LBT C 270 435 UNP Q6CTL1 Q6CTL1_KLULA 270 435 DBREF 6LBT B 374 723 UNP Q6CJ70 Q6CJ70_KLULA 374 508 DBREF 6LBT B 728 907 UNP Q6CJ70 Q6CJ70_KLULA 728 907 DBREF 6LBT D 270 435 UNP Q6CTL1 Q6CTL1_KLULA 270 435 SEQADV 6LBT GLY A 724 UNP Q6CJ70 LINKER SEQADV 6LBT SER A 725 UNP Q6CJ70 LINKER SEQADV 6LBT GLY A 726 UNP Q6CJ70 LINKER SEQADV 6LBT SER A 727 UNP Q6CJ70 LINKER SEQADV 6LBT GLY B 724 UNP Q6CJ70 LINKER SEQADV 6LBT SER B 725 UNP Q6CJ70 LINKER SEQADV 6LBT GLY B 726 UNP Q6CJ70 LINKER SEQADV 6LBT SER B 727 UNP Q6CJ70 LINKER SEQRES 1 A 319 ASP LEU LYS PRO ASP SER ILE SER LYS ALA ILE THR ASP SEQRES 2 A 319 ARG LEU TYR HIS ILE SER ASP GLY LYS ILE LEU GLY PHE SEQRES 3 A 319 ILE PRO ASN GLN TYR LEU ASP PRO GLU SER SER LEU ILE SEQRES 4 A 319 GLU ASP ASP PHE LEU LEU ILE TYR VAL TYR THR TYR GLU SEQRES 5 A 319 LEU PRO LEU LEU SER ALA VAL PHE VAL PRO GLU TYR ASN SEQRES 6 A 319 CYS TYR GLU ILE ALA ILE THR ASN VAL ALA LYS PHE PHE SEQRES 7 A 319 SER LYS ILE GLY VAL ARG SER TYR PRO HIS SER ILE LYS SEQRES 8 A 319 ASN SER LEU LEU GLU LEU LYS GLU LEU ILE ASP ASN ASN SEQRES 9 A 319 ARG TYR ASP ILE THR ILE TYR LYS LYS GLU PHE THR ILE SEQRES 10 A 319 GLY ALA ALA LYS SER SER LYS TRP ALA LEU LYS ASP VAL SEQRES 11 A 319 VAL LEU ARG SER ALA GLY SER GLY SER ASP SER ILE ALA SEQRES 12 A 319 LYS LEU GLU ASN GLN LEU LYS ARG GLU GLY VAL ASP LYS SEQRES 13 A 319 ILE GLU GLU ASP ALA ALA THR ARG PRO ILE GLU LEU PHE SEQRES 14 A 319 GLY THR ARG ASN PRO LYS THR VAL ASP ILE ILE ASP ILE SEQRES 15 A 319 LYS ASN ASN VAL GLN MET ASP HIS LYS ASP ILE LYS VAL SEQRES 16 A 319 THR ALA LYS ILE LEU SER ILE PHE ASP ASN GLY ASN ASN SEQRES 17 A 319 VAL THR ILE TYR LEU THR ARG SER GLY MET VAL GLY THR SEQRES 18 A 319 GLN CYS THR ILE GLU ASN PRO PHE GLU GLU LEU LEU LYS SEQRES 19 A 319 VAL GLN ILE TRP GLY ARG GLN ASN LEU THR LEU PHE PHE SEQRES 20 A 319 GLY ASN PRO ASN TYR SER TYR LYS ARG GLU GLU LEU THR SEQRES 21 A 319 ALA CYS ILE GLY SER ILE VAL ASP PHE THR LEU ILE PRO SEQRES 22 A 319 ARG VAL LEU ARG VAL ASN GLU TYR LEU TYR ILE LYS ILE SEQRES 23 A 319 TRP CYS PRO ILE TYR ALA THR LEU GLU SER LEU LEU ILE SEQRES 24 A 319 HIS SER ARG LEU GLU TYR ASP ASN ASP THR LEU LYS TYR SEQRES 25 A 319 GLU ASN LEU SER ASP ILE ASP SEQRES 1 C 166 ARG SER SER LYS LEU SER PRO LYS GLN MET LYS ARG GLU SEQRES 2 C 166 ILE LEU GLY VAL LEU ILE GLU LYS SER MET GLU SER LYS SEQRES 3 C 166 VAL CYS LYS ILE TYR GLU PRO LEU LEU SER ILE ASN LEU SEQRES 4 C 166 GLY PRO GLY GLY GLU ALA THR ASP LEU LYS THR GLU PRO SEQRES 5 C 166 VAL LEU HIS LEU LYS PHE TYR GLU THR PHE LEU ALA GLN SEQRES 6 C 166 LEU ALA GLU MET ALA ILE ILE THR LEU ASP SER PHE THR SEQRES 7 C 166 ILE ASN MET THR ASN LEU HIS ASN CYS TYR ARG TYR ILE SEQRES 8 C 166 ILE THR ARG PHE GLN SER LEU ILE ASN VAL GLN ILE PRO SEQRES 9 C 166 GLN ILE THR ILE LYS TYR SER GLU ILE ARG ASN PHE CYS SEQRES 10 C 166 LYS LEU PRO LEU LEU SER LYS LYS LEU ILE LEU GLN MET SEQRES 11 C 166 CYS LYS HIS PHE LEU ASN THR THR HIS ILE GLY ASN LEU SEQRES 12 C 166 ILE ASP TRP TRP VAL ASP PRO THR SER GLU GLU ARG TYR SEQRES 13 C 166 LYS VAL PHE PHE THR TYR SER LYS SER LYS SEQRES 1 B 319 ASP LEU LYS PRO ASP SER ILE SER LYS ALA ILE THR ASP SEQRES 2 B 319 ARG LEU TYR HIS ILE SER ASP GLY LYS ILE LEU GLY PHE SEQRES 3 B 319 ILE PRO ASN GLN TYR LEU ASP PRO GLU SER SER LEU ILE SEQRES 4 B 319 GLU ASP ASP PHE LEU LEU ILE TYR VAL TYR THR TYR GLU SEQRES 5 B 319 LEU PRO LEU LEU SER ALA VAL PHE VAL PRO GLU TYR ASN SEQRES 6 B 319 CYS TYR GLU ILE ALA ILE THR ASN VAL ALA LYS PHE PHE SEQRES 7 B 319 SER LYS ILE GLY VAL ARG SER TYR PRO HIS SER ILE LYS SEQRES 8 B 319 ASN SER LEU LEU GLU LEU LYS GLU LEU ILE ASP ASN ASN SEQRES 9 B 319 ARG TYR ASP ILE THR ILE TYR LYS LYS GLU PHE THR ILE SEQRES 10 B 319 GLY ALA ALA LYS SER SER LYS TRP ALA LEU LYS ASP VAL SEQRES 11 B 319 VAL LEU ARG SER ALA GLY SER GLY SER ASP SER ILE ALA SEQRES 12 B 319 LYS LEU GLU ASN GLN LEU LYS ARG GLU GLY VAL ASP LYS SEQRES 13 B 319 ILE GLU GLU ASP ALA ALA THR ARG PRO ILE GLU LEU PHE SEQRES 14 B 319 GLY THR ARG ASN PRO LYS THR VAL ASP ILE ILE ASP ILE SEQRES 15 B 319 LYS ASN ASN VAL GLN MET ASP HIS LYS ASP ILE LYS VAL SEQRES 16 B 319 THR ALA LYS ILE LEU SER ILE PHE ASP ASN GLY ASN ASN SEQRES 17 B 319 VAL THR ILE TYR LEU THR ARG SER GLY MET VAL GLY THR SEQRES 18 B 319 GLN CYS THR ILE GLU ASN PRO PHE GLU GLU LEU LEU LYS SEQRES 19 B 319 VAL GLN ILE TRP GLY ARG GLN ASN LEU THR LEU PHE PHE SEQRES 20 B 319 GLY ASN PRO ASN TYR SER TYR LYS ARG GLU GLU LEU THR SEQRES 21 B 319 ALA CYS ILE GLY SER ILE VAL ASP PHE THR LEU ILE PRO SEQRES 22 B 319 ARG VAL LEU ARG VAL ASN GLU TYR LEU TYR ILE LYS ILE SEQRES 23 B 319 TRP CYS PRO ILE TYR ALA THR LEU GLU SER LEU LEU ILE SEQRES 24 B 319 HIS SER ARG LEU GLU TYR ASP ASN ASP THR LEU LYS TYR SEQRES 25 B 319 GLU ASN LEU SER ASP ILE ASP SEQRES 1 D 166 ARG SER SER LYS LEU SER PRO LYS GLN MET LYS ARG GLU SEQRES 2 D 166 ILE LEU GLY VAL LEU ILE GLU LYS SER MET GLU SER LYS SEQRES 3 D 166 VAL CYS LYS ILE TYR GLU PRO LEU LEU SER ILE ASN LEU SEQRES 4 D 166 GLY PRO GLY GLY GLU ALA THR ASP LEU LYS THR GLU PRO SEQRES 5 D 166 VAL LEU HIS LEU LYS PHE TYR GLU THR PHE LEU ALA GLN SEQRES 6 D 166 LEU ALA GLU MET ALA ILE ILE THR LEU ASP SER PHE THR SEQRES 7 D 166 ILE ASN MET THR ASN LEU HIS ASN CYS TYR ARG TYR ILE SEQRES 8 D 166 ILE THR ARG PHE GLN SER LEU ILE ASN VAL GLN ILE PRO SEQRES 9 D 166 GLN ILE THR ILE LYS TYR SER GLU ILE ARG ASN PHE CYS SEQRES 10 D 166 LYS LEU PRO LEU LEU SER LYS LYS LEU ILE LEU GLN MET SEQRES 11 D 166 CYS LYS HIS PHE LEU ASN THR THR HIS ILE GLY ASN LEU SEQRES 12 D 166 ILE ASP TRP TRP VAL ASP PRO THR SER GLU GLU ARG TYR SEQRES 13 D 166 LYS VAL PHE PHE THR TYR SER LYS SER LYS HET GOL A1001 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 GOL C3 H8 O3 FORMUL 6 HOH *15(H2 O) HELIX 1 AA1 SER A 379 ALA A 383 5 5 HELIX 2 AA2 ASN A 446 GLY A 455 1 10 HELIX 3 AA3 SER A 462 ASN A 477 1 16 HELIX 4 AA4 ASP A 728 GLU A 740 1 13 HELIX 5 AA5 VAL A 742 GLU A 747 1 6 HELIX 6 AA6 ASP A 766 ASN A 772 1 7 HELIX 7 AA7 ASN A 815 GLU A 819 1 5 HELIX 8 AA8 GLY A 827 GLY A 836 1 10 HELIX 9 AA9 LYS A 843 CYS A 850 1 8 HELIX 10 AB1 THR A 881 ARG A 890 1 10 HELIX 11 AB2 SER C 275 SER C 294 1 20 HELIX 12 AB3 TYR C 300 LEU C 308 1 9 HELIX 13 AB4 HIS C 324 MET C 338 1 15 HELIX 14 AB5 MET C 350 VAL C 370 1 21 HELIX 15 AB6 TYR C 379 LYS C 387 1 9 HELIX 16 AB7 SER C 392 THR C 407 1 16 HELIX 17 AB8 SER B 379 ALA B 383 5 5 HELIX 18 AB9 ASN B 446 GLY B 455 1 10 HELIX 19 AC1 SER B 462 ASN B 477 1 16 HELIX 20 AC2 ASP B 728 GLY B 741 1 14 HELIX 21 AC3 VAL B 742 GLU B 747 1 6 HELIX 22 AC4 ASP B 766 ASN B 773 1 8 HELIX 23 AC5 ASN B 815 GLU B 819 1 5 HELIX 24 AC6 GLY B 827 GLY B 836 1 10 HELIX 25 AC7 LYS B 843 THR B 848 1 6 HELIX 26 AC8 THR B 881 GLU B 892 1 12 HELIX 27 AC9 SER D 275 SER D 294 1 20 HELIX 28 AD1 TYR D 300 LEU D 308 1 9 HELIX 29 AD2 PRO D 321 MET D 338 1 18 HELIX 30 AD3 MET D 350 GLN D 371 1 22 HELIX 31 AD4 TYR D 379 LYS D 387 1 9 HELIX 32 AD5 SER D 392 THR D 407 1 16 SHEET 1 AA1 6 TYR A 389 ILE A 400 0 SHEET 2 AA1 6 LEU A 417 TYR A 422 -1 O TYR A 422 N LYS A 395 SHEET 3 AA1 6 TYR A 440 ILE A 444 -1 O ILE A 442 N ILE A 419 SHEET 4 AA1 6 ALA A 493 LEU A 505 1 O TRP A 498 N ALA A 443 SHEET 5 AA1 6 TYR A 479 ILE A 490 -1 N PHE A 488 O SER A 495 SHEET 6 AA1 6 TYR A 389 ILE A 400 -1 N GLY A 394 O TYR A 479 SHEET 1 AA2 6 VAL A 432 PHE A 433 0 SHEET 2 AA2 6 TYR A 871 PRO A 877 1 O TYR A 871 N PHE A 433 SHEET 3 AA2 6 ILE A 854 ARG A 865 -1 N ARG A 862 O ILE A 874 SHEET 4 AA2 6 ILE A 781 ASP A 792 -1 N ILE A 781 O LEU A 859 SHEET 5 AA2 6 ASN A 796 THR A 802 -1 O TYR A 800 N LEU A 788 SHEET 6 AA2 6 LEU A 820 TRP A 826 -1 O VAL A 823 N ILE A 799 SHEET 1 AA3 3 VAL C 296 LYS C 298 0 SHEET 2 AA3 3 THR C 347 ASN C 349 -1 O ILE C 348 N CYS C 297 SHEET 3 AA3 3 THR C 342 LEU C 343 -1 N THR C 342 O ASN C 349 SHEET 1 AA4 3 GLN C 374 LYS C 378 0 SHEET 2 AA4 3 ARG C 424 TYR C 431 -1 O TYR C 425 N ILE C 377 SHEET 3 AA4 3 LEU C 412 ASP C 418 -1 N ASP C 418 O LYS C 426 SHEET 1 AA5 6 LEU B 388 ILE B 400 0 SHEET 2 AA5 6 LEU B 418 TYR B 422 -1 O TYR B 422 N LYS B 395 SHEET 3 AA5 6 TYR B 440 ALA B 443 -1 O TYR B 440 N VAL B 421 SHEET 4 AA5 6 ALA B 493 ARG B 506 1 O LEU B 500 N ALA B 443 SHEET 5 AA5 6 ARG B 478 ILE B 490 -1 N THR B 482 O LYS B 501 SHEET 6 AA5 6 LEU B 388 ILE B 400 -1 N TYR B 389 O ILE B 483 SHEET 1 AA6 7 VAL B 432 PHE B 433 0 SHEET 2 AA6 7 TYR B 871 PRO B 877 1 O TYR B 871 N PHE B 433 SHEET 3 AA6 7 ILE B 854 ARG B 865 -1 N LEU B 864 O ILE B 872 SHEET 4 AA6 7 ILE B 781 ASP B 792 -1 N ILE B 781 O LEU B 859 SHEET 5 AA6 7 ASN B 796 THR B 802 -1 O TYR B 800 N LEU B 788 SHEET 6 AA6 7 LEU B 820 TRP B 826 -1 O VAL B 823 N ILE B 799 SHEET 7 AA6 7 TYR B 871 PRO B 877 1 O TRP B 875 N GLN B 824 SHEET 1 AA7 3 VAL D 296 LYS D 298 0 SHEET 2 AA7 3 THR D 347 ASN D 349 -1 O ILE D 348 N CYS D 297 SHEET 3 AA7 3 THR D 342 LEU D 343 -1 N THR D 342 O ASN D 349 SHEET 1 AA8 3 GLN D 374 LYS D 378 0 SHEET 2 AA8 3 ARG D 424 TYR D 431 -1 O TYR D 425 N ILE D 377 SHEET 3 AA8 3 LEU D 412 ASP D 418 -1 N TRP D 416 O PHE D 428 CISPEP 1 ILE A 400 PRO A 401 0 3.12 CISPEP 2 TYR A 459 PRO A 460 0 -0.36 CISPEP 3 ILE B 400 PRO B 401 0 0.45 CISPEP 4 TYR B 459 PRO B 460 0 1.57 SITE 1 AC1 2 ARG A 828 GLN A 829 CRYST1 74.971 84.577 165.393 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013338 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011824 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006046 0.00000