HEADER STRUCTURAL PROTEIN 19-NOV-19 6LCI TITLE SOLUTION STRUCTURE OF MDAA-1 DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MDAA-1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUCOR CIRCINELLOIDES; SOURCE 3 ORGANISM_TAXID: 36080; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CYTOPLASMIC PHASE TRANSITION, WOUND HEALING, FLOW-INDUCED KEYWDS 2 AGGREGATION, STRUCTURAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.A.NGUYEN,S.LE,M.LEE,J.S.FAN,D.YANG,J.YAN,G.JEDD REVDAT 5 15-MAY-24 6LCI 1 REMARK REVDAT 4 14-JUN-23 6LCI 1 REMARK REVDAT 3 10-FEB-21 6LCI 1 JRNL REVDAT 2 02-DEC-20 6LCI 1 JRNL REVDAT 1 25-NOV-20 6LCI 0 JRNL AUTH T.A.NGUYEN,S.LE,M.LEE,J.S.FAN,D.YANG,J.YAN,G.JEDD JRNL TITL FUNGAL WOUND HEALING THROUGH INSTANTANEOUS PROTOPLASMIC JRNL TITL 2 GELATION. JRNL REF CURR.BIOL. V. 31 271 2021 JRNL REFN ISSN 0960-9822 JRNL PMID 33186551 JRNL DOI 10.1016/J.CUB.2020.10.016 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: EEFX FORCE-FIELD REMARK 4 REMARK 4 6LCI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1300014556. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 10 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-99% 13C; U-99% 15N] MDAA REMARK 210 -1, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 3D HNCA; 3D HN(CO)CA; REMARK 210 3D HCCH-TOCSY; 4D NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, NMRPIPE, SPARKY, X-PLOR REMARK 210 NIH REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 LYS A 163 REMARK 465 GLU A 164 REMARK 465 ALA A 165 REMARK 465 SER A 166 REMARK 465 ALA A 167 REMARK 465 GLU A 168 REMARK 465 PRO A 169 REMARK 465 LEU A 170 REMARK 465 LYS A 171 REMARK 465 ARG A 172 REMARK 465 SER A 173 REMARK 465 ALA A 174 REMARK 465 SER A 175 REMARK 465 SER A 176 REMARK 465 SER A 177 REMARK 465 THR A 178 REMARK 465 VAL A 179 REMARK 465 LYS A 180 REMARK 465 SER A 181 REMARK 465 THR A 182 REMARK 465 THR A 183 REMARK 465 ALA A 184 REMARK 465 SER A 185 REMARK 465 ILE A 186 REMARK 465 LYS A 187 REMARK 465 VAL A 188 REMARK 465 PRO A 189 REMARK 465 ALA A 190 REMARK 465 VAL A 191 REMARK 465 ALA A 192 REMARK 465 GLN A 193 REMARK 465 ILE A 194 REMARK 465 LYS A 195 REMARK 465 GLU A 196 REMARK 465 ASP A 197 REMARK 465 ASP A 198 REMARK 465 LEU A 199 REMARK 465 GLU A 200 REMARK 465 HIS A 201 REMARK 465 HIS A 202 REMARK 465 HIS A 203 REMARK 465 HIS A 204 REMARK 465 HIS A 205 REMARK 465 HIS A 206 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PHE A 6 69.02 -102.79 REMARK 500 1 ASN A 32 74.77 -173.85 REMARK 500 1 ASP A 144 78.35 -115.29 REMARK 500 1 VAL A 161 73.25 63.25 REMARK 500 2 ASN A 32 57.04 -164.51 REMARK 500 2 ALA A 92 -143.15 64.81 REMARK 500 2 ASN A 95 69.75 -155.38 REMARK 500 3 PHE A 6 76.87 -117.25 REMARK 500 3 ASN A 32 27.06 -156.26 REMARK 500 3 SER A 37 -176.05 70.90 REMARK 500 3 ALA A 92 -154.90 -131.86 REMARK 500 3 ARG A 132 129.89 70.85 REMARK 500 4 ASN A 32 45.36 -161.92 REMARK 500 4 SER A 37 -169.38 70.10 REMARK 500 4 ALA A 92 -158.57 -101.75 REMARK 500 4 ASN A 95 28.54 -144.99 REMARK 500 4 VAL A 161 63.75 61.00 REMARK 500 5 ASN A 32 50.26 -160.94 REMARK 500 5 SER A 37 -172.29 69.56 REMARK 500 5 ALA A 92 -159.92 -137.69 REMARK 500 6 ALA A 4 58.49 -94.43 REMARK 500 6 ASN A 32 48.57 -161.26 REMARK 500 7 ASN A 32 58.67 -166.59 REMARK 500 7 ALA A 92 -155.07 -127.47 REMARK 500 7 ASN A 95 31.32 -143.63 REMARK 500 8 PHE A 6 60.71 65.20 REMARK 500 8 ASN A 32 65.94 -170.24 REMARK 500 9 ASN A 32 75.21 -172.55 REMARK 500 10 PHE A 6 55.84 75.74 REMARK 500 10 ASN A 32 74.10 -171.85 REMARK 500 11 ASN A 32 36.13 -150.94 REMARK 500 11 ALA A 92 -159.41 72.98 REMARK 500 11 ASN A 95 71.12 -160.12 REMARK 500 12 ASN A 32 48.32 -160.20 REMARK 500 12 ALA A 92 -158.74 -115.63 REMARK 500 12 ASP A 149 31.79 -97.35 REMARK 500 13 ASN A 32 50.93 -161.62 REMARK 500 14 ASN A 32 53.73 -158.49 REMARK 500 14 ALA A 92 -154.30 -114.09 REMARK 500 15 ALA A 3 -169.04 71.15 REMARK 500 15 PHE A 6 77.15 -107.86 REMARK 500 15 ASN A 32 50.64 -163.27 REMARK 500 15 SER A 37 -172.65 69.07 REMARK 500 16 ASN A 32 51.53 -162.21 REMARK 500 16 ALA A 92 -148.08 -102.38 REMARK 500 16 ASN A 95 31.02 -155.31 REMARK 500 17 PHE A 6 74.73 -112.34 REMARK 500 17 ASN A 32 55.07 -164.78 REMARK 500 18 PHE A 6 70.89 -105.01 REMARK 500 18 ASN A 32 57.03 -165.43 REMARK 500 REMARK 500 THIS ENTRY HAS 55 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36300 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF MDAA-1 DOMAIN DBREF 6LCI A 1 206 PDB 6LCI 6LCI 1 206 SEQRES 1 A 206 MET ALA ALA ALA MET PHE GLU LYS SER GLU LYS PHE PRO SEQRES 2 A 206 GLU GLY TRP PHE PHE ILE LYS ASN ASN SER ASN GLY TYR SEQRES 3 A 206 VAL LEU MET VAL ASP ASN GLU SER GLN GLU SER GLY SER SEQRES 4 A 206 PRO ILE VAL LEU ALA THR LEU ARG THR LYS ASP TYR ALA SEQRES 5 A 206 SER GLN LEU TRP ARG HIS ASP PRO SER GLY TYR LEU VAL SEQRES 6 A 206 ASN LYS LYS SER GLY GLN VAL MET ASP ILE ALA LYS GLY SEQRES 7 A 206 THR PRO LYS ALA GLY VAL ASP ILE VAL GLN GLN THR GLN SEQRES 8 A 206 ALA GLY SER ASN VAL LYS ASP ASP LEU ASN PHE GLN LYS SEQRES 9 A 206 PHE GLY LEU SER PRO TYR GLY HIS ILE TYR LEU ALA ASN SEQRES 10 A 206 LYS PRO SER LEU ILE LEU GLY ILE LYS GLU SER PHE PHE SEQRES 11 A 206 ALA ARG ARG GLU GLY LEU HIS VAL HIS LEU GLN LEU VAL SEQRES 12 A 206 ASP LYS ARG HIS LEU ASP ARG LYS GLU GLN ARG TRP ASP SEQRES 13 A 206 PHE VAL LEU PRO VAL VAL LYS GLU ALA SER ALA GLU PRO SEQRES 14 A 206 LEU LYS ARG SER ALA SER SER SER THR VAL LYS SER THR SEQRES 15 A 206 THR ALA SER ILE LYS VAL PRO ALA VAL ALA GLN ILE LYS SEQRES 16 A 206 GLU ASP ASP LEU GLU HIS HIS HIS HIS HIS HIS HELIX 1 AA1 TYR A 51 GLN A 54 5 4 HELIX 2 AA2 ASP A 144 LEU A 148 5 5 HELIX 3 AA3 ARG A 150 GLN A 153 5 4 SHEET 1 AA1 4 ILE A 41 ALA A 44 0 SHEET 2 AA1 4 TYR A 26 VAL A 30 -1 N MET A 29 O VAL A 42 SHEET 3 AA1 4 PHE A 18 ASN A 21 -1 N ASN A 21 O TYR A 26 SHEET 4 AA1 4 TRP A 155 VAL A 158 -1 O ASP A 156 N LYS A 20 SHEET 1 AA2 2 TRP A 56 HIS A 58 0 SHEET 2 AA2 2 LEU A 64 ASN A 66 -1 O VAL A 65 N ARG A 57 SHEET 1 AA3 2 VAL A 72 ILE A 75 0 SHEET 2 AA3 2 ILE A 86 GLN A 89 -1 O GLN A 89 N VAL A 72 SHEET 1 AA4 2 PHE A 105 LEU A 107 0 SHEET 2 AA4 2 ILE A 113 LEU A 115 -1 O TYR A 114 N GLY A 106 SHEET 1 AA5 2 LEU A 121 ILE A 125 0 SHEET 2 AA5 2 VAL A 138 LEU A 142 -1 O GLN A 141 N ILE A 122 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1