data_6LDM # _entry.id 6LDM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6LDM pdb_00006ldm 10.2210/pdb6ldm/pdb WWPDB D_1300014598 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6LDM _pdbx_database_status.recvd_initial_deposition_date 2019-11-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Traczyk, A.' 1 0000-0002-4018-8568 'Gill, D.J.' 2 0000-0003-1439-5755 'Chong, W.L.' 3 0000-0002-4343-818X 'Rhodes, D.' 4 0000-0002-2363-2591 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 48 _citation.language ? _citation.page_first 4562 _citation.page_last 4571 _citation.title 'Structural basis of G-quadruplex DNA recognition by the yeast telomeric protein Rap1.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkaa171 _citation.pdbx_database_id_PubMed 32187364 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Traczyk, A.' 1 ? primary 'Liew, C.W.' 2 ? primary 'Gill, D.J.' 3 ? primary 'Rhodes, D.' 4 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 97.720 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6LDM _cell.details ? _cell.formula_units_Z ? _cell.length_a 84.680 _cell.length_a_esd ? _cell.length_b 70.200 _cell.length_b_esd ? _cell.length_c 64.850 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LDM _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA-binding protein RAP1' 33648.562 1 ? ? ? ? 2 polymer syn 'G-guadruplex DNA' 6034.862 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 non-polymer syn 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 122.143 1 ? ? ? ? 5 non-polymer syn 'SODIUM ION' 22.990 11 ? ? ? ? 6 non-polymer syn 'POTASSIUM ION' 39.098 5 ? ? ? ? 7 water nat water 18.015 43 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Repressor/activator site-binding protein,SBF-E,TUF' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;HHHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTGSENLYFQGGALPSHNKASFTDEEDEFILDVVRKNPTRRTTHT LYDEISHYVPNHTGNSIRHRFRVYLSKRLEYVYEVDKFGKLVRDDDGNLIKTKVLPPSIKRKFSADEDYTLAIAVKKQFY RDLFQIDPDTGRSLITDEDTPTAIARRNMTMDPNHVPGSEPNFAAYRTQSRRGPIAREFFKHFAEEHAAHTENAWRDRFR KFLLAYGIDDYISYYEAEKAQNRPEPMKNLTNRPKRPGVPTPGNYNSAAKR ; ;HHHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTGSENLYFQGGALPSHNKASFTDEEDEFILDVVRKNPTRRTTHT LYDEISHYVPNHTGNSIRHRFRVYLSKRLEYVYEVDKFGKLVRDDDGNLIKTKVLPPSIKRKFSADEDYTLAIAVKKQFY RDLFQIDPDTGRSLITDEDTPTAIARRNMTMDPNHVPGSEPNFAAYRTQSRRGPIAREFFKHFAEEHAAHTENAWRDRFR KFLLAYGIDDYISYYEAEKAQNRPEPMKNLTNRPKRPGVPTPGNYNSAAKR ; A ? 2 polydeoxyribonucleotide no no '(DT)(DT)(DG)(DG)(DG)(DT)(DG)(DG)(DG)(DT)(DG)(DG)(DG)(DT)(DG)(DG)(DG)(DT)(DT)' TTGGGTGGGTGGGTGGGTT B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 SER n 1 8 SER n 1 9 GLY n 1 10 LEU n 1 11 VAL n 1 12 PRO n 1 13 ARG n 1 14 GLY n 1 15 SER n 1 16 GLY n 1 17 MET n 1 18 LYS n 1 19 GLU n 1 20 THR n 1 21 ALA n 1 22 ALA n 1 23 ALA n 1 24 LYS n 1 25 PHE n 1 26 GLU n 1 27 ARG n 1 28 GLN n 1 29 HIS n 1 30 MET n 1 31 ASP n 1 32 SER n 1 33 PRO n 1 34 ASP n 1 35 LEU n 1 36 GLY n 1 37 THR n 1 38 GLY n 1 39 SER n 1 40 GLU n 1 41 ASN n 1 42 LEU n 1 43 TYR n 1 44 PHE n 1 45 GLN n 1 46 GLY n 1 47 GLY n 1 48 ALA n 1 49 LEU n 1 50 PRO n 1 51 SER n 1 52 HIS n 1 53 ASN n 1 54 LYS n 1 55 ALA n 1 56 SER n 1 57 PHE n 1 58 THR n 1 59 ASP n 1 60 GLU n 1 61 GLU n 1 62 ASP n 1 63 GLU n 1 64 PHE n 1 65 ILE n 1 66 LEU n 1 67 ASP n 1 68 VAL n 1 69 VAL n 1 70 ARG n 1 71 LYS n 1 72 ASN n 1 73 PRO n 1 74 THR n 1 75 ARG n 1 76 ARG n 1 77 THR n 1 78 THR n 1 79 HIS n 1 80 THR n 1 81 LEU n 1 82 TYR n 1 83 ASP n 1 84 GLU n 1 85 ILE n 1 86 SER n 1 87 HIS n 1 88 TYR n 1 89 VAL n 1 90 PRO n 1 91 ASN n 1 92 HIS n 1 93 THR n 1 94 GLY n 1 95 ASN n 1 96 SER n 1 97 ILE n 1 98 ARG n 1 99 HIS n 1 100 ARG n 1 101 PHE n 1 102 ARG n 1 103 VAL n 1 104 TYR n 1 105 LEU n 1 106 SER n 1 107 LYS n 1 108 ARG n 1 109 LEU n 1 110 GLU n 1 111 TYR n 1 112 VAL n 1 113 TYR n 1 114 GLU n 1 115 VAL n 1 116 ASP n 1 117 LYS n 1 118 PHE n 1 119 GLY n 1 120 LYS n 1 121 LEU n 1 122 VAL n 1 123 ARG n 1 124 ASP n 1 125 ASP n 1 126 ASP n 1 127 GLY n 1 128 ASN n 1 129 LEU n 1 130 ILE n 1 131 LYS n 1 132 THR n 1 133 LYS n 1 134 VAL n 1 135 LEU n 1 136 PRO n 1 137 PRO n 1 138 SER n 1 139 ILE n 1 140 LYS n 1 141 ARG n 1 142 LYS n 1 143 PHE n 1 144 SER n 1 145 ALA n 1 146 ASP n 1 147 GLU n 1 148 ASP n 1 149 TYR n 1 150 THR n 1 151 LEU n 1 152 ALA n 1 153 ILE n 1 154 ALA n 1 155 VAL n 1 156 LYS n 1 157 LYS n 1 158 GLN n 1 159 PHE n 1 160 TYR n 1 161 ARG n 1 162 ASP n 1 163 LEU n 1 164 PHE n 1 165 GLN n 1 166 ILE n 1 167 ASP n 1 168 PRO n 1 169 ASP n 1 170 THR n 1 171 GLY n 1 172 ARG n 1 173 SER n 1 174 LEU n 1 175 ILE n 1 176 THR n 1 177 ASP n 1 178 GLU n 1 179 ASP n 1 180 THR n 1 181 PRO n 1 182 THR n 1 183 ALA n 1 184 ILE n 1 185 ALA n 1 186 ARG n 1 187 ARG n 1 188 ASN n 1 189 MET n 1 190 THR n 1 191 MET n 1 192 ASP n 1 193 PRO n 1 194 ASN n 1 195 HIS n 1 196 VAL n 1 197 PRO n 1 198 GLY n 1 199 SER n 1 200 GLU n 1 201 PRO n 1 202 ASN n 1 203 PHE n 1 204 ALA n 1 205 ALA n 1 206 TYR n 1 207 ARG n 1 208 THR n 1 209 GLN n 1 210 SER n 1 211 ARG n 1 212 ARG n 1 213 GLY n 1 214 PRO n 1 215 ILE n 1 216 ALA n 1 217 ARG n 1 218 GLU n 1 219 PHE n 1 220 PHE n 1 221 LYS n 1 222 HIS n 1 223 PHE n 1 224 ALA n 1 225 GLU n 1 226 GLU n 1 227 HIS n 1 228 ALA n 1 229 ALA n 1 230 HIS n 1 231 THR n 1 232 GLU n 1 233 ASN n 1 234 ALA n 1 235 TRP n 1 236 ARG n 1 237 ASP n 1 238 ARG n 1 239 PHE n 1 240 ARG n 1 241 LYS n 1 242 PHE n 1 243 LEU n 1 244 LEU n 1 245 ALA n 1 246 TYR n 1 247 GLY n 1 248 ILE n 1 249 ASP n 1 250 ASP n 1 251 TYR n 1 252 ILE n 1 253 SER n 1 254 TYR n 1 255 TYR n 1 256 GLU n 1 257 ALA n 1 258 GLU n 1 259 LYS n 1 260 ALA n 1 261 GLN n 1 262 ASN n 1 263 ARG n 1 264 PRO n 1 265 GLU n 1 266 PRO n 1 267 MET n 1 268 LYS n 1 269 ASN n 1 270 LEU n 1 271 THR n 1 272 ASN n 1 273 ARG n 1 274 PRO n 1 275 LYS n 1 276 ARG n 1 277 PRO n 1 278 GLY n 1 279 VAL n 1 280 PRO n 1 281 THR n 1 282 PRO n 1 283 GLY n 1 284 ASN n 1 285 TYR n 1 286 ASN n 1 287 SER n 1 288 ALA n 1 289 ALA n 1 290 LYS n 1 291 ARG n 2 1 DT n 2 2 DT n 2 3 DG n 2 4 DG n 2 5 DG n 2 6 DT n 2 7 DG n 2 8 DG n 2 9 DG n 2 10 DT n 2 11 DG n 2 12 DG n 2 13 DG n 2 14 DT n 2 15 DG n 2 16 DG n 2 17 DG n 2 18 DT n 2 19 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 291 _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'RAP1, GRF1, TUF1, YNL216W, N1310' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 204508 / S288c' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae (strain ATCC 204508 / S288c)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 559292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21-(DE3)-RIPL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET30a-TEV _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 19 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP RAP1_YEAST P11938 ? 1 ;GALPSHNKASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRVYLSKRLEYVYEVDKFGKLVRDDD GNLIKTKVLPPSIKRKFSADEDYTLAIAVKKQFYRDLFQIDPDTGRSLITDEDTPTAIARRNMTMDPNHVPGSEPNFAAY RTQSRRGPIAREFFKHFAEEHAAHTENAWRDRFRKFLLAYGIDDYISYYEAEKAQNREPEPMKNLTNRPKRPGVPTPGNY NSAAKR ; 353 2 PDB 6LDM 6LDM ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6LDM A 47 ? 291 ? P11938 353 ? 598 ? 353 597 2 2 6LDM B 1 ? 19 ? 6LDM 1 ? 19 ? 1 19 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6LDM HIS A 1 ? UNP P11938 ? ? 'expression tag' 307 1 1 6LDM HIS A 2 ? UNP P11938 ? ? 'expression tag' 308 2 1 6LDM HIS A 3 ? UNP P11938 ? ? 'expression tag' 309 3 1 6LDM HIS A 4 ? UNP P11938 ? ? 'expression tag' 310 4 1 6LDM HIS A 5 ? UNP P11938 ? ? 'expression tag' 311 5 1 6LDM HIS A 6 ? UNP P11938 ? ? 'expression tag' 312 6 1 6LDM SER A 7 ? UNP P11938 ? ? 'expression tag' 313 7 1 6LDM SER A 8 ? UNP P11938 ? ? 'expression tag' 314 8 1 6LDM GLY A 9 ? UNP P11938 ? ? 'expression tag' 315 9 1 6LDM LEU A 10 ? UNP P11938 ? ? 'expression tag' 316 10 1 6LDM VAL A 11 ? UNP P11938 ? ? 'expression tag' 317 11 1 6LDM PRO A 12 ? UNP P11938 ? ? 'expression tag' 318 12 1 6LDM ARG A 13 ? UNP P11938 ? ? 'expression tag' 319 13 1 6LDM GLY A 14 ? UNP P11938 ? ? 'expression tag' 320 14 1 6LDM SER A 15 ? UNP P11938 ? ? 'expression tag' 321 15 1 6LDM GLY A 16 ? UNP P11938 ? ? 'expression tag' 322 16 1 6LDM MET A 17 ? UNP P11938 ? ? 'expression tag' 323 17 1 6LDM LYS A 18 ? UNP P11938 ? ? 'expression tag' 324 18 1 6LDM GLU A 19 ? UNP P11938 ? ? 'expression tag' 325 19 1 6LDM THR A 20 ? UNP P11938 ? ? 'expression tag' 326 20 1 6LDM ALA A 21 ? UNP P11938 ? ? 'expression tag' 327 21 1 6LDM ALA A 22 ? UNP P11938 ? ? 'expression tag' 328 22 1 6LDM ALA A 23 ? UNP P11938 ? ? 'expression tag' 329 23 1 6LDM LYS A 24 ? UNP P11938 ? ? 'expression tag' 330 24 1 6LDM PHE A 25 ? UNP P11938 ? ? 'expression tag' 331 25 1 6LDM GLU A 26 ? UNP P11938 ? ? 'expression tag' 332 26 1 6LDM ARG A 27 ? UNP P11938 ? ? 'expression tag' 333 27 1 6LDM GLN A 28 ? UNP P11938 ? ? 'expression tag' 334 28 1 6LDM HIS A 29 ? UNP P11938 ? ? 'expression tag' 335 29 1 6LDM MET A 30 ? UNP P11938 ? ? 'expression tag' 336 30 1 6LDM ASP A 31 ? UNP P11938 ? ? 'expression tag' 337 31 1 6LDM SER A 32 ? UNP P11938 ? ? 'expression tag' 338 32 1 6LDM PRO A 33 ? UNP P11938 ? ? 'expression tag' 339 33 1 6LDM ASP A 34 ? UNP P11938 ? ? 'expression tag' 340 34 1 6LDM LEU A 35 ? UNP P11938 ? ? 'expression tag' 341 35 1 6LDM GLY A 36 ? UNP P11938 ? ? 'expression tag' 342 36 1 6LDM THR A 37 ? UNP P11938 ? ? 'expression tag' 343 37 1 6LDM GLY A 38 ? UNP P11938 ? ? 'expression tag' 344 38 1 6LDM SER A 39 ? UNP P11938 ? ? 'expression tag' 345 39 1 6LDM GLU A 40 ? UNP P11938 ? ? 'expression tag' 346 40 1 6LDM ASN A 41 ? UNP P11938 ? ? 'expression tag' 347 41 1 6LDM LEU A 42 ? UNP P11938 ? ? 'expression tag' 348 42 1 6LDM TYR A 43 ? UNP P11938 ? ? 'expression tag' 349 43 1 6LDM PHE A 44 ? UNP P11938 ? ? 'expression tag' 350 44 1 6LDM GLN A 45 ? UNP P11938 ? ? 'expression tag' 351 45 1 6LDM GLY A 46 ? UNP P11938 ? ? 'expression tag' 352 46 1 6LDM ? A ? ? UNP P11938 GLU 570 deletion ? 47 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TRS non-polymer . 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 'TRIS BUFFER' 'C4 H12 N O3 1' 122.143 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6LDM _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.41 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M Sodium citrate tribasic dihydrate pH 5.6, 10% isopropanol, 14% PEG 4000, 10% of glycerol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 80 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 2M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-09-12 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X06DA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X06DA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate 71.790 _reflns.entry_id 6LDM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.40 _reflns.d_resolution_low 64.262 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 14665 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.700 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.055 _reflns.pdbx_netI_over_av_sigmaI 6.700 _reflns.pdbx_netI_over_sigmaI 8.700 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.068 _reflns.pdbx_Rpim_I_all 0.040 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 2.400 2.530 ? 1.800 5258 ? ? ? 2134 99.500 ? ? ? ? 0.406 ? ? ? ? ? ? ? ? 2.500 0.406 ? ? 2.000 0.515 0.312 ? 1 1 ? ? ? 2.530 2.680 ? 3.100 5616 ? ? ? 2015 99.600 ? ? ? ? 0.216 ? ? ? ? ? ? ? ? 2.800 0.216 ? ? 3.600 0.266 0.154 ? 2 1 ? ? ? 2.680 2.870 ? 3.600 5329 ? ? ? 1908 99.500 ? ? ? ? 0.184 ? ? ? ? ? ? ? ? 2.800 0.184 ? ? 4.400 0.226 0.129 ? 3 1 ? ? ? 2.870 3.100 ? 6.900 4940 ? ? ? 1790 99.400 ? ? ? ? 0.095 ? ? ? ? ? ? ? ? 2.800 0.095 ? ? 6.800 0.118 0.068 ? 4 1 ? ? ? 3.100 3.390 ? 6.500 4074 ? ? ? 1622 99.000 ? ? ? ? 0.061 ? ? ? ? ? ? ? ? 2.500 0.061 ? ? 9.600 0.077 0.047 ? 5 1 ? ? ? 3.390 3.790 ? 4.100 3534 ? ? ? 1474 99.300 ? ? ? ? 0.061 ? ? ? ? ? ? ? ? 2.400 0.061 ? ? 12.100 0.077 0.048 ? 6 1 ? ? ? 3.790 4.380 ? 11.100 3715 ? ? ? 1302 98.800 ? ? ? ? 0.048 ? ? ? ? ? ? ? ? 2.900 0.048 ? ? 16.000 0.059 0.033 ? 7 1 ? ? ? 4.380 5.370 ? 12.600 3065 ? ? ? 1098 97.700 ? ? ? ? 0.044 ? ? ? ? ? ? ? ? 2.800 0.044 ? ? 16.900 0.054 0.030 ? 8 1 ? ? ? 5.370 7.590 ? 12.600 2082 ? ? ? 844 97.300 ? ? ? ? 0.044 ? ? ? ? ? ? ? ? 2.500 0.044 ? ? 16.200 0.055 0.032 ? 9 1 ? ? ? 7.590 32.131 ? 18.900 1439 ? ? ? 480 97.500 ? ? ? ? 0.030 ? ? ? ? ? ? ? ? 3.000 0.030 ? ? 19.400 0.037 0.021 ? 10 1 ? ? ? # _refine.aniso_B[1][1] -3.9976 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 1.0962 _refine.aniso_B[2][2] 5.2599 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -1.2623 _refine.B_iso_max 136.070 _refine.B_iso_mean 74.7600 _refine.B_iso_min 44.080 _refine.correlation_coeff_Fo_to_Fc 0.9490 _refine.correlation_coeff_Fo_to_Fc_free 0.9380 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6LDM _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.4 _refine.ls_d_res_low 35.09 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 14665 _refine.ls_number_reflns_R_free 737 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.1 _refine.ls_percent_reflns_R_free 5.0300 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2043 _refine.ls_R_factor_R_free 0.233 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.203 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1IGN _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.2080 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.2040 _refine.pdbx_overall_SU_R_Blow_DPI 0.2660 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.2740 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 6LDM _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.340 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.4 _refine_hist.d_res_low 35.09 _refine_hist.number_atoms_solvent 43 _refine_hist.number_atoms_total 2055 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 209 _refine_hist.pdbx_B_iso_mean_ligand 81.15 _refine_hist.pdbx_B_iso_mean_solvent 64.17 _refine_hist.pdbx_number_atoms_protein 1598 _refine_hist.pdbx_number_atoms_nucleic_acid 384 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? ? ? 667 ? t_dihedral_angle_d 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? ? ? t_trig_c_planes ? ? 'X-RAY DIFFRACTION' ? ? ? 302 ? t_gen_planes 5.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 2082 ? t_it 10.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_nbd ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_improper_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_pseud_angle ? ? 'X-RAY DIFFRACTION' ? ? ? 262 ? t_chiral_improper_torsion 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_sum_occupancies ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_distance ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_angle ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 1339 ? t_ideal_dist_contact 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? 0.009 ? 2082 ? t_bond_d 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 0.890 ? 2898 ? t_angle_deg 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 2.950 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 19.550 ? ? ? t_other_torsion ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.4 _refine_ls_shell.d_res_low 2.53 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 26 _refine_ls_shell.number_reflns_R_work 382 _refine_ls_shell.percent_reflns_obs 98.3500 _refine_ls_shell.percent_reflns_R_free 6.3700 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2512 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2356 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6LDM _struct.title 'Structural basis of G-quadruplex DNA recognition by the yeast telomeric protein Rap1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6LDM _struct_keywords.text 'complex, G-quadruplex, DNA, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 6 ? J N N 6 ? K N N 6 ? L N N 6 ? M N N 5 ? N N N 5 ? O N N 5 ? P N N 5 ? Q N N 5 ? R N N 5 ? S N N 5 ? T N N 5 ? U N N 7 ? V N N 7 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 58 ? LYS A 71 ? THR A 364 LYS A 377 1 ? 14 HELX_P HELX_P2 AA2 ASN A 72 ? ARG A 76 ? ASN A 378 ARG A 382 5 ? 5 HELX_P HELX_P3 AA3 HIS A 79 ? HIS A 87 ? HIS A 385 HIS A 393 1 ? 9 HELX_P HELX_P4 AA4 THR A 93 ? TYR A 104 ? THR A 399 TYR A 410 1 ? 12 HELX_P HELX_P5 AA5 LEU A 105 ? LEU A 109 ? LEU A 411 LEU A 415 5 ? 5 HELX_P HELX_P6 AA6 SER A 144 ? GLN A 165 ? SER A 450 GLN A 471 1 ? 22 HELX_P HELX_P7 AA7 ALA A 216 ? HIS A 227 ? ALA A 522 HIS A 533 1 ? 12 HELX_P HELX_P8 AA8 THR A 231 ? PHE A 242 ? THR A 537 PHE A 548 1 ? 12 HELX_P HELX_P9 AA9 PHE A 242 ? GLY A 247 ? PHE A 548 GLY A 553 1 ? 6 HELX_P HELX_P10 AB1 GLY A 247 ? ALA A 260 ? GLY A 553 ALA A 566 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ALA 55 O ? ? ? 1_555 G NA . NA ? ? A ALA 361 A NA 605 1_555 ? ? ? ? ? ? ? 3.017 ? ? metalc2 metalc ? ? A ASN 95 OD1 ? ? ? 1_555 F NA . NA ? ? A ASN 401 A NA 604 1_555 ? ? ? ? ? ? ? 2.493 ? ? metalc3 metalc ? ? G NA . NA ? ? ? 1_555 V HOH . O ? ? A NA 605 B HOH 213 1_555 ? ? ? ? ? ? ? 2.633 ? ? metalc4 metalc ? ? U HOH . O ? ? ? 1_555 T NA . NA ? ? A HOH 706 B NA 113 1_555 ? ? ? ? ? ? ? 2.918 ? ? metalc5 metalc ? ? B DG 3 O6 ? ? ? 1_555 I K . K ? ? B DG 3 B K 102 1_555 ? ? ? ? ? ? ? 2.779 ? ? metalc6 metalc ? ? B DG 3 O6 ? ? ? 1_555 J K . K ? ? B DG 3 B K 103 1_555 ? ? ? ? ? ? ? 2.563 ? ? metalc7 metalc ? ? B DG 3 O6 ? ? ? 1_555 J K . K ? ? B DG 3 B K 103 2_555 ? ? ? ? ? ? ? 2.563 ? ? metalc8 metalc ? ? B DG 3 OP2 ? ? ? 1_555 K K . K ? ? B DG 3 B K 104 1_555 ? ? ? ? ? ? ? 2.149 ? ? metalc9 metalc ? ? B DG 3 "O5'" ? ? ? 1_555 K K . K ? ? B DG 3 B K 104 1_555 ? ? ? ? ? ? ? 2.658 ? ? metalc10 metalc ? ? B DG 4 O6 ? ? ? 1_555 H K . K ? ? B DG 4 B K 101 1_555 ? ? ? ? ? ? ? 2.944 ? ? metalc11 metalc ? ? B DG 4 O6 ? ? ? 1_555 I K . K ? ? B DG 4 B K 102 1_555 ? ? ? ? ? ? ? 2.708 ? ? metalc12 metalc ? ? B DG 5 O6 ? ? ? 1_555 H K . K ? ? B DG 5 B K 101 1_555 ? ? ? ? ? ? ? 2.678 ? ? metalc13 metalc ? ? B DG 5 "O4'" ? ? ? 1_555 O NA . NA ? ? B DG 5 B NA 108 1_555 ? ? ? ? ? ? ? 2.727 ? ? metalc14 metalc ? ? B DG 7 O6 ? ? ? 1_555 I K . K ? ? B DG 7 B K 102 1_555 ? ? ? ? ? ? ? 2.823 ? ? metalc15 metalc ? ? B DG 7 O6 ? ? ? 1_555 J K . K ? ? B DG 7 B K 103 1_555 ? ? ? ? ? ? ? 2.758 ? ? metalc16 metalc ? ? B DG 7 O6 ? ? ? 1_555 J K . K ? ? B DG 7 B K 103 2_555 ? ? ? ? ? ? ? 2.758 ? ? metalc17 metalc ? ? B DG 7 OP1 ? ? ? 1_555 O NA . NA ? ? B DG 7 B NA 108 1_555 ? ? ? ? ? ? ? 2.668 ? ? metalc18 metalc ? ? B DG 8 O6 ? ? ? 1_555 H K . K ? ? B DG 8 B K 101 1_555 ? ? ? ? ? ? ? 2.852 ? ? metalc19 metalc ? ? B DG 8 O6 ? ? ? 1_555 I K . K ? ? B DG 8 B K 102 1_555 ? ? ? ? ? ? ? 2.696 ? ? metalc20 metalc ? ? B DG 8 OP2 ? ? ? 1_555 Q NA . NA ? ? B DG 8 B NA 110 1_555 ? ? ? ? ? ? ? 2.231 ? ? metalc21 metalc ? ? B DG 9 O6 ? ? ? 1_555 H K . K ? ? B DG 9 B K 101 1_555 ? ? ? ? ? ? ? 2.648 ? ? metalc22 metalc ? ? B DG 11 O6 ? ? ? 1_555 I K . K ? ? B DG 11 B K 102 1_555 ? ? ? ? ? ? ? 2.988 ? ? metalc23 metalc ? ? B DG 11 O6 ? ? ? 1_555 J K . K ? ? B DG 11 B K 103 1_555 ? ? ? ? ? ? ? 2.956 ? ? metalc24 metalc ? ? B DG 11 O6 ? ? ? 1_555 J K . K ? ? B DG 11 B K 103 2_555 ? ? ? ? ? ? ? 2.956 ? ? metalc25 metalc ? ? B DG 11 OP1 ? ? ? 1_555 R NA . NA ? ? B DG 11 B NA 111 1_555 ? ? ? ? ? ? ? 2.673 ? ? metalc26 metalc ? ? B DG 12 O6 ? ? ? 1_555 H K . K ? ? B DG 12 B K 101 1_555 ? ? ? ? ? ? ? 2.765 ? ? metalc27 metalc ? ? B DG 12 O6 ? ? ? 1_555 I K . K ? ? B DG 12 B K 102 1_555 ? ? ? ? ? ? ? 2.775 ? ? metalc28 metalc ? ? B DG 13 O6 ? ? ? 1_555 H K . K ? ? B DG 13 B K 101 1_555 ? ? ? ? ? ? ? 2.793 ? ? metalc29 metalc ? ? B DG 15 O6 ? ? ? 1_555 I K . K ? ? B DG 15 B K 102 1_555 ? ? ? ? ? ? ? 2.824 ? ? metalc30 metalc ? ? B DG 15 O6 ? ? ? 1_555 J K . K ? ? B DG 15 B K 103 1_555 ? ? ? ? ? ? ? 2.834 ? ? metalc31 metalc ? ? B DG 15 O6 ? ? ? 1_555 J K . K ? ? B DG 15 B K 103 2_555 ? ? ? ? ? ? ? 2.834 ? ? metalc32 metalc ? ? B DG 16 O6 ? ? ? 1_555 H K . K ? ? B DG 16 B K 101 1_555 ? ? ? ? ? ? ? 2.959 ? ? metalc33 metalc ? ? B DG 16 O6 ? ? ? 1_555 I K . K ? ? B DG 16 B K 102 1_555 ? ? ? ? ? ? ? 2.856 ? ? metalc34 metalc ? ? B DG 17 O6 ? ? ? 1_555 H K . K ? ? B DG 17 B K 101 1_555 ? ? ? ? ? ? ? 2.651 ? ? metalc35 metalc ? ? B DG 17 O6 ? ? ? 1_555 P NA . NA ? ? B DG 17 B NA 109 1_555 ? ? ? ? ? ? ? 3.011 ? ? metalc36 metalc ? ? B DT 18 "O3'" ? ? ? 1_555 L K . K ? ? B DT 18 B K 105 1_555 ? ? ? ? ? ? ? 2.117 ? ? metalc37 metalc ? ? M NA . NA ? ? ? 1_555 V HOH . O ? ? B NA 106 B HOH 201 1_555 ? ? ? ? ? ? ? 2.385 ? ? metalc38 metalc ? ? N NA . NA ? ? ? 1_555 V HOH . O ? ? B NA 107 B HOH 202 1_555 ? ? ? ? ? ? ? 2.693 ? ? metalc39 metalc ? ? N NA . NA ? ? ? 1_555 V HOH . O ? ? B NA 107 B HOH 207 1_555 ? ? ? ? ? ? ? 2.409 ? ? metalc40 metalc ? ? P NA . NA ? ? ? 1_555 V HOH . O ? ? B NA 109 B HOH 209 1_555 ? ? ? ? ? ? ? 3.146 ? ? metalc41 metalc ? ? R NA . NA ? ? ? 1_555 V HOH . O ? ? B NA 111 B HOH 210 1_555 ? ? ? ? ? ? ? 3.129 ? ? metalc42 metalc ? ? T NA . NA ? ? ? 1_555 V HOH . O ? ? B NA 113 B HOH 208 1_555 ? ? ? ? ? ? ? 3.032 ? ? hydrog1 hydrog ? ? B DG 3 N1 ? ? ? 1_555 B DG 7 O6 ? ? B DG 3 B DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? B DG 3 N2 ? ? ? 1_555 B DG 7 N7 ? ? B DG 3 B DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? B DG 3 N7 ? ? ? 1_555 B DG 15 N2 ? ? B DG 3 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? B DG 3 O6 ? ? ? 1_555 B DG 15 N1 ? ? B DG 3 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? B DG 4 N1 ? ? ? 1_555 B DG 8 O6 ? ? B DG 4 B DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? B DG 4 N2 ? ? ? 1_555 B DG 8 N7 ? ? B DG 4 B DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? B DG 4 N7 ? ? ? 1_555 B DG 16 N2 ? ? B DG 4 B DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? B DG 4 O6 ? ? ? 1_555 B DG 16 N1 ? ? B DG 4 B DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? B DG 5 N1 ? ? ? 1_555 B DG 9 O6 ? ? B DG 5 B DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? B DG 5 N2 ? ? ? 1_555 B DG 9 N7 ? ? B DG 5 B DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? B DG 5 N7 ? ? ? 1_555 B DG 17 N2 ? ? B DG 5 B DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? B DG 5 O6 ? ? ? 1_555 B DG 17 N1 ? ? B DG 5 B DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? B DG 7 N1 ? ? ? 1_555 B DG 11 O6 ? ? B DG 7 B DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? B DG 7 N2 ? ? ? 1_555 B DG 11 N7 ? ? B DG 7 B DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? B DG 8 N1 ? ? ? 1_555 B DG 12 O6 ? ? B DG 8 B DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? B DG 8 N2 ? ? ? 1_555 B DG 12 N7 ? ? B DG 8 B DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? B DG 9 N1 ? ? ? 1_555 B DG 13 O6 ? ? B DG 9 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? B DG 9 N2 ? ? ? 1_555 B DG 13 N7 ? ? B DG 9 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? B DG 11 N1 ? ? ? 1_555 B DG 15 O6 ? ? B DG 11 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? B DG 11 N2 ? ? ? 1_555 B DG 15 N7 ? ? B DG 11 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? B DG 12 N1 ? ? ? 1_555 B DG 16 O6 ? ? B DG 12 B DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? B DG 12 N2 ? ? ? 1_555 B DG 16 N7 ? ? B DG 12 B DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? B DG 13 N1 ? ? ? 1_555 B DG 17 O6 ? ? B DG 13 B DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? B DG 13 N2 ? ? ? 1_555 B DG 17 N7 ? ? B DG 13 B DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 112 ? TYR A 113 ? VAL A 418 TYR A 419 AA1 2 LYS A 131 ? THR A 132 ? LYS A 437 THR A 438 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id VAL _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 112 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 418 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id THR _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 132 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id THR _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 438 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 601 ? 2 'binding site for residue GOL A 601' AC2 Software A TRS 602 ? 6 'binding site for residue TRS A 602' AC3 Software A NA 603 ? 6 'binding site for residue NA A 603' AC4 Software A NA 604 ? 3 'binding site for residue NA A 604' AC5 Software A NA 605 ? 5 'binding site for residue NA A 605' AC6 Software B K 101 ? 9 'binding site for residue K B 101' AC7 Software B K 102 ? 11 'binding site for residue K B 102' AC8 Software B K 103 ? 10 'binding site for residue K B 103' AC9 Software B K 104 ? 2 'binding site for residue K B 104' AD1 Software B K 105 ? 1 'binding site for residue K B 105' AD2 Software B NA 106 ? 5 'binding site for residue NA B 106' AD3 Software B NA 107 ? 3 'binding site for residue NA B 107' AD4 Software B NA 108 ? 4 'binding site for residue NA B 108' AD5 Software B NA 109 ? 6 'binding site for residue NA B 109' AD6 Software B NA 110 ? 3 'binding site for residue NA B 110' AD7 Software B NA 111 ? 3 'binding site for residue NA B 111' AD8 Software B NA 112 ? 3 'binding site for residue NA B 112' AD9 Software B NA 113 ? 3 'binding site for residue NA B 113' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 PHE A 242 ? PHE A 548 . ? 1_555 ? 2 AC1 2 MET A 267 ? MET A 573 . ? 1_555 ? 3 AC2 6 THR A 78 ? THR A 384 . ? 1_555 ? 4 AC2 6 HIS A 79 ? HIS A 385 . ? 1_555 ? 5 AC2 6 THR A 80 ? THR A 386 . ? 1_555 ? 6 AC2 6 ARG A 141 ? ARG A 447 . ? 1_555 ? 7 AC2 6 THR A 231 ? THR A 537 . ? 1_555 ? 8 AC2 6 ALA A 234 ? ALA A 540 . ? 1_555 ? 9 AC3 6 HIS A 99 ? HIS A 405 . ? 1_555 ? 10 AC3 6 ARG A 102 ? ARG A 408 . ? 1_555 ? 11 AC3 6 VAL A 103 ? VAL A 409 . ? 1_555 ? 12 AC3 6 DG B 13 ? DG B 13 . ? 1_555 ? 13 AC3 6 DT B 18 ? DT B 18 . ? 1_555 ? 14 AC3 6 NA P . ? NA B 109 . ? 1_555 ? 15 AC4 3 ASN A 95 ? ASN A 401 . ? 1_555 ? 16 AC4 3 ARG A 98 ? ARG A 404 . ? 1_555 ? 17 AC4 3 HIS A 99 ? HIS A 405 . ? 1_555 ? 18 AC5 5 ALA A 55 ? ALA A 361 . ? 1_555 ? 19 AC5 5 PHE A 57 ? PHE A 363 . ? 1_555 ? 20 AC5 5 DG B 12 ? DG B 12 . ? 1_555 ? 21 AC5 5 DG B 13 ? DG B 13 . ? 1_555 ? 22 AC5 5 HOH V . ? HOH B 213 . ? 1_555 ? 23 AC6 9 DG B 4 ? DG B 4 . ? 1_555 ? 24 AC6 9 DG B 5 ? DG B 5 . ? 1_555 ? 25 AC6 9 DG B 8 ? DG B 8 . ? 1_555 ? 26 AC6 9 DG B 9 ? DG B 9 . ? 1_555 ? 27 AC6 9 DG B 12 ? DG B 12 . ? 1_555 ? 28 AC6 9 DG B 13 ? DG B 13 . ? 1_555 ? 29 AC6 9 DG B 16 ? DG B 16 . ? 1_555 ? 30 AC6 9 DG B 17 ? DG B 17 . ? 1_555 ? 31 AC6 9 K I . ? K B 102 . ? 1_555 ? 32 AC7 11 DG B 3 ? DG B 3 . ? 1_555 ? 33 AC7 11 DG B 4 ? DG B 4 . ? 1_555 ? 34 AC7 11 DG B 7 ? DG B 7 . ? 1_555 ? 35 AC7 11 DG B 8 ? DG B 8 . ? 1_555 ? 36 AC7 11 DG B 11 ? DG B 11 . ? 1_555 ? 37 AC7 11 DG B 12 ? DG B 12 . ? 1_555 ? 38 AC7 11 DG B 15 ? DG B 15 . ? 1_555 ? 39 AC7 11 DG B 16 ? DG B 16 . ? 1_555 ? 40 AC7 11 K H . ? K B 101 . ? 1_555 ? 41 AC7 11 K J . ? K B 103 . ? 2_555 ? 42 AC7 11 K J . ? K B 103 . ? 1_555 ? 43 AC8 10 DG B 3 ? DG B 3 . ? 1_555 ? 44 AC8 10 DG B 3 ? DG B 3 . ? 2_555 ? 45 AC8 10 DG B 7 ? DG B 7 . ? 1_555 ? 46 AC8 10 DG B 7 ? DG B 7 . ? 2_555 ? 47 AC8 10 DG B 11 ? DG B 11 . ? 2_555 ? 48 AC8 10 DG B 11 ? DG B 11 . ? 1_555 ? 49 AC8 10 DG B 15 ? DG B 15 . ? 1_555 ? 50 AC8 10 DG B 15 ? DG B 15 . ? 2_555 ? 51 AC8 10 K I . ? K B 102 . ? 2_555 ? 52 AC8 10 K I . ? K B 102 . ? 1_555 ? 53 AC9 2 DT B 2 ? DT B 2 . ? 2_555 ? 54 AC9 2 DG B 3 ? DG B 3 . ? 1_555 ? 55 AD1 1 DT B 18 ? DT B 18 . ? 1_555 ? 56 AD2 5 DG B 8 ? DG B 8 . ? 1_555 ? 57 AD2 5 DG B 9 ? DG B 9 . ? 1_555 ? 58 AD2 5 DG B 11 ? DG B 11 . ? 1_555 ? 59 AD2 5 DG B 12 ? DG B 12 . ? 1_555 ? 60 AD2 5 HOH V . ? HOH B 201 . ? 1_555 ? 61 AD3 3 DG B 3 ? DG B 3 . ? 1_555 ? 62 AD3 3 HOH V . ? HOH B 202 . ? 1_555 ? 63 AD3 3 HOH V . ? HOH B 207 . ? 1_555 ? 64 AD4 4 DG B 4 ? DG B 4 . ? 1_555 ? 65 AD4 4 DG B 5 ? DG B 5 . ? 1_555 ? 66 AD4 4 DT B 6 ? DT B 6 . ? 1_555 ? 67 AD4 4 DG B 7 ? DG B 7 . ? 1_555 ? 68 AD5 6 VAL A 103 ? VAL A 409 . ? 1_555 ? 69 AD5 6 NA E . ? NA A 603 . ? 1_555 ? 70 AD5 6 DG B 5 ? DG B 5 . ? 1_555 ? 71 AD5 6 DG B 13 ? DG B 13 . ? 1_555 ? 72 AD5 6 DG B 17 ? DG B 17 . ? 1_555 ? 73 AD5 6 DT B 18 ? DT B 18 . ? 1_555 ? 74 AD6 3 DT B 6 ? DT B 6 . ? 1_555 ? 75 AD6 3 DG B 7 ? DG B 7 . ? 1_555 ? 76 AD6 3 DG B 8 ? DG B 8 . ? 1_555 ? 77 AD7 3 DG B 7 ? DG B 7 . ? 1_555 ? 78 AD7 3 DG B 8 ? DG B 8 . ? 1_555 ? 79 AD7 3 DG B 11 ? DG B 11 . ? 1_555 ? 80 AD8 3 DT B 2 ? DT B 2 . ? 2_555 ? 81 AD8 3 DG B 15 ? DG B 15 . ? 1_555 ? 82 AD8 3 DG B 16 ? DG B 16 . ? 1_555 ? 83 AD9 3 HOH U . ? HOH A 706 . ? 1_555 ? 84 AD9 3 DG B 13 ? DG B 13 . ? 1_555 ? 85 AD9 3 HOH V . ? HOH B 208 . ? 1_555 ? # _atom_sites.entry_id 6LDM _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.011809 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001601 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014245 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015561 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C K N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 307 ? ? ? A . n A 1 2 HIS 2 308 ? ? ? A . n A 1 3 HIS 3 309 ? ? ? A . n A 1 4 HIS 4 310 ? ? ? A . n A 1 5 HIS 5 311 ? ? ? A . n A 1 6 HIS 6 312 ? ? ? A . n A 1 7 SER 7 313 ? ? ? A . n A 1 8 SER 8 314 ? ? ? A . n A 1 9 GLY 9 315 ? ? ? A . n A 1 10 LEU 10 316 ? ? ? A . n A 1 11 VAL 11 317 ? ? ? A . n A 1 12 PRO 12 318 ? ? ? A . n A 1 13 ARG 13 319 ? ? ? A . n A 1 14 GLY 14 320 ? ? ? A . n A 1 15 SER 15 321 ? ? ? A . n A 1 16 GLY 16 322 ? ? ? A . n A 1 17 MET 17 323 ? ? ? A . n A 1 18 LYS 18 324 ? ? ? A . n A 1 19 GLU 19 325 ? ? ? A . n A 1 20 THR 20 326 ? ? ? A . n A 1 21 ALA 21 327 ? ? ? A . n A 1 22 ALA 22 328 ? ? ? A . n A 1 23 ALA 23 329 ? ? ? A . n A 1 24 LYS 24 330 ? ? ? A . n A 1 25 PHE 25 331 ? ? ? A . n A 1 26 GLU 26 332 ? ? ? A . n A 1 27 ARG 27 333 ? ? ? A . n A 1 28 GLN 28 334 ? ? ? A . n A 1 29 HIS 29 335 ? ? ? A . n A 1 30 MET 30 336 ? ? ? A . n A 1 31 ASP 31 337 ? ? ? A . n A 1 32 SER 32 338 ? ? ? A . n A 1 33 PRO 33 339 ? ? ? A . n A 1 34 ASP 34 340 ? ? ? A . n A 1 35 LEU 35 341 ? ? ? A . n A 1 36 GLY 36 342 ? ? ? A . n A 1 37 THR 37 343 ? ? ? A . n A 1 38 GLY 38 344 ? ? ? A . n A 1 39 SER 39 345 ? ? ? A . n A 1 40 GLU 40 346 ? ? ? A . n A 1 41 ASN 41 347 ? ? ? A . n A 1 42 LEU 42 348 ? ? ? A . n A 1 43 TYR 43 349 ? ? ? A . n A 1 44 PHE 44 350 ? ? ? A . n A 1 45 GLN 45 351 ? ? ? A . n A 1 46 GLY 46 352 ? ? ? A . n A 1 47 GLY 47 353 ? ? ? A . n A 1 48 ALA 48 354 ? ? ? A . n A 1 49 LEU 49 355 ? ? ? A . n A 1 50 PRO 50 356 ? ? ? A . n A 1 51 SER 51 357 ? ? ? A . n A 1 52 HIS 52 358 ? ? ? A . n A 1 53 ASN 53 359 ? ? ? A . n A 1 54 LYS 54 360 ? ? ? A . n A 1 55 ALA 55 361 361 ALA ALA A . n A 1 56 SER 56 362 362 SER SER A . n A 1 57 PHE 57 363 363 PHE PHE A . n A 1 58 THR 58 364 364 THR THR A . n A 1 59 ASP 59 365 365 ASP ASP A . n A 1 60 GLU 60 366 366 GLU GLU A . n A 1 61 GLU 61 367 367 GLU GLU A . n A 1 62 ASP 62 368 368 ASP ASP A . n A 1 63 GLU 63 369 369 GLU GLU A . n A 1 64 PHE 64 370 370 PHE PHE A . n A 1 65 ILE 65 371 371 ILE ILE A . n A 1 66 LEU 66 372 372 LEU LEU A . n A 1 67 ASP 67 373 373 ASP ASP A . n A 1 68 VAL 68 374 374 VAL VAL A . n A 1 69 VAL 69 375 375 VAL VAL A . n A 1 70 ARG 70 376 376 ARG ARG A . n A 1 71 LYS 71 377 377 LYS LYS A . n A 1 72 ASN 72 378 378 ASN ASN A . n A 1 73 PRO 73 379 379 PRO PRO A . n A 1 74 THR 74 380 380 THR THR A . n A 1 75 ARG 75 381 381 ARG ARG A . n A 1 76 ARG 76 382 382 ARG ARG A . n A 1 77 THR 77 383 383 THR THR A . n A 1 78 THR 78 384 384 THR THR A . n A 1 79 HIS 79 385 385 HIS HIS A . n A 1 80 THR 80 386 386 THR THR A . n A 1 81 LEU 81 387 387 LEU LEU A . n A 1 82 TYR 82 388 388 TYR TYR A . n A 1 83 ASP 83 389 389 ASP ASP A . n A 1 84 GLU 84 390 390 GLU GLU A . n A 1 85 ILE 85 391 391 ILE ILE A . n A 1 86 SER 86 392 392 SER SER A . n A 1 87 HIS 87 393 393 HIS HIS A . n A 1 88 TYR 88 394 394 TYR TYR A . n A 1 89 VAL 89 395 395 VAL VAL A . n A 1 90 PRO 90 396 396 PRO PRO A . n A 1 91 ASN 91 397 397 ASN ASN A . n A 1 92 HIS 92 398 398 HIS HIS A . n A 1 93 THR 93 399 399 THR THR A . n A 1 94 GLY 94 400 400 GLY GLY A . n A 1 95 ASN 95 401 401 ASN ASN A . n A 1 96 SER 96 402 402 SER SER A . n A 1 97 ILE 97 403 403 ILE ILE A . n A 1 98 ARG 98 404 404 ARG ARG A . n A 1 99 HIS 99 405 405 HIS HIS A . n A 1 100 ARG 100 406 406 ARG ARG A . n A 1 101 PHE 101 407 407 PHE PHE A . n A 1 102 ARG 102 408 408 ARG ARG A . n A 1 103 VAL 103 409 409 VAL VAL A . n A 1 104 TYR 104 410 410 TYR TYR A . n A 1 105 LEU 105 411 411 LEU LEU A . n A 1 106 SER 106 412 412 SER SER A . n A 1 107 LYS 107 413 413 LYS ALA A . n A 1 108 ARG 108 414 414 ARG ARG A . n A 1 109 LEU 109 415 415 LEU LEU A . n A 1 110 GLU 110 416 416 GLU GLU A . n A 1 111 TYR 111 417 417 TYR TYR A . n A 1 112 VAL 112 418 418 VAL VAL A . n A 1 113 TYR 113 419 419 TYR TYR A . n A 1 114 GLU 114 420 420 GLU GLU A . n A 1 115 VAL 115 421 421 VAL VAL A . n A 1 116 ASP 116 422 422 ASP ASP A . n A 1 117 LYS 117 423 423 LYS ALA A . n A 1 118 PHE 118 424 424 PHE PHE A . n A 1 119 GLY 119 425 425 GLY GLY A . n A 1 120 LYS 120 426 426 LYS LYS A . n A 1 121 LEU 121 427 427 LEU LEU A . n A 1 122 VAL 122 428 428 VAL VAL A . n A 1 123 ARG 123 429 429 ARG ARG A . n A 1 124 ASP 124 430 430 ASP ASP A . n A 1 125 ASP 125 431 431 ASP ASP A . n A 1 126 ASP 126 432 432 ASP ASP A . n A 1 127 GLY 127 433 433 GLY GLY A . n A 1 128 ASN 128 434 434 ASN ASN A . n A 1 129 LEU 129 435 435 LEU LEU A . n A 1 130 ILE 130 436 436 ILE ILE A . n A 1 131 LYS 131 437 437 LYS LYS A . n A 1 132 THR 132 438 438 THR THR A . n A 1 133 LYS 133 439 439 LYS LYS A . n A 1 134 VAL 134 440 440 VAL VAL A . n A 1 135 LEU 135 441 441 LEU LEU A . n A 1 136 PRO 136 442 442 PRO PRO A . n A 1 137 PRO 137 443 443 PRO PRO A . n A 1 138 SER 138 444 444 SER SER A . n A 1 139 ILE 139 445 445 ILE ILE A . n A 1 140 LYS 140 446 446 LYS LYS A . n A 1 141 ARG 141 447 447 ARG ARG A . n A 1 142 LYS 142 448 448 LYS ALA A . n A 1 143 PHE 143 449 449 PHE PHE A . n A 1 144 SER 144 450 450 SER SER A . n A 1 145 ALA 145 451 451 ALA ALA A . n A 1 146 ASP 146 452 452 ASP ASP A . n A 1 147 GLU 147 453 453 GLU GLU A . n A 1 148 ASP 148 454 454 ASP ASP A . n A 1 149 TYR 149 455 455 TYR TYR A . n A 1 150 THR 150 456 456 THR THR A . n A 1 151 LEU 151 457 457 LEU LEU A . n A 1 152 ALA 152 458 458 ALA ALA A . n A 1 153 ILE 153 459 459 ILE ILE A . n A 1 154 ALA 154 460 460 ALA ALA A . n A 1 155 VAL 155 461 461 VAL VAL A . n A 1 156 LYS 156 462 462 LYS LYS A . n A 1 157 LYS 157 463 463 LYS LYS A . n A 1 158 GLN 158 464 464 GLN GLN A . n A 1 159 PHE 159 465 465 PHE PHE A . n A 1 160 TYR 160 466 466 TYR TYR A . n A 1 161 ARG 161 467 467 ARG ARG A . n A 1 162 ASP 162 468 468 ASP ASP A . n A 1 163 LEU 163 469 469 LEU LEU A . n A 1 164 PHE 164 470 470 PHE PHE A . n A 1 165 GLN 165 471 471 GLN GLN A . n A 1 166 ILE 166 472 472 ILE ILE A . n A 1 167 ASP 167 473 473 ASP ASP A . n A 1 168 PRO 168 474 474 PRO PRO A . n A 1 169 ASP 169 475 475 ASP ASP A . n A 1 170 THR 170 476 476 THR THR A . n A 1 171 GLY 171 477 477 GLY GLY A . n A 1 172 ARG 172 478 478 ARG ARG A . n A 1 173 SER 173 479 479 SER SER A . n A 1 174 LEU 174 480 480 LEU LEU A . n A 1 175 ILE 175 481 481 ILE ILE A . n A 1 176 THR 176 482 482 THR THR A . n A 1 177 ASP 177 483 483 ASP ASP A . n A 1 178 GLU 178 484 ? ? ? A . n A 1 179 ASP 179 485 ? ? ? A . n A 1 180 THR 180 486 ? ? ? A . n A 1 181 PRO 181 487 ? ? ? A . n A 1 182 THR 182 488 ? ? ? A . n A 1 183 ALA 183 489 ? ? ? A . n A 1 184 ILE 184 490 ? ? ? A . n A 1 185 ALA 185 491 ? ? ? A . n A 1 186 ARG 186 492 ? ? ? A . n A 1 187 ARG 187 493 ? ? ? A . n A 1 188 ASN 188 494 ? ? ? A . n A 1 189 MET 189 495 ? ? ? A . n A 1 190 THR 190 496 ? ? ? A . n A 1 191 MET 191 497 ? ? ? A . n A 1 192 ASP 192 498 ? ? ? A . n A 1 193 PRO 193 499 ? ? ? A . n A 1 194 ASN 194 500 ? ? ? A . n A 1 195 HIS 195 501 ? ? ? A . n A 1 196 VAL 196 502 ? ? ? A . n A 1 197 PRO 197 503 ? ? ? A . n A 1 198 GLY 198 504 ? ? ? A . n A 1 199 SER 199 505 ? ? ? A . n A 1 200 GLU 200 506 506 GLU GLU A . n A 1 201 PRO 201 507 507 PRO PRO A . n A 1 202 ASN 202 508 508 ASN ASN A . n A 1 203 PHE 203 509 509 PHE PHE A . n A 1 204 ALA 204 510 510 ALA ALA A . n A 1 205 ALA 205 511 511 ALA ALA A . n A 1 206 TYR 206 512 512 TYR TYR A . n A 1 207 ARG 207 513 513 ARG ARG A . n A 1 208 THR 208 514 514 THR THR A . n A 1 209 GLN 209 515 515 GLN GLN A . n A 1 210 SER 210 516 516 SER SER A . n A 1 211 ARG 211 517 517 ARG ARG A . n A 1 212 ARG 212 518 518 ARG ARG A . n A 1 213 GLY 213 519 519 GLY GLY A . n A 1 214 PRO 214 520 520 PRO PRO A . n A 1 215 ILE 215 521 521 ILE ILE A . n A 1 216 ALA 216 522 522 ALA ALA A . n A 1 217 ARG 217 523 523 ARG ARG A . n A 1 218 GLU 218 524 524 GLU GLU A . n A 1 219 PHE 219 525 525 PHE PHE A . n A 1 220 PHE 220 526 526 PHE PHE A . n A 1 221 LYS 221 527 527 LYS LYS A . n A 1 222 HIS 222 528 528 HIS HIS A . n A 1 223 PHE 223 529 529 PHE PHE A . n A 1 224 ALA 224 530 530 ALA ALA A . n A 1 225 GLU 225 531 531 GLU GLU A . n A 1 226 GLU 226 532 532 GLU GLU A . n A 1 227 HIS 227 533 533 HIS HIS A . n A 1 228 ALA 228 534 534 ALA ALA A . n A 1 229 ALA 229 535 535 ALA ALA A . n A 1 230 HIS 230 536 536 HIS HIS A . n A 1 231 THR 231 537 537 THR THR A . n A 1 232 GLU 232 538 538 GLU GLU A . n A 1 233 ASN 233 539 539 ASN ASN A . n A 1 234 ALA 234 540 540 ALA ALA A . n A 1 235 TRP 235 541 541 TRP TRP A . n A 1 236 ARG 236 542 542 ARG ARG A . n A 1 237 ASP 237 543 543 ASP ASP A . n A 1 238 ARG 238 544 544 ARG ARG A . n A 1 239 PHE 239 545 545 PHE PHE A . n A 1 240 ARG 240 546 546 ARG ARG A . n A 1 241 LYS 241 547 547 LYS LYS A . n A 1 242 PHE 242 548 548 PHE PHE A . n A 1 243 LEU 243 549 549 LEU LEU A . n A 1 244 LEU 244 550 550 LEU LEU A . n A 1 245 ALA 245 551 551 ALA ALA A . n A 1 246 TYR 246 552 552 TYR TYR A . n A 1 247 GLY 247 553 553 GLY GLY A . n A 1 248 ILE 248 554 554 ILE ILE A . n A 1 249 ASP 249 555 555 ASP ASP A . n A 1 250 ASP 250 556 556 ASP ASP A . n A 1 251 TYR 251 557 557 TYR TYR A . n A 1 252 ILE 252 558 558 ILE ILE A . n A 1 253 SER 253 559 559 SER SER A . n A 1 254 TYR 254 560 560 TYR TYR A . n A 1 255 TYR 255 561 561 TYR TYR A . n A 1 256 GLU 256 562 562 GLU GLU A . n A 1 257 ALA 257 563 563 ALA ALA A . n A 1 258 GLU 258 564 564 GLU GLU A . n A 1 259 LYS 259 565 565 LYS LYS A . n A 1 260 ALA 260 566 566 ALA ALA A . n A 1 261 GLN 261 567 567 GLN GLN A . n A 1 262 ASN 262 568 568 ASN ASN A . n A 1 263 ARG 263 569 569 ARG ARG A . n A 1 264 PRO 264 570 570 PRO PRO A . n A 1 265 GLU 265 571 571 GLU GLU A . n A 1 266 PRO 266 572 572 PRO PRO A . n A 1 267 MET 267 573 573 MET MET A . n A 1 268 LYS 268 574 ? ? ? A . n A 1 269 ASN 269 575 ? ? ? A . n A 1 270 LEU 270 576 ? ? ? A . n A 1 271 THR 271 577 ? ? ? A . n A 1 272 ASN 272 578 ? ? ? A . n A 1 273 ARG 273 579 ? ? ? A . n A 1 274 PRO 274 580 ? ? ? A . n A 1 275 LYS 275 581 ? ? ? A . n A 1 276 ARG 276 582 ? ? ? A . n A 1 277 PRO 277 583 ? ? ? A . n A 1 278 GLY 278 584 ? ? ? A . n A 1 279 VAL 279 585 ? ? ? A . n A 1 280 PRO 280 586 ? ? ? A . n A 1 281 THR 281 587 ? ? ? A . n A 1 282 PRO 282 588 ? ? ? A . n A 1 283 GLY 283 589 ? ? ? A . n A 1 284 ASN 284 590 ? ? ? A . n A 1 285 TYR 285 591 ? ? ? A . n A 1 286 ASN 286 592 ? ? ? A . n A 1 287 SER 287 593 ? ? ? A . n A 1 288 ALA 288 594 ? ? ? A . n A 1 289 ALA 289 595 ? ? ? A . n A 1 290 LYS 290 596 ? ? ? A . n A 1 291 ARG 291 597 ? ? ? A . n B 2 1 DT 1 1 1 DT DT B . n B 2 2 DT 2 2 2 DT DT B . n B 2 3 DG 3 3 3 DG DG B . n B 2 4 DG 4 4 4 DG DG B . n B 2 5 DG 5 5 5 DG DG B . n B 2 6 DT 6 6 6 DT DT B . n B 2 7 DG 7 7 7 DG DG B . n B 2 8 DG 8 8 8 DG DG B . n B 2 9 DG 9 9 9 DG DG B . n B 2 10 DT 10 10 10 DT DT B . n B 2 11 DG 11 11 11 DG DG B . n B 2 12 DG 12 12 12 DG DG B . n B 2 13 DG 13 13 13 DG DG B . n B 2 14 DT 14 14 14 DT DT B . n B 2 15 DG 15 15 15 DG DG B . n B 2 16 DG 16 16 16 DG DG B . n B 2 17 DG 17 17 17 DG DG B . n B 2 18 DT 18 18 18 DT DT B . n B 2 19 DT 19 19 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL 1 601 601 GOL GOL A . D 4 TRS 1 602 701 TRS TRS A . E 5 NA 1 603 9 NA NA A . F 5 NA 1 604 16 NA NA A . G 5 NA 1 605 22 NA NA A . H 6 K 1 101 1 K K B . I 6 K 1 102 2 K K B . J 6 K 1 103 3 K K B . K 6 K 1 104 4 K K B . L 6 K 1 105 5 K K B . M 5 NA 1 106 3 NA NA B . N 5 NA 1 107 4 NA NA B . O 5 NA 1 108 7 NA NA B . P 5 NA 1 109 8 NA NA B . Q 5 NA 1 110 12 NA NA B . R 5 NA 1 111 14 NA NA B . S 5 NA 1 112 15 NA NA B . T 5 NA 1 113 23 NA NA B . U 7 HOH 1 701 58 HOH HOH A . U 7 HOH 2 702 28 HOH HOH A . U 7 HOH 3 703 2 HOH HOH A . U 7 HOH 4 704 45 HOH HOH A . U 7 HOH 5 705 41 HOH HOH A . U 7 HOH 6 706 60 HOH HOH A . U 7 HOH 7 707 10 HOH HOH A . U 7 HOH 8 708 37 HOH HOH A . U 7 HOH 9 709 15 HOH HOH A . U 7 HOH 10 710 11 HOH HOH A . U 7 HOH 11 711 30 HOH HOH A . U 7 HOH 12 712 1 HOH HOH A . U 7 HOH 13 713 44 HOH HOH A . U 7 HOH 14 714 47 HOH HOH A . U 7 HOH 15 715 40 HOH HOH A . U 7 HOH 16 716 20 HOH HOH A . U 7 HOH 17 717 21 HOH HOH A . U 7 HOH 18 718 42 HOH HOH A . U 7 HOH 19 719 65 HOH HOH A . U 7 HOH 20 720 31 HOH HOH A . U 7 HOH 21 721 18 HOH HOH A . U 7 HOH 22 722 29 HOH HOH A . U 7 HOH 23 723 49 HOH HOH A . U 7 HOH 24 724 63 HOH HOH A . U 7 HOH 25 725 25 HOH HOH A . U 7 HOH 26 726 16 HOH HOH A . U 7 HOH 27 727 26 HOH HOH A . U 7 HOH 28 728 19 HOH HOH A . V 7 HOH 1 201 5 HOH HOH B . V 7 HOH 2 202 12 HOH HOH B . V 7 HOH 3 203 8 HOH HOH B . V 7 HOH 4 204 4 HOH HOH B . V 7 HOH 5 205 6 HOH HOH B . V 7 HOH 6 206 54 HOH HOH B . V 7 HOH 7 207 23 HOH HOH B . V 7 HOH 8 208 61 HOH HOH B . V 7 HOH 9 209 62 HOH HOH B . V 7 HOH 10 210 59 HOH HOH B . V 7 HOH 11 211 53 HOH HOH B . V 7 HOH 12 212 64 HOH HOH B . V 7 HOH 13 213 52 HOH HOH B . V 7 HOH 14 214 50 HOH HOH B . V 7 HOH 15 215 56 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4200 ? 1 MORE -124 ? 1 'SSA (A^2)' 14600 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id K _pdbx_struct_special_symmetry.auth_seq_id 103 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id J _pdbx_struct_special_symmetry.label_comp_id K _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ALA 55 ? A ALA 361 ? 1_555 NA ? G NA . ? A NA 605 ? 1_555 O ? V HOH . ? B HOH 213 ? 1_555 153.6 ? 2 O ? U HOH . ? A HOH 706 ? 1_555 NA ? T NA . ? B NA 113 ? 1_555 O ? V HOH . ? B HOH 208 ? 1_555 104.4 ? 3 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 4 ? B DG 4 ? 1_555 77.2 ? 4 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 65.1 ? 5 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 96.2 ? 6 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 8 ? B DG 8 ? 1_555 127.1 ? 7 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 8 ? B DG 8 ? 1_555 72.6 ? 8 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 8 ? B DG 8 ? 1_555 76.1 ? 9 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 103.4 ? 10 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 160.3 ? 11 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 67.1 ? 12 O6 ? B DG 8 ? B DG 8 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 92.4 ? 13 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 158.9 ? 14 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 112.3 ? 15 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 129.3 ? 16 O6 ? B DG 8 ? B DG 8 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 74.0 ? 17 O6 ? B DG 11 ? B DG 11 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 74.2 ? 18 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 72.4 ? 19 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 129.7 ? 20 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 105.7 ? 21 O6 ? B DG 8 ? B DG 8 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 156.1 ? 22 O6 ? B DG 11 ? B DG 11 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 67.5 ? 23 O6 ? B DG 12 ? B DG 12 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 87.7 ? 24 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 16 ? B DG 16 ? 1_555 97.4 ? 25 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 16 ? B DG 16 ? 1_555 73.7 ? 26 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 16 ? B DG 16 ? 1_555 161.7 ? 27 O6 ? B DG 8 ? B DG 8 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 16 ? B DG 16 ? 1_555 114.0 ? 28 O6 ? B DG 11 ? B DG 11 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 16 ? B DG 16 ? 1_555 125.2 ? 29 O6 ? B DG 12 ? B DG 12 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 16 ? B DG 16 ? 1_555 69.0 ? 30 O6 ? B DG 15 ? B DG 15 ? 1_555 K ? I K . ? B K 102 ? 1_555 O6 ? B DG 16 ? B DG 16 ? 1_555 71.7 ? 31 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 3 ? B DG 3 ? 1_555 0.0 ? 32 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 68.9 ? 33 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 68.9 ? 34 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 68.9 ? 35 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 68.9 ? 36 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 0.0 ? 37 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 110.1 ? 38 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 110.1 ? 39 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 68.4 ? 40 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 68.4 ? 41 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 110.1 ? 42 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 110.1 ? 43 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 68.4 ? 44 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 68.4 ? 45 O6 ? B DG 11 ? B DG 11 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 0.0 ? 46 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 75.5 ? 47 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 75.5 ? 48 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 107.2 ? 49 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 107.2 ? 50 O6 ? B DG 11 ? B DG 11 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 67.9 ? 51 O6 ? B DG 11 ? B DG 11 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 67.9 ? 52 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 75.5 ? 53 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 75.5 ? 54 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 107.2 ? 55 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 107.2 ? 56 O6 ? B DG 11 ? B DG 11 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 67.9 ? 57 O6 ? B DG 11 ? B DG 11 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 67.9 ? 58 O6 ? B DG 15 ? B DG 15 ? 1_555 K ? J K . ? B K 103 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 0.0 ? 59 OP2 ? B DG 3 ? B DG 3 ? 1_555 K ? K K . ? B K 104 ? 1_555 "O5'" ? B DG 3 ? B DG 3 ? 1_555 62.4 ? 60 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 5 ? B DG 5 ? 1_555 74.5 ? 61 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 8 ? B DG 8 ? 1_555 67.0 ? 62 O6 ? B DG 5 ? B DG 5 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 8 ? B DG 8 ? 1_555 86.7 ? 63 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 132.2 ? 64 O6 ? B DG 5 ? B DG 5 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 74.8 ? 65 O6 ? B DG 8 ? B DG 8 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 75.6 ? 66 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 105.7 ? 67 O6 ? B DG 5 ? B DG 5 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 155.7 ? 68 O6 ? B DG 8 ? B DG 8 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 71.7 ? 69 O6 ? B DG 9 ? B DG 9 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 88.9 ? 70 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 152.0 ? 71 O6 ? B DG 5 ? B DG 5 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 116.3 ? 72 O6 ? B DG 8 ? B DG 8 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 135.9 ? 73 O6 ? B DG 9 ? B DG 9 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 75.3 ? 74 O6 ? B DG 12 ? B DG 12 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 75.2 ? 75 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 16 ? B DG 16 ? 1_555 68.9 ? 76 O6 ? B DG 5 ? B DG 5 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 16 ? B DG 16 ? 1_555 131.3 ? 77 O6 ? B DG 8 ? B DG 8 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 16 ? B DG 16 ? 1_555 106.5 ? 78 O6 ? B DG 9 ? B DG 9 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 16 ? B DG 16 ? 1_555 153.5 ? 79 O6 ? B DG 12 ? B DG 12 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 16 ? B DG 16 ? 1_555 67.7 ? 80 O6 ? B DG 13 ? B DG 13 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 16 ? B DG 16 ? 1_555 86.5 ? 81 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 17 ? B DG 17 ? 1_555 85.5 ? 82 O6 ? B DG 5 ? B DG 5 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 17 ? B DG 17 ? 1_555 73.8 ? 83 O6 ? B DG 8 ? B DG 8 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 17 ? B DG 17 ? 1_555 149.9 ? 84 O6 ? B DG 9 ? B DG 9 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 17 ? B DG 17 ? 1_555 119.2 ? 85 O6 ? B DG 12 ? B DG 12 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 17 ? B DG 17 ? 1_555 130.4 ? 86 O6 ? B DG 13 ? B DG 13 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 17 ? B DG 17 ? 1_555 74.1 ? 87 O6 ? B DG 16 ? B DG 16 ? 1_555 K ? H K . ? B K 101 ? 1_555 O6 ? B DG 17 ? B DG 17 ? 1_555 72.4 ? 88 "O4'" ? B DG 5 ? B DG 5 ? 1_555 NA ? O NA . ? B NA 108 ? 1_555 OP1 ? B DG 7 ? B DG 7 ? 1_555 113.2 ? 89 OP1 ? B DG 11 ? B DG 11 ? 1_555 NA ? R NA . ? B NA 111 ? 1_555 O ? V HOH . ? B HOH 210 ? 1_555 132.0 ? 90 O6 ? B DG 17 ? B DG 17 ? 1_555 NA ? P NA . ? B NA 109 ? 1_555 O ? V HOH . ? B HOH 209 ? 1_555 118.2 ? 91 O ? V HOH . ? B HOH 202 ? 1_555 NA ? N NA . ? B NA 107 ? 1_555 O ? V HOH . ? B HOH 207 ? 1_555 105.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-03-18 2 'Structure model' 1 1 2020-04-01 3 'Structure model' 1 2 2020-05-13 4 'Structure model' 1 3 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 7 4 'Structure model' pdbx_initial_refinement_model 8 4 'Structure model' pdbx_struct_conn_angle 9 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_DOI' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 2 'Structure model' '_citation_author.identifier_ORCID' 5 2 'Structure model' '_citation_author.name' 6 3 'Structure model' '_citation.journal_volume' 7 3 'Structure model' '_citation.page_first' 8 3 'Structure model' '_citation.page_last' 9 4 'Structure model' '_database_2.pdbx_DOI' 10 4 'Structure model' '_database_2.pdbx_database_accession' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 27 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 28 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 29 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 30 4 'Structure model' '_pdbx_struct_conn_angle.value' 31 4 'Structure model' '_struct_conn.pdbx_dist_value' 32 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 33 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 34 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 35 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 36 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 37 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 38 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 39 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 40 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 41 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 42 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 43 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 44 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 45 4 'Structure model' '_struct_conn.ptnr2_symmetry' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -5.7111 -0.8276 20.9098 -0.2382 ? -0.0984 ? -0.0212 ? 0.0260 ? -0.0593 ? -0.1145 ? 2.6397 ? 1.5887 ? -0.0329 ? 2.7230 ? -0.1880 ? 2.1294 ? -0.1600 ? -0.1119 ? 0.5353 ? -0.2689 ? 0.0308 ? 0.5170 ? 0.1298 ? 0.0723 ? 0.1293 ? 2 'X-RAY DIFFRACTION' ? refined -3.5171 -10.8968 3.4609 -0.1165 ? -0.0598 ? 0.1358 ? 0.1446 ? -0.0326 ? -0.2930 ? 8.5681 ? 0.5408 ? 0.9967 ? 8.8451 ? -0.4024 ? 10.3608 ? -0.1909 ? 0.3163 ? 0.0977 ? 0.1078 ? -0.2048 ? 0.3490 ? 0.1948 ? -0.1880 ? 0.3957 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 361 ? ? A 573 ? '{ A|* }' 2 'X-RAY DIFFRACTION' 2 ? ? B 1 ? ? B 18 ? '{ B|* }' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? '2.10.3 (3-OCT-2019)' 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? 3.3.22 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 5 # _pdbx_entry_details.entry_id 6LDM _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N A PRO 379 ? ? CA A PRO 379 ? ? 1.685 1.468 0.217 0.017 N 2 1 N A PRO 396 ? ? CA A PRO 396 ? ? 1.685 1.468 0.217 0.017 N 3 1 N A PRO 474 ? ? CA A PRO 474 ? ? 1.689 1.468 0.221 0.017 N 4 1 N A PRO 570 ? ? CA A PRO 570 ? ? 1.690 1.468 0.222 0.017 N 5 1 "O3'" B DG 3 ? ? "C3'" B DG 3 ? ? 1.377 1.419 -0.042 0.006 N 6 1 "O3'" B DT 6 ? ? "C3'" B DT 6 ? ? 1.381 1.419 -0.038 0.006 N 7 1 "O3'" B DT 10 ? ? "C3'" B DT 10 ? ? 1.381 1.419 -0.038 0.006 N 8 1 "O3'" B DG 11 ? ? "C3'" B DG 11 ? ? 1.362 1.419 -0.057 0.006 N 9 1 "O3'" B DT 14 ? ? "C3'" B DT 14 ? ? 1.382 1.419 -0.037 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A ASN 378 ? ? N A PRO 379 ? ? CA A PRO 379 ? ? 137.86 119.30 18.56 1.50 Y 2 1 CA A PRO 379 ? ? N A PRO 379 ? ? CD A PRO 379 ? ? 100.33 111.70 -11.37 1.40 N 3 1 C A VAL 395 ? ? N A PRO 396 ? ? CA A PRO 396 ? ? 137.69 119.30 18.39 1.50 Y 4 1 CA A PRO 396 ? ? N A PRO 396 ? ? CD A PRO 396 ? ? 101.28 111.70 -10.42 1.40 N 5 1 C A ASP 473 ? ? N A PRO 474 ? ? CA A PRO 474 ? ? 137.61 119.30 18.31 1.50 Y 6 1 CA A PRO 474 ? ? N A PRO 474 ? ? CD A PRO 474 ? ? 101.05 111.70 -10.65 1.40 N 7 1 C A ARG 569 ? ? N A PRO 570 ? ? CA A PRO 570 ? ? 138.78 119.30 19.48 1.50 Y 8 1 CA A PRO 570 ? ? N A PRO 570 ? ? CD A PRO 570 ? ? 100.76 111.70 -10.94 1.40 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 410 ? ? -127.42 -59.92 2 1 GLU A 416 ? ? 69.97 -53.38 3 1 GLN A 515 ? ? 59.04 -131.53 4 1 PHE A 548 ? ? -99.98 -62.81 5 1 ASN A 568 ? ? 176.45 166.21 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 413 ? CG ? A LYS 107 CG 2 1 Y 1 A LYS 413 ? CD ? A LYS 107 CD 3 1 Y 1 A LYS 413 ? CE ? A LYS 107 CE 4 1 Y 1 A LYS 413 ? NZ ? A LYS 107 NZ 5 1 Y 1 A LYS 423 ? CG ? A LYS 117 CG 6 1 Y 1 A LYS 423 ? CD ? A LYS 117 CD 7 1 Y 1 A LYS 423 ? CE ? A LYS 117 CE 8 1 Y 1 A LYS 423 ? NZ ? A LYS 117 NZ 9 1 Y 1 A LYS 448 ? CG ? A LYS 142 CG 10 1 Y 1 A LYS 448 ? CD ? A LYS 142 CD 11 1 Y 1 A LYS 448 ? CE ? A LYS 142 CE 12 1 Y 1 A LYS 448 ? NZ ? A LYS 142 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 307 ? A HIS 1 2 1 Y 1 A HIS 308 ? A HIS 2 3 1 Y 1 A HIS 309 ? A HIS 3 4 1 Y 1 A HIS 310 ? A HIS 4 5 1 Y 1 A HIS 311 ? A HIS 5 6 1 Y 1 A HIS 312 ? A HIS 6 7 1 Y 1 A SER 313 ? A SER 7 8 1 Y 1 A SER 314 ? A SER 8 9 1 Y 1 A GLY 315 ? A GLY 9 10 1 Y 1 A LEU 316 ? A LEU 10 11 1 Y 1 A VAL 317 ? A VAL 11 12 1 Y 1 A PRO 318 ? A PRO 12 13 1 Y 1 A ARG 319 ? A ARG 13 14 1 Y 1 A GLY 320 ? A GLY 14 15 1 Y 1 A SER 321 ? A SER 15 16 1 Y 1 A GLY 322 ? A GLY 16 17 1 Y 1 A MET 323 ? A MET 17 18 1 Y 1 A LYS 324 ? A LYS 18 19 1 Y 1 A GLU 325 ? A GLU 19 20 1 Y 1 A THR 326 ? A THR 20 21 1 Y 1 A ALA 327 ? A ALA 21 22 1 Y 1 A ALA 328 ? A ALA 22 23 1 Y 1 A ALA 329 ? A ALA 23 24 1 Y 1 A LYS 330 ? A LYS 24 25 1 Y 1 A PHE 331 ? A PHE 25 26 1 Y 1 A GLU 332 ? A GLU 26 27 1 Y 1 A ARG 333 ? A ARG 27 28 1 Y 1 A GLN 334 ? A GLN 28 29 1 Y 1 A HIS 335 ? A HIS 29 30 1 Y 1 A MET 336 ? A MET 30 31 1 Y 1 A ASP 337 ? A ASP 31 32 1 Y 1 A SER 338 ? A SER 32 33 1 Y 1 A PRO 339 ? A PRO 33 34 1 Y 1 A ASP 340 ? A ASP 34 35 1 Y 1 A LEU 341 ? A LEU 35 36 1 Y 1 A GLY 342 ? A GLY 36 37 1 Y 1 A THR 343 ? A THR 37 38 1 Y 1 A GLY 344 ? A GLY 38 39 1 Y 1 A SER 345 ? A SER 39 40 1 Y 1 A GLU 346 ? A GLU 40 41 1 Y 1 A ASN 347 ? A ASN 41 42 1 Y 1 A LEU 348 ? A LEU 42 43 1 Y 1 A TYR 349 ? A TYR 43 44 1 Y 1 A PHE 350 ? A PHE 44 45 1 Y 1 A GLN 351 ? A GLN 45 46 1 Y 1 A GLY 352 ? A GLY 46 47 1 Y 1 A GLY 353 ? A GLY 47 48 1 Y 1 A ALA 354 ? A ALA 48 49 1 Y 1 A LEU 355 ? A LEU 49 50 1 Y 1 A PRO 356 ? A PRO 50 51 1 Y 1 A SER 357 ? A SER 51 52 1 Y 1 A HIS 358 ? A HIS 52 53 1 Y 1 A ASN 359 ? A ASN 53 54 1 Y 1 A LYS 360 ? A LYS 54 55 1 Y 1 A GLU 484 ? A GLU 178 56 1 Y 1 A ASP 485 ? A ASP 179 57 1 Y 1 A THR 486 ? A THR 180 58 1 Y 1 A PRO 487 ? A PRO 181 59 1 Y 1 A THR 488 ? A THR 182 60 1 Y 1 A ALA 489 ? A ALA 183 61 1 Y 1 A ILE 490 ? A ILE 184 62 1 Y 1 A ALA 491 ? A ALA 185 63 1 Y 1 A ARG 492 ? A ARG 186 64 1 Y 1 A ARG 493 ? A ARG 187 65 1 Y 1 A ASN 494 ? A ASN 188 66 1 Y 1 A MET 495 ? A MET 189 67 1 Y 1 A THR 496 ? A THR 190 68 1 Y 1 A MET 497 ? A MET 191 69 1 Y 1 A ASP 498 ? A ASP 192 70 1 Y 1 A PRO 499 ? A PRO 193 71 1 Y 1 A ASN 500 ? A ASN 194 72 1 Y 1 A HIS 501 ? A HIS 195 73 1 Y 1 A VAL 502 ? A VAL 196 74 1 Y 1 A PRO 503 ? A PRO 197 75 1 Y 1 A GLY 504 ? A GLY 198 76 1 Y 1 A SER 505 ? A SER 199 77 1 Y 1 A LYS 574 ? A LYS 268 78 1 Y 1 A ASN 575 ? A ASN 269 79 1 Y 1 A LEU 576 ? A LEU 270 80 1 Y 1 A THR 577 ? A THR 271 81 1 Y 1 A ASN 578 ? A ASN 272 82 1 Y 1 A ARG 579 ? A ARG 273 83 1 Y 1 A PRO 580 ? A PRO 274 84 1 Y 1 A LYS 581 ? A LYS 275 85 1 Y 1 A ARG 582 ? A ARG 276 86 1 Y 1 A PRO 583 ? A PRO 277 87 1 Y 1 A GLY 584 ? A GLY 278 88 1 Y 1 A VAL 585 ? A VAL 279 89 1 Y 1 A PRO 586 ? A PRO 280 90 1 Y 1 A THR 587 ? A THR 281 91 1 Y 1 A PRO 588 ? A PRO 282 92 1 Y 1 A GLY 589 ? A GLY 283 93 1 Y 1 A ASN 590 ? A ASN 284 94 1 Y 1 A TYR 591 ? A TYR 285 95 1 Y 1 A ASN 592 ? A ASN 286 96 1 Y 1 A SER 593 ? A SER 287 97 1 Y 1 A ALA 594 ? A ALA 288 98 1 Y 1 A ALA 595 ? A ALA 289 99 1 Y 1 A LYS 596 ? A LYS 290 100 1 Y 1 A ARG 597 ? A ARG 291 101 1 Y 1 B DT 19 ? B DT 19 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DG OP3 O N N 74 DG P P N N 75 DG OP1 O N N 76 DG OP2 O N N 77 DG "O5'" O N N 78 DG "C5'" C N N 79 DG "C4'" C N R 80 DG "O4'" O N N 81 DG "C3'" C N S 82 DG "O3'" O N N 83 DG "C2'" C N N 84 DG "C1'" C N R 85 DG N9 N Y N 86 DG C8 C Y N 87 DG N7 N Y N 88 DG C5 C Y N 89 DG C6 C N N 90 DG O6 O N N 91 DG N1 N N N 92 DG C2 C N N 93 DG N2 N N N 94 DG N3 N N N 95 DG C4 C Y N 96 DG HOP3 H N N 97 DG HOP2 H N N 98 DG "H5'" H N N 99 DG "H5''" H N N 100 DG "H4'" H N N 101 DG "H3'" H N N 102 DG "HO3'" H N N 103 DG "H2'" H N N 104 DG "H2''" H N N 105 DG "H1'" H N N 106 DG H8 H N N 107 DG H1 H N N 108 DG H21 H N N 109 DG H22 H N N 110 DT OP3 O N N 111 DT P P N N 112 DT OP1 O N N 113 DT OP2 O N N 114 DT "O5'" O N N 115 DT "C5'" C N N 116 DT "C4'" C N R 117 DT "O4'" O N N 118 DT "C3'" C N S 119 DT "O3'" O N N 120 DT "C2'" C N N 121 DT "C1'" C N R 122 DT N1 N N N 123 DT C2 C N N 124 DT O2 O N N 125 DT N3 N N N 126 DT C4 C N N 127 DT O4 O N N 128 DT C5 C N N 129 DT C7 C N N 130 DT C6 C N N 131 DT HOP3 H N N 132 DT HOP2 H N N 133 DT "H5'" H N N 134 DT "H5''" H N N 135 DT "H4'" H N N 136 DT "H3'" H N N 137 DT "HO3'" H N N 138 DT "H2'" H N N 139 DT "H2''" H N N 140 DT "H1'" H N N 141 DT H3 H N N 142 DT H71 H N N 143 DT H72 H N N 144 DT H73 H N N 145 DT H6 H N N 146 GLN N N N N 147 GLN CA C N S 148 GLN C C N N 149 GLN O O N N 150 GLN CB C N N 151 GLN CG C N N 152 GLN CD C N N 153 GLN OE1 O N N 154 GLN NE2 N N N 155 GLN OXT O N N 156 GLN H H N N 157 GLN H2 H N N 158 GLN HA H N N 159 GLN HB2 H N N 160 GLN HB3 H N N 161 GLN HG2 H N N 162 GLN HG3 H N N 163 GLN HE21 H N N 164 GLN HE22 H N N 165 GLN HXT H N N 166 GLU N N N N 167 GLU CA C N S 168 GLU C C N N 169 GLU O O N N 170 GLU CB C N N 171 GLU CG C N N 172 GLU CD C N N 173 GLU OE1 O N N 174 GLU OE2 O N N 175 GLU OXT O N N 176 GLU H H N N 177 GLU H2 H N N 178 GLU HA H N N 179 GLU HB2 H N N 180 GLU HB3 H N N 181 GLU HG2 H N N 182 GLU HG3 H N N 183 GLU HE2 H N N 184 GLU HXT H N N 185 GLY N N N N 186 GLY CA C N N 187 GLY C C N N 188 GLY O O N N 189 GLY OXT O N N 190 GLY H H N N 191 GLY H2 H N N 192 GLY HA2 H N N 193 GLY HA3 H N N 194 GLY HXT H N N 195 GOL C1 C N N 196 GOL O1 O N N 197 GOL C2 C N N 198 GOL O2 O N N 199 GOL C3 C N N 200 GOL O3 O N N 201 GOL H11 H N N 202 GOL H12 H N N 203 GOL HO1 H N N 204 GOL H2 H N N 205 GOL HO2 H N N 206 GOL H31 H N N 207 GOL H32 H N N 208 GOL HO3 H N N 209 HIS N N N N 210 HIS CA C N S 211 HIS C C N N 212 HIS O O N N 213 HIS CB C N N 214 HIS CG C Y N 215 HIS ND1 N Y N 216 HIS CD2 C Y N 217 HIS CE1 C Y N 218 HIS NE2 N Y N 219 HIS OXT O N N 220 HIS H H N N 221 HIS H2 H N N 222 HIS HA H N N 223 HIS HB2 H N N 224 HIS HB3 H N N 225 HIS HD1 H N N 226 HIS HD2 H N N 227 HIS HE1 H N N 228 HIS HE2 H N N 229 HIS HXT H N N 230 HOH O O N N 231 HOH H1 H N N 232 HOH H2 H N N 233 ILE N N N N 234 ILE CA C N S 235 ILE C C N N 236 ILE O O N N 237 ILE CB C N S 238 ILE CG1 C N N 239 ILE CG2 C N N 240 ILE CD1 C N N 241 ILE OXT O N N 242 ILE H H N N 243 ILE H2 H N N 244 ILE HA H N N 245 ILE HB H N N 246 ILE HG12 H N N 247 ILE HG13 H N N 248 ILE HG21 H N N 249 ILE HG22 H N N 250 ILE HG23 H N N 251 ILE HD11 H N N 252 ILE HD12 H N N 253 ILE HD13 H N N 254 ILE HXT H N N 255 K K K N N 256 LEU N N N N 257 LEU CA C N S 258 LEU C C N N 259 LEU O O N N 260 LEU CB C N N 261 LEU CG C N N 262 LEU CD1 C N N 263 LEU CD2 C N N 264 LEU OXT O N N 265 LEU H H N N 266 LEU H2 H N N 267 LEU HA H N N 268 LEU HB2 H N N 269 LEU HB3 H N N 270 LEU HG H N N 271 LEU HD11 H N N 272 LEU HD12 H N N 273 LEU HD13 H N N 274 LEU HD21 H N N 275 LEU HD22 H N N 276 LEU HD23 H N N 277 LEU HXT H N N 278 LYS N N N N 279 LYS CA C N S 280 LYS C C N N 281 LYS O O N N 282 LYS CB C N N 283 LYS CG C N N 284 LYS CD C N N 285 LYS CE C N N 286 LYS NZ N N N 287 LYS OXT O N N 288 LYS H H N N 289 LYS H2 H N N 290 LYS HA H N N 291 LYS HB2 H N N 292 LYS HB3 H N N 293 LYS HG2 H N N 294 LYS HG3 H N N 295 LYS HD2 H N N 296 LYS HD3 H N N 297 LYS HE2 H N N 298 LYS HE3 H N N 299 LYS HZ1 H N N 300 LYS HZ2 H N N 301 LYS HZ3 H N N 302 LYS HXT H N N 303 MET N N N N 304 MET CA C N S 305 MET C C N N 306 MET O O N N 307 MET CB C N N 308 MET CG C N N 309 MET SD S N N 310 MET CE C N N 311 MET OXT O N N 312 MET H H N N 313 MET H2 H N N 314 MET HA H N N 315 MET HB2 H N N 316 MET HB3 H N N 317 MET HG2 H N N 318 MET HG3 H N N 319 MET HE1 H N N 320 MET HE2 H N N 321 MET HE3 H N N 322 MET HXT H N N 323 NA NA NA N N 324 PHE N N N N 325 PHE CA C N S 326 PHE C C N N 327 PHE O O N N 328 PHE CB C N N 329 PHE CG C Y N 330 PHE CD1 C Y N 331 PHE CD2 C Y N 332 PHE CE1 C Y N 333 PHE CE2 C Y N 334 PHE CZ C Y N 335 PHE OXT O N N 336 PHE H H N N 337 PHE H2 H N N 338 PHE HA H N N 339 PHE HB2 H N N 340 PHE HB3 H N N 341 PHE HD1 H N N 342 PHE HD2 H N N 343 PHE HE1 H N N 344 PHE HE2 H N N 345 PHE HZ H N N 346 PHE HXT H N N 347 PRO N N N N 348 PRO CA C N S 349 PRO C C N N 350 PRO O O N N 351 PRO CB C N N 352 PRO CG C N N 353 PRO CD C N N 354 PRO OXT O N N 355 PRO H H N N 356 PRO HA H N N 357 PRO HB2 H N N 358 PRO HB3 H N N 359 PRO HG2 H N N 360 PRO HG3 H N N 361 PRO HD2 H N N 362 PRO HD3 H N N 363 PRO HXT H N N 364 SER N N N N 365 SER CA C N S 366 SER C C N N 367 SER O O N N 368 SER CB C N N 369 SER OG O N N 370 SER OXT O N N 371 SER H H N N 372 SER H2 H N N 373 SER HA H N N 374 SER HB2 H N N 375 SER HB3 H N N 376 SER HG H N N 377 SER HXT H N N 378 THR N N N N 379 THR CA C N S 380 THR C C N N 381 THR O O N N 382 THR CB C N R 383 THR OG1 O N N 384 THR CG2 C N N 385 THR OXT O N N 386 THR H H N N 387 THR H2 H N N 388 THR HA H N N 389 THR HB H N N 390 THR HG1 H N N 391 THR HG21 H N N 392 THR HG22 H N N 393 THR HG23 H N N 394 THR HXT H N N 395 TRP N N N N 396 TRP CA C N S 397 TRP C C N N 398 TRP O O N N 399 TRP CB C N N 400 TRP CG C Y N 401 TRP CD1 C Y N 402 TRP CD2 C Y N 403 TRP NE1 N Y N 404 TRP CE2 C Y N 405 TRP CE3 C Y N 406 TRP CZ2 C Y N 407 TRP CZ3 C Y N 408 TRP CH2 C Y N 409 TRP OXT O N N 410 TRP H H N N 411 TRP H2 H N N 412 TRP HA H N N 413 TRP HB2 H N N 414 TRP HB3 H N N 415 TRP HD1 H N N 416 TRP HE1 H N N 417 TRP HE3 H N N 418 TRP HZ2 H N N 419 TRP HZ3 H N N 420 TRP HH2 H N N 421 TRP HXT H N N 422 TRS C C N N 423 TRS C1 C N N 424 TRS C2 C N N 425 TRS C3 C N N 426 TRS N N N N 427 TRS O1 O N N 428 TRS O2 O N N 429 TRS O3 O N N 430 TRS H11 H N N 431 TRS H12 H N N 432 TRS H21 H N N 433 TRS H22 H N N 434 TRS H31 H N N 435 TRS H32 H N N 436 TRS HN1 H N N 437 TRS HN2 H N N 438 TRS HN3 H N N 439 TRS HO1 H N N 440 TRS HO2 H N N 441 TRS HO3 H N N 442 TYR N N N N 443 TYR CA C N S 444 TYR C C N N 445 TYR O O N N 446 TYR CB C N N 447 TYR CG C Y N 448 TYR CD1 C Y N 449 TYR CD2 C Y N 450 TYR CE1 C Y N 451 TYR CE2 C Y N 452 TYR CZ C Y N 453 TYR OH O N N 454 TYR OXT O N N 455 TYR H H N N 456 TYR H2 H N N 457 TYR HA H N N 458 TYR HB2 H N N 459 TYR HB3 H N N 460 TYR HD1 H N N 461 TYR HD2 H N N 462 TYR HE1 H N N 463 TYR HE2 H N N 464 TYR HH H N N 465 TYR HXT H N N 466 VAL N N N N 467 VAL CA C N S 468 VAL C C N N 469 VAL O O N N 470 VAL CB C N N 471 VAL CG1 C N N 472 VAL CG2 C N N 473 VAL OXT O N N 474 VAL H H N N 475 VAL H2 H N N 476 VAL HA H N N 477 VAL HB H N N 478 VAL HG11 H N N 479 VAL HG12 H N N 480 VAL HG13 H N N 481 VAL HG21 H N N 482 VAL HG22 H N N 483 VAL HG23 H N N 484 VAL HXT H N N 485 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DG OP3 P sing N N 70 DG OP3 HOP3 sing N N 71 DG P OP1 doub N N 72 DG P OP2 sing N N 73 DG P "O5'" sing N N 74 DG OP2 HOP2 sing N N 75 DG "O5'" "C5'" sing N N 76 DG "C5'" "C4'" sing N N 77 DG "C5'" "H5'" sing N N 78 DG "C5'" "H5''" sing N N 79 DG "C4'" "O4'" sing N N 80 DG "C4'" "C3'" sing N N 81 DG "C4'" "H4'" sing N N 82 DG "O4'" "C1'" sing N N 83 DG "C3'" "O3'" sing N N 84 DG "C3'" "C2'" sing N N 85 DG "C3'" "H3'" sing N N 86 DG "O3'" "HO3'" sing N N 87 DG "C2'" "C1'" sing N N 88 DG "C2'" "H2'" sing N N 89 DG "C2'" "H2''" sing N N 90 DG "C1'" N9 sing N N 91 DG "C1'" "H1'" sing N N 92 DG N9 C8 sing Y N 93 DG N9 C4 sing Y N 94 DG C8 N7 doub Y N 95 DG C8 H8 sing N N 96 DG N7 C5 sing Y N 97 DG C5 C6 sing N N 98 DG C5 C4 doub Y N 99 DG C6 O6 doub N N 100 DG C6 N1 sing N N 101 DG N1 C2 sing N N 102 DG N1 H1 sing N N 103 DG C2 N2 sing N N 104 DG C2 N3 doub N N 105 DG N2 H21 sing N N 106 DG N2 H22 sing N N 107 DG N3 C4 sing N N 108 DT OP3 P sing N N 109 DT OP3 HOP3 sing N N 110 DT P OP1 doub N N 111 DT P OP2 sing N N 112 DT P "O5'" sing N N 113 DT OP2 HOP2 sing N N 114 DT "O5'" "C5'" sing N N 115 DT "C5'" "C4'" sing N N 116 DT "C5'" "H5'" sing N N 117 DT "C5'" "H5''" sing N N 118 DT "C4'" "O4'" sing N N 119 DT "C4'" "C3'" sing N N 120 DT "C4'" "H4'" sing N N 121 DT "O4'" "C1'" sing N N 122 DT "C3'" "O3'" sing N N 123 DT "C3'" "C2'" sing N N 124 DT "C3'" "H3'" sing N N 125 DT "O3'" "HO3'" sing N N 126 DT "C2'" "C1'" sing N N 127 DT "C2'" "H2'" sing N N 128 DT "C2'" "H2''" sing N N 129 DT "C1'" N1 sing N N 130 DT "C1'" "H1'" sing N N 131 DT N1 C2 sing N N 132 DT N1 C6 sing N N 133 DT C2 O2 doub N N 134 DT C2 N3 sing N N 135 DT N3 C4 sing N N 136 DT N3 H3 sing N N 137 DT C4 O4 doub N N 138 DT C4 C5 sing N N 139 DT C5 C7 sing N N 140 DT C5 C6 doub N N 141 DT C7 H71 sing N N 142 DT C7 H72 sing N N 143 DT C7 H73 sing N N 144 DT C6 H6 sing N N 145 GLN N CA sing N N 146 GLN N H sing N N 147 GLN N H2 sing N N 148 GLN CA C sing N N 149 GLN CA CB sing N N 150 GLN CA HA sing N N 151 GLN C O doub N N 152 GLN C OXT sing N N 153 GLN CB CG sing N N 154 GLN CB HB2 sing N N 155 GLN CB HB3 sing N N 156 GLN CG CD sing N N 157 GLN CG HG2 sing N N 158 GLN CG HG3 sing N N 159 GLN CD OE1 doub N N 160 GLN CD NE2 sing N N 161 GLN NE2 HE21 sing N N 162 GLN NE2 HE22 sing N N 163 GLN OXT HXT sing N N 164 GLU N CA sing N N 165 GLU N H sing N N 166 GLU N H2 sing N N 167 GLU CA C sing N N 168 GLU CA CB sing N N 169 GLU CA HA sing N N 170 GLU C O doub N N 171 GLU C OXT sing N N 172 GLU CB CG sing N N 173 GLU CB HB2 sing N N 174 GLU CB HB3 sing N N 175 GLU CG CD sing N N 176 GLU CG HG2 sing N N 177 GLU CG HG3 sing N N 178 GLU CD OE1 doub N N 179 GLU CD OE2 sing N N 180 GLU OE2 HE2 sing N N 181 GLU OXT HXT sing N N 182 GLY N CA sing N N 183 GLY N H sing N N 184 GLY N H2 sing N N 185 GLY CA C sing N N 186 GLY CA HA2 sing N N 187 GLY CA HA3 sing N N 188 GLY C O doub N N 189 GLY C OXT sing N N 190 GLY OXT HXT sing N N 191 GOL C1 O1 sing N N 192 GOL C1 C2 sing N N 193 GOL C1 H11 sing N N 194 GOL C1 H12 sing N N 195 GOL O1 HO1 sing N N 196 GOL C2 O2 sing N N 197 GOL C2 C3 sing N N 198 GOL C2 H2 sing N N 199 GOL O2 HO2 sing N N 200 GOL C3 O3 sing N N 201 GOL C3 H31 sing N N 202 GOL C3 H32 sing N N 203 GOL O3 HO3 sing N N 204 HIS N CA sing N N 205 HIS N H sing N N 206 HIS N H2 sing N N 207 HIS CA C sing N N 208 HIS CA CB sing N N 209 HIS CA HA sing N N 210 HIS C O doub N N 211 HIS C OXT sing N N 212 HIS CB CG sing N N 213 HIS CB HB2 sing N N 214 HIS CB HB3 sing N N 215 HIS CG ND1 sing Y N 216 HIS CG CD2 doub Y N 217 HIS ND1 CE1 doub Y N 218 HIS ND1 HD1 sing N N 219 HIS CD2 NE2 sing Y N 220 HIS CD2 HD2 sing N N 221 HIS CE1 NE2 sing Y N 222 HIS CE1 HE1 sing N N 223 HIS NE2 HE2 sing N N 224 HIS OXT HXT sing N N 225 HOH O H1 sing N N 226 HOH O H2 sing N N 227 ILE N CA sing N N 228 ILE N H sing N N 229 ILE N H2 sing N N 230 ILE CA C sing N N 231 ILE CA CB sing N N 232 ILE CA HA sing N N 233 ILE C O doub N N 234 ILE C OXT sing N N 235 ILE CB CG1 sing N N 236 ILE CB CG2 sing N N 237 ILE CB HB sing N N 238 ILE CG1 CD1 sing N N 239 ILE CG1 HG12 sing N N 240 ILE CG1 HG13 sing N N 241 ILE CG2 HG21 sing N N 242 ILE CG2 HG22 sing N N 243 ILE CG2 HG23 sing N N 244 ILE CD1 HD11 sing N N 245 ILE CD1 HD12 sing N N 246 ILE CD1 HD13 sing N N 247 ILE OXT HXT sing N N 248 LEU N CA sing N N 249 LEU N H sing N N 250 LEU N H2 sing N N 251 LEU CA C sing N N 252 LEU CA CB sing N N 253 LEU CA HA sing N N 254 LEU C O doub N N 255 LEU C OXT sing N N 256 LEU CB CG sing N N 257 LEU CB HB2 sing N N 258 LEU CB HB3 sing N N 259 LEU CG CD1 sing N N 260 LEU CG CD2 sing N N 261 LEU CG HG sing N N 262 LEU CD1 HD11 sing N N 263 LEU CD1 HD12 sing N N 264 LEU CD1 HD13 sing N N 265 LEU CD2 HD21 sing N N 266 LEU CD2 HD22 sing N N 267 LEU CD2 HD23 sing N N 268 LEU OXT HXT sing N N 269 LYS N CA sing N N 270 LYS N H sing N N 271 LYS N H2 sing N N 272 LYS CA C sing N N 273 LYS CA CB sing N N 274 LYS CA HA sing N N 275 LYS C O doub N N 276 LYS C OXT sing N N 277 LYS CB CG sing N N 278 LYS CB HB2 sing N N 279 LYS CB HB3 sing N N 280 LYS CG CD sing N N 281 LYS CG HG2 sing N N 282 LYS CG HG3 sing N N 283 LYS CD CE sing N N 284 LYS CD HD2 sing N N 285 LYS CD HD3 sing N N 286 LYS CE NZ sing N N 287 LYS CE HE2 sing N N 288 LYS CE HE3 sing N N 289 LYS NZ HZ1 sing N N 290 LYS NZ HZ2 sing N N 291 LYS NZ HZ3 sing N N 292 LYS OXT HXT sing N N 293 MET N CA sing N N 294 MET N H sing N N 295 MET N H2 sing N N 296 MET CA C sing N N 297 MET CA CB sing N N 298 MET CA HA sing N N 299 MET C O doub N N 300 MET C OXT sing N N 301 MET CB CG sing N N 302 MET CB HB2 sing N N 303 MET CB HB3 sing N N 304 MET CG SD sing N N 305 MET CG HG2 sing N N 306 MET CG HG3 sing N N 307 MET SD CE sing N N 308 MET CE HE1 sing N N 309 MET CE HE2 sing N N 310 MET CE HE3 sing N N 311 MET OXT HXT sing N N 312 PHE N CA sing N N 313 PHE N H sing N N 314 PHE N H2 sing N N 315 PHE CA C sing N N 316 PHE CA CB sing N N 317 PHE CA HA sing N N 318 PHE C O doub N N 319 PHE C OXT sing N N 320 PHE CB CG sing N N 321 PHE CB HB2 sing N N 322 PHE CB HB3 sing N N 323 PHE CG CD1 doub Y N 324 PHE CG CD2 sing Y N 325 PHE CD1 CE1 sing Y N 326 PHE CD1 HD1 sing N N 327 PHE CD2 CE2 doub Y N 328 PHE CD2 HD2 sing N N 329 PHE CE1 CZ doub Y N 330 PHE CE1 HE1 sing N N 331 PHE CE2 CZ sing Y N 332 PHE CE2 HE2 sing N N 333 PHE CZ HZ sing N N 334 PHE OXT HXT sing N N 335 PRO N CA sing N N 336 PRO N CD sing N N 337 PRO N H sing N N 338 PRO CA C sing N N 339 PRO CA CB sing N N 340 PRO CA HA sing N N 341 PRO C O doub N N 342 PRO C OXT sing N N 343 PRO CB CG sing N N 344 PRO CB HB2 sing N N 345 PRO CB HB3 sing N N 346 PRO CG CD sing N N 347 PRO CG HG2 sing N N 348 PRO CG HG3 sing N N 349 PRO CD HD2 sing N N 350 PRO CD HD3 sing N N 351 PRO OXT HXT sing N N 352 SER N CA sing N N 353 SER N H sing N N 354 SER N H2 sing N N 355 SER CA C sing N N 356 SER CA CB sing N N 357 SER CA HA sing N N 358 SER C O doub N N 359 SER C OXT sing N N 360 SER CB OG sing N N 361 SER CB HB2 sing N N 362 SER CB HB3 sing N N 363 SER OG HG sing N N 364 SER OXT HXT sing N N 365 THR N CA sing N N 366 THR N H sing N N 367 THR N H2 sing N N 368 THR CA C sing N N 369 THR CA CB sing N N 370 THR CA HA sing N N 371 THR C O doub N N 372 THR C OXT sing N N 373 THR CB OG1 sing N N 374 THR CB CG2 sing N N 375 THR CB HB sing N N 376 THR OG1 HG1 sing N N 377 THR CG2 HG21 sing N N 378 THR CG2 HG22 sing N N 379 THR CG2 HG23 sing N N 380 THR OXT HXT sing N N 381 TRP N CA sing N N 382 TRP N H sing N N 383 TRP N H2 sing N N 384 TRP CA C sing N N 385 TRP CA CB sing N N 386 TRP CA HA sing N N 387 TRP C O doub N N 388 TRP C OXT sing N N 389 TRP CB CG sing N N 390 TRP CB HB2 sing N N 391 TRP CB HB3 sing N N 392 TRP CG CD1 doub Y N 393 TRP CG CD2 sing Y N 394 TRP CD1 NE1 sing Y N 395 TRP CD1 HD1 sing N N 396 TRP CD2 CE2 doub Y N 397 TRP CD2 CE3 sing Y N 398 TRP NE1 CE2 sing Y N 399 TRP NE1 HE1 sing N N 400 TRP CE2 CZ2 sing Y N 401 TRP CE3 CZ3 doub Y N 402 TRP CE3 HE3 sing N N 403 TRP CZ2 CH2 doub Y N 404 TRP CZ2 HZ2 sing N N 405 TRP CZ3 CH2 sing Y N 406 TRP CZ3 HZ3 sing N N 407 TRP CH2 HH2 sing N N 408 TRP OXT HXT sing N N 409 TRS C C1 sing N N 410 TRS C C2 sing N N 411 TRS C C3 sing N N 412 TRS C N sing N N 413 TRS C1 O1 sing N N 414 TRS C1 H11 sing N N 415 TRS C1 H12 sing N N 416 TRS C2 O2 sing N N 417 TRS C2 H21 sing N N 418 TRS C2 H22 sing N N 419 TRS C3 O3 sing N N 420 TRS C3 H31 sing N N 421 TRS C3 H32 sing N N 422 TRS N HN1 sing N N 423 TRS N HN2 sing N N 424 TRS N HN3 sing N N 425 TRS O1 HO1 sing N N 426 TRS O2 HO2 sing N N 427 TRS O3 HO3 sing N N 428 TYR N CA sing N N 429 TYR N H sing N N 430 TYR N H2 sing N N 431 TYR CA C sing N N 432 TYR CA CB sing N N 433 TYR CA HA sing N N 434 TYR C O doub N N 435 TYR C OXT sing N N 436 TYR CB CG sing N N 437 TYR CB HB2 sing N N 438 TYR CB HB3 sing N N 439 TYR CG CD1 doub Y N 440 TYR CG CD2 sing Y N 441 TYR CD1 CE1 sing Y N 442 TYR CD1 HD1 sing N N 443 TYR CD2 CE2 doub Y N 444 TYR CD2 HD2 sing N N 445 TYR CE1 CZ doub Y N 446 TYR CE1 HE1 sing N N 447 TYR CE2 CZ sing Y N 448 TYR CE2 HE2 sing N N 449 TYR CZ OH sing N N 450 TYR OH HH sing N N 451 TYR OXT HXT sing N N 452 VAL N CA sing N N 453 VAL N H sing N N 454 VAL N H2 sing N N 455 VAL CA C sing N N 456 VAL CA CB sing N N 457 VAL CA HA sing N N 458 VAL C O doub N N 459 VAL C OXT sing N N 460 VAL CB CG1 sing N N 461 VAL CB CG2 sing N N 462 VAL CB HB sing N N 463 VAL CG1 HG11 sing N N 464 VAL CG1 HG12 sing N N 465 VAL CG1 HG13 sing N N 466 VAL CG2 HG21 sing N N 467 VAL CG2 HG22 sing N N 468 VAL CG2 HG23 sing N N 469 VAL OXT HXT sing N N 470 # _ndb_struct_conf_na.entry_id 6LDM _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 3 1_555 B DG 7 1_555 1.262 3.619 0.007 -0.390 -3.213 -93.419 1 B_DG3:DG7_B B 3 ? B 7 ? 6 3 1 B DG 4 1_555 B DG 8 1_555 1.667 3.223 0.060 0.416 -6.720 -89.138 2 B_DG4:DG8_B B 4 ? B 8 ? 6 3 1 B DG 16 1_555 B DG 12 1_555 -1.569 -3.332 0.170 -0.256 6.506 94.063 3 B_DG16:DG12_B B 16 ? B 12 ? 6 3 1 B DG 15 1_555 B DG 11 1_555 -1.566 -3.572 0.287 0.508 1.754 89.660 4 B_DG15:DG11_B B 15 ? B 11 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 3 1_555 B DG 7 1_555 B DG 4 1_555 B DG 8 1_555 -0.328 -0.688 3.255 0.990 3.220 32.120 -1.799 0.762 3.162 5.799 -1.783 32.291 1 BB_DG3DG4:DG8DG7_BB B 3 ? B 7 ? B 4 ? B 8 ? 1 B DG 4 1_555 B DG 8 1_555 B DG 16 1_555 B DG 12 1_555 -1.731 -3.354 0.028 -4.231 6.861 178.217 -1.677 0.866 0.026 3.431 2.116 178.221 2 BB_DG4DG16:DG12DG8_BB B 4 ? B 8 ? B 16 ? B 12 ? 1 B DG 16 1_555 B DG 12 1_555 B DG 15 1_555 B DG 11 1_555 0.453 0.776 -3.224 -1.847 -3.315 -29.643 -2.172 1.250 -3.087 6.446 -3.591 -29.880 3 BB_DG16DG15:DG11DG12_BB B 16 ? B 12 ? B 15 ? B 11 ? # _pdbx_audit_support.funding_organization 'Ministry of Education (MoE, Singapore)' _pdbx_audit_support.country Singapore _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 GLYCEROL GOL 4 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRS 5 'SODIUM ION' NA 6 'POTASSIUM ION' K 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1IGN _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? #