HEADER DNA BINDING PROTEIN/DNA 22-NOV-19 6LDM TITLE STRUCTURAL BASIS OF G-QUADRUPLEX DNA RECOGNITION BY THE YEAST TITLE 2 TELOMERIC PROTEIN RAP1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-BINDING PROTEIN RAP1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: REPRESSOR/ACTIVATOR SITE-BINDING PROTEIN,SBF-E,TUF; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: G-GUADRUPLEX DNA; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C); SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292; SOURCE 6 STRAIN: ATCC 204508 / S288C; SOURCE 7 GENE: RAP1, GRF1, TUF1, YNL216W, N1310; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21-(DE3)-RIPL; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PET30A-TEV; SOURCE 13 MOL_ID: 2; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 16 ORGANISM_TAXID: 32630 KEYWDS COMPLEX, G-QUADRUPLEX, DNA, DNA BINDING PROTEIN, DNA BINDING PROTEIN- KEYWDS 2 DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.TRACZYK,D.J.GILL,W.L.CHONG,D.RHODES REVDAT 4 22-NOV-23 6LDM 1 LINK REVDAT 3 13-MAY-20 6LDM 1 JRNL REVDAT 2 01-APR-20 6LDM 1 JRNL REVDAT 1 18-MAR-20 6LDM 0 JRNL AUTH A.TRACZYK,C.W.LIEW,D.J.GILL,D.RHODES JRNL TITL STRUCTURAL BASIS OF G-QUADRUPLEX DNA RECOGNITION BY THE JRNL TITL 2 YEAST TELOMERIC PROTEIN RAP1. JRNL REF NUCLEIC ACIDS RES. V. 48 4562 2020 JRNL REFN ESSN 1362-4962 JRNL PMID 32187364 JRNL DOI 10.1093/NAR/GKAA171 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 (3-OCT-2019) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.09 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 14665 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 737 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.53 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.35 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 382 REMARK 3 BIN R VALUE (WORKING SET) : 0.2356 REMARK 3 BIN FREE R VALUE : 0.2512 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.37 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 26 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1598 REMARK 3 NUCLEIC ACID ATOMS : 384 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 43 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 71.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.99760 REMARK 3 B22 (A**2) : 5.25990 REMARK 3 B33 (A**2) : -1.26230 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.09620 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.340 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.266 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.204 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.274 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.208 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2082 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2898 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 667 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 302 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2082 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 262 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1339 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 0.89 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.95 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.55 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -5.7111 -0.8276 20.9098 REMARK 3 T TENSOR REMARK 3 T11: -0.2382 T22: 0.0260 REMARK 3 T33: -0.1145 T12: -0.0984 REMARK 3 T13: -0.0212 T23: -0.0593 REMARK 3 L TENSOR REMARK 3 L11: 2.6397 L22: 2.7230 REMARK 3 L33: 2.1294 L12: 1.5887 REMARK 3 L13: -0.0329 L23: -0.1880 REMARK 3 S TENSOR REMARK 3 S11: -0.1600 S12: -0.1119 S13: 0.5353 REMARK 3 S21: -0.2689 S22: 0.0308 S23: 0.5170 REMARK 3 S31: 0.1298 S32: 0.0723 S33: 0.1293 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -3.5171 -10.8968 3.4609 REMARK 3 T TENSOR REMARK 3 T11: -0.1165 T22: 0.1446 REMARK 3 T33: -0.2930 T12: -0.0598 REMARK 3 T13: 0.1358 T23: -0.0326 REMARK 3 L TENSOR REMARK 3 L11: 8.5681 L22: 8.8451 REMARK 3 L33: 10.3608 L12: 0.5408 REMARK 3 L13: 0.9967 L23: -0.4024 REMARK 3 S TENSOR REMARK 3 S11: -0.1909 S12: 0.3163 S13: 0.0977 REMARK 3 S21: 0.1078 S22: -0.2048 S23: 0.3490 REMARK 3 S31: 0.1948 S32: -0.1880 S33: 0.3957 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6LDM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1300014598. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-SEP-15 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.22 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14665 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 64.262 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05500 REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.40600 REMARK 200 R SYM FOR SHELL (I) : 0.40600 REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1IGN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CITRATE TRIBASIC DIHYDRATE REMARK 280 PH 5.6, 10% ISOPROPANOL, 14% PEG 4000, 10% OF GLYCEROL, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 42.34000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.10000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 42.34000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.10000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -124.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 K K B 103 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 307 REMARK 465 HIS A 308 REMARK 465 HIS A 309 REMARK 465 HIS A 310 REMARK 465 HIS A 311 REMARK 465 HIS A 312 REMARK 465 SER A 313 REMARK 465 SER A 314 REMARK 465 GLY A 315 REMARK 465 LEU A 316 REMARK 465 VAL A 317 REMARK 465 PRO A 318 REMARK 465 ARG A 319 REMARK 465 GLY A 320 REMARK 465 SER A 321 REMARK 465 GLY A 322 REMARK 465 MET A 323 REMARK 465 LYS A 324 REMARK 465 GLU A 325 REMARK 465 THR A 326 REMARK 465 ALA A 327 REMARK 465 ALA A 328 REMARK 465 ALA A 329 REMARK 465 LYS A 330 REMARK 465 PHE A 331 REMARK 465 GLU A 332 REMARK 465 ARG A 333 REMARK 465 GLN A 334 REMARK 465 HIS A 335 REMARK 465 MET A 336 REMARK 465 ASP A 337 REMARK 465 SER A 338 REMARK 465 PRO A 339 REMARK 465 ASP A 340 REMARK 465 LEU A 341 REMARK 465 GLY A 342 REMARK 465 THR A 343 REMARK 465 GLY A 344 REMARK 465 SER A 345 REMARK 465 GLU A 346 REMARK 465 ASN A 347 REMARK 465 LEU A 348 REMARK 465 TYR A 349 REMARK 465 PHE A 350 REMARK 465 GLN A 351 REMARK 465 GLY A 352 REMARK 465 GLY A 353 REMARK 465 ALA A 354 REMARK 465 LEU A 355 REMARK 465 PRO A 356 REMARK 465 SER A 357 REMARK 465 HIS A 358 REMARK 465 ASN A 359 REMARK 465 LYS A 360 REMARK 465 GLU A 484 REMARK 465 ASP A 485 REMARK 465 THR A 486 REMARK 465 PRO A 487 REMARK 465 THR A 488 REMARK 465 ALA A 489 REMARK 465 ILE A 490 REMARK 465 ALA A 491 REMARK 465 ARG A 492 REMARK 465 ARG A 493 REMARK 465 ASN A 494 REMARK 465 MET A 495 REMARK 465 THR A 496 REMARK 465 MET A 497 REMARK 465 ASP A 498 REMARK 465 PRO A 499 REMARK 465 ASN A 500 REMARK 465 HIS A 501 REMARK 465 VAL A 502 REMARK 465 PRO A 503 REMARK 465 GLY A 504 REMARK 465 SER A 505 REMARK 465 LYS A 574 REMARK 465 ASN A 575 REMARK 465 LEU A 576 REMARK 465 THR A 577 REMARK 465 ASN A 578 REMARK 465 ARG A 579 REMARK 465 PRO A 580 REMARK 465 LYS A 581 REMARK 465 ARG A 582 REMARK 465 PRO A 583 REMARK 465 GLY A 584 REMARK 465 VAL A 585 REMARK 465 PRO A 586 REMARK 465 THR A 587 REMARK 465 PRO A 588 REMARK 465 GLY A 589 REMARK 465 ASN A 590 REMARK 465 TYR A 591 REMARK 465 ASN A 592 REMARK 465 SER A 593 REMARK 465 ALA A 594 REMARK 465 ALA A 595 REMARK 465 LYS A 596 REMARK 465 ARG A 597 REMARK 465 DT B 19 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 413 CG CD CE NZ REMARK 470 LYS A 423 CG CD CE NZ REMARK 470 LYS A 448 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO A 379 N PRO A 379 CA 0.217 REMARK 500 PRO A 396 N PRO A 396 CA 0.217 REMARK 500 PRO A 474 N PRO A 474 CA 0.221 REMARK 500 PRO A 570 N PRO A 570 CA 0.222 REMARK 500 DG B 3 O3' DG B 3 C3' -0.042 REMARK 500 DT B 6 O3' DT B 6 C3' -0.038 REMARK 500 DT B 10 O3' DT B 10 C3' -0.038 REMARK 500 DG B 11 O3' DG B 11 C3' -0.057 REMARK 500 DT B 14 O3' DT B 14 C3' -0.037 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 379 C - N - CA ANGL. DEV. = 18.6 DEGREES REMARK 500 PRO A 379 CA - N - CD ANGL. DEV. = -11.4 DEGREES REMARK 500 PRO A 396 C - N - CA ANGL. DEV. = 18.4 DEGREES REMARK 500 PRO A 396 CA - N - CD ANGL. DEV. = -10.4 DEGREES REMARK 500 PRO A 474 C - N - CA ANGL. DEV. = 18.3 DEGREES REMARK 500 PRO A 474 CA - N - CD ANGL. DEV. = -10.7 DEGREES REMARK 500 PRO A 570 C - N - CA ANGL. DEV. = 19.5 DEGREES REMARK 500 PRO A 570 CA - N - CD ANGL. DEV. = -10.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 410 -59.92 -127.42 REMARK 500 GLU A 416 -53.38 69.97 REMARK 500 GLN A 515 -131.53 59.04 REMARK 500 PHE A 548 -62.81 -99.98 REMARK 500 ASN A 568 166.21 176.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 605 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 361 O REMARK 620 2 HOH B 213 O 153.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 113 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 706 O REMARK 620 2 HOH B 208 O 104.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 102 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG B 3 O6 REMARK 620 2 DG B 4 O6 77.2 REMARK 620 3 DG B 7 O6 65.1 96.2 REMARK 620 4 DG B 8 O6 127.1 72.6 76.1 REMARK 620 5 DG B 11 O6 103.4 160.3 67.1 92.4 REMARK 620 6 DG B 12 O6 158.9 112.3 129.3 74.0 74.2 REMARK 620 7 DG B 15 O6 72.4 129.7 105.7 156.1 67.5 87.7 REMARK 620 8 DG B 16 O6 97.4 73.7 161.7 114.0 125.2 69.0 71.7 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 103 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG B 3 O6 REMARK 620 2 DG B 3 O6 0.0 REMARK 620 3 DG B 7 O6 68.9 68.9 REMARK 620 4 DG B 7 O6 68.9 68.9 0.0 REMARK 620 5 DG B 11 O6 110.1 110.1 68.4 68.4 REMARK 620 6 DG B 11 O6 110.1 110.1 68.4 68.4 0.0 REMARK 620 7 DG B 15 O6 75.5 75.5 107.2 107.2 67.9 67.9 REMARK 620 8 DG B 15 O6 75.5 75.5 107.2 107.2 67.9 67.9 0.0 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 104 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG B 3 OP2 REMARK 620 2 DG B 3 O5' 62.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 101 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG B 4 O6 REMARK 620 2 DG B 5 O6 74.5 REMARK 620 3 DG B 8 O6 67.0 86.7 REMARK 620 4 DG B 9 O6 132.2 74.8 75.6 REMARK 620 5 DG B 12 O6 105.7 155.7 71.7 88.9 REMARK 620 6 DG B 13 O6 152.0 116.3 135.9 75.3 75.2 REMARK 620 7 DG B 16 O6 68.9 131.3 106.5 153.5 67.7 86.5 REMARK 620 8 DG B 17 O6 85.5 73.8 149.9 119.2 130.4 74.1 72.4 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 108 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG B 5 O4' REMARK 620 2 DG B 7 OP1 113.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 111 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG B 11 OP1 REMARK 620 2 HOH B 210 O 132.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 109 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG B 17 O6 REMARK 620 2 HOH B 209 O 118.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 107 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 202 O REMARK 620 2 HOH B 207 O 105.8 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TRS A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K B 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K B 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K B 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 107 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 108 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 109 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 110 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 111 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 112 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 113 DBREF 6LDM A 353 597 UNP P11938 RAP1_YEAST 353 598 DBREF 6LDM B 1 19 PDB 6LDM 6LDM 1 19 SEQADV 6LDM HIS A 307 UNP P11938 EXPRESSION TAG SEQADV 6LDM HIS A 308 UNP P11938 EXPRESSION TAG SEQADV 6LDM HIS A 309 UNP P11938 EXPRESSION TAG SEQADV 6LDM HIS A 310 UNP P11938 EXPRESSION TAG SEQADV 6LDM HIS A 311 UNP P11938 EXPRESSION TAG SEQADV 6LDM HIS A 312 UNP P11938 EXPRESSION TAG SEQADV 6LDM SER A 313 UNP P11938 EXPRESSION TAG SEQADV 6LDM SER A 314 UNP P11938 EXPRESSION TAG SEQADV 6LDM GLY A 315 UNP P11938 EXPRESSION TAG SEQADV 6LDM LEU A 316 UNP P11938 EXPRESSION TAG SEQADV 6LDM VAL A 317 UNP P11938 EXPRESSION TAG SEQADV 6LDM PRO A 318 UNP P11938 EXPRESSION TAG SEQADV 6LDM ARG A 319 UNP P11938 EXPRESSION TAG SEQADV 6LDM GLY A 320 UNP P11938 EXPRESSION TAG SEQADV 6LDM SER A 321 UNP P11938 EXPRESSION TAG SEQADV 6LDM GLY A 322 UNP P11938 EXPRESSION TAG SEQADV 6LDM MET A 323 UNP P11938 EXPRESSION TAG SEQADV 6LDM LYS A 324 UNP P11938 EXPRESSION TAG SEQADV 6LDM GLU A 325 UNP P11938 EXPRESSION TAG SEQADV 6LDM THR A 326 UNP P11938 EXPRESSION TAG SEQADV 6LDM ALA A 327 UNP P11938 EXPRESSION TAG SEQADV 6LDM ALA A 328 UNP P11938 EXPRESSION TAG SEQADV 6LDM ALA A 329 UNP P11938 EXPRESSION TAG SEQADV 6LDM LYS A 330 UNP P11938 EXPRESSION TAG SEQADV 6LDM PHE A 331 UNP P11938 EXPRESSION TAG SEQADV 6LDM GLU A 332 UNP P11938 EXPRESSION TAG SEQADV 6LDM ARG A 333 UNP P11938 EXPRESSION TAG SEQADV 6LDM GLN A 334 UNP P11938 EXPRESSION TAG SEQADV 6LDM HIS A 335 UNP P11938 EXPRESSION TAG SEQADV 6LDM MET A 336 UNP P11938 EXPRESSION TAG SEQADV 6LDM ASP A 337 UNP P11938 EXPRESSION TAG SEQADV 6LDM SER A 338 UNP P11938 EXPRESSION TAG SEQADV 6LDM PRO A 339 UNP P11938 EXPRESSION TAG SEQADV 6LDM ASP A 340 UNP P11938 EXPRESSION TAG SEQADV 6LDM LEU A 341 UNP P11938 EXPRESSION TAG SEQADV 6LDM GLY A 342 UNP P11938 EXPRESSION TAG SEQADV 6LDM THR A 343 UNP P11938 EXPRESSION TAG SEQADV 6LDM GLY A 344 UNP P11938 EXPRESSION TAG SEQADV 6LDM SER A 345 UNP P11938 EXPRESSION TAG SEQADV 6LDM GLU A 346 UNP P11938 EXPRESSION TAG SEQADV 6LDM ASN A 347 UNP P11938 EXPRESSION TAG SEQADV 6LDM LEU A 348 UNP P11938 EXPRESSION TAG SEQADV 6LDM TYR A 349 UNP P11938 EXPRESSION TAG SEQADV 6LDM PHE A 350 UNP P11938 EXPRESSION TAG SEQADV 6LDM GLN A 351 UNP P11938 EXPRESSION TAG SEQADV 6LDM GLY A 352 UNP P11938 EXPRESSION TAG SEQADV 6LDM A UNP P11938 GLU 570 DELETION SEQRES 1 A 291 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 A 291 GLY SER GLY MET LYS GLU THR ALA ALA ALA LYS PHE GLU SEQRES 3 A 291 ARG GLN HIS MET ASP SER PRO ASP LEU GLY THR GLY SER SEQRES 4 A 291 GLU ASN LEU TYR PHE GLN GLY GLY ALA LEU PRO SER HIS SEQRES 5 A 291 ASN LYS ALA SER PHE THR ASP GLU GLU ASP GLU PHE ILE SEQRES 6 A 291 LEU ASP VAL VAL ARG LYS ASN PRO THR ARG ARG THR THR SEQRES 7 A 291 HIS THR LEU TYR ASP GLU ILE SER HIS TYR VAL PRO ASN SEQRES 8 A 291 HIS THR GLY ASN SER ILE ARG HIS ARG PHE ARG VAL TYR SEQRES 9 A 291 LEU SER LYS ARG LEU GLU TYR VAL TYR GLU VAL ASP LYS SEQRES 10 A 291 PHE GLY LYS LEU VAL ARG ASP ASP ASP GLY ASN LEU ILE SEQRES 11 A 291 LYS THR LYS VAL LEU PRO PRO SER ILE LYS ARG LYS PHE SEQRES 12 A 291 SER ALA ASP GLU ASP TYR THR LEU ALA ILE ALA VAL LYS SEQRES 13 A 291 LYS GLN PHE TYR ARG ASP LEU PHE GLN ILE ASP PRO ASP SEQRES 14 A 291 THR GLY ARG SER LEU ILE THR ASP GLU ASP THR PRO THR SEQRES 15 A 291 ALA ILE ALA ARG ARG ASN MET THR MET ASP PRO ASN HIS SEQRES 16 A 291 VAL PRO GLY SER GLU PRO ASN PHE ALA ALA TYR ARG THR SEQRES 17 A 291 GLN SER ARG ARG GLY PRO ILE ALA ARG GLU PHE PHE LYS SEQRES 18 A 291 HIS PHE ALA GLU GLU HIS ALA ALA HIS THR GLU ASN ALA SEQRES 19 A 291 TRP ARG ASP ARG PHE ARG LYS PHE LEU LEU ALA TYR GLY SEQRES 20 A 291 ILE ASP ASP TYR ILE SER TYR TYR GLU ALA GLU LYS ALA SEQRES 21 A 291 GLN ASN ARG PRO GLU PRO MET LYS ASN LEU THR ASN ARG SEQRES 22 A 291 PRO LYS ARG PRO GLY VAL PRO THR PRO GLY ASN TYR ASN SEQRES 23 A 291 SER ALA ALA LYS ARG SEQRES 1 B 19 DT DT DG DG DG DT DG DG DG DT DG DG DG SEQRES 2 B 19 DT DG DG DG DT DT HET GOL A 601 6 HET TRS A 602 8 HET NA A 603 1 HET NA A 604 1 HET NA A 605 1 HET K B 101 1 HET K B 102 1 HET K B 103 1 HET K B 104 1 HET K B 105 1 HET NA B 106 1 HET NA B 107 1 HET NA B 108 1 HET NA B 109 1 HET NA B 110 1 HET NA B 111 1 HET NA B 112 1 HET NA B 113 1 HETNAM GOL GLYCEROL HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM NA SODIUM ION HETNAM K POTASSIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN TRS TRIS BUFFER FORMUL 3 GOL C3 H8 O3 FORMUL 4 TRS C4 H12 N O3 1+ FORMUL 5 NA 11(NA 1+) FORMUL 8 K 5(K 1+) FORMUL 21 HOH *43(H2 O) HELIX 1 AA1 THR A 364 LYS A 377 1 14 HELIX 2 AA2 ASN A 378 ARG A 382 5 5 HELIX 3 AA3 HIS A 385 HIS A 393 1 9 HELIX 4 AA4 THR A 399 TYR A 410 1 12 HELIX 5 AA5 LEU A 411 LEU A 415 5 5 HELIX 6 AA6 SER A 450 GLN A 471 1 22 HELIX 7 AA7 ALA A 522 HIS A 533 1 12 HELIX 8 AA8 THR A 537 PHE A 548 1 12 HELIX 9 AA9 PHE A 548 GLY A 553 1 6 HELIX 10 AB1 GLY A 553 ALA A 566 1 14 SHEET 1 AA1 2 VAL A 418 TYR A 419 0 SHEET 2 AA1 2 LYS A 437 THR A 438 -1 O THR A 438 N VAL A 418 LINK O ALA A 361 NA NA A 605 1555 1555 3.02 LINK OD1 ASN A 401 NA NA A 604 1555 1555 2.49 LINK NA NA A 605 O HOH B 213 1555 1555 2.63 LINK O HOH A 706 NA NA B 113 1555 1555 2.92 LINK O6 DG B 3 K K B 102 1555 1555 2.78 LINK O6 DG B 3 K K B 103 1555 1555 2.56 LINK O6 DG B 3 K K B 103 1555 2555 2.56 LINK OP2 DG B 3 K K B 104 1555 1555 2.15 LINK O5' DG B 3 K K B 104 1555 1555 2.66 LINK O6 DG B 4 K K B 101 1555 1555 2.94 LINK O6 DG B 4 K K B 102 1555 1555 2.71 LINK O6 DG B 5 K K B 101 1555 1555 2.68 LINK O4' DG B 5 NA NA B 108 1555 1555 2.73 LINK O6 DG B 7 K K B 102 1555 1555 2.82 LINK O6 DG B 7 K K B 103 1555 1555 2.76 LINK O6 DG B 7 K K B 103 1555 2555 2.76 LINK OP1 DG B 7 NA NA B 108 1555 1555 2.67 LINK O6 DG B 8 K K B 101 1555 1555 2.85 LINK O6 DG B 8 K K B 102 1555 1555 2.70 LINK OP2 DG B 8 NA NA B 110 1555 1555 2.23 LINK O6 DG B 9 K K B 101 1555 1555 2.65 LINK O6 DG B 11 K K B 102 1555 1555 2.99 LINK O6 DG B 11 K K B 103 1555 1555 2.96 LINK O6 DG B 11 K K B 103 1555 2555 2.96 LINK OP1 DG B 11 NA NA B 111 1555 1555 2.67 LINK O6 DG B 12 K K B 101 1555 1555 2.77 LINK O6 DG B 12 K K B 102 1555 1555 2.78 LINK O6 DG B 13 K K B 101 1555 1555 2.79 LINK O6 DG B 15 K K B 102 1555 1555 2.82 LINK O6 DG B 15 K K B 103 1555 1555 2.83 LINK O6 DG B 15 K K B 103 1555 2555 2.83 LINK O6 DG B 16 K K B 101 1555 1555 2.96 LINK O6 DG B 16 K K B 102 1555 1555 2.86 LINK O6 DG B 17 K K B 101 1555 1555 2.65 LINK O6 DG B 17 NA NA B 109 1555 1555 3.01 LINK O3' DT B 18 K K B 105 1555 1555 2.12 LINK NA NA B 106 O HOH B 201 1555 1555 2.39 LINK NA NA B 107 O HOH B 202 1555 1555 2.69 LINK NA NA B 107 O HOH B 207 1555 1555 2.41 LINK NA NA B 109 O HOH B 209 1555 1555 3.15 LINK NA NA B 111 O HOH B 210 1555 1555 3.13 LINK NA NA B 113 O HOH B 208 1555 1555 3.03 SITE 1 AC1 2 PHE A 548 MET A 573 SITE 1 AC2 6 THR A 384 HIS A 385 THR A 386 ARG A 447 SITE 2 AC2 6 THR A 537 ALA A 540 SITE 1 AC3 6 HIS A 405 ARG A 408 VAL A 409 DG B 13 SITE 2 AC3 6 DT B 18 NA B 109 SITE 1 AC4 3 ASN A 401 ARG A 404 HIS A 405 SITE 1 AC5 5 ALA A 361 PHE A 363 DG B 12 DG B 13 SITE 2 AC5 5 HOH B 213 SITE 1 AC6 9 DG B 4 DG B 5 DG B 8 DG B 9 SITE 2 AC6 9 DG B 12 DG B 13 DG B 16 DG B 17 SITE 3 AC6 9 K B 102 SITE 1 AC7 10 DG B 3 DG B 4 DG B 7 DG B 8 SITE 2 AC7 10 DG B 11 DG B 12 DG B 15 DG B 16 SITE 3 AC7 10 K B 101 K B 103 SITE 1 AC8 5 DG B 3 DG B 7 DG B 11 DG B 15 SITE 2 AC8 5 K B 102 SITE 1 AC9 2 DT B 2 DG B 3 SITE 1 AD1 1 DT B 18 SITE 1 AD2 5 DG B 8 DG B 9 DG B 11 DG B 12 SITE 2 AD2 5 HOH B 201 SITE 1 AD3 3 DG B 3 HOH B 202 HOH B 207 SITE 1 AD4 4 DG B 4 DG B 5 DT B 6 DG B 7 SITE 1 AD5 6 VAL A 409 NA A 603 DG B 5 DG B 13 SITE 2 AD5 6 DG B 17 DT B 18 SITE 1 AD6 3 DT B 6 DG B 7 DG B 8 SITE 1 AD7 3 DG B 7 DG B 8 DG B 11 SITE 1 AD8 3 DT B 2 DG B 15 DG B 16 SITE 1 AD9 3 HOH A 706 DG B 13 HOH B 208 CRYST1 84.680 70.200 64.850 90.00 97.72 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011809 0.000000 0.001601 0.00000 SCALE2 0.000000 0.014245 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015561 0.00000