data_6LF2 # _entry.id 6LF2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6LF2 pdb_00006lf2 10.2210/pdb6lf2/pdb WWPDB D_1300014670 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6LF2 _pdbx_database_status.recvd_initial_deposition_date 2019-11-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kamata, K.' 1 0000-0003-4344-8473 'Ozeki, Y.' 2 ? 'Park, S.-Y.' 3 0000-0001-6164-8896 'Tame, J.R.H.' 4 0000-0002-9341-7280 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2045-2322 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 10 _citation.language ? _citation.page_first 22102 _citation.page_last 22102 _citation.title 'The structure of SeviL, a GM1b/asialo-GM1 binding R-type lectin from the mussel Mytilisepta virgata.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41598-020-78926-7 _citation.pdbx_database_id_PubMed 33328520 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kamata, K.' 1 ? primary 'Mizutani, K.' 2 ? primary 'Takahashi, K.' 3 ? primary 'Marchetti, R.' 4 ? primary 'Silipo, A.' 5 ? primary 'Addy, C.' 6 ? primary 'Park, S.Y.' 7 ? primary 'Fujii, Y.' 8 ? primary 'Fujita, H.' 9 ? primary 'Konuma, T.' 10 ? primary 'Ikegami, T.' 11 ? primary 'Ozeki, Y.' 12 ? primary 'Tame, J.R.H.' 13 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6LF2 _cell.details ? _cell.formula_units_Z ? _cell.length_a 61.590 _cell.length_a_esd ? _cell.length_b 61.590 _cell.length_b_esd ? _cell.length_c 136.783 _cell.length_c_esd ? _cell.volume 518862.798 _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LF2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man SeviL 15347.116 2 ? ? ? ? 2 branched man 'beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose' 707.630 2 ? ? ? ? 3 water nat water 18.015 137 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMSSVTIGKCYIQNRENGGRAFYNLGRKDLGIFTGKMYDDQIWSFQKSDTPGYYTIGRESKFLQYNGEQVIMSDIEQD TTLWSLEEVPEDKGFYRLLNKVHKAYLDYNGGDLVANKHQTESEKWILFKAY ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMSSVTIGKCYIQNRENGGRAFYNLGRKDLGIFTGKMYDDQIWSFQKSDTPGYYTIGRESKFLQYNGEQVIMSDIEQD TTLWSLEEVPEDKGFYRLLNKVHKAYLDYNGGDLVANKHQTESEKWILFKAY ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 SER n 1 6 SER n 1 7 VAL n 1 8 THR n 1 9 ILE n 1 10 GLY n 1 11 LYS n 1 12 CYS n 1 13 TYR n 1 14 ILE n 1 15 GLN n 1 16 ASN n 1 17 ARG n 1 18 GLU n 1 19 ASN n 1 20 GLY n 1 21 GLY n 1 22 ARG n 1 23 ALA n 1 24 PHE n 1 25 TYR n 1 26 ASN n 1 27 LEU n 1 28 GLY n 1 29 ARG n 1 30 LYS n 1 31 ASP n 1 32 LEU n 1 33 GLY n 1 34 ILE n 1 35 PHE n 1 36 THR n 1 37 GLY n 1 38 LYS n 1 39 MET n 1 40 TYR n 1 41 ASP n 1 42 ASP n 1 43 GLN n 1 44 ILE n 1 45 TRP n 1 46 SER n 1 47 PHE n 1 48 GLN n 1 49 LYS n 1 50 SER n 1 51 ASP n 1 52 THR n 1 53 PRO n 1 54 GLY n 1 55 TYR n 1 56 TYR n 1 57 THR n 1 58 ILE n 1 59 GLY n 1 60 ARG n 1 61 GLU n 1 62 SER n 1 63 LYS n 1 64 PHE n 1 65 LEU n 1 66 GLN n 1 67 TYR n 1 68 ASN n 1 69 GLY n 1 70 GLU n 1 71 GLN n 1 72 VAL n 1 73 ILE n 1 74 MET n 1 75 SER n 1 76 ASP n 1 77 ILE n 1 78 GLU n 1 79 GLN n 1 80 ASP n 1 81 THR n 1 82 THR n 1 83 LEU n 1 84 TRP n 1 85 SER n 1 86 LEU n 1 87 GLU n 1 88 GLU n 1 89 VAL n 1 90 PRO n 1 91 GLU n 1 92 ASP n 1 93 LYS n 1 94 GLY n 1 95 PHE n 1 96 TYR n 1 97 ARG n 1 98 LEU n 1 99 LEU n 1 100 ASN n 1 101 LYS n 1 102 VAL n 1 103 HIS n 1 104 LYS n 1 105 ALA n 1 106 TYR n 1 107 LEU n 1 108 ASP n 1 109 TYR n 1 110 ASN n 1 111 GLY n 1 112 GLY n 1 113 ASP n 1 114 LEU n 1 115 VAL n 1 116 ALA n 1 117 ASN n 1 118 LYS n 1 119 HIS n 1 120 GLN n 1 121 THR n 1 122 GLU n 1 123 SER n 1 124 GLU n 1 125 LYS n 1 126 TRP n 1 127 ILE n 1 128 LEU n 1 129 PHE n 1 130 LYS n 1 131 ALA n 1 132 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 132 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Septifer virgatus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 182745 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6LF2 _struct_ref.pdbx_db_accession 6LF2 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6LF2 A 1 ? 132 ? 6LF2 -2 ? 129 ? -2 129 2 1 6LF2 B 1 ? 132 ? 6LF2 -2 ? 129 ? -2 129 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BGC 'D-saccharide, beta linking' . beta-D-glucopyranose 'beta-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NGA 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-galactopyranose ;N-acetyl-beta-D-galactosamine; 2-acetamido-2-deoxy-beta-D-galactose; 2-acetamido-2-deoxy-D-galactose; 2-acetamido-2-deoxy-galactose; N-ACETYL-D-GALACTOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6LF2 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.79 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M MIB (sodium malonate dibasic monohydrate, imidazole, boric acid), pH 5.0, 25% PEG 1500' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-02-27 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-17A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.98 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL-17A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate 13.03 _reflns.entry_id 6LF2 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.6 _reflns.d_resolution_low 43.6 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 725030 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 20.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 25.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.05 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.6 _reflns_shell.d_res_low 1.627 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1780 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.426 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 15.22 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6LF2 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.60 _refine.ls_d_res_low 34.20 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 35582 _refine.ls_number_reflns_R_free 1806 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.66 _refine.ls_percent_reflns_R_free 5.08 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1965 _refine.ls_R_factor_R_free 0.2284 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1948 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.39 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6LF1 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 20.4243 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1764 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 34.20 _refine_hist.number_atoms_solvent 137 _refine_hist.number_atoms_total 2348 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2115 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 96 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0055 ? 2272 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.8015 ? 3066 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0587 ? 334 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0044 ? 381 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 15.5836 ? 862 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.60 1.64 . . 133 2510 97.96 . . . 0.3089 . 0.2440 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.64 1.69 . . 146 2514 99.33 . . . 0.2788 . 0.2172 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.69 1.75 . . 141 2550 99.30 . . . 0.2212 . 0.2052 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.75 1.81 . . 133 2560 99.74 . . . 0.2300 . 0.1985 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.81 1.88 . . 141 2536 99.59 . . . 0.2263 . 0.1972 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.88 1.97 . . 123 2580 99.74 . . . 0.2439 . 0.1972 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.97 2.07 . . 144 2577 99.93 . . . 0.2454 . 0.1916 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.07 2.20 . . 128 2604 99.93 . . . 0.2662 . 0.2027 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.20 2.37 . . 137 2594 100.00 . . . 0.2303 . 0.2008 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.37 2.61 . . 136 2608 99.96 . . . 0.2236 . 0.2070 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.61 2.98 . . 143 2633 100.00 . . . 0.2476 . 0.2004 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.98 3.76 . . 138 2679 100.00 . . . 0.2399 . 0.1826 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.76 34.20 . . 163 2831 99.97 . . . 0.1737 . 0.1763 . . . . . . . . . . . # _struct.entry_id 6LF2 _struct.title 'SeviL bound to asialo-GM1 saccharide' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6LF2 _struct_keywords.text 'trefoil, anti-cancer, apoptosis, mussel, SUGAR BINDING PROTEIN' _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 TYR A 40 ? ILE A 44 ? TYR A 37 ILE A 41 5 ? 5 HELX_P HELX_P2 AA2 GLN A 79 ? THR A 82 ? GLN A 76 THR A 79 5 ? 4 HELX_P HELX_P3 AA3 THR A 121 ? GLU A 124 ? THR A 118 GLU A 121 5 ? 4 HELX_P HELX_P4 AA4 TYR B 40 ? ILE B 44 ? TYR B 37 ILE B 41 5 ? 5 HELX_P HELX_P5 AA5 GLN B 79 ? THR B 82 ? GLN B 76 THR B 79 5 ? 4 HELX_P HELX_P6 AA6 THR B 121 ? GLU B 124 ? THR B 118 GLU B 121 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C BGC . O4 ? ? ? 1_555 C GAL . C1 ? ? C BGC 1 C GAL 2 1_555 ? ? ? ? ? ? ? 1.431 ? ? covale2 covale both ? C GAL . O4 ? ? ? 1_555 C NGA . C1 ? ? C GAL 2 C NGA 3 1_555 ? ? ? ? ? ? ? 1.441 ? ? covale3 covale both ? C NGA . O3 ? ? ? 1_555 C GAL . C1 ? ? C NGA 3 C GAL 4 1_555 ? ? ? ? ? ? ? 1.429 ? ? covale4 covale both ? D BGC . O4 ? ? ? 1_555 D GAL . C1 ? ? D BGC 1 D GAL 2 1_555 ? ? ? ? ? ? ? 1.443 ? ? covale5 covale both ? D GAL . O4 ? ? ? 1_555 D NGA . C1 ? ? D GAL 2 D NGA 3 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale6 covale both ? D NGA . O3 ? ? ? 1_555 D GAL . C1 ? ? D NGA 3 D GAL 4 1_555 ? ? ? ? ? ? ? 1.436 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 2 ? AA5 ? 6 ? AA6 ? 2 ? AA7 ? 2 ? AA8 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA5 5 6 ? anti-parallel AA6 1 2 ? anti-parallel AA7 1 2 ? anti-parallel AA8 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 72 ? SER A 75 ? VAL A 69 SER A 72 AA1 2 LYS A 63 ? TYR A 67 ? LYS A 60 TYR A 64 AA1 3 TYR A 56 ? ARG A 60 ? TYR A 53 ARG A 57 AA1 4 TRP A 45 ? LYS A 49 ? TRP A 42 LYS A 46 AA1 5 GLY A 10 ? ASN A 16 ? GLY A 7 ASN A 13 AA1 6 TRP A 126 ? LYS A 130 ? TRP A 123 LYS A 127 AA2 1 ARG A 22 ? ASN A 26 ? ARG A 19 ASN A 23 AA2 2 ASP A 31 ? PHE A 35 ? ASP A 28 PHE A 32 AA3 1 TRP A 84 ? GLU A 88 ? TRP A 81 GLU A 85 AA3 2 TYR A 96 ? ASN A 100 ? TYR A 93 ASN A 97 AA4 1 TYR A 106 ? ASN A 110 ? TYR A 103 ASN A 107 AA4 2 ASP A 113 ? ASN A 117 ? ASP A 110 ASN A 114 AA5 1 VAL B 72 ? SER B 75 ? VAL B 69 SER B 72 AA5 2 LYS B 63 ? TYR B 67 ? LYS B 60 TYR B 64 AA5 3 TYR B 56 ? ARG B 60 ? TYR B 53 ARG B 57 AA5 4 TRP B 45 ? SER B 50 ? TRP B 42 SER B 47 AA5 5 SER B 6 ? ASN B 16 ? SER B 3 ASN B 13 AA5 6 TRP B 126 ? LYS B 130 ? TRP B 123 LYS B 127 AA6 1 ARG B 22 ? ASN B 26 ? ARG B 19 ASN B 23 AA6 2 ASP B 31 ? PHE B 35 ? ASP B 28 PHE B 32 AA7 1 TRP B 84 ? GLU B 88 ? TRP B 81 GLU B 85 AA7 2 TYR B 96 ? ASN B 100 ? TYR B 93 ASN B 97 AA8 1 TYR B 106 ? ASN B 110 ? TYR B 103 ASN B 107 AA8 2 ASP B 113 ? ASN B 117 ? ASP B 110 ASN B 114 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ILE A 73 ? O ILE A 70 N GLN A 66 ? N GLN A 63 AA1 2 3 O LEU A 65 ? O LEU A 62 N ILE A 58 ? N ILE A 55 AA1 3 4 O GLY A 59 ? O GLY A 56 N SER A 46 ? N SER A 43 AA1 4 5 O TRP A 45 ? O TRP A 42 N CYS A 12 ? N CYS A 9 AA1 5 6 N GLN A 15 ? N GLN A 12 O ILE A 127 ? O ILE A 124 AA2 1 2 N ASN A 26 ? N ASN A 23 O ASP A 31 ? O ASP A 28 AA3 1 2 N GLU A 87 ? N GLU A 84 O ARG A 97 ? O ARG A 94 AA4 1 2 N ASP A 108 ? N ASP A 105 O VAL A 115 ? O VAL A 112 AA5 1 2 O SER B 75 ? O SER B 72 N PHE B 64 ? N PHE B 61 AA5 2 3 O LEU B 65 ? O LEU B 62 N ILE B 58 ? N ILE B 55 AA5 3 4 O GLY B 59 ? O GLY B 56 N SER B 46 ? N SER B 43 AA5 4 5 O PHE B 47 ? O PHE B 44 N ILE B 9 ? N ILE B 6 AA5 5 6 N GLN B 15 ? N GLN B 12 O ILE B 127 ? O ILE B 124 AA6 1 2 N ARG B 22 ? N ARG B 19 O PHE B 35 ? O PHE B 32 AA7 1 2 N GLU B 87 ? N GLU B 84 O ARG B 97 ? O ARG B 94 AA8 1 2 N TYR B 106 ? N TYR B 103 O ASN B 117 ? O ASN B 114 # _atom_sites.entry_id 6LF2 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.016236 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016236 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007311 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 SER 2 -1 ? ? ? A . n A 1 3 HIS 3 0 ? ? ? A . n A 1 4 MET 4 1 ? ? ? A . n A 1 5 SER 5 2 ? ? ? A . n A 1 6 SER 6 3 ? ? ? A . n A 1 7 VAL 7 4 ? ? ? A . n A 1 8 THR 8 5 5 THR THR A . n A 1 9 ILE 9 6 6 ILE ILE A . n A 1 10 GLY 10 7 7 GLY GLY A . n A 1 11 LYS 11 8 8 LYS LYS A . n A 1 12 CYS 12 9 9 CYS CYS A . n A 1 13 TYR 13 10 10 TYR TYR A . n A 1 14 ILE 14 11 11 ILE ILE A . n A 1 15 GLN 15 12 12 GLN GLN A . n A 1 16 ASN 16 13 13 ASN ASN A . n A 1 17 ARG 17 14 14 ARG ARG A . n A 1 18 GLU 18 15 15 GLU GLU A . n A 1 19 ASN 19 16 16 ASN ASN A . n A 1 20 GLY 20 17 17 GLY GLY A . n A 1 21 GLY 21 18 18 GLY GLY A . n A 1 22 ARG 22 19 19 ARG ARG A . n A 1 23 ALA 23 20 20 ALA ALA A . n A 1 24 PHE 24 21 21 PHE PHE A . n A 1 25 TYR 25 22 22 TYR TYR A . n A 1 26 ASN 26 23 23 ASN ASN A . n A 1 27 LEU 27 24 24 LEU LEU A . n A 1 28 GLY 28 25 25 GLY GLY A . n A 1 29 ARG 29 26 26 ARG ARG A . n A 1 30 LYS 30 27 27 LYS LYS A . n A 1 31 ASP 31 28 28 ASP ASP A . n A 1 32 LEU 32 29 29 LEU LEU A . n A 1 33 GLY 33 30 30 GLY GLY A . n A 1 34 ILE 34 31 31 ILE ILE A . n A 1 35 PHE 35 32 32 PHE PHE A . n A 1 36 THR 36 33 33 THR THR A . n A 1 37 GLY 37 34 34 GLY GLY A . n A 1 38 LYS 38 35 35 LYS LYS A . n A 1 39 MET 39 36 36 MET MET A . n A 1 40 TYR 40 37 37 TYR TYR A . n A 1 41 ASP 41 38 38 ASP ASP A . n A 1 42 ASP 42 39 39 ASP ASP A . n A 1 43 GLN 43 40 40 GLN GLN A . n A 1 44 ILE 44 41 41 ILE ILE A . n A 1 45 TRP 45 42 42 TRP TRP A . n A 1 46 SER 46 43 43 SER SER A . n A 1 47 PHE 47 44 44 PHE PHE A . n A 1 48 GLN 48 45 45 GLN GLN A . n A 1 49 LYS 49 46 46 LYS LYS A . n A 1 50 SER 50 47 47 SER SER A . n A 1 51 ASP 51 48 48 ASP ASP A . n A 1 52 THR 52 49 49 THR THR A . n A 1 53 PRO 53 50 50 PRO PRO A . n A 1 54 GLY 54 51 51 GLY GLY A . n A 1 55 TYR 55 52 52 TYR TYR A . n A 1 56 TYR 56 53 53 TYR TYR A . n A 1 57 THR 57 54 54 THR THR A . n A 1 58 ILE 58 55 55 ILE ILE A . n A 1 59 GLY 59 56 56 GLY GLY A . n A 1 60 ARG 60 57 57 ARG ARG A . n A 1 61 GLU 61 58 58 GLU GLU A . n A 1 62 SER 62 59 59 SER SER A . n A 1 63 LYS 63 60 60 LYS LYS A . n A 1 64 PHE 64 61 61 PHE PHE A . n A 1 65 LEU 65 62 62 LEU LEU A . n A 1 66 GLN 66 63 63 GLN GLN A . n A 1 67 TYR 67 64 64 TYR TYR A . n A 1 68 ASN 68 65 65 ASN ASN A . n A 1 69 GLY 69 66 66 GLY GLY A . n A 1 70 GLU 70 67 67 GLU GLU A . n A 1 71 GLN 71 68 68 GLN GLN A . n A 1 72 VAL 72 69 69 VAL VAL A . n A 1 73 ILE 73 70 70 ILE ILE A . n A 1 74 MET 74 71 71 MET MET A . n A 1 75 SER 75 72 72 SER SER A . n A 1 76 ASP 76 73 73 ASP ASP A . n A 1 77 ILE 77 74 74 ILE ILE A . n A 1 78 GLU 78 75 75 GLU GLU A . n A 1 79 GLN 79 76 76 GLN GLN A . n A 1 80 ASP 80 77 77 ASP ASP A . n A 1 81 THR 81 78 78 THR THR A . n A 1 82 THR 82 79 79 THR THR A . n A 1 83 LEU 83 80 80 LEU LEU A . n A 1 84 TRP 84 81 81 TRP TRP A . n A 1 85 SER 85 82 82 SER SER A . n A 1 86 LEU 86 83 83 LEU LEU A . n A 1 87 GLU 87 84 84 GLU GLU A . n A 1 88 GLU 88 85 85 GLU GLU A . n A 1 89 VAL 89 86 86 VAL VAL A . n A 1 90 PRO 90 87 87 PRO PRO A . n A 1 91 GLU 91 88 88 GLU GLU A . n A 1 92 ASP 92 89 89 ASP ASP A . n A 1 93 LYS 93 90 90 LYS LYS A . n A 1 94 GLY 94 91 91 GLY GLY A . n A 1 95 PHE 95 92 92 PHE PHE A . n A 1 96 TYR 96 93 93 TYR TYR A . n A 1 97 ARG 97 94 94 ARG ARG A . n A 1 98 LEU 98 95 95 LEU LEU A . n A 1 99 LEU 99 96 96 LEU LEU A . n A 1 100 ASN 100 97 97 ASN ASN A . n A 1 101 LYS 101 98 98 LYS LYS A . n A 1 102 VAL 102 99 99 VAL VAL A . n A 1 103 HIS 103 100 100 HIS HIS A . n A 1 104 LYS 104 101 101 LYS LYS A . n A 1 105 ALA 105 102 102 ALA ALA A . n A 1 106 TYR 106 103 103 TYR TYR A . n A 1 107 LEU 107 104 104 LEU LEU A . n A 1 108 ASP 108 105 105 ASP ASP A . n A 1 109 TYR 109 106 106 TYR TYR A . n A 1 110 ASN 110 107 107 ASN ASN A . n A 1 111 GLY 111 108 108 GLY GLY A . n A 1 112 GLY 112 109 109 GLY GLY A . n A 1 113 ASP 113 110 110 ASP ASP A . n A 1 114 LEU 114 111 111 LEU LEU A . n A 1 115 VAL 115 112 112 VAL VAL A . n A 1 116 ALA 116 113 113 ALA ALA A . n A 1 117 ASN 117 114 114 ASN ASN A . n A 1 118 LYS 118 115 115 LYS LYS A . n A 1 119 HIS 119 116 116 HIS HIS A . n A 1 120 GLN 120 117 117 GLN GLN A . n A 1 121 THR 121 118 118 THR THR A . n A 1 122 GLU 122 119 119 GLU GLU A . n A 1 123 SER 123 120 120 SER SER A . n A 1 124 GLU 124 121 121 GLU GLU A . n A 1 125 LYS 125 122 122 LYS LYS A . n A 1 126 TRP 126 123 123 TRP TRP A . n A 1 127 ILE 127 124 124 ILE ILE A . n A 1 128 LEU 128 125 125 LEU LEU A . n A 1 129 PHE 129 126 126 PHE PHE A . n A 1 130 LYS 130 127 127 LYS LYS A . n A 1 131 ALA 131 128 128 ALA ALA A . n A 1 132 TYR 132 129 129 TYR TYR A . n B 1 1 GLY 1 -2 ? ? ? B . n B 1 2 SER 2 -1 -1 SER SER B . n B 1 3 HIS 3 0 0 HIS HIS B . n B 1 4 MET 4 1 1 MET MET B . n B 1 5 SER 5 2 2 SER SER B . n B 1 6 SER 6 3 3 SER SER B . n B 1 7 VAL 7 4 4 VAL VAL B . n B 1 8 THR 8 5 5 THR THR B . n B 1 9 ILE 9 6 6 ILE ILE B . n B 1 10 GLY 10 7 7 GLY GLY B . n B 1 11 LYS 11 8 8 LYS LYS B . n B 1 12 CYS 12 9 9 CYS CYS B . n B 1 13 TYR 13 10 10 TYR TYR B . n B 1 14 ILE 14 11 11 ILE ILE B . n B 1 15 GLN 15 12 12 GLN GLN B . n B 1 16 ASN 16 13 13 ASN ASN B . n B 1 17 ARG 17 14 14 ARG ARG B . n B 1 18 GLU 18 15 15 GLU GLU B . n B 1 19 ASN 19 16 16 ASN ASN B . n B 1 20 GLY 20 17 17 GLY GLY B . n B 1 21 GLY 21 18 18 GLY GLY B . n B 1 22 ARG 22 19 19 ARG ARG B . n B 1 23 ALA 23 20 20 ALA ALA B . n B 1 24 PHE 24 21 21 PHE PHE B . n B 1 25 TYR 25 22 22 TYR TYR B . n B 1 26 ASN 26 23 23 ASN ASN B . n B 1 27 LEU 27 24 24 LEU LEU B . n B 1 28 GLY 28 25 25 GLY GLY B . n B 1 29 ARG 29 26 26 ARG ARG B . n B 1 30 LYS 30 27 27 LYS LYS B . n B 1 31 ASP 31 28 28 ASP ASP B . n B 1 32 LEU 32 29 29 LEU LEU B . n B 1 33 GLY 33 30 30 GLY GLY B . n B 1 34 ILE 34 31 31 ILE ILE B . n B 1 35 PHE 35 32 32 PHE PHE B . n B 1 36 THR 36 33 33 THR THR B . n B 1 37 GLY 37 34 34 GLY GLY B . n B 1 38 LYS 38 35 35 LYS LYS B . n B 1 39 MET 39 36 36 MET MET B . n B 1 40 TYR 40 37 37 TYR TYR B . n B 1 41 ASP 41 38 38 ASP ASP B . n B 1 42 ASP 42 39 39 ASP ASP B . n B 1 43 GLN 43 40 40 GLN GLN B . n B 1 44 ILE 44 41 41 ILE ILE B . n B 1 45 TRP 45 42 42 TRP TRP B . n B 1 46 SER 46 43 43 SER SER B . n B 1 47 PHE 47 44 44 PHE PHE B . n B 1 48 GLN 48 45 45 GLN GLN B . n B 1 49 LYS 49 46 46 LYS LYS B . n B 1 50 SER 50 47 47 SER SER B . n B 1 51 ASP 51 48 48 ASP ASP B . n B 1 52 THR 52 49 49 THR THR B . n B 1 53 PRO 53 50 50 PRO PRO B . n B 1 54 GLY 54 51 51 GLY GLY B . n B 1 55 TYR 55 52 52 TYR TYR B . n B 1 56 TYR 56 53 53 TYR TYR B . n B 1 57 THR 57 54 54 THR THR B . n B 1 58 ILE 58 55 55 ILE ILE B . n B 1 59 GLY 59 56 56 GLY GLY B . n B 1 60 ARG 60 57 57 ARG ARG B . n B 1 61 GLU 61 58 58 GLU GLU B . n B 1 62 SER 62 59 59 SER SER B . n B 1 63 LYS 63 60 60 LYS LYS B . n B 1 64 PHE 64 61 61 PHE PHE B . n B 1 65 LEU 65 62 62 LEU LEU B . n B 1 66 GLN 66 63 63 GLN GLN B . n B 1 67 TYR 67 64 64 TYR TYR B . n B 1 68 ASN 68 65 65 ASN ASN B . n B 1 69 GLY 69 66 66 GLY GLY B . n B 1 70 GLU 70 67 67 GLU GLU B . n B 1 71 GLN 71 68 68 GLN GLN B . n B 1 72 VAL 72 69 69 VAL VAL B . n B 1 73 ILE 73 70 70 ILE ILE B . n B 1 74 MET 74 71 71 MET MET B . n B 1 75 SER 75 72 72 SER SER B . n B 1 76 ASP 76 73 73 ASP ASP B . n B 1 77 ILE 77 74 74 ILE ILE B . n B 1 78 GLU 78 75 75 GLU GLU B . n B 1 79 GLN 79 76 76 GLN GLN B . n B 1 80 ASP 80 77 77 ASP ASP B . n B 1 81 THR 81 78 78 THR THR B . n B 1 82 THR 82 79 79 THR THR B . n B 1 83 LEU 83 80 80 LEU LEU B . n B 1 84 TRP 84 81 81 TRP TRP B . n B 1 85 SER 85 82 82 SER SER B . n B 1 86 LEU 86 83 83 LEU LEU B . n B 1 87 GLU 87 84 84 GLU GLU B . n B 1 88 GLU 88 85 85 GLU GLU B . n B 1 89 VAL 89 86 86 VAL VAL B . n B 1 90 PRO 90 87 87 PRO PRO B . n B 1 91 GLU 91 88 88 GLU GLU B . n B 1 92 ASP 92 89 89 ASP ASP B . n B 1 93 LYS 93 90 90 LYS LYS B . n B 1 94 GLY 94 91 91 GLY GLY B . n B 1 95 PHE 95 92 92 PHE PHE B . n B 1 96 TYR 96 93 93 TYR TYR B . n B 1 97 ARG 97 94 94 ARG ARG B . n B 1 98 LEU 98 95 95 LEU LEU B . n B 1 99 LEU 99 96 96 LEU LEU B . n B 1 100 ASN 100 97 97 ASN ASN B . n B 1 101 LYS 101 98 98 LYS LYS B . n B 1 102 VAL 102 99 99 VAL VAL B . n B 1 103 HIS 103 100 100 HIS HIS B . n B 1 104 LYS 104 101 101 LYS LYS B . n B 1 105 ALA 105 102 102 ALA ALA B . n B 1 106 TYR 106 103 103 TYR TYR B . n B 1 107 LEU 107 104 104 LEU LEU B . n B 1 108 ASP 108 105 105 ASP ASP B . n B 1 109 TYR 109 106 106 TYR TYR B . n B 1 110 ASN 110 107 107 ASN ASN B . n B 1 111 GLY 111 108 108 GLY GLY B . n B 1 112 GLY 112 109 109 GLY GLY B . n B 1 113 ASP 113 110 110 ASP ASP B . n B 1 114 LEU 114 111 111 LEU LEU B . n B 1 115 VAL 115 112 112 VAL VAL B . n B 1 116 ALA 116 113 113 ALA ALA B . n B 1 117 ASN 117 114 114 ASN ASN B . n B 1 118 LYS 118 115 115 LYS LYS B . n B 1 119 HIS 119 116 116 HIS HIS B . n B 1 120 GLN 120 117 117 GLN GLN B . n B 1 121 THR 121 118 118 THR THR B . n B 1 122 GLU 122 119 119 GLU GLU B . n B 1 123 SER 123 120 120 SER SER B . n B 1 124 GLU 124 121 121 GLU GLU B . n B 1 125 LYS 125 122 122 LYS LYS B . n B 1 126 TRP 126 123 123 TRP TRP B . n B 1 127 ILE 127 124 124 ILE ILE B . n B 1 128 LEU 128 125 125 LEU LEU B . n B 1 129 PHE 129 126 126 PHE PHE B . n B 1 130 LYS 130 127 127 LYS LYS B . n B 1 131 ALA 131 128 128 ALA ALA B . n B 1 132 TYR 132 129 129 TYR TYR B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 301 32 HOH HOH A . E 3 HOH 2 302 133 HOH HOH A . E 3 HOH 3 303 126 HOH HOH A . E 3 HOH 4 304 112 HOH HOH A . E 3 HOH 5 305 41 HOH HOH A . E 3 HOH 6 306 7 HOH HOH A . E 3 HOH 7 307 121 HOH HOH A . E 3 HOH 8 308 127 HOH HOH A . E 3 HOH 9 309 109 HOH HOH A . E 3 HOH 10 310 20 HOH HOH A . E 3 HOH 11 311 11 HOH HOH A . E 3 HOH 12 312 61 HOH HOH A . E 3 HOH 13 313 142 HOH HOH A . E 3 HOH 14 314 49 HOH HOH A . E 3 HOH 15 315 48 HOH HOH A . E 3 HOH 16 316 9 HOH HOH A . E 3 HOH 17 317 123 HOH HOH A . E 3 HOH 18 318 59 HOH HOH A . E 3 HOH 19 319 34 HOH HOH A . E 3 HOH 20 320 52 HOH HOH A . E 3 HOH 21 321 95 HOH HOH A . E 3 HOH 22 322 64 HOH HOH A . E 3 HOH 23 323 5 HOH HOH A . E 3 HOH 24 324 114 HOH HOH A . E 3 HOH 25 325 88 HOH HOH A . E 3 HOH 26 326 105 HOH HOH A . E 3 HOH 27 327 27 HOH HOH A . E 3 HOH 28 328 137 HOH HOH A . E 3 HOH 29 329 134 HOH HOH A . E 3 HOH 30 330 53 HOH HOH A . E 3 HOH 31 331 116 HOH HOH A . E 3 HOH 32 332 46 HOH HOH A . E 3 HOH 33 333 73 HOH HOH A . E 3 HOH 34 334 117 HOH HOH A . E 3 HOH 35 335 44 HOH HOH A . E 3 HOH 36 336 138 HOH HOH A . E 3 HOH 37 337 143 HOH HOH A . E 3 HOH 38 338 22 HOH HOH A . E 3 HOH 39 339 16 HOH HOH A . E 3 HOH 40 340 104 HOH HOH A . E 3 HOH 41 341 92 HOH HOH A . E 3 HOH 42 342 68 HOH HOH A . E 3 HOH 43 343 2 HOH HOH A . E 3 HOH 44 344 13 HOH HOH A . E 3 HOH 45 345 31 HOH HOH A . E 3 HOH 46 346 79 HOH HOH A . E 3 HOH 47 347 67 HOH HOH A . E 3 HOH 48 348 97 HOH HOH A . E 3 HOH 49 349 94 HOH HOH A . E 3 HOH 50 350 54 HOH HOH A . E 3 HOH 51 351 37 HOH HOH A . E 3 HOH 52 352 85 HOH HOH A . E 3 HOH 53 353 72 HOH HOH A . E 3 HOH 54 354 78 HOH HOH A . E 3 HOH 55 355 1 HOH HOH A . E 3 HOH 56 356 45 HOH HOH A . E 3 HOH 57 357 66 HOH HOH A . E 3 HOH 58 358 55 HOH HOH A . E 3 HOH 59 359 29 HOH HOH A . E 3 HOH 60 360 26 HOH HOH A . E 3 HOH 61 361 36 HOH HOH A . E 3 HOH 62 362 124 HOH HOH A . E 3 HOH 63 363 101 HOH HOH A . E 3 HOH 64 364 131 HOH HOH A . E 3 HOH 65 365 120 HOH HOH A . E 3 HOH 66 366 144 HOH HOH A . E 3 HOH 67 367 135 HOH HOH A . F 3 HOH 1 301 136 HOH HOH B . F 3 HOH 2 302 129 HOH HOH B . F 3 HOH 3 303 108 HOH HOH B . F 3 HOH 4 304 118 HOH HOH B . F 3 HOH 5 305 110 HOH HOH B . F 3 HOH 6 306 3 HOH HOH B . F 3 HOH 7 307 113 HOH HOH B . F 3 HOH 8 308 33 HOH HOH B . F 3 HOH 9 309 43 HOH HOH B . F 3 HOH 10 310 111 HOH HOH B . F 3 HOH 11 311 119 HOH HOH B . F 3 HOH 12 312 128 HOH HOH B . F 3 HOH 13 313 74 HOH HOH B . F 3 HOH 14 314 115 HOH HOH B . F 3 HOH 15 315 87 HOH HOH B . F 3 HOH 16 316 50 HOH HOH B . F 3 HOH 17 317 65 HOH HOH B . F 3 HOH 18 318 132 HOH HOH B . F 3 HOH 19 319 10 HOH HOH B . F 3 HOH 20 320 23 HOH HOH B . F 3 HOH 21 321 125 HOH HOH B . F 3 HOH 22 322 18 HOH HOH B . F 3 HOH 23 323 62 HOH HOH B . F 3 HOH 24 324 47 HOH HOH B . F 3 HOH 25 325 100 HOH HOH B . F 3 HOH 26 326 38 HOH HOH B . F 3 HOH 27 327 14 HOH HOH B . F 3 HOH 28 328 24 HOH HOH B . F 3 HOH 29 329 77 HOH HOH B . F 3 HOH 30 330 75 HOH HOH B . F 3 HOH 31 331 91 HOH HOH B . F 3 HOH 32 332 70 HOH HOH B . F 3 HOH 33 333 40 HOH HOH B . F 3 HOH 34 334 122 HOH HOH B . F 3 HOH 35 335 19 HOH HOH B . F 3 HOH 36 336 99 HOH HOH B . F 3 HOH 37 337 86 HOH HOH B . F 3 HOH 38 338 84 HOH HOH B . F 3 HOH 39 339 140 HOH HOH B . F 3 HOH 40 340 51 HOH HOH B . F 3 HOH 41 341 71 HOH HOH B . F 3 HOH 42 342 28 HOH HOH B . F 3 HOH 43 343 17 HOH HOH B . F 3 HOH 44 344 96 HOH HOH B . F 3 HOH 45 345 76 HOH HOH B . F 3 HOH 46 346 141 HOH HOH B . F 3 HOH 47 347 107 HOH HOH B . F 3 HOH 48 348 58 HOH HOH B . F 3 HOH 49 349 81 HOH HOH B . F 3 HOH 50 350 69 HOH HOH B . F 3 HOH 51 351 57 HOH HOH B . F 3 HOH 52 352 82 HOH HOH B . F 3 HOH 53 353 12 HOH HOH B . F 3 HOH 54 354 35 HOH HOH B . F 3 HOH 55 355 93 HOH HOH B . F 3 HOH 56 356 83 HOH HOH B . F 3 HOH 57 357 90 HOH HOH B . F 3 HOH 58 358 15 HOH HOH B . F 3 HOH 59 359 25 HOH HOH B . F 3 HOH 60 360 98 HOH HOH B . F 3 HOH 61 361 89 HOH HOH B . F 3 HOH 62 362 42 HOH HOH B . F 3 HOH 63 363 103 HOH HOH B . F 3 HOH 64 364 80 HOH HOH B . F 3 HOH 65 365 30 HOH HOH B . F 3 HOH 66 366 56 HOH HOH B . F 3 HOH 67 367 139 HOH HOH B . F 3 HOH 68 368 63 HOH HOH B . F 3 HOH 69 369 60 HOH HOH B . F 3 HOH 70 370 102 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3860 ? 1 MORE 14 ? 1 'SSA (A^2)' 12270 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 332 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-12-02 2 'Structure model' 1 1 2020-12-30 3 'Structure model' 1 2 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 3 'Structure model' '_database_2.pdbx_DOI' 13 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y+1/2,x+1/2,z+1/4 3 y+1/2,-x+1/2,z+3/4 4 x+1/2,-y+1/2,-z+3/4 5 -x+1/2,y+1/2,-z+1/4 6 -x,-y,z+1/2 7 y,x,-z 8 -y,-x,-z+1/2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0253 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 5 # _pdbx_entry_details.entry_id 6LF2 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A SER -1 ? A SER 2 3 1 Y 1 A HIS 0 ? A HIS 3 4 1 Y 1 A MET 1 ? A MET 4 5 1 Y 1 A SER 2 ? A SER 5 6 1 Y 1 A SER 3 ? A SER 6 7 1 Y 1 A VAL 4 ? A VAL 7 8 1 Y 1 B GLY -2 ? B GLY 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BGC C2 C N R 74 BGC C3 C N S 75 BGC C4 C N S 76 BGC C5 C N R 77 BGC C6 C N N 78 BGC C1 C N R 79 BGC O1 O N N 80 BGC O2 O N N 81 BGC O3 O N N 82 BGC O4 O N N 83 BGC O5 O N N 84 BGC O6 O N N 85 BGC H2 H N N 86 BGC H3 H N N 87 BGC H4 H N N 88 BGC H5 H N N 89 BGC H61 H N N 90 BGC H62 H N N 91 BGC H1 H N N 92 BGC HO1 H N N 93 BGC HO2 H N N 94 BGC HO3 H N N 95 BGC HO4 H N N 96 BGC HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 GAL C1 C N R 112 GAL C2 C N R 113 GAL C3 C N S 114 GAL C4 C N R 115 GAL C5 C N R 116 GAL C6 C N N 117 GAL O1 O N N 118 GAL O2 O N N 119 GAL O3 O N N 120 GAL O4 O N N 121 GAL O5 O N N 122 GAL O6 O N N 123 GAL H1 H N N 124 GAL H2 H N N 125 GAL H3 H N N 126 GAL H4 H N N 127 GAL H5 H N N 128 GAL H61 H N N 129 GAL H62 H N N 130 GAL HO1 H N N 131 GAL HO2 H N N 132 GAL HO3 H N N 133 GAL HO4 H N N 134 GAL HO6 H N N 135 GLN N N N N 136 GLN CA C N S 137 GLN C C N N 138 GLN O O N N 139 GLN CB C N N 140 GLN CG C N N 141 GLN CD C N N 142 GLN OE1 O N N 143 GLN NE2 N N N 144 GLN OXT O N N 145 GLN H H N N 146 GLN H2 H N N 147 GLN HA H N N 148 GLN HB2 H N N 149 GLN HB3 H N N 150 GLN HG2 H N N 151 GLN HG3 H N N 152 GLN HE21 H N N 153 GLN HE22 H N N 154 GLN HXT H N N 155 GLU N N N N 156 GLU CA C N S 157 GLU C C N N 158 GLU O O N N 159 GLU CB C N N 160 GLU CG C N N 161 GLU CD C N N 162 GLU OE1 O N N 163 GLU OE2 O N N 164 GLU OXT O N N 165 GLU H H N N 166 GLU H2 H N N 167 GLU HA H N N 168 GLU HB2 H N N 169 GLU HB3 H N N 170 GLU HG2 H N N 171 GLU HG3 H N N 172 GLU HE2 H N N 173 GLU HXT H N N 174 GLY N N N N 175 GLY CA C N N 176 GLY C C N N 177 GLY O O N N 178 GLY OXT O N N 179 GLY H H N N 180 GLY H2 H N N 181 GLY HA2 H N N 182 GLY HA3 H N N 183 GLY HXT H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 LEU N N N N 231 LEU CA C N S 232 LEU C C N N 233 LEU O O N N 234 LEU CB C N N 235 LEU CG C N N 236 LEU CD1 C N N 237 LEU CD2 C N N 238 LEU OXT O N N 239 LEU H H N N 240 LEU H2 H N N 241 LEU HA H N N 242 LEU HB2 H N N 243 LEU HB3 H N N 244 LEU HG H N N 245 LEU HD11 H N N 246 LEU HD12 H N N 247 LEU HD13 H N N 248 LEU HD21 H N N 249 LEU HD22 H N N 250 LEU HD23 H N N 251 LEU HXT H N N 252 LYS N N N N 253 LYS CA C N S 254 LYS C C N N 255 LYS O O N N 256 LYS CB C N N 257 LYS CG C N N 258 LYS CD C N N 259 LYS CE C N N 260 LYS NZ N N N 261 LYS OXT O N N 262 LYS H H N N 263 LYS H2 H N N 264 LYS HA H N N 265 LYS HB2 H N N 266 LYS HB3 H N N 267 LYS HG2 H N N 268 LYS HG3 H N N 269 LYS HD2 H N N 270 LYS HD3 H N N 271 LYS HE2 H N N 272 LYS HE3 H N N 273 LYS HZ1 H N N 274 LYS HZ2 H N N 275 LYS HZ3 H N N 276 LYS HXT H N N 277 MET N N N N 278 MET CA C N S 279 MET C C N N 280 MET O O N N 281 MET CB C N N 282 MET CG C N N 283 MET SD S N N 284 MET CE C N N 285 MET OXT O N N 286 MET H H N N 287 MET H2 H N N 288 MET HA H N N 289 MET HB2 H N N 290 MET HB3 H N N 291 MET HG2 H N N 292 MET HG3 H N N 293 MET HE1 H N N 294 MET HE2 H N N 295 MET HE3 H N N 296 MET HXT H N N 297 NGA C1 C N R 298 NGA C2 C N R 299 NGA C3 C N R 300 NGA C4 C N R 301 NGA C5 C N R 302 NGA C6 C N N 303 NGA C7 C N N 304 NGA C8 C N N 305 NGA N2 N N N 306 NGA O1 O N N 307 NGA O3 O N N 308 NGA O4 O N N 309 NGA O5 O N N 310 NGA O6 O N N 311 NGA O7 O N N 312 NGA H1 H N N 313 NGA H2 H N N 314 NGA H3 H N N 315 NGA H4 H N N 316 NGA H5 H N N 317 NGA H61 H N N 318 NGA H62 H N N 319 NGA H81 H N N 320 NGA H82 H N N 321 NGA H83 H N N 322 NGA HN2 H N N 323 NGA HO1 H N N 324 NGA HO3 H N N 325 NGA HO4 H N N 326 NGA HO6 H N N 327 PHE N N N N 328 PHE CA C N S 329 PHE C C N N 330 PHE O O N N 331 PHE CB C N N 332 PHE CG C Y N 333 PHE CD1 C Y N 334 PHE CD2 C Y N 335 PHE CE1 C Y N 336 PHE CE2 C Y N 337 PHE CZ C Y N 338 PHE OXT O N N 339 PHE H H N N 340 PHE H2 H N N 341 PHE HA H N N 342 PHE HB2 H N N 343 PHE HB3 H N N 344 PHE HD1 H N N 345 PHE HD2 H N N 346 PHE HE1 H N N 347 PHE HE2 H N N 348 PHE HZ H N N 349 PHE HXT H N N 350 PRO N N N N 351 PRO CA C N S 352 PRO C C N N 353 PRO O O N N 354 PRO CB C N N 355 PRO CG C N N 356 PRO CD C N N 357 PRO OXT O N N 358 PRO H H N N 359 PRO HA H N N 360 PRO HB2 H N N 361 PRO HB3 H N N 362 PRO HG2 H N N 363 PRO HG3 H N N 364 PRO HD2 H N N 365 PRO HD3 H N N 366 PRO HXT H N N 367 SER N N N N 368 SER CA C N S 369 SER C C N N 370 SER O O N N 371 SER CB C N N 372 SER OG O N N 373 SER OXT O N N 374 SER H H N N 375 SER H2 H N N 376 SER HA H N N 377 SER HB2 H N N 378 SER HB3 H N N 379 SER HG H N N 380 SER HXT H N N 381 THR N N N N 382 THR CA C N S 383 THR C C N N 384 THR O O N N 385 THR CB C N R 386 THR OG1 O N N 387 THR CG2 C N N 388 THR OXT O N N 389 THR H H N N 390 THR H2 H N N 391 THR HA H N N 392 THR HB H N N 393 THR HG1 H N N 394 THR HG21 H N N 395 THR HG22 H N N 396 THR HG23 H N N 397 THR HXT H N N 398 TRP N N N N 399 TRP CA C N S 400 TRP C C N N 401 TRP O O N N 402 TRP CB C N N 403 TRP CG C Y N 404 TRP CD1 C Y N 405 TRP CD2 C Y N 406 TRP NE1 N Y N 407 TRP CE2 C Y N 408 TRP CE3 C Y N 409 TRP CZ2 C Y N 410 TRP CZ3 C Y N 411 TRP CH2 C Y N 412 TRP OXT O N N 413 TRP H H N N 414 TRP H2 H N N 415 TRP HA H N N 416 TRP HB2 H N N 417 TRP HB3 H N N 418 TRP HD1 H N N 419 TRP HE1 H N N 420 TRP HE3 H N N 421 TRP HZ2 H N N 422 TRP HZ3 H N N 423 TRP HH2 H N N 424 TRP HXT H N N 425 TYR N N N N 426 TYR CA C N S 427 TYR C C N N 428 TYR O O N N 429 TYR CB C N N 430 TYR CG C Y N 431 TYR CD1 C Y N 432 TYR CD2 C Y N 433 TYR CE1 C Y N 434 TYR CE2 C Y N 435 TYR CZ C Y N 436 TYR OH O N N 437 TYR OXT O N N 438 TYR H H N N 439 TYR H2 H N N 440 TYR HA H N N 441 TYR HB2 H N N 442 TYR HB3 H N N 443 TYR HD1 H N N 444 TYR HD2 H N N 445 TYR HE1 H N N 446 TYR HE2 H N N 447 TYR HH H N N 448 TYR HXT H N N 449 VAL N N N N 450 VAL CA C N S 451 VAL C C N N 452 VAL O O N N 453 VAL CB C N N 454 VAL CG1 C N N 455 VAL CG2 C N N 456 VAL OXT O N N 457 VAL H H N N 458 VAL H2 H N N 459 VAL HA H N N 460 VAL HB H N N 461 VAL HG11 H N N 462 VAL HG12 H N N 463 VAL HG13 H N N 464 VAL HG21 H N N 465 VAL HG22 H N N 466 VAL HG23 H N N 467 VAL HXT H N N 468 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BGC C2 C3 sing N N 70 BGC C2 C1 sing N N 71 BGC C2 O2 sing N N 72 BGC C2 H2 sing N N 73 BGC C3 C4 sing N N 74 BGC C3 O3 sing N N 75 BGC C3 H3 sing N N 76 BGC C4 C5 sing N N 77 BGC C4 O4 sing N N 78 BGC C4 H4 sing N N 79 BGC C5 C6 sing N N 80 BGC C5 O5 sing N N 81 BGC C5 H5 sing N N 82 BGC C6 O6 sing N N 83 BGC C6 H61 sing N N 84 BGC C6 H62 sing N N 85 BGC C1 O1 sing N N 86 BGC C1 O5 sing N N 87 BGC C1 H1 sing N N 88 BGC O1 HO1 sing N N 89 BGC O2 HO2 sing N N 90 BGC O3 HO3 sing N N 91 BGC O4 HO4 sing N N 92 BGC O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 GAL C1 C2 sing N N 107 GAL C1 O1 sing N N 108 GAL C1 O5 sing N N 109 GAL C1 H1 sing N N 110 GAL C2 C3 sing N N 111 GAL C2 O2 sing N N 112 GAL C2 H2 sing N N 113 GAL C3 C4 sing N N 114 GAL C3 O3 sing N N 115 GAL C3 H3 sing N N 116 GAL C4 C5 sing N N 117 GAL C4 O4 sing N N 118 GAL C4 H4 sing N N 119 GAL C5 C6 sing N N 120 GAL C5 O5 sing N N 121 GAL C5 H5 sing N N 122 GAL C6 O6 sing N N 123 GAL C6 H61 sing N N 124 GAL C6 H62 sing N N 125 GAL O1 HO1 sing N N 126 GAL O2 HO2 sing N N 127 GAL O3 HO3 sing N N 128 GAL O4 HO4 sing N N 129 GAL O6 HO6 sing N N 130 GLN N CA sing N N 131 GLN N H sing N N 132 GLN N H2 sing N N 133 GLN CA C sing N N 134 GLN CA CB sing N N 135 GLN CA HA sing N N 136 GLN C O doub N N 137 GLN C OXT sing N N 138 GLN CB CG sing N N 139 GLN CB HB2 sing N N 140 GLN CB HB3 sing N N 141 GLN CG CD sing N N 142 GLN CG HG2 sing N N 143 GLN CG HG3 sing N N 144 GLN CD OE1 doub N N 145 GLN CD NE2 sing N N 146 GLN NE2 HE21 sing N N 147 GLN NE2 HE22 sing N N 148 GLN OXT HXT sing N N 149 GLU N CA sing N N 150 GLU N H sing N N 151 GLU N H2 sing N N 152 GLU CA C sing N N 153 GLU CA CB sing N N 154 GLU CA HA sing N N 155 GLU C O doub N N 156 GLU C OXT sing N N 157 GLU CB CG sing N N 158 GLU CB HB2 sing N N 159 GLU CB HB3 sing N N 160 GLU CG CD sing N N 161 GLU CG HG2 sing N N 162 GLU CG HG3 sing N N 163 GLU CD OE1 doub N N 164 GLU CD OE2 sing N N 165 GLU OE2 HE2 sing N N 166 GLU OXT HXT sing N N 167 GLY N CA sing N N 168 GLY N H sing N N 169 GLY N H2 sing N N 170 GLY CA C sing N N 171 GLY CA HA2 sing N N 172 GLY CA HA3 sing N N 173 GLY C O doub N N 174 GLY C OXT sing N N 175 GLY OXT HXT sing N N 176 HIS N CA sing N N 177 HIS N H sing N N 178 HIS N H2 sing N N 179 HIS CA C sing N N 180 HIS CA CB sing N N 181 HIS CA HA sing N N 182 HIS C O doub N N 183 HIS C OXT sing N N 184 HIS CB CG sing N N 185 HIS CB HB2 sing N N 186 HIS CB HB3 sing N N 187 HIS CG ND1 sing Y N 188 HIS CG CD2 doub Y N 189 HIS ND1 CE1 doub Y N 190 HIS ND1 HD1 sing N N 191 HIS CD2 NE2 sing Y N 192 HIS CD2 HD2 sing N N 193 HIS CE1 NE2 sing Y N 194 HIS CE1 HE1 sing N N 195 HIS NE2 HE2 sing N N 196 HIS OXT HXT sing N N 197 HOH O H1 sing N N 198 HOH O H2 sing N N 199 ILE N CA sing N N 200 ILE N H sing N N 201 ILE N H2 sing N N 202 ILE CA C sing N N 203 ILE CA CB sing N N 204 ILE CA HA sing N N 205 ILE C O doub N N 206 ILE C OXT sing N N 207 ILE CB CG1 sing N N 208 ILE CB CG2 sing N N 209 ILE CB HB sing N N 210 ILE CG1 CD1 sing N N 211 ILE CG1 HG12 sing N N 212 ILE CG1 HG13 sing N N 213 ILE CG2 HG21 sing N N 214 ILE CG2 HG22 sing N N 215 ILE CG2 HG23 sing N N 216 ILE CD1 HD11 sing N N 217 ILE CD1 HD12 sing N N 218 ILE CD1 HD13 sing N N 219 ILE OXT HXT sing N N 220 LEU N CA sing N N 221 LEU N H sing N N 222 LEU N H2 sing N N 223 LEU CA C sing N N 224 LEU CA CB sing N N 225 LEU CA HA sing N N 226 LEU C O doub N N 227 LEU C OXT sing N N 228 LEU CB CG sing N N 229 LEU CB HB2 sing N N 230 LEU CB HB3 sing N N 231 LEU CG CD1 sing N N 232 LEU CG CD2 sing N N 233 LEU CG HG sing N N 234 LEU CD1 HD11 sing N N 235 LEU CD1 HD12 sing N N 236 LEU CD1 HD13 sing N N 237 LEU CD2 HD21 sing N N 238 LEU CD2 HD22 sing N N 239 LEU CD2 HD23 sing N N 240 LEU OXT HXT sing N N 241 LYS N CA sing N N 242 LYS N H sing N N 243 LYS N H2 sing N N 244 LYS CA C sing N N 245 LYS CA CB sing N N 246 LYS CA HA sing N N 247 LYS C O doub N N 248 LYS C OXT sing N N 249 LYS CB CG sing N N 250 LYS CB HB2 sing N N 251 LYS CB HB3 sing N N 252 LYS CG CD sing N N 253 LYS CG HG2 sing N N 254 LYS CG HG3 sing N N 255 LYS CD CE sing N N 256 LYS CD HD2 sing N N 257 LYS CD HD3 sing N N 258 LYS CE NZ sing N N 259 LYS CE HE2 sing N N 260 LYS CE HE3 sing N N 261 LYS NZ HZ1 sing N N 262 LYS NZ HZ2 sing N N 263 LYS NZ HZ3 sing N N 264 LYS OXT HXT sing N N 265 MET N CA sing N N 266 MET N H sing N N 267 MET N H2 sing N N 268 MET CA C sing N N 269 MET CA CB sing N N 270 MET CA HA sing N N 271 MET C O doub N N 272 MET C OXT sing N N 273 MET CB CG sing N N 274 MET CB HB2 sing N N 275 MET CB HB3 sing N N 276 MET CG SD sing N N 277 MET CG HG2 sing N N 278 MET CG HG3 sing N N 279 MET SD CE sing N N 280 MET CE HE1 sing N N 281 MET CE HE2 sing N N 282 MET CE HE3 sing N N 283 MET OXT HXT sing N N 284 NGA C1 C2 sing N N 285 NGA C1 O1 sing N N 286 NGA C1 O5 sing N N 287 NGA C1 H1 sing N N 288 NGA C2 C3 sing N N 289 NGA C2 N2 sing N N 290 NGA C2 H2 sing N N 291 NGA C3 C4 sing N N 292 NGA C3 O3 sing N N 293 NGA C3 H3 sing N N 294 NGA C4 C5 sing N N 295 NGA C4 O4 sing N N 296 NGA C4 H4 sing N N 297 NGA C5 C6 sing N N 298 NGA C5 O5 sing N N 299 NGA C5 H5 sing N N 300 NGA C6 O6 sing N N 301 NGA C6 H61 sing N N 302 NGA C6 H62 sing N N 303 NGA C7 C8 sing N N 304 NGA C7 N2 sing N N 305 NGA C7 O7 doub N N 306 NGA C8 H81 sing N N 307 NGA C8 H82 sing N N 308 NGA C8 H83 sing N N 309 NGA N2 HN2 sing N N 310 NGA O1 HO1 sing N N 311 NGA O3 HO3 sing N N 312 NGA O4 HO4 sing N N 313 NGA O6 HO6 sing N N 314 PHE N CA sing N N 315 PHE N H sing N N 316 PHE N H2 sing N N 317 PHE CA C sing N N 318 PHE CA CB sing N N 319 PHE CA HA sing N N 320 PHE C O doub N N 321 PHE C OXT sing N N 322 PHE CB CG sing N N 323 PHE CB HB2 sing N N 324 PHE CB HB3 sing N N 325 PHE CG CD1 doub Y N 326 PHE CG CD2 sing Y N 327 PHE CD1 CE1 sing Y N 328 PHE CD1 HD1 sing N N 329 PHE CD2 CE2 doub Y N 330 PHE CD2 HD2 sing N N 331 PHE CE1 CZ doub Y N 332 PHE CE1 HE1 sing N N 333 PHE CE2 CZ sing Y N 334 PHE CE2 HE2 sing N N 335 PHE CZ HZ sing N N 336 PHE OXT HXT sing N N 337 PRO N CA sing N N 338 PRO N CD sing N N 339 PRO N H sing N N 340 PRO CA C sing N N 341 PRO CA CB sing N N 342 PRO CA HA sing N N 343 PRO C O doub N N 344 PRO C OXT sing N N 345 PRO CB CG sing N N 346 PRO CB HB2 sing N N 347 PRO CB HB3 sing N N 348 PRO CG CD sing N N 349 PRO CG HG2 sing N N 350 PRO CG HG3 sing N N 351 PRO CD HD2 sing N N 352 PRO CD HD3 sing N N 353 PRO OXT HXT sing N N 354 SER N CA sing N N 355 SER N H sing N N 356 SER N H2 sing N N 357 SER CA C sing N N 358 SER CA CB sing N N 359 SER CA HA sing N N 360 SER C O doub N N 361 SER C OXT sing N N 362 SER CB OG sing N N 363 SER CB HB2 sing N N 364 SER CB HB3 sing N N 365 SER OG HG sing N N 366 SER OXT HXT sing N N 367 THR N CA sing N N 368 THR N H sing N N 369 THR N H2 sing N N 370 THR CA C sing N N 371 THR CA CB sing N N 372 THR CA HA sing N N 373 THR C O doub N N 374 THR C OXT sing N N 375 THR CB OG1 sing N N 376 THR CB CG2 sing N N 377 THR CB HB sing N N 378 THR OG1 HG1 sing N N 379 THR CG2 HG21 sing N N 380 THR CG2 HG22 sing N N 381 THR CG2 HG23 sing N N 382 THR OXT HXT sing N N 383 TRP N CA sing N N 384 TRP N H sing N N 385 TRP N H2 sing N N 386 TRP CA C sing N N 387 TRP CA CB sing N N 388 TRP CA HA sing N N 389 TRP C O doub N N 390 TRP C OXT sing N N 391 TRP CB CG sing N N 392 TRP CB HB2 sing N N 393 TRP CB HB3 sing N N 394 TRP CG CD1 doub Y N 395 TRP CG CD2 sing Y N 396 TRP CD1 NE1 sing Y N 397 TRP CD1 HD1 sing N N 398 TRP CD2 CE2 doub Y N 399 TRP CD2 CE3 sing Y N 400 TRP NE1 CE2 sing Y N 401 TRP NE1 HE1 sing N N 402 TRP CE2 CZ2 sing Y N 403 TRP CE3 CZ3 doub Y N 404 TRP CE3 HE3 sing N N 405 TRP CZ2 CH2 doub Y N 406 TRP CZ2 HZ2 sing N N 407 TRP CZ3 CH2 sing Y N 408 TRP CZ3 HZ3 sing N N 409 TRP CH2 HH2 sing N N 410 TRP OXT HXT sing N N 411 TYR N CA sing N N 412 TYR N H sing N N 413 TYR N H2 sing N N 414 TYR CA C sing N N 415 TYR CA CB sing N N 416 TYR CA HA sing N N 417 TYR C O doub N N 418 TYR C OXT sing N N 419 TYR CB CG sing N N 420 TYR CB HB2 sing N N 421 TYR CB HB3 sing N N 422 TYR CG CD1 doub Y N 423 TYR CG CD2 sing Y N 424 TYR CD1 CE1 sing Y N 425 TYR CD1 HD1 sing N N 426 TYR CD2 CE2 doub Y N 427 TYR CD2 HD2 sing N N 428 TYR CE1 CZ doub Y N 429 TYR CE1 HE1 sing N N 430 TYR CE2 CZ sing Y N 431 TYR CE2 HE2 sing N N 432 TYR CZ OH sing N N 433 TYR OH HH sing N N 434 TYR OXT HXT sing N N 435 VAL N CA sing N N 436 VAL N H sing N N 437 VAL N H2 sing N N 438 VAL CA C sing N N 439 VAL CA CB sing N N 440 VAL CA HA sing N N 441 VAL C O doub N N 442 VAL C OXT sing N N 443 VAL CB CG1 sing N N 444 VAL CB CG2 sing N N 445 VAL CB HB sing N N 446 VAL CG1 HG11 sing N N 447 VAL CG1 HG12 sing N N 448 VAL CG1 HG13 sing N N 449 VAL CG2 HG21 sing N N 450 VAL CG2 HG22 sing N N 451 VAL CG2 HG23 sing N N 452 VAL OXT HXT sing N N 453 # _pdbx_audit_support.funding_organization 'Japan Science and Technology' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number JP18H02413 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 2 BGC 1 C BGC 1 L BGC 1 n C 2 GAL 2 C GAL 2 L GAL 2 n C 2 NGA 3 C NGA 3 L NGA 3 n C 2 GAL 4 C GAL 4 L GAL 4 n D 2 BGC 1 D BGC 1 M BGC 1 n D 2 GAL 2 D GAL 2 M GAL 2 n D 2 NGA 3 D NGA 3 M NGA 3 n D 2 GAL 4 D GAL 4 M GAL 4 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal NGA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpNAcb NGA 'COMMON NAME' GMML 1.0 N-acetyl-b-D-galactopyranosamine NGA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GalpNAc NGA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGalpb1-3DGalpNAcb1-4DGalpb1-4DGlcpb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,4,3/[a2122h-1b_1-5][a2112h-1b_1-5][a2112h-1b_1-5_2*NCC/3=O]/1-2-3-2/a4-b1_b4-c1_c3-d1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-Glcp]{[(4+1)][b-D-Galp]{[(4+1)][b-D-GalpNAc]{[(3+1)][b-D-Galp]{}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 GAL C1 O1 1 BGC O4 HO4 sing ? 2 2 3 NGA C1 O1 2 GAL O4 HO4 sing ? 3 2 4 GAL C1 O1 3 NGA O3 HO3 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 BGC 1 n 2 GAL 2 n 2 NGA 3 n 2 GAL 4 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 BGC ? ? BGC ? ? 'SUBJECT OF INVESTIGATION' ? 2 GAL ? ? GAL ? ? 'SUBJECT OF INVESTIGATION' ? 3 NGA ? ? NGA ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6LF1 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details 'sedimentation velocity confirms dimeric assembly' # _space_group.name_H-M_alt 'P 41 21 2' _space_group.name_Hall 'P 4abw 2nw' _space_group.IT_number 92 _space_group.crystal_system tetragonal _space_group.id 1 #