data_6LFF # _entry.id 6LFF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6LFF pdb_00006lff 10.2210/pdb6lff/pdb WWPDB D_1300014573 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB '2O49 contains the same protein complexed with an unmodified DNA' 2O49 unspecified PDB '2O4A contains the same protein complexed with an unmodified DNA' 2O4A unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6LFF _pdbx_database_status.recvd_initial_deposition_date 2019-12-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Akutsu, Y.' 1 ? 'Kubota, T.' 2 ? 'Yamasaki, T.' 3 ? 'Yamasaki, K.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 48 _citation.language ? _citation.page_first 4551 _citation.page_last 4561 _citation.title ;Enhanced affinity of racemic phosphorothioate DNA with transcription factor SATB1 arising from diastereomer-specific hydrogen bonds and hydrophobic contacts. ; _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkaa170 _citation.pdbx_database_id_PubMed 32187371 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yamasaki, K.' 1 ? primary 'Akutsu, Y.' 2 ? primary 'Yamasaki, T.' 3 ? primary 'Miyagishi, M.' 4 ? primary 'Kubota, T.' 5 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 6LFF _cell.details ? _cell.formula_units_Z ? _cell.length_a 45.320 _cell.length_a_esd ? _cell.length_b 45.320 _cell.length_b_esd ? _cell.length_c 97.862 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LFF _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA-binding protein SATB1' 10952.381 2 ? ? ? ? 2 polymer syn ;DNA (5'-D(*GP*(C7R)P*(PST)P*AP*AP*TP*AP*TP*AP*TP*GP*C)-3') ; 3693.548 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*GP*CP*AP*TP*(AS)P*(PST)P*(AS)P*(PST)P*TP*AP*GP*C)-3') ; 3725.678 1 ? ? ? ? 4 water nat water 18.015 69 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'transcription factor SATB1,Special AT-rich sequence-binding protein 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMNTEVSSEIYQWVRDELKRAGISQAVFARVAFNRTQGLLSEILRKEEDPKTASQSLLVNLRAMQNFLQLPEAERDRI YQDERERSLRKRK ; ;GSHMNTEVSSEIYQWVRDELKRAGISQAVFARVAFNRTQGLLSEILRKEEDPKTASQSLLVNLRAMQNFLQLPEAERDRI YQDERERSLRKRK ; A,B ? 2 polydeoxyribonucleotide no yes '(DG)(C7R)(PST)(DA)(DA)(DT)(DA)(DT)(DA)(DT)(DG)(DC)' GXTAATATATGC C ? 3 polydeoxyribonucleotide no yes '(DG)(DC)(DA)(DT)(AS)(PST)(AS)(PST)(DT)(DA)(DG)(DC)' GCATATATTAGC D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ASN n 1 6 THR n 1 7 GLU n 1 8 VAL n 1 9 SER n 1 10 SER n 1 11 GLU n 1 12 ILE n 1 13 TYR n 1 14 GLN n 1 15 TRP n 1 16 VAL n 1 17 ARG n 1 18 ASP n 1 19 GLU n 1 20 LEU n 1 21 LYS n 1 22 ARG n 1 23 ALA n 1 24 GLY n 1 25 ILE n 1 26 SER n 1 27 GLN n 1 28 ALA n 1 29 VAL n 1 30 PHE n 1 31 ALA n 1 32 ARG n 1 33 VAL n 1 34 ALA n 1 35 PHE n 1 36 ASN n 1 37 ARG n 1 38 THR n 1 39 GLN n 1 40 GLY n 1 41 LEU n 1 42 LEU n 1 43 SER n 1 44 GLU n 1 45 ILE n 1 46 LEU n 1 47 ARG n 1 48 LYS n 1 49 GLU n 1 50 GLU n 1 51 ASP n 1 52 PRO n 1 53 LYS n 1 54 THR n 1 55 ALA n 1 56 SER n 1 57 GLN n 1 58 SER n 1 59 LEU n 1 60 LEU n 1 61 VAL n 1 62 ASN n 1 63 LEU n 1 64 ARG n 1 65 ALA n 1 66 MET n 1 67 GLN n 1 68 ASN n 1 69 PHE n 1 70 LEU n 1 71 GLN n 1 72 LEU n 1 73 PRO n 1 74 GLU n 1 75 ALA n 1 76 GLU n 1 77 ARG n 1 78 ASP n 1 79 ARG n 1 80 ILE n 1 81 TYR n 1 82 GLN n 1 83 ASP n 1 84 GLU n 1 85 ARG n 1 86 GLU n 1 87 ARG n 1 88 SER n 1 89 LEU n 1 90 ARG n 1 91 LYS n 1 92 ARG n 1 93 LYS n 2 1 DG n 2 2 C7R n 2 3 PST n 2 4 DA n 2 5 DA n 2 6 DT n 2 7 DA n 2 8 DT n 2 9 DA n 2 10 DT n 2 11 DG n 2 12 DC n 3 1 DG n 3 2 DC n 3 3 DA n 3 4 DT n 3 5 AS n 3 6 PST n 3 7 AS n 3 8 PST n 3 9 DT n 3 10 DA n 3 11 DG n 3 12 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 93 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SATB1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 12 'synthetic construct' ? 32630 ? 3 1 sample 1 12 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SATB1_HUMAN Q01826 ? 1 ;NTEVSSEIYQWVRDELKRAGISQAVFARVAFNRTQGLLSEILRKEEDPKTASQSLLVNLRAMQNFLQLPEAERDRIYQDE RERSL ; 368 2 PDB 6LFF 6LFF ? 2 ? 1 3 PDB 6LFF 6LFF ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6LFF A 5 ? 89 ? Q01826 368 ? 452 ? 368 452 2 1 6LFF B 5 ? 89 ? Q01826 368 ? 452 ? 368 452 3 2 6LFF C 1 ? 12 ? 6LFF 1 ? 12 ? 1 12 4 3 6LFF D 1 ? 12 ? 6LFF 1 ? 12 ? 1 12 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6LFF GLY A 1 ? UNP Q01826 ? ? 'expression tag' 364 1 1 6LFF SER A 2 ? UNP Q01826 ? ? 'expression tag' 365 2 1 6LFF HIS A 3 ? UNP Q01826 ? ? 'expression tag' 366 3 1 6LFF MET A 4 ? UNP Q01826 ? ? 'expression tag' 367 4 1 6LFF ARG A 90 ? UNP Q01826 ? ? 'expression tag' 453 5 1 6LFF LYS A 91 ? UNP Q01826 ? ? 'expression tag' 454 6 1 6LFF ARG A 92 ? UNP Q01826 ? ? 'expression tag' 455 7 1 6LFF LYS A 93 ? UNP Q01826 ? ? 'expression tag' 456 8 2 6LFF GLY B 1 ? UNP Q01826 ? ? 'expression tag' 364 9 2 6LFF SER B 2 ? UNP Q01826 ? ? 'expression tag' 365 10 2 6LFF HIS B 3 ? UNP Q01826 ? ? 'expression tag' 366 11 2 6LFF MET B 4 ? UNP Q01826 ? ? 'expression tag' 367 12 2 6LFF ARG B 90 ? UNP Q01826 ? ? 'expression tag' 453 13 2 6LFF LYS B 91 ? UNP Q01826 ? ? 'expression tag' 454 14 2 6LFF ARG B 92 ? UNP Q01826 ? ? 'expression tag' 455 15 2 6LFF LYS B 93 ? UNP Q01826 ? ? 'expression tag' 456 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 AS 'DNA linking' n ;2-DEOXY-ADENOSINE -5'-THIO-MONOPHOSPHATE ; ? 'C10 H14 N5 O5 P S' 347.287 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C7R 'DNA linking' n "2'-deoxy-5'-O-thiophosphonocytidine" ;2'-deoxy-5'-O-thiophosphonocytidine (thiophospho connection isoform 1) ; 'C9 H14 N3 O6 P S' 323.263 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PST 'DNA linking' n "THYMIDINE-5'-THIOPHOSPHATE" ? 'C10 H15 N2 O7 P S' 338.274 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6LFF _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.17 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 37.84 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '50 mM Tris-HCl (pH 8.5), 20% polyethylene glycol monomethyl ether 550 (Sigma-Aldrich), 20% ethylene glycol, and 10 mM MgCl2' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 95 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 270' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-05-30 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NW12A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline AR-NW12A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6LFF _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.79 _reflns.d_resolution_low 48.94 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 19724 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 93.2 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.7 _reflns.pdbx_Rmerge_I_obs 0.105 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.79 _reflns_shell.d_res_low 1.89 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 4.8 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 3103 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.353 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.1 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.01 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] -0.01 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 0.02 _refine.B_iso_max ? _refine.B_iso_mean 38.704 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.925 _refine.correlation_coeff_Fo_to_Fc_free 0.882 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6LFF _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.79 _refine.ls_d_res_low 19.63 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 18596 _refine.ls_number_reflns_R_free 1112 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 93.29 _refine.ls_percent_reflns_R_free 5.6 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.23207 _refine.ls_R_factor_R_free 0.27122 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.22962 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2O4A _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.181 _refine.pdbx_overall_ESU_R_Free 0.163 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 3.538 _refine.overall_SU_ML 0.110 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.details ? _refine_hist.d_res_high 1.79 _refine_hist.d_res_low 19.63 _refine_hist.number_atoms_solvent 69 _refine_hist.number_atoms_total 1886 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1346 _refine_hist.pdbx_number_atoms_nucleic_acid 471 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 0.012 1943 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.018 1575 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.224 1.513 2728 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.269 1.848 3681 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 4.651 5.000 162 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 29.336 20.833 96 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.304 15.000 261 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 19.035 15.000 19 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.062 0.200 255 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 0.020 1803 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 417 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 2.022 4.263 654 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 2.023 4.258 653 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 3.295 6.378 814 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 3.293 6.383 815 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 1.833 3.941 1289 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 1.832 3.943 1290 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 3.034 5.838 1909 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 5.052 43.286 2330 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 5.051 43.302 2329 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.792 _refine_ls_shell.d_res_low 1.839 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 60 _refine_ls_shell.number_reflns_R_work 1487 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.330 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.284 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6LFF _struct.title 'transcription factor SATB1 CUTr1 domain in complex with a phosphorothioate DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6LFF _struct_keywords.text 'DNA-binding protein, DNA modification, Transcription factor, TRANSCRIPTION, TRANSCRIPTION-DNA complex' _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLU A 11 ? GLY A 24 ? GLU A 374 GLY A 387 1 ? 14 HELX_P HELX_P2 AA2 SER A 26 ? ASN A 36 ? SER A 389 ASN A 399 1 ? 11 HELX_P HELX_P3 AA3 THR A 38 ? GLU A 49 ? THR A 401 GLU A 412 1 ? 12 HELX_P HELX_P4 AA4 SER A 56 ? GLN A 71 ? SER A 419 GLN A 434 1 ? 16 HELX_P HELX_P5 AA5 PRO A 73 ? LEU A 89 ? PRO A 436 LEU A 452 1 ? 17 HELX_P HELX_P6 AA6 GLU B 11 ? GLY B 24 ? GLU B 374 GLY B 387 1 ? 14 HELX_P HELX_P7 AA7 SER B 26 ? ASN B 36 ? SER B 389 ASN B 399 1 ? 11 HELX_P HELX_P8 AA8 THR B 38 ? GLU B 49 ? THR B 401 GLU B 412 1 ? 12 HELX_P HELX_P9 AA9 SER B 56 ? GLN B 71 ? SER B 419 GLN B 434 1 ? 16 HELX_P HELX_P10 AB1 PRO B 73 ? LEU B 89 ? PRO B 436 LEU B 452 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C DG 1 "O3'" A ? ? 1_555 C C7R 2 P A ? C DG 1 C C7R 2 1_555 ? ? ? ? ? ? ? 1.599 ? ? covale2 covale both ? C DG 1 "O3'" B ? ? 1_555 C C7R 2 P B ? C DG 1 C C7R 2 1_555 ? ? ? ? ? ? ? 1.599 ? ? covale3 covale both ? C C7R 2 "O3'" A ? ? 1_555 C PST 3 P A ? C C7R 2 C PST 3 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale4 covale both ? C C7R 2 "O3'" B ? ? 1_555 C PST 3 P B ? C C7R 2 C PST 3 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale5 covale both ? C PST 3 "O3'" ? ? ? 1_555 C DA 4 P ? ? C PST 3 C DA 4 1_555 ? ? ? ? ? ? ? 1.589 ? ? covale6 covale both ? D DT 4 "O3'" A ? ? 1_555 D AS 5 P A ? D DT 4 D AS 5 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale7 covale both ? D DT 4 "O3'" B ? ? 1_555 D AS 5 P B ? D DT 4 D AS 5 1_555 ? ? ? ? ? ? ? 1.595 ? ? covale8 covale both ? D AS 5 "O3'" A ? ? 1_555 D PST 6 P A ? D AS 5 D PST 6 1_555 ? ? ? ? ? ? ? 1.614 ? ? covale9 covale both ? D AS 5 "O3'" B ? ? 1_555 D PST 6 P B ? D AS 5 D PST 6 1_555 ? ? ? ? ? ? ? 1.611 ? ? covale10 covale both ? D PST 6 "O3'" A ? ? 1_555 D AS 7 P A ? D PST 6 D AS 7 1_555 ? ? ? ? ? ? ? 1.581 ? ? covale11 covale both ? D PST 6 "O3'" B ? ? 1_555 D AS 7 P B ? D PST 6 D AS 7 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale12 covale both ? D AS 7 "O3'" A ? ? 1_555 D PST 8 P A ? D AS 7 D PST 8 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale13 covale both ? D AS 7 "O3'" B ? ? 1_555 D PST 8 P B ? D AS 7 D PST 8 1_555 ? ? ? ? ? ? ? 1.595 ? ? covale14 covale both ? D PST 8 "O3'" ? ? ? 1_555 D DT 9 P ? ? D PST 8 D DT 9 1_555 ? ? ? ? ? ? ? 1.611 ? ? hydrog1 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 12 N3 ? ? C DG 1 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 12 O2 ? ? C DG 1 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 12 N4 ? ? C DG 1 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C C7R 2 N3 ? ? ? 1_555 D DG 11 N1 ? ? C C7R 2 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C C7R 2 N4 ? ? ? 1_555 D DG 11 O6 ? ? C C7R 2 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C C7R 2 O2 ? ? ? 1_555 D DG 11 N2 ? ? C C7R 2 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C PST 3 N3 ? ? ? 1_555 D DA 10 N1 ? ? C PST 3 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C PST 3 O4 ? ? ? 1_555 D DA 10 N6 ? ? C PST 3 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 9 N3 ? ? C DA 4 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 9 O4 ? ? C DA 4 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D PST 8 N3 ? ? C DA 5 D PST 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D PST 8 O4 ? ? C DA 5 D PST 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D AS 7 N1 ? ? C DT 6 D AS 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D AS 7 N6 ? ? C DT 6 D AS 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DA 7 N1 ? ? ? 1_555 D PST 6 N3 ? ? C DA 7 D PST 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DA 7 N6 ? ? ? 1_555 D PST 6 O4 ? ? C DA 7 D PST 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DT 8 N3 ? ? ? 1_555 D AS 5 N1 ? ? C DT 8 D AS 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DT 8 O4 ? ? ? 1_555 D AS 5 N6 ? ? C DT 8 D AS 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DA 9 N1 ? ? ? 1_555 D DT 4 N3 ? ? C DA 9 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DA 9 N6 ? ? ? 1_555 D DT 4 O4 ? ? C DA 9 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DT 10 N3 ? ? ? 1_555 D DA 3 N1 ? ? C DT 10 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DT 10 O4 ? ? ? 1_555 D DA 3 N6 ? ? C DT 10 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 11 N1 ? ? ? 1_555 D DC 2 N3 ? ? C DG 11 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DG 11 N2 ? ? ? 1_555 D DC 2 O2 ? ? C DG 11 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DG 11 O6 ? ? ? 1_555 D DC 2 N4 ? ? C DG 11 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _atom_sites.entry_id 6LFF _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.022065 _atom_sites.fract_transf_matrix[1][2] 0.012739 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025479 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010218 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 364 ? ? ? A . n A 1 2 SER 2 365 ? ? ? A . n A 1 3 HIS 3 366 ? ? ? A . n A 1 4 MET 4 367 ? ? ? A . n A 1 5 ASN 5 368 ? ? ? A . n A 1 6 THR 6 369 ? ? ? A . n A 1 7 GLU 7 370 ? ? ? A . n A 1 8 VAL 8 371 371 VAL VAL A . n A 1 9 SER 9 372 372 SER SER A . n A 1 10 SER 10 373 373 SER SER A . n A 1 11 GLU 11 374 374 GLU GLU A . n A 1 12 ILE 12 375 375 ILE ILE A . n A 1 13 TYR 13 376 376 TYR TYR A . n A 1 14 GLN 14 377 377 GLN GLN A . n A 1 15 TRP 15 378 378 TRP TRP A . n A 1 16 VAL 16 379 379 VAL VAL A . n A 1 17 ARG 17 380 380 ARG ARG A . n A 1 18 ASP 18 381 381 ASP ASP A . n A 1 19 GLU 19 382 382 GLU GLU A . n A 1 20 LEU 20 383 383 LEU LEU A . n A 1 21 LYS 21 384 384 LYS LYS A . n A 1 22 ARG 22 385 385 ARG ARG A . n A 1 23 ALA 23 386 386 ALA ALA A . n A 1 24 GLY 24 387 387 GLY GLY A . n A 1 25 ILE 25 388 388 ILE ILE A . n A 1 26 SER 26 389 389 SER SER A . n A 1 27 GLN 27 390 390 GLN GLN A . n A 1 28 ALA 28 391 391 ALA ALA A . n A 1 29 VAL 29 392 392 VAL VAL A . n A 1 30 PHE 30 393 393 PHE PHE A . n A 1 31 ALA 31 394 394 ALA ALA A . n A 1 32 ARG 32 395 395 ARG ARG A . n A 1 33 VAL 33 396 396 VAL VAL A . n A 1 34 ALA 34 397 397 ALA ALA A . n A 1 35 PHE 35 398 398 PHE PHE A . n A 1 36 ASN 36 399 399 ASN ASN A . n A 1 37 ARG 37 400 400 ARG ARG A . n A 1 38 THR 38 401 401 THR THR A . n A 1 39 GLN 39 402 402 GLN GLN A . n A 1 40 GLY 40 403 403 GLY GLY A . n A 1 41 LEU 41 404 404 LEU LEU A . n A 1 42 LEU 42 405 405 LEU LEU A . n A 1 43 SER 43 406 406 SER SER A . n A 1 44 GLU 44 407 407 GLU GLU A . n A 1 45 ILE 45 408 408 ILE ILE A . n A 1 46 LEU 46 409 409 LEU LEU A . n A 1 47 ARG 47 410 410 ARG ARG A . n A 1 48 LYS 48 411 411 LYS LYS A . n A 1 49 GLU 49 412 412 GLU GLU A . n A 1 50 GLU 50 413 413 GLU GLU A . n A 1 51 ASP 51 414 414 ASP ASP A . n A 1 52 PRO 52 415 415 PRO PRO A . n A 1 53 LYS 53 416 416 LYS LYS A . n A 1 54 THR 54 417 417 THR THR A . n A 1 55 ALA 55 418 418 ALA ALA A . n A 1 56 SER 56 419 419 SER SER A . n A 1 57 GLN 57 420 420 GLN GLN A . n A 1 58 SER 58 421 421 SER SER A . n A 1 59 LEU 59 422 422 LEU LEU A . n A 1 60 LEU 60 423 423 LEU LEU A . n A 1 61 VAL 61 424 424 VAL VAL A . n A 1 62 ASN 62 425 425 ASN ASN A . n A 1 63 LEU 63 426 426 LEU LEU A . n A 1 64 ARG 64 427 427 ARG ARG A . n A 1 65 ALA 65 428 428 ALA ALA A . n A 1 66 MET 66 429 429 MET MET A . n A 1 67 GLN 67 430 430 GLN GLN A . n A 1 68 ASN 68 431 431 ASN ASN A . n A 1 69 PHE 69 432 432 PHE PHE A . n A 1 70 LEU 70 433 433 LEU LEU A . n A 1 71 GLN 71 434 434 GLN GLN A . n A 1 72 LEU 72 435 435 LEU LEU A . n A 1 73 PRO 73 436 436 PRO PRO A . n A 1 74 GLU 74 437 437 GLU GLU A . n A 1 75 ALA 75 438 438 ALA ALA A . n A 1 76 GLU 76 439 439 GLU GLU A . n A 1 77 ARG 77 440 440 ARG ARG A . n A 1 78 ASP 78 441 441 ASP ASP A . n A 1 79 ARG 79 442 442 ARG ARG A . n A 1 80 ILE 80 443 443 ILE ILE A . n A 1 81 TYR 81 444 444 TYR TYR A . n A 1 82 GLN 82 445 445 GLN GLN A . n A 1 83 ASP 83 446 446 ASP ASP A . n A 1 84 GLU 84 447 447 GLU GLU A . n A 1 85 ARG 85 448 448 ARG ARG A . n A 1 86 GLU 86 449 449 GLU GLU A . n A 1 87 ARG 87 450 450 ARG ARG A . n A 1 88 SER 88 451 451 SER SER A . n A 1 89 LEU 89 452 452 LEU LEU A . n A 1 90 ARG 90 453 ? ? ? A . n A 1 91 LYS 91 454 ? ? ? A . n A 1 92 ARG 92 455 ? ? ? A . n A 1 93 LYS 93 456 ? ? ? A . n B 1 1 GLY 1 364 ? ? ? B . n B 1 2 SER 2 365 ? ? ? B . n B 1 3 HIS 3 366 ? ? ? B . n B 1 4 MET 4 367 ? ? ? B . n B 1 5 ASN 5 368 ? ? ? B . n B 1 6 THR 6 369 ? ? ? B . n B 1 7 GLU 7 370 ? ? ? B . n B 1 8 VAL 8 371 371 VAL VAL B . n B 1 9 SER 9 372 372 SER SER B . n B 1 10 SER 10 373 373 SER SER B . n B 1 11 GLU 11 374 374 GLU GLU B . n B 1 12 ILE 12 375 375 ILE ILE B . n B 1 13 TYR 13 376 376 TYR TYR B . n B 1 14 GLN 14 377 377 GLN GLN B . n B 1 15 TRP 15 378 378 TRP TRP B . n B 1 16 VAL 16 379 379 VAL VAL B . n B 1 17 ARG 17 380 380 ARG ARG B . n B 1 18 ASP 18 381 381 ASP ASP B . n B 1 19 GLU 19 382 382 GLU GLU B . n B 1 20 LEU 20 383 383 LEU LEU B . n B 1 21 LYS 21 384 384 LYS LYS B . n B 1 22 ARG 22 385 385 ARG ARG B . n B 1 23 ALA 23 386 386 ALA ALA B . n B 1 24 GLY 24 387 387 GLY GLY B . n B 1 25 ILE 25 388 388 ILE ILE B . n B 1 26 SER 26 389 389 SER SER B . n B 1 27 GLN 27 390 390 GLN GLN B . n B 1 28 ALA 28 391 391 ALA ALA B . n B 1 29 VAL 29 392 392 VAL VAL B . n B 1 30 PHE 30 393 393 PHE PHE B . n B 1 31 ALA 31 394 394 ALA ALA B . n B 1 32 ARG 32 395 395 ARG ARG B . n B 1 33 VAL 33 396 396 VAL VAL B . n B 1 34 ALA 34 397 397 ALA ALA B . n B 1 35 PHE 35 398 398 PHE PHE B . n B 1 36 ASN 36 399 399 ASN ASN B . n B 1 37 ARG 37 400 400 ARG ARG B . n B 1 38 THR 38 401 401 THR THR B . n B 1 39 GLN 39 402 402 GLN GLN B . n B 1 40 GLY 40 403 403 GLY GLY B . n B 1 41 LEU 41 404 404 LEU LEU B . n B 1 42 LEU 42 405 405 LEU LEU B . n B 1 43 SER 43 406 406 SER SER B . n B 1 44 GLU 44 407 407 GLU GLU B . n B 1 45 ILE 45 408 408 ILE ILE B . n B 1 46 LEU 46 409 409 LEU LEU B . n B 1 47 ARG 47 410 410 ARG ARG B . n B 1 48 LYS 48 411 411 LYS LYS B . n B 1 49 GLU 49 412 412 GLU GLU B . n B 1 50 GLU 50 413 413 GLU GLU B . n B 1 51 ASP 51 414 414 ASP ASP B . n B 1 52 PRO 52 415 415 PRO PRO B . n B 1 53 LYS 53 416 416 LYS LYS B . n B 1 54 THR 54 417 417 THR THR B . n B 1 55 ALA 55 418 418 ALA ALA B . n B 1 56 SER 56 419 419 SER SER B . n B 1 57 GLN 57 420 420 GLN GLN B . n B 1 58 SER 58 421 421 SER SER B . n B 1 59 LEU 59 422 422 LEU LEU B . n B 1 60 LEU 60 423 423 LEU LEU B . n B 1 61 VAL 61 424 424 VAL VAL B . n B 1 62 ASN 62 425 425 ASN ASN B . n B 1 63 LEU 63 426 426 LEU LEU B . n B 1 64 ARG 64 427 427 ARG ARG B . n B 1 65 ALA 65 428 428 ALA ALA B . n B 1 66 MET 66 429 429 MET MET B . n B 1 67 GLN 67 430 430 GLN GLN B . n B 1 68 ASN 68 431 431 ASN ASN B . n B 1 69 PHE 69 432 432 PHE PHE B . n B 1 70 LEU 70 433 433 LEU LEU B . n B 1 71 GLN 71 434 434 GLN GLN B . n B 1 72 LEU 72 435 435 LEU LEU B . n B 1 73 PRO 73 436 436 PRO PRO B . n B 1 74 GLU 74 437 437 GLU GLU B . n B 1 75 ALA 75 438 438 ALA ALA B . n B 1 76 GLU 76 439 439 GLU GLU B . n B 1 77 ARG 77 440 440 ARG ARG B . n B 1 78 ASP 78 441 441 ASP ASP B . n B 1 79 ARG 79 442 442 ARG ARG B . n B 1 80 ILE 80 443 443 ILE ILE B . n B 1 81 TYR 81 444 444 TYR TYR B . n B 1 82 GLN 82 445 445 GLN GLN B . n B 1 83 ASP 83 446 446 ASP ASP B . n B 1 84 GLU 84 447 447 GLU GLU B . n B 1 85 ARG 85 448 448 ARG ARG B . n B 1 86 GLU 86 449 449 GLU GLU B . n B 1 87 ARG 87 450 450 ARG ARG B . n B 1 88 SER 88 451 451 SER SER B . n B 1 89 LEU 89 452 452 LEU LEU B . n B 1 90 ARG 90 453 ? ? ? B . n B 1 91 LYS 91 454 ? ? ? B . n B 1 92 ARG 92 455 ? ? ? B . n B 1 93 LYS 93 456 ? ? ? B . n C 2 1 DG 1 1 1 DG DG C . n C 2 2 C7R 2 2 2 C7R C7R C . n C 2 3 PST 3 3 3 PST PST C . n C 2 4 DA 4 4 4 DA DA C . n C 2 5 DA 5 5 5 DA DA C . n C 2 6 DT 6 6 6 DT DT C . n C 2 7 DA 7 7 7 DA DA C . n C 2 8 DT 8 8 8 DT DT C . n C 2 9 DA 9 9 9 DA DA C . n C 2 10 DT 10 10 10 DT DT C . n C 2 11 DG 11 11 11 DG DG C . n C 2 12 DC 12 12 12 DC DC C . n D 3 1 DG 1 1 1 DG DG D . n D 3 2 DC 2 2 2 DC DC D . n D 3 3 DA 3 3 3 DA DA D . n D 3 4 DT 4 4 4 DT DT D . n D 3 5 AS 5 5 5 AS AS D . n D 3 6 PST 6 6 6 PST PST D . n D 3 7 AS 7 7 7 AS AS D . n D 3 8 PST 8 8 8 PST PST D . n D 3 9 DT 9 9 9 DT DT D . n D 3 10 DA 10 10 10 DA DA D . n D 3 11 DG 11 11 11 DG DG D . n D 3 12 DC 12 12 12 DC DC D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 501 49 HOH HOH A . E 4 HOH 2 502 66 HOH HOH A . E 4 HOH 3 503 64 HOH HOH A . E 4 HOH 4 504 41 HOH HOH A . E 4 HOH 5 505 67 HOH HOH A . E 4 HOH 6 506 2 HOH HOH A . E 4 HOH 7 507 68 HOH HOH A . E 4 HOH 8 508 10 HOH HOH A . E 4 HOH 9 509 15 HOH HOH A . E 4 HOH 10 510 62 HOH HOH A . E 4 HOH 11 511 39 HOH HOH A . E 4 HOH 12 512 16 HOH HOH A . E 4 HOH 13 513 1 HOH HOH A . E 4 HOH 14 514 61 HOH HOH A . E 4 HOH 15 515 51 HOH HOH A . E 4 HOH 16 516 47 HOH HOH A . E 4 HOH 17 517 52 HOH HOH A . E 4 HOH 18 518 63 HOH HOH A . E 4 HOH 19 519 46 HOH HOH A . E 4 HOH 20 520 35 HOH HOH A . E 4 HOH 21 521 57 HOH HOH A . F 4 HOH 1 501 5 HOH HOH B . F 4 HOH 2 502 25 HOH HOH B . F 4 HOH 3 503 45 HOH HOH B . F 4 HOH 4 504 32 HOH HOH B . F 4 HOH 5 505 65 HOH HOH B . F 4 HOH 6 506 8 HOH HOH B . F 4 HOH 7 507 18 HOH HOH B . F 4 HOH 8 508 21 HOH HOH B . F 4 HOH 9 509 20 HOH HOH B . F 4 HOH 10 510 22 HOH HOH B . F 4 HOH 11 511 55 HOH HOH B . F 4 HOH 12 512 48 HOH HOH B . F 4 HOH 13 513 28 HOH HOH B . F 4 HOH 14 514 23 HOH HOH B . F 4 HOH 15 515 4 HOH HOH B . F 4 HOH 16 516 54 HOH HOH B . F 4 HOH 17 517 59 HOH HOH B . F 4 HOH 18 518 27 HOH HOH B . F 4 HOH 19 519 34 HOH HOH B . G 4 HOH 1 101 60 HOH HOH C . G 4 HOH 2 102 9 HOH HOH C . G 4 HOH 3 103 13 HOH HOH C . G 4 HOH 4 104 40 HOH HOH C . G 4 HOH 5 105 53 HOH HOH C . G 4 HOH 6 106 3 HOH HOH C . G 4 HOH 7 107 43 HOH HOH C . G 4 HOH 8 108 14 HOH HOH C . G 4 HOH 9 109 17 HOH HOH C . G 4 HOH 10 110 11 HOH HOH C . G 4 HOH 11 111 33 HOH HOH C . G 4 HOH 12 112 37 HOH HOH C . G 4 HOH 13 113 30 HOH HOH C . G 4 HOH 14 114 26 HOH HOH C . G 4 HOH 15 115 36 HOH HOH C . H 4 HOH 1 101 69 HOH HOH D . H 4 HOH 2 102 19 HOH HOH D . H 4 HOH 3 103 44 HOH HOH D . H 4 HOH 4 104 42 HOH HOH D . H 4 HOH 5 105 56 HOH HOH D . H 4 HOH 6 106 24 HOH HOH D . H 4 HOH 7 107 38 HOH HOH D . H 4 HOH 8 108 6 HOH HOH D . H 4 HOH 9 109 7 HOH HOH D . H 4 HOH 10 110 12 HOH HOH D . H 4 HOH 11 111 29 HOH HOH D . H 4 HOH 12 112 31 HOH HOH D . H 4 HOH 13 113 58 HOH HOH D . H 4 HOH 14 114 50 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,G,H 2 1 B,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4630 ? 1 MORE 2 ? 1 'SSA (A^2)' 7800 ? 2 'ABSA (A^2)' 0 ? 2 MORE 0 ? 2 'SSA (A^2)' 5020 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-04-01 2 'Structure model' 1 1 2020-05-13 3 'Structure model' 1 2 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 3 'Structure model' '_database_2.pdbx_DOI' 5 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0238 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # _pdbx_entry_details.entry_id 6LFF _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 398 ? ? -148.30 19.07 2 1 PHE B 398 ? ? -147.64 14.29 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B ARG 450 ? CG ? B ARG 87 CG 2 1 Y 1 B ARG 450 ? CD ? B ARG 87 CD 3 1 Y 1 B ARG 450 ? NE ? B ARG 87 NE 4 1 Y 1 B ARG 450 ? CZ ? B ARG 87 CZ 5 1 Y 1 B ARG 450 ? NH1 ? B ARG 87 NH1 6 1 Y 1 B ARG 450 ? NH2 ? B ARG 87 NH2 7 1 Y 1 C DC 12 ? "C5'" ? C DC 12 "C5'" 8 1 Y 1 C DC 12 ? "C4'" ? C DC 12 "C4'" 9 1 Y 1 C DC 12 ? "O4'" ? C DC 12 "O4'" 10 1 Y 1 C DC 12 ? "C3'" ? C DC 12 "C3'" 11 1 Y 1 C DC 12 ? "O3'" ? C DC 12 "O3'" 12 1 Y 1 C DC 12 ? "C2'" ? C DC 12 "C2'" 13 1 Y 1 C DC 12 ? "C1'" ? C DC 12 "C1'" 14 1 Y 1 C DC 12 ? N1 ? C DC 12 N1 15 1 Y 1 C DC 12 ? C2 ? C DC 12 C2 16 1 Y 1 C DC 12 ? O2 ? C DC 12 O2 17 1 Y 1 C DC 12 ? N3 ? C DC 12 N3 18 1 Y 1 C DC 12 ? C4 ? C DC 12 C4 19 1 Y 1 C DC 12 ? N4 ? C DC 12 N4 20 1 Y 1 C DC 12 ? C5 ? C DC 12 C5 21 1 Y 1 C DC 12 ? C6 ? C DC 12 C6 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 364 ? A GLY 1 2 1 Y 1 A SER 365 ? A SER 2 3 1 Y 1 A HIS 366 ? A HIS 3 4 1 Y 1 A MET 367 ? A MET 4 5 1 Y 1 A ASN 368 ? A ASN 5 6 1 Y 1 A THR 369 ? A THR 6 7 1 Y 1 A GLU 370 ? A GLU 7 8 1 Y 1 A ARG 453 ? A ARG 90 9 1 Y 1 A LYS 454 ? A LYS 91 10 1 Y 1 A ARG 455 ? A ARG 92 11 1 Y 1 A LYS 456 ? A LYS 93 12 1 Y 1 B GLY 364 ? B GLY 1 13 1 Y 1 B SER 365 ? B SER 2 14 1 Y 1 B HIS 366 ? B HIS 3 15 1 Y 1 B MET 367 ? B MET 4 16 1 Y 1 B ASN 368 ? B ASN 5 17 1 Y 1 B THR 369 ? B THR 6 18 1 Y 1 B GLU 370 ? B GLU 7 19 1 Y 1 B ARG 453 ? B ARG 90 20 1 Y 1 B LYS 454 ? B LYS 91 21 1 Y 1 B ARG 455 ? B ARG 92 22 1 Y 1 B LYS 456 ? B LYS 93 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 AS P P N N 41 AS OP1 O N N 42 AS S2P S N N 43 AS OP3 O N N 44 AS "O5'" O N N 45 AS "C5'" C N N 46 AS "C4'" C N R 47 AS "O4'" O N N 48 AS "C3'" C N S 49 AS "O3'" O N N 50 AS "C2'" C N N 51 AS "C1'" C N R 52 AS N9 N Y N 53 AS C8 C Y N 54 AS N7 N Y N 55 AS C5 C Y N 56 AS C6 C Y N 57 AS N6 N N N 58 AS N1 N Y N 59 AS C2 C Y N 60 AS N3 N Y N 61 AS C4 C Y N 62 AS HOP1 H N N 63 AS HOP3 H N N 64 AS "H5'" H N N 65 AS "H5''" H N N 66 AS "H4'" H N N 67 AS "H3'" H N N 68 AS "HO3'" H N N 69 AS "H2'" H N N 70 AS "H2''" H N N 71 AS "H1'" H N N 72 AS H8 H N N 73 AS HN61 H N N 74 AS HN62 H N N 75 AS H2 H N N 76 ASN N N N N 77 ASN CA C N S 78 ASN C C N N 79 ASN O O N N 80 ASN CB C N N 81 ASN CG C N N 82 ASN OD1 O N N 83 ASN ND2 N N N 84 ASN OXT O N N 85 ASN H H N N 86 ASN H2 H N N 87 ASN HA H N N 88 ASN HB2 H N N 89 ASN HB3 H N N 90 ASN HD21 H N N 91 ASN HD22 H N N 92 ASN HXT H N N 93 ASP N N N N 94 ASP CA C N S 95 ASP C C N N 96 ASP O O N N 97 ASP CB C N N 98 ASP CG C N N 99 ASP OD1 O N N 100 ASP OD2 O N N 101 ASP OXT O N N 102 ASP H H N N 103 ASP H2 H N N 104 ASP HA H N N 105 ASP HB2 H N N 106 ASP HB3 H N N 107 ASP HD2 H N N 108 ASP HXT H N N 109 C7R P P N N 110 C7R "C5'" C N N 111 C7R "O5'" O N N 112 C7R "C4'" C N R 113 C7R "O4'" O N N 114 C7R "C3'" C N S 115 C7R "O3'" O N N 116 C7R "C2'" C N N 117 C7R "C1'" C N R 118 C7R N1 N N N 119 C7R C2 C N N 120 C7R O2 O N N 121 C7R N3 N N N 122 C7R C4 C N N 123 C7R N4 N N N 124 C7R C5 C N N 125 C7R C6 C N N 126 C7R OP1 O N N 127 C7R SP2 S N N 128 C7R OP3 O N N 129 C7R "H5'2" H N N 130 C7R "H5'1" H N N 131 C7R "H4'" H N N 132 C7R "H3'" H N N 133 C7R H1 H N N 134 C7R "H2'1" H N N 135 C7R "H2'2" H N N 136 C7R "H1'" H N N 137 C7R H42 H N N 138 C7R H41 H N N 139 C7R H5 H N N 140 C7R H6 H N N 141 C7R HSP2 H N N 142 C7R HOP3 H N N 143 DA OP3 O N N 144 DA P P N N 145 DA OP1 O N N 146 DA OP2 O N N 147 DA "O5'" O N N 148 DA "C5'" C N N 149 DA "C4'" C N R 150 DA "O4'" O N N 151 DA "C3'" C N S 152 DA "O3'" O N N 153 DA "C2'" C N N 154 DA "C1'" C N R 155 DA N9 N Y N 156 DA C8 C Y N 157 DA N7 N Y N 158 DA C5 C Y N 159 DA C6 C Y N 160 DA N6 N N N 161 DA N1 N Y N 162 DA C2 C Y N 163 DA N3 N Y N 164 DA C4 C Y N 165 DA HOP3 H N N 166 DA HOP2 H N N 167 DA "H5'" H N N 168 DA "H5''" H N N 169 DA "H4'" H N N 170 DA "H3'" H N N 171 DA "HO3'" H N N 172 DA "H2'" H N N 173 DA "H2''" H N N 174 DA "H1'" H N N 175 DA H8 H N N 176 DA H61 H N N 177 DA H62 H N N 178 DA H2 H N N 179 DC OP3 O N N 180 DC P P N N 181 DC OP1 O N N 182 DC OP2 O N N 183 DC "O5'" O N N 184 DC "C5'" C N N 185 DC "C4'" C N R 186 DC "O4'" O N N 187 DC "C3'" C N S 188 DC "O3'" O N N 189 DC "C2'" C N N 190 DC "C1'" C N R 191 DC N1 N N N 192 DC C2 C N N 193 DC O2 O N N 194 DC N3 N N N 195 DC C4 C N N 196 DC N4 N N N 197 DC C5 C N N 198 DC C6 C N N 199 DC HOP3 H N N 200 DC HOP2 H N N 201 DC "H5'" H N N 202 DC "H5''" H N N 203 DC "H4'" H N N 204 DC "H3'" H N N 205 DC "HO3'" H N N 206 DC "H2'" H N N 207 DC "H2''" H N N 208 DC "H1'" H N N 209 DC H41 H N N 210 DC H42 H N N 211 DC H5 H N N 212 DC H6 H N N 213 DG OP3 O N N 214 DG P P N N 215 DG OP1 O N N 216 DG OP2 O N N 217 DG "O5'" O N N 218 DG "C5'" C N N 219 DG "C4'" C N R 220 DG "O4'" O N N 221 DG "C3'" C N S 222 DG "O3'" O N N 223 DG "C2'" C N N 224 DG "C1'" C N R 225 DG N9 N Y N 226 DG C8 C Y N 227 DG N7 N Y N 228 DG C5 C Y N 229 DG C6 C N N 230 DG O6 O N N 231 DG N1 N N N 232 DG C2 C N N 233 DG N2 N N N 234 DG N3 N N N 235 DG C4 C Y N 236 DG HOP3 H N N 237 DG HOP2 H N N 238 DG "H5'" H N N 239 DG "H5''" H N N 240 DG "H4'" H N N 241 DG "H3'" H N N 242 DG "HO3'" H N N 243 DG "H2'" H N N 244 DG "H2''" H N N 245 DG "H1'" H N N 246 DG H8 H N N 247 DG H1 H N N 248 DG H21 H N N 249 DG H22 H N N 250 DT OP3 O N N 251 DT P P N N 252 DT OP1 O N N 253 DT OP2 O N N 254 DT "O5'" O N N 255 DT "C5'" C N N 256 DT "C4'" C N R 257 DT "O4'" O N N 258 DT "C3'" C N S 259 DT "O3'" O N N 260 DT "C2'" C N N 261 DT "C1'" C N R 262 DT N1 N N N 263 DT C2 C N N 264 DT O2 O N N 265 DT N3 N N N 266 DT C4 C N N 267 DT O4 O N N 268 DT C5 C N N 269 DT C7 C N N 270 DT C6 C N N 271 DT HOP3 H N N 272 DT HOP2 H N N 273 DT "H5'" H N N 274 DT "H5''" H N N 275 DT "H4'" H N N 276 DT "H3'" H N N 277 DT "HO3'" H N N 278 DT "H2'" H N N 279 DT "H2''" H N N 280 DT "H1'" H N N 281 DT H3 H N N 282 DT H71 H N N 283 DT H72 H N N 284 DT H73 H N N 285 DT H6 H N N 286 GLN N N N N 287 GLN CA C N S 288 GLN C C N N 289 GLN O O N N 290 GLN CB C N N 291 GLN CG C N N 292 GLN CD C N N 293 GLN OE1 O N N 294 GLN NE2 N N N 295 GLN OXT O N N 296 GLN H H N N 297 GLN H2 H N N 298 GLN HA H N N 299 GLN HB2 H N N 300 GLN HB3 H N N 301 GLN HG2 H N N 302 GLN HG3 H N N 303 GLN HE21 H N N 304 GLN HE22 H N N 305 GLN HXT H N N 306 GLU N N N N 307 GLU CA C N S 308 GLU C C N N 309 GLU O O N N 310 GLU CB C N N 311 GLU CG C N N 312 GLU CD C N N 313 GLU OE1 O N N 314 GLU OE2 O N N 315 GLU OXT O N N 316 GLU H H N N 317 GLU H2 H N N 318 GLU HA H N N 319 GLU HB2 H N N 320 GLU HB3 H N N 321 GLU HG2 H N N 322 GLU HG3 H N N 323 GLU HE2 H N N 324 GLU HXT H N N 325 GLY N N N N 326 GLY CA C N N 327 GLY C C N N 328 GLY O O N N 329 GLY OXT O N N 330 GLY H H N N 331 GLY H2 H N N 332 GLY HA2 H N N 333 GLY HA3 H N N 334 GLY HXT H N N 335 HIS N N N N 336 HIS CA C N S 337 HIS C C N N 338 HIS O O N N 339 HIS CB C N N 340 HIS CG C Y N 341 HIS ND1 N Y N 342 HIS CD2 C Y N 343 HIS CE1 C Y N 344 HIS NE2 N Y N 345 HIS OXT O N N 346 HIS H H N N 347 HIS H2 H N N 348 HIS HA H N N 349 HIS HB2 H N N 350 HIS HB3 H N N 351 HIS HD1 H N N 352 HIS HD2 H N N 353 HIS HE1 H N N 354 HIS HE2 H N N 355 HIS HXT H N N 356 HOH O O N N 357 HOH H1 H N N 358 HOH H2 H N N 359 ILE N N N N 360 ILE CA C N S 361 ILE C C N N 362 ILE O O N N 363 ILE CB C N S 364 ILE CG1 C N N 365 ILE CG2 C N N 366 ILE CD1 C N N 367 ILE OXT O N N 368 ILE H H N N 369 ILE H2 H N N 370 ILE HA H N N 371 ILE HB H N N 372 ILE HG12 H N N 373 ILE HG13 H N N 374 ILE HG21 H N N 375 ILE HG22 H N N 376 ILE HG23 H N N 377 ILE HD11 H N N 378 ILE HD12 H N N 379 ILE HD13 H N N 380 ILE HXT H N N 381 LEU N N N N 382 LEU CA C N S 383 LEU C C N N 384 LEU O O N N 385 LEU CB C N N 386 LEU CG C N N 387 LEU CD1 C N N 388 LEU CD2 C N N 389 LEU OXT O N N 390 LEU H H N N 391 LEU H2 H N N 392 LEU HA H N N 393 LEU HB2 H N N 394 LEU HB3 H N N 395 LEU HG H N N 396 LEU HD11 H N N 397 LEU HD12 H N N 398 LEU HD13 H N N 399 LEU HD21 H N N 400 LEU HD22 H N N 401 LEU HD23 H N N 402 LEU HXT H N N 403 LYS N N N N 404 LYS CA C N S 405 LYS C C N N 406 LYS O O N N 407 LYS CB C N N 408 LYS CG C N N 409 LYS CD C N N 410 LYS CE C N N 411 LYS NZ N N N 412 LYS OXT O N N 413 LYS H H N N 414 LYS H2 H N N 415 LYS HA H N N 416 LYS HB2 H N N 417 LYS HB3 H N N 418 LYS HG2 H N N 419 LYS HG3 H N N 420 LYS HD2 H N N 421 LYS HD3 H N N 422 LYS HE2 H N N 423 LYS HE3 H N N 424 LYS HZ1 H N N 425 LYS HZ2 H N N 426 LYS HZ3 H N N 427 LYS HXT H N N 428 MET N N N N 429 MET CA C N S 430 MET C C N N 431 MET O O N N 432 MET CB C N N 433 MET CG C N N 434 MET SD S N N 435 MET CE C N N 436 MET OXT O N N 437 MET H H N N 438 MET H2 H N N 439 MET HA H N N 440 MET HB2 H N N 441 MET HB3 H N N 442 MET HG2 H N N 443 MET HG3 H N N 444 MET HE1 H N N 445 MET HE2 H N N 446 MET HE3 H N N 447 MET HXT H N N 448 PHE N N N N 449 PHE CA C N S 450 PHE C C N N 451 PHE O O N N 452 PHE CB C N N 453 PHE CG C Y N 454 PHE CD1 C Y N 455 PHE CD2 C Y N 456 PHE CE1 C Y N 457 PHE CE2 C Y N 458 PHE CZ C Y N 459 PHE OXT O N N 460 PHE H H N N 461 PHE H2 H N N 462 PHE HA H N N 463 PHE HB2 H N N 464 PHE HB3 H N N 465 PHE HD1 H N N 466 PHE HD2 H N N 467 PHE HE1 H N N 468 PHE HE2 H N N 469 PHE HZ H N N 470 PHE HXT H N N 471 PRO N N N N 472 PRO CA C N S 473 PRO C C N N 474 PRO O O N N 475 PRO CB C N N 476 PRO CG C N N 477 PRO CD C N N 478 PRO OXT O N N 479 PRO H H N N 480 PRO HA H N N 481 PRO HB2 H N N 482 PRO HB3 H N N 483 PRO HG2 H N N 484 PRO HG3 H N N 485 PRO HD2 H N N 486 PRO HD3 H N N 487 PRO HXT H N N 488 PST P P N N 489 PST OP1 O N N 490 PST OP2 O N N 491 PST SP S N N 492 PST "O5'" O N N 493 PST "C5'" C N N 494 PST "C4'" C N R 495 PST "O4'" O N N 496 PST "C3'" C N S 497 PST "O3'" O N N 498 PST "C2'" C N N 499 PST "C1'" C N R 500 PST N1 N N N 501 PST C2 C N N 502 PST O2 O N N 503 PST N3 N N N 504 PST C4 C N N 505 PST O4 O N N 506 PST C5 C N N 507 PST C5M C N N 508 PST C6 C N N 509 PST HOP1 H N N 510 PST HOP2 H N N 511 PST "H5'" H N N 512 PST "H5''" H N N 513 PST "H4'" H N N 514 PST "H3'" H N N 515 PST HO3 H N N 516 PST "H2'" H N N 517 PST "H2''" H N N 518 PST "H1'" H N N 519 PST HN3 H N N 520 PST H71 H N N 521 PST H72 H N N 522 PST H73 H N N 523 PST H6 H N N 524 SER N N N N 525 SER CA C N S 526 SER C C N N 527 SER O O N N 528 SER CB C N N 529 SER OG O N N 530 SER OXT O N N 531 SER H H N N 532 SER H2 H N N 533 SER HA H N N 534 SER HB2 H N N 535 SER HB3 H N N 536 SER HG H N N 537 SER HXT H N N 538 THR N N N N 539 THR CA C N S 540 THR C C N N 541 THR O O N N 542 THR CB C N R 543 THR OG1 O N N 544 THR CG2 C N N 545 THR OXT O N N 546 THR H H N N 547 THR H2 H N N 548 THR HA H N N 549 THR HB H N N 550 THR HG1 H N N 551 THR HG21 H N N 552 THR HG22 H N N 553 THR HG23 H N N 554 THR HXT H N N 555 TRP N N N N 556 TRP CA C N S 557 TRP C C N N 558 TRP O O N N 559 TRP CB C N N 560 TRP CG C Y N 561 TRP CD1 C Y N 562 TRP CD2 C Y N 563 TRP NE1 N Y N 564 TRP CE2 C Y N 565 TRP CE3 C Y N 566 TRP CZ2 C Y N 567 TRP CZ3 C Y N 568 TRP CH2 C Y N 569 TRP OXT O N N 570 TRP H H N N 571 TRP H2 H N N 572 TRP HA H N N 573 TRP HB2 H N N 574 TRP HB3 H N N 575 TRP HD1 H N N 576 TRP HE1 H N N 577 TRP HE3 H N N 578 TRP HZ2 H N N 579 TRP HZ3 H N N 580 TRP HH2 H N N 581 TRP HXT H N N 582 TYR N N N N 583 TYR CA C N S 584 TYR C C N N 585 TYR O O N N 586 TYR CB C N N 587 TYR CG C Y N 588 TYR CD1 C Y N 589 TYR CD2 C Y N 590 TYR CE1 C Y N 591 TYR CE2 C Y N 592 TYR CZ C Y N 593 TYR OH O N N 594 TYR OXT O N N 595 TYR H H N N 596 TYR H2 H N N 597 TYR HA H N N 598 TYR HB2 H N N 599 TYR HB3 H N N 600 TYR HD1 H N N 601 TYR HD2 H N N 602 TYR HE1 H N N 603 TYR HE2 H N N 604 TYR HH H N N 605 TYR HXT H N N 606 VAL N N N N 607 VAL CA C N S 608 VAL C C N N 609 VAL O O N N 610 VAL CB C N N 611 VAL CG1 C N N 612 VAL CG2 C N N 613 VAL OXT O N N 614 VAL H H N N 615 VAL H2 H N N 616 VAL HA H N N 617 VAL HB H N N 618 VAL HG11 H N N 619 VAL HG12 H N N 620 VAL HG13 H N N 621 VAL HG21 H N N 622 VAL HG22 H N N 623 VAL HG23 H N N 624 VAL HXT H N N 625 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 AS P OP1 sing N N 39 AS P S2P doub N N 40 AS P OP3 sing N N 41 AS P "O5'" sing N N 42 AS OP1 HOP1 sing N N 43 AS OP3 HOP3 sing N N 44 AS "O5'" "C5'" sing N N 45 AS "C5'" "C4'" sing N N 46 AS "C5'" "H5'" sing N N 47 AS "C5'" "H5''" sing N N 48 AS "C4'" "O4'" sing N N 49 AS "C4'" "C3'" sing N N 50 AS "C4'" "H4'" sing N N 51 AS "O4'" "C1'" sing N N 52 AS "C3'" "O3'" sing N N 53 AS "C3'" "C2'" sing N N 54 AS "C3'" "H3'" sing N N 55 AS "O3'" "HO3'" sing N N 56 AS "C2'" "C1'" sing N N 57 AS "C2'" "H2'" sing N N 58 AS "C2'" "H2''" sing N N 59 AS "C1'" N9 sing N N 60 AS "C1'" "H1'" sing N N 61 AS N9 C8 sing Y N 62 AS N9 C4 sing Y N 63 AS C8 N7 doub Y N 64 AS C8 H8 sing N N 65 AS N7 C5 sing Y N 66 AS C5 C6 sing Y N 67 AS C5 C4 doub Y N 68 AS C6 N6 sing N N 69 AS C6 N1 doub Y N 70 AS N6 HN61 sing N N 71 AS N6 HN62 sing N N 72 AS N1 C2 sing Y N 73 AS C2 N3 doub Y N 74 AS C2 H2 sing N N 75 AS N3 C4 sing Y N 76 ASN N CA sing N N 77 ASN N H sing N N 78 ASN N H2 sing N N 79 ASN CA C sing N N 80 ASN CA CB sing N N 81 ASN CA HA sing N N 82 ASN C O doub N N 83 ASN C OXT sing N N 84 ASN CB CG sing N N 85 ASN CB HB2 sing N N 86 ASN CB HB3 sing N N 87 ASN CG OD1 doub N N 88 ASN CG ND2 sing N N 89 ASN ND2 HD21 sing N N 90 ASN ND2 HD22 sing N N 91 ASN OXT HXT sing N N 92 ASP N CA sing N N 93 ASP N H sing N N 94 ASP N H2 sing N N 95 ASP CA C sing N N 96 ASP CA CB sing N N 97 ASP CA HA sing N N 98 ASP C O doub N N 99 ASP C OXT sing N N 100 ASP CB CG sing N N 101 ASP CB HB2 sing N N 102 ASP CB HB3 sing N N 103 ASP CG OD1 doub N N 104 ASP CG OD2 sing N N 105 ASP OD2 HD2 sing N N 106 ASP OXT HXT sing N N 107 C7R "O3'" "C3'" sing N N 108 C7R O2 C2 doub N N 109 C7R "O4'" "C1'" sing N N 110 C7R "O4'" "C4'" sing N N 111 C7R "C1'" "C2'" sing N N 112 C7R "C1'" N1 sing N N 113 C7R "C3'" "C4'" sing N N 114 C7R "C3'" "C2'" sing N N 115 C7R "C4'" "C5'" sing N N 116 C7R C2 N1 sing N N 117 C7R C2 N3 sing N N 118 C7R N1 C6 sing N N 119 C7R N3 C4 doub N N 120 C7R "C5'" "O5'" sing N N 121 C7R "O5'" P sing N N 122 C7R C6 C5 doub N N 123 C7R C4 C5 sing N N 124 C7R C4 N4 sing N N 125 C7R OP1 P doub N N 126 C7R P SP2 sing N N 127 C7R P OP3 sing N N 128 C7R "C5'" "H5'2" sing N N 129 C7R "C5'" "H5'1" sing N N 130 C7R "C4'" "H4'" sing N N 131 C7R "C3'" "H3'" sing N N 132 C7R "O3'" H1 sing N N 133 C7R "C2'" "H2'1" sing N N 134 C7R "C2'" "H2'2" sing N N 135 C7R "C1'" "H1'" sing N N 136 C7R N4 H42 sing N N 137 C7R N4 H41 sing N N 138 C7R C5 H5 sing N N 139 C7R C6 H6 sing N N 140 C7R SP2 HSP2 sing N N 141 C7R OP3 HOP3 sing N N 142 DA OP3 P sing N N 143 DA OP3 HOP3 sing N N 144 DA P OP1 doub N N 145 DA P OP2 sing N N 146 DA P "O5'" sing N N 147 DA OP2 HOP2 sing N N 148 DA "O5'" "C5'" sing N N 149 DA "C5'" "C4'" sing N N 150 DA "C5'" "H5'" sing N N 151 DA "C5'" "H5''" sing N N 152 DA "C4'" "O4'" sing N N 153 DA "C4'" "C3'" sing N N 154 DA "C4'" "H4'" sing N N 155 DA "O4'" "C1'" sing N N 156 DA "C3'" "O3'" sing N N 157 DA "C3'" "C2'" sing N N 158 DA "C3'" "H3'" sing N N 159 DA "O3'" "HO3'" sing N N 160 DA "C2'" "C1'" sing N N 161 DA "C2'" "H2'" sing N N 162 DA "C2'" "H2''" sing N N 163 DA "C1'" N9 sing N N 164 DA "C1'" "H1'" sing N N 165 DA N9 C8 sing Y N 166 DA N9 C4 sing Y N 167 DA C8 N7 doub Y N 168 DA C8 H8 sing N N 169 DA N7 C5 sing Y N 170 DA C5 C6 sing Y N 171 DA C5 C4 doub Y N 172 DA C6 N6 sing N N 173 DA C6 N1 doub Y N 174 DA N6 H61 sing N N 175 DA N6 H62 sing N N 176 DA N1 C2 sing Y N 177 DA C2 N3 doub Y N 178 DA C2 H2 sing N N 179 DA N3 C4 sing Y N 180 DC OP3 P sing N N 181 DC OP3 HOP3 sing N N 182 DC P OP1 doub N N 183 DC P OP2 sing N N 184 DC P "O5'" sing N N 185 DC OP2 HOP2 sing N N 186 DC "O5'" "C5'" sing N N 187 DC "C5'" "C4'" sing N N 188 DC "C5'" "H5'" sing N N 189 DC "C5'" "H5''" sing N N 190 DC "C4'" "O4'" sing N N 191 DC "C4'" "C3'" sing N N 192 DC "C4'" "H4'" sing N N 193 DC "O4'" "C1'" sing N N 194 DC "C3'" "O3'" sing N N 195 DC "C3'" "C2'" sing N N 196 DC "C3'" "H3'" sing N N 197 DC "O3'" "HO3'" sing N N 198 DC "C2'" "C1'" sing N N 199 DC "C2'" "H2'" sing N N 200 DC "C2'" "H2''" sing N N 201 DC "C1'" N1 sing N N 202 DC "C1'" "H1'" sing N N 203 DC N1 C2 sing N N 204 DC N1 C6 sing N N 205 DC C2 O2 doub N N 206 DC C2 N3 sing N N 207 DC N3 C4 doub N N 208 DC C4 N4 sing N N 209 DC C4 C5 sing N N 210 DC N4 H41 sing N N 211 DC N4 H42 sing N N 212 DC C5 C6 doub N N 213 DC C5 H5 sing N N 214 DC C6 H6 sing N N 215 DG OP3 P sing N N 216 DG OP3 HOP3 sing N N 217 DG P OP1 doub N N 218 DG P OP2 sing N N 219 DG P "O5'" sing N N 220 DG OP2 HOP2 sing N N 221 DG "O5'" "C5'" sing N N 222 DG "C5'" "C4'" sing N N 223 DG "C5'" "H5'" sing N N 224 DG "C5'" "H5''" sing N N 225 DG "C4'" "O4'" sing N N 226 DG "C4'" "C3'" sing N N 227 DG "C4'" "H4'" sing N N 228 DG "O4'" "C1'" sing N N 229 DG "C3'" "O3'" sing N N 230 DG "C3'" "C2'" sing N N 231 DG "C3'" "H3'" sing N N 232 DG "O3'" "HO3'" sing N N 233 DG "C2'" "C1'" sing N N 234 DG "C2'" "H2'" sing N N 235 DG "C2'" "H2''" sing N N 236 DG "C1'" N9 sing N N 237 DG "C1'" "H1'" sing N N 238 DG N9 C8 sing Y N 239 DG N9 C4 sing Y N 240 DG C8 N7 doub Y N 241 DG C8 H8 sing N N 242 DG N7 C5 sing Y N 243 DG C5 C6 sing N N 244 DG C5 C4 doub Y N 245 DG C6 O6 doub N N 246 DG C6 N1 sing N N 247 DG N1 C2 sing N N 248 DG N1 H1 sing N N 249 DG C2 N2 sing N N 250 DG C2 N3 doub N N 251 DG N2 H21 sing N N 252 DG N2 H22 sing N N 253 DG N3 C4 sing N N 254 DT OP3 P sing N N 255 DT OP3 HOP3 sing N N 256 DT P OP1 doub N N 257 DT P OP2 sing N N 258 DT P "O5'" sing N N 259 DT OP2 HOP2 sing N N 260 DT "O5'" "C5'" sing N N 261 DT "C5'" "C4'" sing N N 262 DT "C5'" "H5'" sing N N 263 DT "C5'" "H5''" sing N N 264 DT "C4'" "O4'" sing N N 265 DT "C4'" "C3'" sing N N 266 DT "C4'" "H4'" sing N N 267 DT "O4'" "C1'" sing N N 268 DT "C3'" "O3'" sing N N 269 DT "C3'" "C2'" sing N N 270 DT "C3'" "H3'" sing N N 271 DT "O3'" "HO3'" sing N N 272 DT "C2'" "C1'" sing N N 273 DT "C2'" "H2'" sing N N 274 DT "C2'" "H2''" sing N N 275 DT "C1'" N1 sing N N 276 DT "C1'" "H1'" sing N N 277 DT N1 C2 sing N N 278 DT N1 C6 sing N N 279 DT C2 O2 doub N N 280 DT C2 N3 sing N N 281 DT N3 C4 sing N N 282 DT N3 H3 sing N N 283 DT C4 O4 doub N N 284 DT C4 C5 sing N N 285 DT C5 C7 sing N N 286 DT C5 C6 doub N N 287 DT C7 H71 sing N N 288 DT C7 H72 sing N N 289 DT C7 H73 sing N N 290 DT C6 H6 sing N N 291 GLN N CA sing N N 292 GLN N H sing N N 293 GLN N H2 sing N N 294 GLN CA C sing N N 295 GLN CA CB sing N N 296 GLN CA HA sing N N 297 GLN C O doub N N 298 GLN C OXT sing N N 299 GLN CB CG sing N N 300 GLN CB HB2 sing N N 301 GLN CB HB3 sing N N 302 GLN CG CD sing N N 303 GLN CG HG2 sing N N 304 GLN CG HG3 sing N N 305 GLN CD OE1 doub N N 306 GLN CD NE2 sing N N 307 GLN NE2 HE21 sing N N 308 GLN NE2 HE22 sing N N 309 GLN OXT HXT sing N N 310 GLU N CA sing N N 311 GLU N H sing N N 312 GLU N H2 sing N N 313 GLU CA C sing N N 314 GLU CA CB sing N N 315 GLU CA HA sing N N 316 GLU C O doub N N 317 GLU C OXT sing N N 318 GLU CB CG sing N N 319 GLU CB HB2 sing N N 320 GLU CB HB3 sing N N 321 GLU CG CD sing N N 322 GLU CG HG2 sing N N 323 GLU CG HG3 sing N N 324 GLU CD OE1 doub N N 325 GLU CD OE2 sing N N 326 GLU OE2 HE2 sing N N 327 GLU OXT HXT sing N N 328 GLY N CA sing N N 329 GLY N H sing N N 330 GLY N H2 sing N N 331 GLY CA C sing N N 332 GLY CA HA2 sing N N 333 GLY CA HA3 sing N N 334 GLY C O doub N N 335 GLY C OXT sing N N 336 GLY OXT HXT sing N N 337 HIS N CA sing N N 338 HIS N H sing N N 339 HIS N H2 sing N N 340 HIS CA C sing N N 341 HIS CA CB sing N N 342 HIS CA HA sing N N 343 HIS C O doub N N 344 HIS C OXT sing N N 345 HIS CB CG sing N N 346 HIS CB HB2 sing N N 347 HIS CB HB3 sing N N 348 HIS CG ND1 sing Y N 349 HIS CG CD2 doub Y N 350 HIS ND1 CE1 doub Y N 351 HIS ND1 HD1 sing N N 352 HIS CD2 NE2 sing Y N 353 HIS CD2 HD2 sing N N 354 HIS CE1 NE2 sing Y N 355 HIS CE1 HE1 sing N N 356 HIS NE2 HE2 sing N N 357 HIS OXT HXT sing N N 358 HOH O H1 sing N N 359 HOH O H2 sing N N 360 ILE N CA sing N N 361 ILE N H sing N N 362 ILE N H2 sing N N 363 ILE CA C sing N N 364 ILE CA CB sing N N 365 ILE CA HA sing N N 366 ILE C O doub N N 367 ILE C OXT sing N N 368 ILE CB CG1 sing N N 369 ILE CB CG2 sing N N 370 ILE CB HB sing N N 371 ILE CG1 CD1 sing N N 372 ILE CG1 HG12 sing N N 373 ILE CG1 HG13 sing N N 374 ILE CG2 HG21 sing N N 375 ILE CG2 HG22 sing N N 376 ILE CG2 HG23 sing N N 377 ILE CD1 HD11 sing N N 378 ILE CD1 HD12 sing N N 379 ILE CD1 HD13 sing N N 380 ILE OXT HXT sing N N 381 LEU N CA sing N N 382 LEU N H sing N N 383 LEU N H2 sing N N 384 LEU CA C sing N N 385 LEU CA CB sing N N 386 LEU CA HA sing N N 387 LEU C O doub N N 388 LEU C OXT sing N N 389 LEU CB CG sing N N 390 LEU CB HB2 sing N N 391 LEU CB HB3 sing N N 392 LEU CG CD1 sing N N 393 LEU CG CD2 sing N N 394 LEU CG HG sing N N 395 LEU CD1 HD11 sing N N 396 LEU CD1 HD12 sing N N 397 LEU CD1 HD13 sing N N 398 LEU CD2 HD21 sing N N 399 LEU CD2 HD22 sing N N 400 LEU CD2 HD23 sing N N 401 LEU OXT HXT sing N N 402 LYS N CA sing N N 403 LYS N H sing N N 404 LYS N H2 sing N N 405 LYS CA C sing N N 406 LYS CA CB sing N N 407 LYS CA HA sing N N 408 LYS C O doub N N 409 LYS C OXT sing N N 410 LYS CB CG sing N N 411 LYS CB HB2 sing N N 412 LYS CB HB3 sing N N 413 LYS CG CD sing N N 414 LYS CG HG2 sing N N 415 LYS CG HG3 sing N N 416 LYS CD CE sing N N 417 LYS CD HD2 sing N N 418 LYS CD HD3 sing N N 419 LYS CE NZ sing N N 420 LYS CE HE2 sing N N 421 LYS CE HE3 sing N N 422 LYS NZ HZ1 sing N N 423 LYS NZ HZ2 sing N N 424 LYS NZ HZ3 sing N N 425 LYS OXT HXT sing N N 426 MET N CA sing N N 427 MET N H sing N N 428 MET N H2 sing N N 429 MET CA C sing N N 430 MET CA CB sing N N 431 MET CA HA sing N N 432 MET C O doub N N 433 MET C OXT sing N N 434 MET CB CG sing N N 435 MET CB HB2 sing N N 436 MET CB HB3 sing N N 437 MET CG SD sing N N 438 MET CG HG2 sing N N 439 MET CG HG3 sing N N 440 MET SD CE sing N N 441 MET CE HE1 sing N N 442 MET CE HE2 sing N N 443 MET CE HE3 sing N N 444 MET OXT HXT sing N N 445 PHE N CA sing N N 446 PHE N H sing N N 447 PHE N H2 sing N N 448 PHE CA C sing N N 449 PHE CA CB sing N N 450 PHE CA HA sing N N 451 PHE C O doub N N 452 PHE C OXT sing N N 453 PHE CB CG sing N N 454 PHE CB HB2 sing N N 455 PHE CB HB3 sing N N 456 PHE CG CD1 doub Y N 457 PHE CG CD2 sing Y N 458 PHE CD1 CE1 sing Y N 459 PHE CD1 HD1 sing N N 460 PHE CD2 CE2 doub Y N 461 PHE CD2 HD2 sing N N 462 PHE CE1 CZ doub Y N 463 PHE CE1 HE1 sing N N 464 PHE CE2 CZ sing Y N 465 PHE CE2 HE2 sing N N 466 PHE CZ HZ sing N N 467 PHE OXT HXT sing N N 468 PRO N CA sing N N 469 PRO N CD sing N N 470 PRO N H sing N N 471 PRO CA C sing N N 472 PRO CA CB sing N N 473 PRO CA HA sing N N 474 PRO C O doub N N 475 PRO C OXT sing N N 476 PRO CB CG sing N N 477 PRO CB HB2 sing N N 478 PRO CB HB3 sing N N 479 PRO CG CD sing N N 480 PRO CG HG2 sing N N 481 PRO CG HG3 sing N N 482 PRO CD HD2 sing N N 483 PRO CD HD3 sing N N 484 PRO OXT HXT sing N N 485 PST P OP1 sing N N 486 PST P OP2 sing N N 487 PST P SP doub N N 488 PST P "O5'" sing N N 489 PST OP1 HOP1 sing N N 490 PST OP2 HOP2 sing N N 491 PST "O5'" "C5'" sing N N 492 PST "C5'" "C4'" sing N N 493 PST "C5'" "H5'" sing N N 494 PST "C5'" "H5''" sing N N 495 PST "C4'" "O4'" sing N N 496 PST "C4'" "C3'" sing N N 497 PST "C4'" "H4'" sing N N 498 PST "O4'" "C1'" sing N N 499 PST "C3'" "O3'" sing N N 500 PST "C3'" "C2'" sing N N 501 PST "C3'" "H3'" sing N N 502 PST "O3'" HO3 sing N N 503 PST "C2'" "C1'" sing N N 504 PST "C2'" "H2'" sing N N 505 PST "C2'" "H2''" sing N N 506 PST "C1'" N1 sing N N 507 PST "C1'" "H1'" sing N N 508 PST N1 C2 sing N N 509 PST N1 C6 sing N N 510 PST C2 O2 doub N N 511 PST C2 N3 sing N N 512 PST N3 C4 sing N N 513 PST N3 HN3 sing N N 514 PST C4 O4 doub N N 515 PST C4 C5 sing N N 516 PST C5 C5M sing N N 517 PST C5 C6 doub N N 518 PST C5M H71 sing N N 519 PST C5M H72 sing N N 520 PST C5M H73 sing N N 521 PST C6 H6 sing N N 522 SER N CA sing N N 523 SER N H sing N N 524 SER N H2 sing N N 525 SER CA C sing N N 526 SER CA CB sing N N 527 SER CA HA sing N N 528 SER C O doub N N 529 SER C OXT sing N N 530 SER CB OG sing N N 531 SER CB HB2 sing N N 532 SER CB HB3 sing N N 533 SER OG HG sing N N 534 SER OXT HXT sing N N 535 THR N CA sing N N 536 THR N H sing N N 537 THR N H2 sing N N 538 THR CA C sing N N 539 THR CA CB sing N N 540 THR CA HA sing N N 541 THR C O doub N N 542 THR C OXT sing N N 543 THR CB OG1 sing N N 544 THR CB CG2 sing N N 545 THR CB HB sing N N 546 THR OG1 HG1 sing N N 547 THR CG2 HG21 sing N N 548 THR CG2 HG22 sing N N 549 THR CG2 HG23 sing N N 550 THR OXT HXT sing N N 551 TRP N CA sing N N 552 TRP N H sing N N 553 TRP N H2 sing N N 554 TRP CA C sing N N 555 TRP CA CB sing N N 556 TRP CA HA sing N N 557 TRP C O doub N N 558 TRP C OXT sing N N 559 TRP CB CG sing N N 560 TRP CB HB2 sing N N 561 TRP CB HB3 sing N N 562 TRP CG CD1 doub Y N 563 TRP CG CD2 sing Y N 564 TRP CD1 NE1 sing Y N 565 TRP CD1 HD1 sing N N 566 TRP CD2 CE2 doub Y N 567 TRP CD2 CE3 sing Y N 568 TRP NE1 CE2 sing Y N 569 TRP NE1 HE1 sing N N 570 TRP CE2 CZ2 sing Y N 571 TRP CE3 CZ3 doub Y N 572 TRP CE3 HE3 sing N N 573 TRP CZ2 CH2 doub Y N 574 TRP CZ2 HZ2 sing N N 575 TRP CZ3 CH2 sing Y N 576 TRP CZ3 HZ3 sing N N 577 TRP CH2 HH2 sing N N 578 TRP OXT HXT sing N N 579 TYR N CA sing N N 580 TYR N H sing N N 581 TYR N H2 sing N N 582 TYR CA C sing N N 583 TYR CA CB sing N N 584 TYR CA HA sing N N 585 TYR C O doub N N 586 TYR C OXT sing N N 587 TYR CB CG sing N N 588 TYR CB HB2 sing N N 589 TYR CB HB3 sing N N 590 TYR CG CD1 doub Y N 591 TYR CG CD2 sing Y N 592 TYR CD1 CE1 sing Y N 593 TYR CD1 HD1 sing N N 594 TYR CD2 CE2 doub Y N 595 TYR CD2 HD2 sing N N 596 TYR CE1 CZ doub Y N 597 TYR CE1 HE1 sing N N 598 TYR CE2 CZ sing Y N 599 TYR CE2 HE2 sing N N 600 TYR CZ OH sing N N 601 TYR OH HH sing N N 602 TYR OXT HXT sing N N 603 VAL N CA sing N N 604 VAL N H sing N N 605 VAL N H2 sing N N 606 VAL CA C sing N N 607 VAL CA CB sing N N 608 VAL CA HA sing N N 609 VAL C O doub N N 610 VAL C OXT sing N N 611 VAL CB CG1 sing N N 612 VAL CB CG2 sing N N 613 VAL CB HB sing N N 614 VAL CG1 HG11 sing N N 615 VAL CG1 HG12 sing N N 616 VAL CG1 HG13 sing N N 617 VAL CG2 HG21 sing N N 618 VAL CG2 HG22 sing N N 619 VAL CG2 HG23 sing N N 620 VAL OXT HXT sing N N 621 # _ndb_struct_conf_na.entry_id 6LFF _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DG 1 1_555 D DC 12 1_555 -0.344 -0.094 0.074 -1.979 -9.242 -1.329 1 C_DG1:DC12_D C 1 ? D 12 ? 19 1 1 C C7R 2 1_555 D DG 11 1_555 0.260 -0.105 0.474 -2.095 -11.981 2.297 2 C_C7R2:DG11_D C 2 ? D 11 ? 19 1 1 C PST 3 1_555 D DA 10 1_555 -0.006 -0.195 0.134 2.103 -22.588 0.790 3 C_PST3:DA10_D C 3 ? D 10 ? 20 1 1 C DA 4 1_555 D DT 9 1_555 0.022 -0.061 -0.168 1.218 -10.177 -1.060 4 C_DA4:DT9_D C 4 ? D 9 ? 20 1 1 C DA 5 1_555 D PST 8 1_555 0.006 -0.140 0.120 3.549 -15.816 3.886 5 C_DA5:PST8_D C 5 ? D 8 ? 20 1 1 C DT 6 1_555 D AS 7 1_555 -0.254 -0.068 0.166 1.953 -14.087 6.088 6 C_DT6:AS7_D C 6 ? D 7 ? 20 1 1 C DA 7 1_555 D PST 6 1_555 0.012 -0.113 0.042 -6.463 -9.446 3.665 7 C_DA7:PST6_D C 7 ? D 6 ? 20 1 1 C DT 8 1_555 D AS 5 1_555 -0.063 -0.167 0.071 0.624 -13.355 3.313 8 C_DT8:AS5_D C 8 ? D 5 ? 20 1 1 C DA 9 1_555 D DT 4 1_555 0.031 -0.179 -0.086 -13.402 -12.183 0.781 9 C_DA9:DT4_D C 9 ? D 4 ? 20 1 1 C DT 10 1_555 D DA 3 1_555 0.162 -0.098 0.104 -9.971 -8.186 -1.205 10 C_DT10:DA3_D C 10 ? D 3 ? 20 1 1 C DG 11 1_555 D DC 2 1_555 -0.261 -0.132 0.032 16.459 -2.953 1.171 11 C_DG11:DC2_D C 11 ? D 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DG 1 1_555 D DC 12 1_555 C C7R 2 1_555 D DG 11 1_555 0.850 -0.196 3.262 -1.056 -0.640 36.346 -0.225 -1.509 3.240 -1.025 1.692 36.366 1 CC_DG1C7R2:DG11DC12_DD C 1 ? D 12 ? C 2 ? D 11 ? 1 C C7R 2 1_555 D DG 11 1_555 C PST 3 1_555 D DA 10 1_555 -0.744 0.036 3.121 2.555 1.555 34.171 -0.170 1.641 3.058 2.641 -4.337 34.297 2 CC_C7R2PST3:DA10DG11_DD C 2 ? D 11 ? C 3 ? D 10 ? 1 C PST 3 1_555 D DA 10 1_555 C DA 4 1_555 D DT 9 1_555 0.625 1.404 3.305 3.572 -2.897 42.290 2.230 -0.498 3.246 -4.002 -4.934 42.528 3 CC_PST3DA4:DT9DA10_DD C 3 ? D 10 ? C 4 ? D 9 ? 1 C DA 4 1_555 D DT 9 1_555 C DA 5 1_555 D PST 8 1_555 0.028 -0.093 3.156 -4.110 5.272 32.056 -1.041 -0.733 3.075 9.418 7.342 32.728 4 CC_DA4DA5:PST8DT9_DD C 4 ? D 9 ? C 5 ? D 8 ? 1 C DA 5 1_555 D PST 8 1_555 C DT 6 1_555 D AS 7 1_555 -0.033 -0.621 3.280 -0.356 2.120 29.806 -1.642 -0.009 3.230 4.116 0.691 29.881 5 CC_DA5DT6:AS7PST8_DD C 5 ? D 8 ? C 6 ? D 7 ? 1 C DT 6 1_555 D AS 7 1_555 C DA 7 1_555 D PST 6 1_555 -0.057 0.521 3.450 0.655 2.019 45.073 0.488 0.137 3.468 2.632 -0.854 45.121 6 CC_DT6DA7:PST6AS7_DD C 6 ? D 7 ? C 7 ? D 6 ? 1 C DA 7 1_555 D PST 6 1_555 C DT 8 1_555 D AS 5 1_555 0.225 -0.524 3.143 -0.845 0.843 32.837 -1.065 -0.536 3.123 1.491 1.494 32.858 7 CC_DA7DT8:AS5PST6_DD C 7 ? D 6 ? C 8 ? D 5 ? 1 C DT 8 1_555 D AS 5 1_555 C DA 9 1_555 D DT 4 1_555 -0.702 -0.696 3.486 0.183 6.327 35.240 -2.086 1.170 3.312 10.347 -0.299 35.787 8 CC_DT8DA9:DT4AS5_DD C 8 ? D 5 ? C 9 ? D 4 ? 1 C DA 9 1_555 D DT 4 1_555 C DT 10 1_555 D DA 3 1_555 -0.564 -0.447 3.205 -0.968 -0.767 35.278 -0.625 0.790 3.227 -1.266 1.597 35.299 9 CC_DA9DT10:DA3DT4_DD C 9 ? D 4 ? C 10 ? D 3 ? 1 C DT 10 1_555 D DA 3 1_555 C DG 11 1_555 D DC 2 1_555 0.213 0.647 2.892 -3.256 5.282 28.851 0.260 -1.042 2.920 10.448 6.440 29.497 10 CC_DT10DG11:DC2DA3_DD C 10 ? D 3 ? C 11 ? D 2 ? # _pdbx_audit_support.funding_organization 'Japan Society for the Promotion of Science (JSPS)' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number 24570144 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 AS ? ? AS ? ? 'SUBJECT OF INVESTIGATION' ? 2 C7R ? ? C7R ? ? 'SUBJECT OF INVESTIGATION' ? 3 PST ? ? PST ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2O4A _pdbx_initial_refinement_model.details ? # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'isothermal titration calorimetry' '1:1 binding stoichiometry for the protein and the double-stranded DNA was indicated in solution.' 2 2 none ? #