HEADER PEPTIDE BINDING PROTEIN 30-DEC-19 6LNG TITLE RAPID CRYSTALLIZATION OF STREPTAVIDIN USING CHARGED PEPTIDES COMPND MOL_ID: 1; COMPND 2 MOLECULE: STREPTAVIDIN; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: MIXTURE OF TWO KINDS OF PROTEINS, WHICH HAVE RRRRRRY COMPND 6 OR DDDDDDY ATTACHED AT C-TERMINAL RESPECTIVELY, WAS USED IN THIS COMPND 7 STUDY. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES AVIDINII; SOURCE 3 ORGANISM_TAXID: 1895; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS BIOTIN-BINDING PROTEIN, PEPTIDE BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.MINAMIHATA,K.TSUKAMOTO,M.ADACHI,R.SHIMIZU,M.MISHINA,R.KUROKI, AUTHOR 2 T.NAGAMUNE REVDAT 3 22-NOV-23 6LNG 1 REMARK REVDAT 2 15-APR-20 6LNG 1 JRNL REVDAT 1 18-MAR-20 6LNG 0 JRNL AUTH K.MINAMIHATA,K.TSUKAMOTO,M.ADACHI,R.SHIMIZU,M.MISHINA, JRNL AUTH 2 R.KUROKI,T.NAGAMUNE JRNL TITL GENETICALLY FUSED CHARGED PEPTIDES INDUCE RAPID JRNL TITL 2 CRYSTALLIZATION OF PROTEINS. JRNL REF CHEM.COMMUN.(CAMB.) V. 56 3891 2020 JRNL REFN ESSN 1364-548X JRNL PMID 32134050 JRNL DOI 10.1039/C9CC09529B REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.343 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 78085 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3904 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.0879 - 5.4603 0.98 2700 142 0.2203 0.2362 REMARK 3 2 5.4603 - 4.3361 1.00 2672 141 0.1666 0.1917 REMARK 3 3 4.3361 - 3.7886 0.99 2662 140 0.1673 0.1972 REMARK 3 4 3.7886 - 3.4425 1.00 2676 141 0.1740 0.1986 REMARK 3 5 3.4425 - 3.1959 1.00 2636 138 0.1728 0.2114 REMARK 3 6 3.1959 - 3.0076 1.00 2666 140 0.1754 0.2022 REMARK 3 7 3.0076 - 2.8570 1.00 2678 141 0.1809 0.2050 REMARK 3 8 2.8570 - 2.7327 1.00 2621 138 0.1738 0.2077 REMARK 3 9 2.7327 - 2.6275 1.00 2694 142 0.1816 0.2207 REMARK 3 10 2.6275 - 2.5369 1.00 2658 140 0.1828 0.2146 REMARK 3 11 2.5369 - 2.4575 1.00 2617 137 0.1771 0.2163 REMARK 3 12 2.4575 - 2.3873 1.00 2623 138 0.1889 0.2764 REMARK 3 13 2.3873 - 2.3245 1.00 2692 142 0.1896 0.2479 REMARK 3 14 2.3245 - 2.2678 1.00 2677 141 0.1834 0.2360 REMARK 3 15 2.2678 - 2.2162 1.00 2613 137 0.1746 0.2415 REMARK 3 16 2.2162 - 2.1691 1.00 2681 142 0.1683 0.2293 REMARK 3 17 2.1691 - 2.1257 1.00 2598 137 0.1645 0.1941 REMARK 3 18 2.1257 - 2.0856 1.00 2694 141 0.1688 0.2184 REMARK 3 19 2.0856 - 2.0483 1.00 2624 139 0.1752 0.2163 REMARK 3 20 2.0483 - 2.0136 1.00 2644 139 0.1731 0.1862 REMARK 3 21 2.0136 - 1.9811 1.00 2627 138 0.1775 0.2467 REMARK 3 22 1.9811 - 1.9507 1.00 2677 141 0.1826 0.2174 REMARK 3 23 1.9507 - 1.9220 1.00 2606 137 0.1892 0.2543 REMARK 3 24 1.9220 - 1.8949 1.00 2642 139 0.1926 0.2242 REMARK 3 25 1.8949 - 1.8693 1.00 2656 139 0.1995 0.2530 REMARK 3 26 1.8693 - 1.8450 1.00 2592 138 0.2084 0.2782 REMARK 3 27 1.8450 - 1.8220 1.00 2683 140 0.2280 0.2544 REMARK 3 28 1.8220 - 1.8000 0.99 2572 136 0.2494 0.2979 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.181 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.492 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.18 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5598 REMARK 3 ANGLE : 1.124 7656 REMARK 3 CHIRALITY : 0.048 852 REMARK 3 PLANARITY : 0.004 960 REMARK 3 DIHEDRAL : 14.740 1890 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6LNG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1300015112. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL38B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78148 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 37.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.670 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.39000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3RY1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 0.1 M MES PH REMARK 280 6.5, 30% W/V POLYETHYLENE GLYCOL MONOMETHYL ETHER 5000, BATCH REMARK 280 MODE, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 40.64650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.41450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 40.64650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 40.41450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -57.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -57.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 58.61011 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 130.69421 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH D 390 LIES ON A SPECIAL POSITION. REMARK 375 HOH E 319 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 137 REMARK 465 ALA A 138 REMARK 465 SER A 139 REMARK 465 ALA B 137 REMARK 465 ALA B 138 REMARK 465 SER B 139 REMARK 465 ALA C 137 REMARK 465 ALA C 138 REMARK 465 SER C 139 REMARK 465 ALA D 137 REMARK 465 ALA D 138 REMARK 465 SER D 139 REMARK 465 ALA E 137 REMARK 465 ALA E 138 REMARK 465 SER E 139 REMARK 465 ALA F 137 REMARK 465 ALA F 138 REMARK 465 SER F 139 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 101 CG CD OE1 OE2 REMARK 470 GLU B 101 CG CD OE1 OE2 REMARK 470 GLU C 101 CG CD OE1 OE2 REMARK 470 GLU D 101 CG CD OE1 OE2 REMARK 470 GLU E 101 CG CD OE1 OE2 REMARK 470 GLU F 101 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH F 361 O HOH F 398 1.58 REMARK 500 O ALA C 100 O HOH C 301 1.59 REMARK 500 O HOH F 398 O HOH F 406 1.67 REMARK 500 NZ LYS D 121 O HOH D 301 1.74 REMARK 500 NE2 GLN B 24 O HOH B 301 1.76 REMARK 500 O HOH A 355 O HOH B 397 1.79 REMARK 500 O HOH E 413 O HOH E 416 1.88 REMARK 500 NE2 GLN A 24 O HOH A 301 1.89 REMARK 500 O HOH A 418 O HOH D 413 1.90 REMARK 500 NH2 ARG B 84 O HOH B 302 1.96 REMARK 500 O HOH E 317 O HOH E 398 1.97 REMARK 500 O HOH F 401 O HOH F 405 1.98 REMARK 500 O HOH A 413 O HOH A 421 2.00 REMARK 500 O HOH A 381 O HOH A 416 2.00 REMARK 500 O HOH F 398 O HOH F 412 2.00 REMARK 500 O HOH A 306 O HOH A 381 2.00 REMARK 500 O HOH B 412 O HOH B 413 2.01 REMARK 500 O HOH E 342 O HOH E 391 2.03 REMARK 500 O HOH C 349 O HOH C 414 2.04 REMARK 500 O HOH E 371 O HOH E 410 2.05 REMARK 500 O HOH A 377 O HOH A 407 2.06 REMARK 500 O ALA D 46 O HOH D 302 2.06 REMARK 500 O HOH B 318 O HOH C 411 2.07 REMARK 500 O HOH C 369 O HOH C 416 2.07 REMARK 500 O HOH E 361 O HOH E 371 2.08 REMARK 500 O HOH A 395 O HOH A 412 2.08 REMARK 500 O HOH D 414 O HOH D 419 2.09 REMARK 500 O HOH F 387 O HOH F 394 2.09 REMARK 500 O HOH E 339 O HOH E 416 2.10 REMARK 500 O HOH C 326 O HOH D 395 2.10 REMARK 500 O HOH A 368 O HOH A 414 2.10 REMARK 500 O HOH C 359 O HOH C 394 2.11 REMARK 500 O HOH D 350 O HOH D 410 2.12 REMARK 500 O HOH B 348 O HOH B 350 2.12 REMARK 500 O HOH A 315 O HOH A 369 2.12 REMARK 500 O HOH B 348 O HOH B 404 2.13 REMARK 500 O HOH A 398 O HOH B 371 2.13 REMARK 500 O HOH A 402 O HOH B 400 2.13 REMARK 500 O ALA E 15 O HOH E 301 2.14 REMARK 500 O HOH E 361 O HOH E 410 2.14 REMARK 500 O HOH B 397 O HOH B 402 2.15 REMARK 500 NH1 ARG A 53 O HOH A 302 2.15 REMARK 500 O HOH C 327 O HOH D 401 2.15 REMARK 500 O HOH A 401 O HOH B 397 2.16 REMARK 500 O HOH E 404 O HOH F 403 2.16 REMARK 500 O HOH E 389 O HOH E 417 2.16 REMARK 500 O HOH A 311 O HOH A 320 2.17 REMARK 500 O HOH B 329 O HOH B 392 2.17 REMARK 500 O HOH E 407 O HOH E 413 2.17 REMARK 500 O HOH A 405 O HOH A 408 2.18 REMARK 500 REMARK 500 THIS ENTRY HAS 59 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP D 67 OD2 ASP D 67 2555 2.12 REMARK 500 O HOH B 320 O HOH C 301 3445 2.14 REMARK 500 O HOH E 392 O HOH F 359 2656 2.14 REMARK 500 O HOH E 394 O HOH F 339 2656 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 101 52.15 -108.31 REMARK 500 ALA B 46 -161.88 -107.57 REMARK 500 GLU B 101 56.36 -107.03 REMARK 500 ASN C 49 115.90 145.26 REMARK 500 GLU C 101 57.10 -119.88 REMARK 500 ALA D 46 -155.83 -117.05 REMARK 500 THR D 66 38.13 -94.47 REMARK 500 GLU D 101 58.00 -111.33 REMARK 500 GLU E 101 53.33 -106.38 REMARK 500 VAL F 47 -88.73 21.98 REMARK 500 GLU F 101 57.46 -109.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 413 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH E 420 DISTANCE = 7.24 ANGSTROMS REMARK 525 HOH E 421 DISTANCE = 9.77 ANGSTROMS REMARK 525 HOH F 415 DISTANCE = 7.33 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL E 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL F 201 DBREF 6LNG A 15 139 UNP P22629 SAV_STRAV 39 163 DBREF 6LNG B 15 139 UNP P22629 SAV_STRAV 39 163 DBREF 6LNG C 15 139 UNP P22629 SAV_STRAV 39 163 DBREF 6LNG D 15 139 UNP P22629 SAV_STRAV 39 163 DBREF 6LNG E 15 139 UNP P22629 SAV_STRAV 39 163 DBREF 6LNG F 15 139 UNP P22629 SAV_STRAV 39 163 SEQRES 1 A 125 ALA GLY ILE THR GLY THR TRP TYR ASN GLN LEU GLY SER SEQRES 2 A 125 THR PHE ILE VAL THR ALA GLY ALA ASP GLY ALA LEU THR SEQRES 3 A 125 GLY THR TYR GLU SER ALA VAL GLY ASN ALA GLU SER ARG SEQRES 4 A 125 TYR VAL LEU THR GLY ARG TYR ASP SER ALA PRO ALA THR SEQRES 5 A 125 ASP GLY SER GLY THR ALA LEU GLY TRP THR VAL ALA TRP SEQRES 6 A 125 LYS ASN ASN TYR ARG ASN ALA HIS SER ALA THR THR TRP SEQRES 7 A 125 SER GLY GLN TYR VAL GLY GLY ALA GLU ALA ARG ILE ASN SEQRES 8 A 125 THR GLN TRP LEU LEU THR SER GLY THR THR GLU ALA ASN SEQRES 9 A 125 ALA TRP LYS SER THR LEU VAL GLY HIS ASP THR PHE THR SEQRES 10 A 125 LYS VAL LYS PRO SER ALA ALA SER SEQRES 1 B 125 ALA GLY ILE THR GLY THR TRP TYR ASN GLN LEU GLY SER SEQRES 2 B 125 THR PHE ILE VAL THR ALA GLY ALA ASP GLY ALA LEU THR SEQRES 3 B 125 GLY THR TYR GLU SER ALA VAL GLY ASN ALA GLU SER ARG SEQRES 4 B 125 TYR VAL LEU THR GLY ARG TYR ASP SER ALA PRO ALA THR SEQRES 5 B 125 ASP GLY SER GLY THR ALA LEU GLY TRP THR VAL ALA TRP SEQRES 6 B 125 LYS ASN ASN TYR ARG ASN ALA HIS SER ALA THR THR TRP SEQRES 7 B 125 SER GLY GLN TYR VAL GLY GLY ALA GLU ALA ARG ILE ASN SEQRES 8 B 125 THR GLN TRP LEU LEU THR SER GLY THR THR GLU ALA ASN SEQRES 9 B 125 ALA TRP LYS SER THR LEU VAL GLY HIS ASP THR PHE THR SEQRES 10 B 125 LYS VAL LYS PRO SER ALA ALA SER SEQRES 1 C 125 ALA GLY ILE THR GLY THR TRP TYR ASN GLN LEU GLY SER SEQRES 2 C 125 THR PHE ILE VAL THR ALA GLY ALA ASP GLY ALA LEU THR SEQRES 3 C 125 GLY THR TYR GLU SER ALA VAL GLY ASN ALA GLU SER ARG SEQRES 4 C 125 TYR VAL LEU THR GLY ARG TYR ASP SER ALA PRO ALA THR SEQRES 5 C 125 ASP GLY SER GLY THR ALA LEU GLY TRP THR VAL ALA TRP SEQRES 6 C 125 LYS ASN ASN TYR ARG ASN ALA HIS SER ALA THR THR TRP SEQRES 7 C 125 SER GLY GLN TYR VAL GLY GLY ALA GLU ALA ARG ILE ASN SEQRES 8 C 125 THR GLN TRP LEU LEU THR SER GLY THR THR GLU ALA ASN SEQRES 9 C 125 ALA TRP LYS SER THR LEU VAL GLY HIS ASP THR PHE THR SEQRES 10 C 125 LYS VAL LYS PRO SER ALA ALA SER SEQRES 1 D 125 ALA GLY ILE THR GLY THR TRP TYR ASN GLN LEU GLY SER SEQRES 2 D 125 THR PHE ILE VAL THR ALA GLY ALA ASP GLY ALA LEU THR SEQRES 3 D 125 GLY THR TYR GLU SER ALA VAL GLY ASN ALA GLU SER ARG SEQRES 4 D 125 TYR VAL LEU THR GLY ARG TYR ASP SER ALA PRO ALA THR SEQRES 5 D 125 ASP GLY SER GLY THR ALA LEU GLY TRP THR VAL ALA TRP SEQRES 6 D 125 LYS ASN ASN TYR ARG ASN ALA HIS SER ALA THR THR TRP SEQRES 7 D 125 SER GLY GLN TYR VAL GLY GLY ALA GLU ALA ARG ILE ASN SEQRES 8 D 125 THR GLN TRP LEU LEU THR SER GLY THR THR GLU ALA ASN SEQRES 9 D 125 ALA TRP LYS SER THR LEU VAL GLY HIS ASP THR PHE THR SEQRES 10 D 125 LYS VAL LYS PRO SER ALA ALA SER SEQRES 1 E 125 ALA GLY ILE THR GLY THR TRP TYR ASN GLN LEU GLY SER SEQRES 2 E 125 THR PHE ILE VAL THR ALA GLY ALA ASP GLY ALA LEU THR SEQRES 3 E 125 GLY THR TYR GLU SER ALA VAL GLY ASN ALA GLU SER ARG SEQRES 4 E 125 TYR VAL LEU THR GLY ARG TYR ASP SER ALA PRO ALA THR SEQRES 5 E 125 ASP GLY SER GLY THR ALA LEU GLY TRP THR VAL ALA TRP SEQRES 6 E 125 LYS ASN ASN TYR ARG ASN ALA HIS SER ALA THR THR TRP SEQRES 7 E 125 SER GLY GLN TYR VAL GLY GLY ALA GLU ALA ARG ILE ASN SEQRES 8 E 125 THR GLN TRP LEU LEU THR SER GLY THR THR GLU ALA ASN SEQRES 9 E 125 ALA TRP LYS SER THR LEU VAL GLY HIS ASP THR PHE THR SEQRES 10 E 125 LYS VAL LYS PRO SER ALA ALA SER SEQRES 1 F 125 ALA GLY ILE THR GLY THR TRP TYR ASN GLN LEU GLY SER SEQRES 2 F 125 THR PHE ILE VAL THR ALA GLY ALA ASP GLY ALA LEU THR SEQRES 3 F 125 GLY THR TYR GLU SER ALA VAL GLY ASN ALA GLU SER ARG SEQRES 4 F 125 TYR VAL LEU THR GLY ARG TYR ASP SER ALA PRO ALA THR SEQRES 5 F 125 ASP GLY SER GLY THR ALA LEU GLY TRP THR VAL ALA TRP SEQRES 6 F 125 LYS ASN ASN TYR ARG ASN ALA HIS SER ALA THR THR TRP SEQRES 7 F 125 SER GLY GLN TYR VAL GLY GLY ALA GLU ALA ARG ILE ASN SEQRES 8 F 125 THR GLN TRP LEU LEU THR SER GLY THR THR GLU ALA ASN SEQRES 9 F 125 ALA TRP LYS SER THR LEU VAL GLY HIS ASP THR PHE THR SEQRES 10 F 125 LYS VAL LYS PRO SER ALA ALA SER HET GOL A 201 6 HET GOL B 201 6 HET GOL C 201 6 HET GOL D 201 6 HET GOL E 201 6 HET GOL F 201 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 7 GOL 6(C3 H8 O3) FORMUL 13 HOH *712(H2 O) HELIX 1 AA1 ASN A 49 GLU A 51 5 3 HELIX 2 AA2 ASN A 118 LYS A 121 5 4 HELIX 3 AA3 ASN B 49 GLU B 51 5 3 HELIX 4 AA4 THR B 115 LYS B 121 5 7 HELIX 5 AA5 ASN C 49 GLU C 51 5 3 HELIX 6 AA6 THR C 115 LYS C 121 5 7 HELIX 7 AA7 ASN D 49 GLU D 51 5 3 HELIX 8 AA8 THR D 115 LYS D 121 5 7 HELIX 9 AA9 ASN E 49 GLU E 51 5 3 HELIX 10 AB1 THR E 115 LYS E 121 5 7 HELIX 11 AB2 ASN F 49 GLU F 51 5 3 HELIX 12 AB3 THR F 115 LYS F 121 5 7 SHEET 1 AA1 9 GLY A 19 TYR A 22 0 SHEET 2 AA1 9 THR A 28 ALA A 33 -1 O PHE A 29 N TRP A 21 SHEET 3 AA1 9 ALA A 38 GLU A 44 -1 O GLU A 44 N THR A 28 SHEET 4 AA1 9 ARG A 53 TYR A 60 -1 O TYR A 54 N TYR A 43 SHEET 5 AA1 9 THR A 71 LYS A 80 -1 O THR A 76 N THR A 57 SHEET 6 AA1 9 ASN A 85 VAL A 97 -1 O TRP A 92 N TRP A 75 SHEET 7 AA1 9 ARG A 103 SER A 112 -1 O GLN A 107 N SER A 93 SHEET 8 AA1 9 THR A 123 THR A 131 -1 O PHE A 130 N ILE A 104 SHEET 9 AA1 9 GLY A 19 TYR A 22 -1 N TYR A 22 O THR A 131 SHEET 1 AA2 9 GLY B 19 TYR B 22 0 SHEET 2 AA2 9 THR B 28 ALA B 33 -1 O PHE B 29 N TRP B 21 SHEET 3 AA2 9 ALA B 38 GLU B 44 -1 O GLU B 44 N THR B 28 SHEET 4 AA2 9 ARG B 53 TYR B 60 -1 O TYR B 54 N TYR B 43 SHEET 5 AA2 9 THR B 71 LYS B 80 -1 O THR B 76 N THR B 57 SHEET 6 AA2 9 ASN B 85 VAL B 97 -1 O TYR B 96 N THR B 71 SHEET 7 AA2 9 ARG B 103 SER B 112 -1 O ARG B 103 N VAL B 97 SHEET 8 AA2 9 THR B 123 THR B 131 -1 O LEU B 124 N LEU B 110 SHEET 9 AA2 9 GLY B 19 TYR B 22 -1 N TYR B 22 O THR B 131 SHEET 1 AA3 9 GLY C 19 TYR C 22 0 SHEET 2 AA3 9 THR C 28 ALA C 33 -1 O PHE C 29 N TRP C 21 SHEET 3 AA3 9 ALA C 38 GLU C 44 -1 O GLU C 44 N THR C 28 SHEET 4 AA3 9 ARG C 53 TYR C 60 -1 O TYR C 54 N TYR C 43 SHEET 5 AA3 9 THR C 71 LYS C 80 -1 O THR C 76 N THR C 57 SHEET 6 AA3 9 ASN C 85 VAL C 97 -1 O ALA C 86 N TRP C 79 SHEET 7 AA3 9 ARG C 103 SER C 112 -1 O ARG C 103 N VAL C 97 SHEET 8 AA3 9 THR C 123 THR C 131 -1 O GLY C 126 N TRP C 108 SHEET 9 AA3 9 GLY C 19 TYR C 22 -1 N TYR C 22 O THR C 131 SHEET 1 AA4 9 GLY D 19 TYR D 22 0 SHEET 2 AA4 9 THR D 28 ALA D 33 -1 O PHE D 29 N TRP D 21 SHEET 3 AA4 9 ALA D 38 GLU D 44 -1 O GLU D 44 N THR D 28 SHEET 4 AA4 9 ARG D 53 TYR D 60 -1 O TYR D 54 N TYR D 43 SHEET 5 AA4 9 THR D 71 LYS D 80 -1 O THR D 76 N THR D 57 SHEET 6 AA4 9 ASN D 85 VAL D 97 -1 O TRP D 92 N TRP D 75 SHEET 7 AA4 9 ARG D 103 SER D 112 -1 O ARG D 103 N VAL D 97 SHEET 8 AA4 9 THR D 123 THR D 131 -1 O GLY D 126 N TRP D 108 SHEET 9 AA4 9 GLY D 19 TYR D 22 -1 N TYR D 22 O THR D 131 SHEET 1 AA5 9 GLY E 19 TYR E 22 0 SHEET 2 AA5 9 THR E 28 ALA E 33 -1 O PHE E 29 N TRP E 21 SHEET 3 AA5 9 ALA E 38 GLU E 44 -1 O GLU E 44 N THR E 28 SHEET 4 AA5 9 ARG E 53 TYR E 60 -1 O TYR E 54 N TYR E 43 SHEET 5 AA5 9 THR E 71 LYS E 80 -1 O THR E 76 N THR E 57 SHEET 6 AA5 9 ASN E 85 VAL E 97 -1 O TYR E 96 N THR E 71 SHEET 7 AA5 9 ARG E 103 SER E 112 -1 O GLN E 107 N SER E 93 SHEET 8 AA5 9 THR E 123 THR E 131 -1 O PHE E 130 N ILE E 104 SHEET 9 AA5 9 GLY E 19 TYR E 22 -1 N TYR E 22 O THR E 131 SHEET 1 AA6 9 GLY F 19 TYR F 22 0 SHEET 2 AA6 9 THR F 28 ALA F 33 -1 O PHE F 29 N TRP F 21 SHEET 3 AA6 9 ALA F 38 GLU F 44 -1 O GLU F 44 N THR F 28 SHEET 4 AA6 9 ARG F 53 TYR F 60 -1 O TYR F 54 N TYR F 43 SHEET 5 AA6 9 THR F 71 LYS F 80 -1 O THR F 76 N THR F 57 SHEET 6 AA6 9 ASN F 85 VAL F 97 -1 O TYR F 96 N THR F 71 SHEET 7 AA6 9 ARG F 103 SER F 112 -1 O ARG F 103 N VAL F 97 SHEET 8 AA6 9 THR F 123 THR F 131 -1 O PHE F 130 N ILE F 104 SHEET 9 AA6 9 GLY F 19 TYR F 22 -1 N TYR F 22 O THR F 131 SITE 1 AC1 7 TRP A 79 THR A 90 TRP A 92 TRP A 108 SITE 2 AC1 7 ASP A 128 HOH A 313 HOH A 377 SITE 1 AC2 8 TRP B 79 THR B 90 TRP B 92 ASP B 128 SITE 2 AC2 8 HOH B 311 HOH B 318 HOH B 328 HOH B 364 SITE 1 AC3 8 TRP C 79 THR C 90 TRP C 92 TRP C 108 SITE 2 AC3 8 ASP C 128 HOH C 310 HOH C 337 HOH C 362 SITE 1 AC4 9 TRP D 79 THR D 90 TRP D 92 TRP D 108 SITE 2 AC4 9 ASP D 128 HOH D 312 HOH D 343 HOH D 379 SITE 3 AC4 9 HOH D 382 SITE 1 AC5 7 THR E 90 TRP E 92 TRP E 108 ASP E 128 SITE 2 AC5 7 HOH E 311 HOH E 346 HOH E 375 SITE 1 AC6 6 THR F 90 TRP F 108 ASP F 128 HOH F 306 SITE 2 AC6 6 HOH F 353 HOH F 377 CRYST1 81.293 80.829 132.648 90.00 99.85 90.00 C 1 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012301 0.000000 0.002135 0.00000 SCALE2 0.000000 0.012372 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007651 0.00000