HEADER LYASE 16-JAN-20 6LRP TITLE CRYSTAL STRUCTURE OF ISOCITRATE LYASE (CAUR_3889) FROM CHLOROFLEXUS TITLE 2 AURANTIACUS IN COMPLEX WITH MANGANESE ION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOCITRATE LYASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHLOROFLEXUS AURANTIACUS (STRAIN ATCC 29366 / SOURCE 3 DSM 635 / J-10-FL); SOURCE 4 ORGANISM_TAXID: 324602; SOURCE 5 GENE: CAUR_3889; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ISOCITRATE LYASE, MANGANESE ION, TIM-BARREL, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR S.H.LEE,K.J.KIM REVDAT 2 29-NOV-23 6LRP 1 REMARK REVDAT 1 28-JUL-21 6LRP 0 JRNL AUTH S.H.LEE,K.J.KIM JRNL TITL STRUCTURAL STUDIES REVEAL THE MOLECULAR MECHANISM OF JRNL TITL 2 ISOCITRATE LYASE FROM CHLOROFLEXUS AURANTIACUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 27556 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1401 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1932 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.3130 REMARK 3 BIN FREE R VALUE SET COUNT : 94 REMARK 3 BIN FREE R VALUE : 0.3500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3030 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 23 REMARK 3 SOLVENT ATOMS : 249 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.68000 REMARK 3 B22 (A**2) : 0.68000 REMARK 3 B33 (A**2) : -1.35000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.177 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.163 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.129 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.134 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3119 ; 0.008 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2837 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4221 ; 1.496 ; 1.642 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6540 ; 1.376 ; 1.569 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 389 ; 6.880 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 181 ;33.269 ;21.547 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 483 ;15.958 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;16.441 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 395 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3586 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 712 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6LRP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1300014204. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28958 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.30900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3E5B REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8% PEG 8000, 0.2M TRIS-HCL PH 8.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 46.38600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 46.38600 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 108.05700 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 46.38600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 54.02850 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 46.38600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 162.08550 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 46.38600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 162.08550 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.38600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 54.02850 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 46.38600 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 46.38600 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 108.05700 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 46.38600 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 46.38600 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 108.05700 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 46.38600 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 162.08550 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 46.38600 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 54.02850 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 46.38600 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 54.02850 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 46.38600 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 162.08550 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 46.38600 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 46.38600 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 108.05700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 31080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -153.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 -46.38600 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 46.38600 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 108.05700 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 -92.77200 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 -46.38600 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 -46.38600 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 108.05700 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 ARG A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 ARG A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 GLN A 6 REMARK 465 ILE A 7 REMARK 465 LYS A 8 REMARK 465 GLN A 9 REMARK 465 ILE A 10 REMARK 465 ALA A 11 REMARK 465 ASP A 12 REMARK 465 SER A 13 REMARK 465 TRP A 14 REMARK 465 ASN A 15 REMARK 465 THR A 16 REMARK 465 PRO A 17 REMARK 465 ARG A 18 REMARK 465 PHE A 19 REMARK 465 SER A 410 REMARK 465 THR A 411 REMARK 465 THR A 412 REMARK 465 ALA A 413 REMARK 465 LEU A 414 REMARK 465 THR A 415 REMARK 465 GLY A 416 REMARK 465 SER A 417 REMARK 465 THR A 418 REMARK 465 GLU A 419 REMARK 465 GLU A 420 REMARK 465 GLU A 421 REMARK 465 GLN A 422 REMARK 465 PHE A 423 REMARK 465 HIS A 424 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 628 O HOH A 775 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 25 43.08 -76.65 REMARK 500 ASP A 94 2.71 -155.66 REMARK 500 ALA A 95 54.92 -150.05 REMARK 500 GLU A 150 -135.06 58.38 REMARK 500 PRO A 217 46.99 -78.55 REMARK 500 GLU A 283 134.01 178.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 854 DISTANCE = 5.92 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P3G A 502 DBREF 6LRP A 1 424 UNP A9WDE7 A9WDE7_CHLAA 1 424 SEQADV 6LRP MET A -11 UNP A9WDE7 INITIATING METHIONINE SEQADV 6LRP ARG A -10 UNP A9WDE7 EXPRESSION TAG SEQADV 6LRP GLY A -9 UNP A9WDE7 EXPRESSION TAG SEQADV 6LRP SER A -8 UNP A9WDE7 EXPRESSION TAG SEQADV 6LRP HIS A -7 UNP A9WDE7 EXPRESSION TAG SEQADV 6LRP HIS A -6 UNP A9WDE7 EXPRESSION TAG SEQADV 6LRP HIS A -5 UNP A9WDE7 EXPRESSION TAG SEQADV 6LRP HIS A -4 UNP A9WDE7 EXPRESSION TAG SEQADV 6LRP HIS A -3 UNP A9WDE7 EXPRESSION TAG SEQADV 6LRP HIS A -2 UNP A9WDE7 EXPRESSION TAG SEQADV 6LRP GLY A -1 UNP A9WDE7 EXPRESSION TAG SEQADV 6LRP SER A 0 UNP A9WDE7 EXPRESSION TAG SEQRES 1 A 436 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER MET SEQRES 2 A 436 ASP ARG ALA ALA GLN ILE LYS GLN ILE ALA ASP SER TRP SEQRES 3 A 436 ASN THR PRO ARG PHE ALA GLY ILE VAL ARG PRO TYR THR SEQRES 4 A 436 PRO GLU ASP VAL TYR ARG LEU ARG GLY SER VAL GLN ILE SEQRES 5 A 436 GLU TYR THR LEU ALA ARG MET GLY ALA GLU ARG LEU TRP SEQRES 6 A 436 ASN LEU LEU HIS THR GLU PRO TYR ILE ASN ALA LEU GLY SEQRES 7 A 436 ALA LEU THR GLY ASN GLN ALA MET GLN GLN VAL LYS ALA SEQRES 8 A 436 GLY LEU LYS ALA ILE TYR LEU SER GLY TRP GLN VAL ALA SEQRES 9 A 436 ALA ASP ALA ASN LEU ALA GLY GLN MET TYR PRO ASP GLN SEQRES 10 A 436 SER LEU TYR PRO ALA ASN SER GLY PRO GLN LEU VAL ARG SEQRES 11 A 436 ASN ILE ASN ASN ALA LEU ARG ARG ALA ASP GLN ILE TYR SEQRES 12 A 436 HIS SER GLU GLY ARG ASN ASP ILE TYR TRP PHE ALA PRO SEQRES 13 A 436 ILE VAL ALA ASP ALA GLU ALA GLY PHE GLY GLY PRO LEU SEQRES 14 A 436 ASN VAL PHE GLU ILE MET LYS ALA TYR ILE GLU ALA GLY SEQRES 15 A 436 ALA ALA GLY VAL HIS PHE GLU ASP GLN LEU ALA SER GLU SEQRES 16 A 436 LYS LYS CYS GLY HIS MET GLY GLY LYS VAL LEU ILE PRO SEQRES 17 A 436 THR GLN ALA ALA ILE ARG ASN LEU VAL ALA ALA ARG LEU SEQRES 18 A 436 ALA ALA ASP VAL MET GLY VAL PRO THR ILE ILE VAL ALA SEQRES 19 A 436 ARG THR ASP ALA ASN ALA ALA THR LEU LEU THR SER ASP SEQRES 20 A 436 ILE ASP GLU ARG ASP ARG PRO PHE CYS THR GLY GLU ARG SEQRES 21 A 436 THR SER GLU GLY PHE TYR ARG VAL ARG ALA GLY LEU ASP SEQRES 22 A 436 GLN ALA ILE ALA ARG GLY LEU ALA TYR ALA PRO TYR ALA SEQRES 23 A 436 ASP MET ILE TRP CYS GLU THR SER GLU PRO ASN LEU GLU SEQRES 24 A 436 GLU ALA ARG ARG PHE ALA GLU ALA ILE HIS ALA GLN PHE SEQRES 25 A 436 PRO GLY LYS LEU LEU ALA TYR ASN CYS SER PRO SER PHE SEQRES 26 A 436 ASN TRP LYS LYS LYS LEU ASP ASP ALA THR ILE ALA ALA SEQRES 27 A 436 PHE GLN ARG GLU LEU GLY ALA MET GLY TYR LYS PHE GLN SEQRES 28 A 436 PHE VAL THR LEU ALA GLY PHE HIS ALA LEU ASN TYR SER SEQRES 29 A 436 MET PHE GLU LEU ALA ARG ASN TYR ARG ASP ARG GLY MET SEQRES 30 A 436 ALA ALA TYR SER GLU LEU GLN GLN ALA GLU PHE ALA ALA SEQRES 31 A 436 GLU ALA TYR GLY TYR THR ALA THR ARG HIS GLN ARG GLU SEQRES 32 A 436 VAL GLY THR GLY TYR PHE ASP GLU VAL ALA GLN VAL ILE SEQRES 33 A 436 ALA GLY GLY GLU ILE SER THR THR ALA LEU THR GLY SER SEQRES 34 A 436 THR GLU GLU GLU GLN PHE HIS HET GOL A 501 6 HET P3G A 502 17 HETNAM GOL GLYCEROL HETNAM P3G 3,6,9,12,15-PENTAOXAHEPTADECANE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 P3G C12 H26 O5 FORMUL 4 HOH *249(H2 O) HELIX 1 AA1 THR A 27 ARG A 35 1 9 HELIX 2 AA2 TYR A 42 GLU A 59 1 18 HELIX 3 AA3 THR A 69 ALA A 79 1 11 HELIX 4 AA4 SER A 87 ALA A 95 1 9 HELIX 5 AA5 ASN A 111 GLU A 134 1 24 HELIX 6 AA6 GLY A 155 GLY A 170 1 16 HELIX 7 AA7 LEU A 180 LYS A 184 5 5 HELIX 8 AA8 PRO A 196 GLY A 215 1 20 HELIX 9 AA9 ASP A 240 PRO A 242 5 3 HELIX 10 AB1 GLY A 259 ALA A 271 1 13 HELIX 11 AB2 PRO A 272 ALA A 274 5 3 HELIX 12 AB3 ASN A 285 PHE A 300 1 16 HELIX 13 AB4 ASN A 314 LEU A 319 1 6 HELIX 14 AB5 ASP A 320 GLY A 335 1 16 HELIX 15 AB6 LEU A 343 GLY A 364 1 22 HELIX 16 AB7 GLY A 364 GLU A 379 1 16 HELIX 17 AB8 ALA A 380 GLY A 382 5 3 HELIX 18 AB9 ARG A 387 VAL A 392 1 6 HELIX 19 AC1 GLY A 393 GLY A 407 1 15 SHEET 1 AA1 8 ILE A 62 LEU A 65 0 SHEET 2 AA1 8 TYR A 336 VAL A 341 1 O LYS A 337 N ILE A 62 SHEET 3 AA1 8 LEU A 304 ASN A 308 1 N TYR A 307 O PHE A 338 SHEET 4 AA1 8 MET A 276 CYS A 279 1 N ILE A 277 O ALA A 306 SHEET 5 AA1 8 ILE A 219 THR A 224 1 N THR A 224 O TRP A 278 SHEET 6 AA1 8 GLY A 173 GLU A 177 1 N PHE A 176 O ARG A 223 SHEET 7 AA1 8 ILE A 145 ASP A 148 1 N ALA A 147 O HIS A 175 SHEET 8 AA1 8 ILE A 84 LEU A 86 1 N ILE A 84 O VAL A 146 SHEET 1 AA2 4 VAL A 193 LEU A 194 0 SHEET 2 AA2 4 LEU A 231 LEU A 232 1 O LEU A 231 N LEU A 194 SHEET 3 AA2 4 TYR A 254 VAL A 256 -1 O TYR A 254 N LEU A 232 SHEET 4 AA2 4 CYS A 244 ARG A 248 -1 N THR A 245 O ARG A 255 CISPEP 1 ALA A 20 GLY A 21 0 -11.51 SITE 1 AC1 3 TYR A 351 HOH A 638 HOH A 687 SITE 1 AC2 6 GLU A 59 GLY A 302 LEU A 304 ALA A 333 SITE 2 AC2 6 GLY A 335 LYS A 337 CRYST1 92.772 92.772 216.114 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010779 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010779 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004627 0.00000