HEADER METAL BINDING PROTEIN 16-JAN-20 6LRW TITLE MARSUPENAEUS JAPONICUS FERRITIN MUTANT(T158H) PH 7.0 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERRITIN; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.16.3.1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PENAEUS JAPONICUS; SOURCE 3 ORGANISM_COMMON: KURUMA PRAWN; SOURCE 4 ORGANISM_TAXID: 27405; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS FERROXIDASE, IRON, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.ZHAO,X.TAN,T.ZHANG REVDAT 2 29-NOV-23 6LRW 1 REMARK REVDAT 1 23-DEC-20 6LRW 0 JRNL AUTH X.TAN,H.CHEN,C.GU,J.ZHANG,T.ZHANG,H.WANG,G.ZHAO JRNL TITL CONVERTING HISTIDINE-INDUCED 3D PROTEIN ARRAYS IN CRYSTALS JRNL TITL 2 INTO THEIR 3D ANALOGUES IN SOLUTION BY METAL COORDINATION JRNL TITL 3 CROSS-LINKING. JRNL REF COMMUN CHEM 2020 JRNL REFN ESSN 2399-3669 JRNL DOI 10.1038/S42004-020-00394-X REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 20089 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.300 REMARK 3 FREE R VALUE TEST SET COUNT : 1118 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1471 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2140 REMARK 3 BIN FREE R VALUE SET COUNT : 74 REMARK 3 BIN FREE R VALUE : 0.2840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2724 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 94 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.243 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.209 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.141 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.233 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2774 ; 0.017 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2586 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3730 ; 1.755 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5970 ; 1.009 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 336 ; 5.457 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 150 ;39.745 ;25.600 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 512 ;17.383 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;22.272 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 390 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3192 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 640 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6LRW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1300015328. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JAN-19 REMARK 200 TEMPERATURE (KELVIN) : 273.15 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21207 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 117.110 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 19.10 REMARK 200 R MERGE (I) : 0.14200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 17.50 REMARK 200 R MERGE FOR SHELL (I) : 0.48200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 6A4U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2500 MM NACL, 100 MM KH2PO3 / KH2PO3 REMARK 280 (PH 7.0), VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 24-MERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 24-MERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 91070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 132290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -266.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 8 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 9 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 9 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 9 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 10 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 11 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 12 1.000000 0.000000 0.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 203 O HOH A 231 0.87 REMARK 500 O HOH B 247 O HOH B 249 1.61 REMARK 500 OE1 GLU A 24 OE1 GLU A 59 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 24 CD GLU A 24 OE1 0.089 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 24 CG - CD - OE1 ANGL. DEV. = 12.3 DEGREES REMARK 500 ARG A 60 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 76 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 154 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B 76 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 43 -65.52 -125.51 REMARK 500 TYR A 134 -59.17 -125.15 REMARK 500 VAL B 43 -64.00 -122.10 REMARK 500 TYR B 134 -59.58 -121.76 REMARK 500 REMARK 500 REMARK: NULL DBREF 6LRW A 1 170 UNP T2B7E1 T2B7E1_PENJP 1 170 DBREF 6LRW B 1 170 UNP T2B7E1 T2B7E1_PENJP 1 170 SEQADV 6LRW HIS A 158 UNP T2B7E1 THR 158 ENGINEERED MUTATION SEQADV 6LRW HIS B 158 UNP T2B7E1 THR 158 ENGINEERED MUTATION SEQRES 1 A 170 MET ALA SER GLN VAL ARG GLN ASN TYR HIS GLU ASP CYS SEQRES 2 A 170 GLU ALA SER ILE ASN LYS GLN ILE ASN MET GLU LEU TYR SEQRES 3 A 170 ALA SER TYR VAL TYR LEU SER MET ALA TYR TYR PHE GLU SEQRES 4 A 170 ARG ASP ASP VAL ALA LEU PRO GLY PHE ALA LYS PHE PHE SEQRES 5 A 170 LYS GLU SER SER ASP GLU GLU ARG GLU HIS ALA GLN THR SEQRES 6 A 170 PHE MET LYS TYR GLN ASN LYS ARG GLY GLY ARG ILE VAL SEQRES 7 A 170 LEU GLN GLN ILE ALA ALA PRO SER MET GLN GLU TRP GLY SEQRES 8 A 170 THR GLY LEU GLU ALA LEU GLN ALA ALA LEU ASP LEU GLU SEQRES 9 A 170 LYS GLN VAL ASN GLN SER LEU LEU GLU LEU HIS SER THR SEQRES 10 A 170 ALA SER GLY ASN ASN ASP PRO HIS LEU THR LYS LEU LEU SEQRES 11 A 170 GLU ASP GLU TYR LEU GLU GLU GLN VAL ASP SER ILE LYS SEQRES 12 A 170 LYS ILE GLY ASP MET ILE THR LYS LEU LYS ARG ALA GLY SEQRES 13 A 170 PRO HIS GLY LEU GLY GLU TYR MET PHE ASP LYS GLU LEU SEQRES 14 A 170 ASN SEQRES 1 B 170 MET ALA SER GLN VAL ARG GLN ASN TYR HIS GLU ASP CYS SEQRES 2 B 170 GLU ALA SER ILE ASN LYS GLN ILE ASN MET GLU LEU TYR SEQRES 3 B 170 ALA SER TYR VAL TYR LEU SER MET ALA TYR TYR PHE GLU SEQRES 4 B 170 ARG ASP ASP VAL ALA LEU PRO GLY PHE ALA LYS PHE PHE SEQRES 5 B 170 LYS GLU SER SER ASP GLU GLU ARG GLU HIS ALA GLN THR SEQRES 6 B 170 PHE MET LYS TYR GLN ASN LYS ARG GLY GLY ARG ILE VAL SEQRES 7 B 170 LEU GLN GLN ILE ALA ALA PRO SER MET GLN GLU TRP GLY SEQRES 8 B 170 THR GLY LEU GLU ALA LEU GLN ALA ALA LEU ASP LEU GLU SEQRES 9 B 170 LYS GLN VAL ASN GLN SER LEU LEU GLU LEU HIS SER THR SEQRES 10 B 170 ALA SER GLY ASN ASN ASP PRO HIS LEU THR LYS LEU LEU SEQRES 11 B 170 GLU ASP GLU TYR LEU GLU GLU GLN VAL ASP SER ILE LYS SEQRES 12 B 170 LYS ILE GLY ASP MET ILE THR LYS LEU LYS ARG ALA GLY SEQRES 13 B 170 PRO HIS GLY LEU GLY GLU TYR MET PHE ASP LYS GLU LEU SEQRES 14 B 170 ASN FORMUL 3 HOH *94(H2 O) HELIX 1 AA1 HIS A 10 PHE A 38 1 29 HELIX 2 AA2 LEU A 45 ARG A 73 1 29 HELIX 3 AA3 THR A 92 ASN A 121 1 30 HELIX 4 AA4 ASP A 123 TYR A 134 1 12 HELIX 5 AA5 TYR A 134 GLY A 156 1 23 HELIX 6 AA6 GLY A 159 ASN A 170 1 12 HELIX 7 AA7 HIS B 10 PHE B 38 1 29 HELIX 8 AA8 LEU B 45 GLY B 74 1 30 HELIX 9 AA9 THR B 92 ASN B 121 1 30 HELIX 10 AB1 ASP B 123 TYR B 134 1 12 HELIX 11 AB2 TYR B 134 GLY B 156 1 23 HELIX 12 AB3 GLY B 159 ASN B 170 1 12 CISPEP 1 GLY A 156 PRO A 157 0 14.15 CISPEP 2 GLY B 156 PRO B 157 0 11.87 CRYST1 117.114 117.114 117.114 90.00 90.00 90.00 P 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008539 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008539 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008539 0.00000 TER 1363 ASN A 170 TER 2726 ASN B 170 HETATM 2727 O HOH A 201 16.208 -51.241 29.071 1.00 16.01 O HETATM 2728 O HOH A 202 26.238 -46.613 38.488 1.00 19.48 O HETATM 2729 O HOH A 203 21.212 -41.135 40.082 1.00 24.70 O HETATM 2730 O HOH A 204 14.097 -49.397 31.979 1.00 14.48 O HETATM 2731 O HOH A 205 8.193 -28.776 49.713 1.00 23.05 O HETATM 2732 O HOH A 206 14.212 -46.097 21.874 1.00 18.54 O HETATM 2733 O HOH A 207 -15.610 -18.935 51.580 1.00 17.30 O HETATM 2734 O HOH A 208 -10.553 -22.642 39.979 1.00 16.59 O HETATM 2735 O HOH A 209 12.524 -9.210 52.632 1.00 17.09 O HETATM 2736 O HOH A 210 17.974 -50.066 34.100 1.00 27.82 O HETATM 2737 O HOH A 211 9.132 -43.132 35.934 1.00 13.73 O HETATM 2738 O HOH A 212 19.116 -38.847 41.306 1.00 15.85 O HETATM 2739 O HOH A 213 -6.488 -37.037 42.501 1.00 13.27 O HETATM 2740 O HOH A 214 10.473 -46.413 26.503 1.00 13.15 O HETATM 2741 O HOH A 215 22.386 -44.847 23.837 1.00 10.42 O HETATM 2742 O HOH A 216 -14.516 -21.197 52.480 1.00 18.66 O HETATM 2743 O HOH A 217 1.731 -14.740 52.147 1.00 21.85 O HETATM 2744 O HOH A 218 11.918 -29.812 29.402 1.00 23.37 O HETATM 2745 O HOH A 219 3.044 -17.135 56.244 1.00 17.39 O HETATM 2746 O HOH A 220 -7.074 -16.865 41.899 1.00 23.17 O HETATM 2747 O HOH A 221 -3.481 -31.680 47.186 1.00 19.33 O HETATM 2748 O HOH A 222 20.618 -42.831 19.820 1.00 13.28 O HETATM 2749 O HOH A 223 -5.879 -27.902 44.759 1.00 15.40 O HETATM 2750 O HOH A 224 27.715 -41.041 26.402 1.00 15.14 O HETATM 2751 O HOH A 225 25.245 -44.100 31.098 1.00 16.98 O HETATM 2752 O HOH A 226 21.520 -20.933 35.988 1.00 26.06 O HETATM 2753 O HOH A 227 5.457 -39.904 43.396 1.00 15.28 O HETATM 2754 O HOH A 228 28.081 -49.445 24.627 1.00 20.24 O HETATM 2755 O HOH A 229 -5.773 -11.209 46.098 1.00 13.93 O HETATM 2756 O HOH A 230 13.345 -39.884 21.556 1.00 17.21 O HETATM 2757 O HOH A 231 21.525 -40.996 40.884 1.00 20.51 O HETATM 2758 O HOH A 232 9.322 -39.249 43.234 1.00 24.40 O HETATM 2759 O HOH A 233 18.387 -12.745 39.665 1.00 17.84 O HETATM 2760 O HOH A 234 -3.820 -30.293 54.069 1.00 9.00 O HETATM 2761 O HOH A 235 2.178 -8.339 56.656 1.00 17.22 O HETATM 2762 O HOH A 236 -2.596 -5.011 55.597 1.00 14.11 O HETATM 2763 O HOH A 237 13.179 -48.228 36.350 1.00 13.33 O HETATM 2764 O HOH A 238 25.022 -49.490 26.346 1.00 7.16 O HETATM 2765 O HOH A 239 -7.840 -26.293 46.380 1.00 12.22 O HETATM 2766 O HOH A 240 26.252 -40.856 23.955 1.00 16.09 O HETATM 2767 O HOH A 241 -3.212 -9.609 57.758 1.00 11.40 O HETATM 2768 O HOH A 242 14.667 -38.187 19.732 1.00 19.47 O HETATM 2769 O HOH A 243 7.125 -38.645 45.294 1.00 26.05 O HETATM 2770 O HOH B 201 -16.171 -29.132 51.164 1.00 17.28 O HETATM 2771 O HOH B 202 -26.175 -38.507 46.630 1.00 17.10 O HETATM 2772 O HOH B 203 -14.047 -32.020 49.383 1.00 18.51 O HETATM 2773 O HOH B 204 -3.243 -54.634 4.903 1.00 17.74 O HETATM 2774 O HOH B 205 -17.997 -34.168 49.909 1.00 26.81 O HETATM 2775 O HOH B 206 -30.823 -31.588 36.121 1.00 13.72 O HETATM 2776 O HOH B 207 -25.329 -31.111 44.014 1.00 16.24 O HETATM 2777 O HOH B 208 -14.194 -21.829 46.088 1.00 18.84 O HETATM 2778 O HOH B 209 -11.818 -29.325 29.771 1.00 21.01 O HETATM 2779 O HOH B 210 -20.595 -19.848 42.815 1.00 13.77 O HETATM 2780 O HOH B 211 10.472 -40.051 22.696 1.00 19.10 O HETATM 2781 O HOH B 212 -11.693 -52.383 22.892 1.00 24.81 O HETATM 2782 O HOH B 213 -9.130 -35.801 43.085 1.00 16.21 O HETATM 2783 O HOH B 214 -22.356 -23.877 44.687 1.00 13.39 O HETATM 2784 O HOH B 215 -12.556 -52.728 9.171 1.00 15.40 O HETATM 2785 O HOH B 216 -1.711 -52.147 14.706 1.00 23.40 O HETATM 2786 O HOH B 217 -19.166 -41.311 38.899 1.00 17.74 O HETATM 2787 O HOH B 218 3.528 -47.110 31.717 1.00 18.71 O HETATM 2788 O HOH B 219 -8.215 -49.687 28.929 1.00 23.77 O HETATM 2789 O HOH B 220 4.125 -44.319 9.642 1.00 19.02 O HETATM 2790 O HOH B 221 -3.124 -56.252 17.188 1.00 15.98 O HETATM 2791 O HOH B 222 -21.388 -40.519 41.089 1.00 4.61 O HETATM 2792 O HOH B 223 14.541 -52.610 21.227 1.00 16.20 O HETATM 2793 O HOH B 224 5.922 -44.771 27.897 1.00 15.54 O HETATM 2794 O HOH B 225 -27.685 -26.315 41.056 1.00 14.65 O HETATM 2795 O HOH B 226 6.619 -42.462 37.046 1.00 11.44 O HETATM 2796 O HOH B 227 -10.475 -26.475 46.430 1.00 9.79 O HETATM 2797 O HOH B 228 -28.829 -39.115 34.490 1.00 19.93 O HETATM 2798 O HOH B 229 -21.419 -35.937 20.918 1.00 21.95 O HETATM 2799 O HOH B 230 -25.090 -22.632 43.035 1.00 14.18 O HETATM 2800 O HOH B 231 -13.400 -21.630 39.976 1.00 16.72 O HETATM 2801 O HOH B 232 3.158 -54.337 12.056 1.00 20.20 O HETATM 2802 O HOH B 233 5.775 -46.045 11.186 1.00 15.04 O HETATM 2803 O HOH B 234 -5.422 -43.433 39.886 1.00 16.48 O HETATM 2804 O HOH B 235 -18.315 -39.695 12.757 1.00 19.03 O HETATM 2805 O HOH B 236 2.533 -55.594 5.097 1.00 12.45 O HETATM 2806 O HOH B 237 -0.074 -47.940 40.967 1.00 19.99 O HETATM 2807 O HOH B 238 0.227 -40.991 47.908 1.00 21.21 O HETATM 2808 O HOH B 239 -27.980 -24.468 49.584 1.00 17.24 O HETATM 2809 O HOH B 240 3.814 -54.052 30.334 1.00 6.43 O HETATM 2810 O HOH B 241 -2.128 -56.672 8.320 1.00 12.84 O HETATM 2811 O HOH B 242 -25.077 -26.355 49.462 1.00 7.70 O HETATM 2812 O HOH B 243 -9.301 -43.454 38.924 1.00 24.91 O HETATM 2813 O HOH B 244 -1.668 -31.174 30.056 1.00 34.76 O HETATM 2814 O HOH B 245 7.780 -46.382 26.272 1.00 14.55 O HETATM 2815 O HOH B 246 -26.298 -23.875 40.918 1.00 14.11 O HETATM 2816 O HOH B 247 3.631 -57.445 10.319 1.00 26.76 O HETATM 2817 O HOH B 248 -14.866 -17.021 53.217 1.00 15.05 O HETATM 2818 O HOH B 249 2.702 -57.970 9.113 1.00 21.29 O HETATM 2819 O HOH B 250 -14.572 -19.831 38.178 1.00 19.11 O HETATM 2820 O HOH B 251 -7.089 -45.285 38.591 1.00 24.86 O MASTER 388 0 0 12 0 0 0 6 2818 2 0 28 END