HEADER DNA BINDING PROTEIN/DNA 07-FEB-20 6LWA TITLE CRYSTAL STRUCTURE OF HUMAN NEIL1(P2G, E3Q, K242) BOUND TO DUPLEX DNA TITLE 2 CONTAINING 5-HYDROXYURACIL (5-OHU) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDONUCLEASE 8-LIKE 1; COMPND 3 CHAIN: A, D, G; COMPND 4 SYNONYM: DNA GLYCOSYLASE/AP LYASE NEIL1,DNA-(APURINIC OR APYRIMIDINIC COMPND 5 SITE) LYASE NEIL1,ENDONUCLEASE VIII-LIKE 1,FPG1,NEI HOMOLOG 1,NEH1, COMPND 6 NEI-LIKE PROTEIN 1; COMPND 7 EC: 3.2.2.-,4.2.99.18; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: DNA (5'-D(*CP*GP*TP*CP*CP*AP*(OHU)P*GP*TP*CP*TP*AP*C)-3'); COMPND 12 CHAIN: B, E, H; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: OLIGO DNA CONTAINING OHU; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: DNA (5'-D(*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*G)-3'); COMPND 17 CHAIN: C, F, I; COMPND 18 ENGINEERED: YES; COMPND 19 OTHER_DETAILS: COMPLEMENTARY STRAND SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NEIL1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 11 ORGANISM_TAXID: 562; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 15 ORGANISM_TAXID: 562 KEYWDS BASE LESION, OXIDATIVE DNA DAMAGE, DNA REPAIR, DNA BINDING PROTEIN- KEYWDS 2 DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.H.LIU,J.ZHANG,C.X.ZHU,X.X.ZHANG,Y.Q.GAO,C.Q.YI REVDAT 3 29-NOV-23 6LWA 1 REMARK REVDAT 2 14-JUL-21 6LWA 1 JRNL REVDAT 1 09-JUN-21 6LWA 0 JRNL AUTH M.LIU,J.ZHANG,C.ZHU,X.ZHANG,W.XIAO,Y.YAN,L.LIU,H.ZENG, JRNL AUTH 2 Y.Q.GAO,C.YI JRNL TITL DNA REPAIR GLYCOSYLASE HNEIL1 TRIAGES DAMAGED BASES VIA JRNL TITL 2 COMPETING INTERACTION MODES. JRNL REF NAT COMMUN V. 12 4108 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 34226550 JRNL DOI 10.1038/S41467-021-24431-Y REMARK 2 REMARK 2 RESOLUTION. 2.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 34141 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1765 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.76 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2378 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.37 REMARK 3 BIN R VALUE (WORKING SET) : 0.2960 REMARK 3 BIN FREE R VALUE SET COUNT : 119 REMARK 3 BIN FREE R VALUE : 0.3470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5791 REMARK 3 NUCLEIC ACID ATOMS : 1575 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 138 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 81.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.86000 REMARK 3 B22 (A**2) : -4.11000 REMARK 3 B33 (A**2) : 5.98000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.786 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.324 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.264 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 26.962 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7697 ; 0.009 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 6370 ; 0.002 ; 0.018 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10704 ; 1.627 ; 1.542 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14661 ; 1.351 ; 1.781 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 746 ;11.657 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 346 ;33.112 ;20.029 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 911 ;17.529 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 64 ;22.323 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 909 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7805 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1904 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 290 REMARK 3 ORIGIN FOR THE GROUP (A): 8.616 118.413 204.539 REMARK 3 T TENSOR REMARK 3 T11: 0.0532 T22: 0.0437 REMARK 3 T33: 0.1274 T12: 0.0093 REMARK 3 T13: -0.0656 T23: -0.0114 REMARK 3 L TENSOR REMARK 3 L11: 3.2201 L22: 6.5059 REMARK 3 L33: 1.9194 L12: 2.1418 REMARK 3 L13: 0.0087 L23: -1.9383 REMARK 3 S TENSOR REMARK 3 S11: -0.1766 S12: 0.1309 S13: -0.0682 REMARK 3 S21: -0.3581 S22: 0.2516 S23: 0.5759 REMARK 3 S31: -0.0306 S32: -0.0525 S33: -0.0749 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 13 REMARK 3 ORIGIN FOR THE GROUP (A): 1.097 125.221 188.404 REMARK 3 T TENSOR REMARK 3 T11: 0.5109 T22: 0.3542 REMARK 3 T33: 0.3495 T12: -0.0021 REMARK 3 T13: -0.1415 T23: 0.0320 REMARK 3 L TENSOR REMARK 3 L11: 11.1561 L22: 1.5881 REMARK 3 L33: 1.7560 L12: -1.9704 REMARK 3 L13: 2.1493 L23: -0.3299 REMARK 3 S TENSOR REMARK 3 S11: 0.4179 S12: 0.9150 S13: 0.0799 REMARK 3 S21: -0.7336 S22: -0.2613 S23: 0.0686 REMARK 3 S31: 0.1757 S32: -0.3203 S33: -0.1566 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 13 REMARK 3 ORIGIN FOR THE GROUP (A): -3.897 127.839 189.025 REMARK 3 T TENSOR REMARK 3 T11: 0.3976 T22: 0.3775 REMARK 3 T33: 0.4398 T12: -0.0659 REMARK 3 T13: -0.3207 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 5.9516 L22: 9.5041 REMARK 3 L33: 5.7584 L12: -1.0244 REMARK 3 L13: 0.2299 L23: -2.6852 REMARK 3 S TENSOR REMARK 3 S11: 0.0950 S12: -0.1941 S13: 0.2590 REMARK 3 S21: -0.5241 S22: 0.1620 S23: 0.0796 REMARK 3 S31: -0.3999 S32: 0.3971 S33: -0.2570 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 2 D 290 REMARK 3 ORIGIN FOR THE GROUP (A): 29.590 101.540 220.111 REMARK 3 T TENSOR REMARK 3 T11: 0.0915 T22: 0.1036 REMARK 3 T33: 0.0393 T12: 0.0485 REMARK 3 T13: -0.0145 T23: -0.0059 REMARK 3 L TENSOR REMARK 3 L11: 4.8722 L22: 4.2583 REMARK 3 L33: 3.6141 L12: -2.1714 REMARK 3 L13: -0.5060 L23: 0.9987 REMARK 3 S TENSOR REMARK 3 S11: -0.1574 S12: -0.2365 S13: 0.3656 REMARK 3 S21: 0.2905 S22: 0.1855 S23: -0.0724 REMARK 3 S31: -0.1627 S32: 0.2104 S33: -0.0281 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 13 REMARK 3 ORIGIN FOR THE GROUP (A): 35.980 91.800 234.851 REMARK 3 T TENSOR REMARK 3 T11: 0.5750 T22: 0.5313 REMARK 3 T33: 0.2414 T12: 0.0766 REMARK 3 T13: -0.0573 T23: -0.0526 REMARK 3 L TENSOR REMARK 3 L11: 11.2609 L22: 3.2834 REMARK 3 L33: 1.6610 L12: 2.4161 REMARK 3 L13: 1.8330 L23: -0.8619 REMARK 3 S TENSOR REMARK 3 S11: -0.0612 S12: -0.6134 S13: -0.1050 REMARK 3 S21: 0.3760 S22: 0.1818 S23: 0.0048 REMARK 3 S31: 0.4083 S32: 0.0182 S33: -0.1206 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 1 F 13 REMARK 3 ORIGIN FOR THE GROUP (A): 40.645 93.814 237.179 REMARK 3 T TENSOR REMARK 3 T11: 0.4119 T22: 0.3974 REMARK 3 T33: 0.3684 T12: 0.2018 REMARK 3 T13: -0.2159 T23: -0.1029 REMARK 3 L TENSOR REMARK 3 L11: 8.3020 L22: 6.6998 REMARK 3 L33: 13.7936 L12: 0.6887 REMARK 3 L13: -3.5581 L23: 0.2200 REMARK 3 S TENSOR REMARK 3 S11: -0.0961 S12: -0.6559 S13: 0.5496 REMARK 3 S21: 0.9472 S22: 0.5318 S23: 0.5513 REMARK 3 S31: 0.4828 S32: 0.2132 S33: -0.4358 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 2 G 289 REMARK 3 ORIGIN FOR THE GROUP (A): 42.715 99.883 172.980 REMARK 3 T TENSOR REMARK 3 T11: 0.9318 T22: 0.6354 REMARK 3 T33: 0.2748 T12: 0.1201 REMARK 3 T13: 0.0486 T23: 0.1716 REMARK 3 L TENSOR REMARK 3 L11: 5.6155 L22: 1.9053 REMARK 3 L33: 5.6642 L12: -1.4715 REMARK 3 L13: 3.1417 L23: -0.9703 REMARK 3 S TENSOR REMARK 3 S11: -0.0154 S12: -0.1561 S13: -0.1758 REMARK 3 S21: 0.0039 S22: -0.0882 S23: -0.0167 REMARK 3 S31: -0.1085 S32: 0.4778 S33: 0.1036 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 1 H 13 REMARK 3 ORIGIN FOR THE GROUP (A): 36.877 115.831 168.068 REMARK 3 T TENSOR REMARK 3 T11: 0.7963 T22: 0.7819 REMARK 3 T33: 0.4871 T12: 0.0117 REMARK 3 T13: 0.0353 T23: -0.0430 REMARK 3 L TENSOR REMARK 3 L11: 11.6178 L22: 0.8755 REMARK 3 L33: 3.5420 L12: -0.9330 REMARK 3 L13: -3.8246 L23: 0.7335 REMARK 3 S TENSOR REMARK 3 S11: 0.0531 S12: 0.0182 S13: 0.5988 REMARK 3 S21: -0.2123 S22: -0.0174 S23: -0.1111 REMARK 3 S31: -0.1790 S32: 0.0693 S33: -0.0357 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : I 1 I 13 REMARK 3 ORIGIN FOR THE GROUP (A): 32.365 117.143 170.536 REMARK 3 T TENSOR REMARK 3 T11: 0.6849 T22: 0.5924 REMARK 3 T33: 0.3360 T12: 0.0776 REMARK 3 T13: -0.0620 T23: 0.0741 REMARK 3 L TENSOR REMARK 3 L11: 8.9780 L22: 5.9670 REMARK 3 L33: 3.3981 L12: -1.4995 REMARK 3 L13: 0.5865 L23: 3.6473 REMARK 3 S TENSOR REMARK 3 S11: -0.1120 S12: -0.0929 S13: 0.2854 REMARK 3 S21: 0.3145 S22: -0.0488 S23: -0.0781 REMARK 3 S31: -0.3840 S32: 0.0562 S33: 0.1608 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6LWA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1300015525. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 130 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35964 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.13800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.78000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5ITY REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN I/F_PLUS/MINUS REMARK 200 COLUMNS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CACODYLIC ACID (PH 6.5), 0.1 M REMARK 280 NACL, 0.05 M MGCL2 AND 18% (W/V) PEG 8000, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.77950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.58650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.88550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 84.58650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.77950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.88550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 203 REMARK 465 HIS A 204 REMARK 465 ARG A 205 REMARK 465 PRO A 206 REMARK 465 SER A 207 REMARK 465 PRO A 208 REMARK 465 GLU A 209 REMARK 465 LEU A 210 REMARK 465 THR A 211 REMARK 465 LEU A 212 REMARK 465 SER A 213 REMARK 465 GLN A 214 REMARK 465 LYS A 215 REMARK 465 ILE A 216 REMARK 465 ARG A 217 REMARK 465 THR A 218 REMARK 465 LYS A 219 REMARK 465 LEU A 220 REMARK 465 GLN A 221 REMARK 465 GLY A 245 REMARK 465 SER A 246 REMARK 465 GLU A 247 REMARK 465 SER A 248 REMARK 465 LYS A 291 REMARK 465 GLY A 292 REMARK 465 ARG A 293 REMARK 465 LYS A 294 REMARK 465 SER A 295 REMARK 465 MET D 1 REMARK 465 GLN D 203 REMARK 465 HIS D 204 REMARK 465 ARG D 205 REMARK 465 PRO D 206 REMARK 465 SER D 207 REMARK 465 PRO D 208 REMARK 465 GLU D 209 REMARK 465 LEU D 210 REMARK 465 THR D 211 REMARK 465 LEU D 212 REMARK 465 SER D 213 REMARK 465 GLN D 214 REMARK 465 LYS D 215 REMARK 465 ILE D 216 REMARK 465 ARG D 217 REMARK 465 THR D 218 REMARK 465 LYS D 219 REMARK 465 LEU D 220 REMARK 465 GLN D 221 REMARK 465 SER D 246 REMARK 465 GLU D 247 REMARK 465 SER D 248 REMARK 465 LYS D 291 REMARK 465 GLY D 292 REMARK 465 ARG D 293 REMARK 465 LYS D 294 REMARK 465 SER D 295 REMARK 465 MET G 1 REMARK 465 ARG G 19 REMARK 465 ALA G 20 REMARK 465 LEU G 21 REMARK 465 VAL G 22 REMARK 465 PHE G 23 REMARK 465 GLY G 24 REMARK 465 GLY G 25 REMARK 465 CYS G 26 REMARK 465 GLU G 41 REMARK 465 SER G 42 REMARK 465 SER G 43 REMARK 465 ALA G 44 REMARK 465 LEU G 63 REMARK 465 PRO G 64 REMARK 465 GLY G 65 REMARK 465 ALA G 66 REMARK 465 GLN G 67 REMARK 465 PRO G 68 REMARK 465 GLN G 69 REMARK 465 GLN G 70 REMARK 465 GLU G 71 REMARK 465 PRO G 72 REMARK 465 LEU G 73 REMARK 465 ALA G 74 REMARK 465 LEU G 75 REMARK 465 GLU G 91 REMARK 465 GLU G 92 REMARK 465 PRO G 108 REMARK 465 ARG G 109 REMARK 465 LEU G 110 REMARK 465 GLN G 202 REMARK 465 GLN G 203 REMARK 465 HIS G 204 REMARK 465 ARG G 205 REMARK 465 PRO G 206 REMARK 465 SER G 207 REMARK 465 PRO G 208 REMARK 465 GLU G 209 REMARK 465 LEU G 210 REMARK 465 THR G 211 REMARK 465 LEU G 212 REMARK 465 SER G 213 REMARK 465 GLN G 214 REMARK 465 LYS G 215 REMARK 465 ILE G 216 REMARK 465 ARG G 217 REMARK 465 THR G 218 REMARK 465 LYS G 219 REMARK 465 LEU G 220 REMARK 465 GLN G 221 REMARK 465 ASN G 222 REMARK 465 GLY G 240 REMARK 465 GLY G 241 REMARK 465 LYS G 242 REMARK 465 GLY G 243 REMARK 465 TYR G 244 REMARK 465 GLY G 245 REMARK 465 SER G 246 REMARK 465 GLU G 247 REMARK 465 SER G 248 REMARK 465 GLY G 249 REMARK 465 PRO G 290 REMARK 465 LYS G 291 REMARK 465 GLY G 292 REMARK 465 ARG G 293 REMARK 465 LYS G 294 REMARK 465 SER G 295 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU D 251 CB CG CD OE1 OE2 REMARK 470 GLN G 12 CB CG CD OE1 NE2 REMARK 470 GLU G 16 CB CG CD OE1 OE2 REMARK 470 VAL G 27 CB CG1 CG2 REMARK 470 VAL G 38 CG1 CG2 REMARK 470 PHE G 40 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR G 45 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR G 45 OH REMARK 470 ARG G 46 CB CG CD NE CZ NH1 NH2 REMARK 470 ILE G 47 CG1 CG2 CD1 REMARK 470 SER G 48 CB OG REMARK 470 LEU G 56 CB CG CD1 CD2 REMARK 470 ARG G 57 CB CG CD NE CZ NH1 NH2 REMARK 470 LEU G 58 CB CG CD1 CD2 REMARK 470 ILE G 59 CG1 CG2 CD1 REMARK 470 LEU G 60 CB CG CD1 CD2 REMARK 470 SER G 61 CB OG REMARK 470 PHE G 77 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN G 86 CB CG CD OE1 NE2 REMARK 470 LEU G 87 CG CD1 CD2 REMARK 470 VAL G 88 CG1 CG2 REMARK 470 ARG G 90 CG CD NE CZ NH1 NH2 REMARK 470 PRO G 94 CG CD REMARK 470 ARG G 100 CB CG CD NE CZ NH1 NH2 REMARK 470 THR G 103 OG1 CG2 REMARK 470 ALA G 104 CB REMARK 470 PRO G 105 CB CG CD REMARK 470 PRO G 106 CG CD REMARK 470 CYS G 113 CB SG REMARK 470 ILE G 117 CD1 REMARK 470 ARG G 122 CG CD NE CZ NH1 NH2 REMARK 470 LEU G 125 CB CG CD1 CD2 REMARK 470 TRP G 129 CB CG CD1 CD2 NE1 CE2 CE3 REMARK 470 TRP G 129 CZ2 CZ3 CH2 REMARK 470 ARG G 133 CG CD NE CZ NH1 NH2 REMARK 470 ASN G 147 CB CG OD1 ND2 REMARK 470 VAL G 148 CB CG1 CG2 REMARK 470 LEU G 149 CB CG CD1 CD2 REMARK 470 ARG G 150 CB CG CD NE CZ NH1 NH2 REMARK 470 LEU G 152 CB CG CD1 CD2 REMARK 470 ALA G 153 CB REMARK 470 ALA G 156 CB REMARK 470 PHE G 157 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG G 159 CB CG CD NE CZ NH1 NH2 REMARK 470 LEU G 165 CB CG CD1 CD2 REMARK 470 PHE G 170 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE G 174 CG1 CG2 CD1 REMARK 470 TYR G 184 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE G 188 CG1 CG2 CD1 REMARK 470 GLU G 192 CB CG CD OE1 OE2 REMARK 470 ALA G 194 CB REMARK 470 ARG G 195 CB CG CD NE CZ NH1 NH2 REMARK 470 VAL G 197 CB CG1 CG2 REMARK 470 LEU G 198 CG CD1 CD2 REMARK 470 GLU G 199 CB CG CD OE1 OE2 REMARK 470 GLU G 250 CG CD OE1 OE2 REMARK 470 GLU G 251 CB CG CD OE1 OE2 REMARK 470 ASP G 252 CG OD1 OD2 REMARK 470 PHE G 253 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER G 270 CB OG REMARK 470 LEU G 271 CB CG CD1 CD2 REMARK 470 GLN G 272 CG CD OE1 NE2 REMARK 470 ILE G 279 CD1 REMARK 470 GLN G 282 CG CD OE1 NE2 REMARK 470 PRO G 285 CB CG CD REMARK 470 PRO G 287 CB CG CD REMARK 470 LEU G 288 CB CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 143 O HOH A 301 1.72 REMARK 500 O HOH E 101 O HOH E 102 1.88 REMARK 500 O GLY A 2 O HOH A 302 2.02 REMARK 500 O GLU A 41 NE2 GLN A 70 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 227 CD GLU A 227 OE1 0.094 REMARK 500 DG E 8 O3' DT E 9 P 0.082 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG D 150 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG D 150 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 DG E 8 O5' - P - OP1 ANGL. DEV. = -11.4 DEGREES REMARK 500 PRO G 106 C - N - CA ANGL. DEV. = 26.4 DEGREES REMARK 500 DT H 3 C4' - C3' - O3' ANGL. DEV. = 14.5 DEGREES REMARK 500 DT H 3 C2' - C3' - O3' ANGL. DEV. = -15.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 82 25.80 -141.33 REMARK 500 GLU A 92 50.97 -141.35 REMARK 500 ALA A 97 96.96 -68.05 REMARK 500 ASN A 172 106.09 -52.53 REMARK 500 ALA A 200 21.44 -71.76 REMARK 500 LEU A 201 -160.77 -129.75 REMARK 500 CYS A 262 -58.50 -128.83 REMARK 500 ALA D 44 112.50 -161.21 REMARK 500 SER D 82 27.23 -142.62 REMARK 500 GLU D 92 55.24 -140.82 REMARK 500 ALA D 97 95.54 -65.36 REMARK 500 ASN D 172 104.54 -53.21 REMARK 500 ALA D 200 24.33 -75.77 REMARK 500 CYS D 262 -59.83 -130.06 REMARK 500 SER G 82 26.96 -146.01 REMARK 500 ALA G 97 96.32 -61.94 REMARK 500 PRO G 106 105.27 79.64 REMARK 500 ASN G 172 107.25 -58.50 REMARK 500 CYS G 262 -59.17 -131.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 105 PRO A 106 34.75 REMARK 500 GLY D 107 PRO D 108 149.65 REMARK 500 REMARK 500 REMARK: NULL DBREF 6LWA A 1 295 UNP Q96FI4 NEIL1_HUMAN 1 295 DBREF 6LWA B 1 13 PDB 6LWA 6LWA 1 13 DBREF 6LWA C 1 13 PDB 6LWA 6LWA 1 13 DBREF 6LWA D 1 295 UNP Q96FI4 NEIL1_HUMAN 1 295 DBREF 6LWA E 1 13 PDB 6LWA 6LWA 1 13 DBREF 6LWA F 1 13 PDB 6LWA 6LWA 1 13 DBREF 6LWA G 1 295 UNP Q96FI4 NEIL1_HUMAN 1 295 DBREF 6LWA H 1 13 PDB 6LWA 6LWA 1 13 DBREF 6LWA I 1 13 PDB 6LWA 6LWA 1 13 SEQADV 6LWA GLY A 2 UNP Q96FI4 PRO 2 ENGINEERED MUTATION SEQADV 6LWA GLN A 3 UNP Q96FI4 GLU 3 ENGINEERED MUTATION SEQADV 6LWA GLY D 2 UNP Q96FI4 PRO 2 ENGINEERED MUTATION SEQADV 6LWA GLN D 3 UNP Q96FI4 GLU 3 ENGINEERED MUTATION SEQADV 6LWA GLY G 2 UNP Q96FI4 PRO 2 ENGINEERED MUTATION SEQADV 6LWA GLN G 3 UNP Q96FI4 GLU 3 ENGINEERED MUTATION SEQRES 1 A 295 MET GLY GLN GLY PRO GLU LEU HIS LEU ALA SER GLN PHE SEQRES 2 A 295 VAL ASN GLU ALA CYS ARG ALA LEU VAL PHE GLY GLY CYS SEQRES 3 A 295 VAL GLU LYS SER SER VAL SER ARG ASN PRO GLU VAL PRO SEQRES 4 A 295 PHE GLU SER SER ALA TYR ARG ILE SER ALA SER ALA ARG SEQRES 5 A 295 GLY LYS GLU LEU ARG LEU ILE LEU SER PRO LEU PRO GLY SEQRES 6 A 295 ALA GLN PRO GLN GLN GLU PRO LEU ALA LEU VAL PHE ARG SEQRES 7 A 295 PHE GLY MET SER GLY SER PHE GLN LEU VAL PRO ARG GLU SEQRES 8 A 295 GLU LEU PRO ARG HIS ALA HIS LEU ARG PHE TYR THR ALA SEQRES 9 A 295 PRO PRO GLY PRO ARG LEU ALA LEU CYS PHE VAL ASP ILE SEQRES 10 A 295 ARG ARG PHE GLY ARG TRP ASP LEU GLY GLY LYS TRP GLN SEQRES 11 A 295 PRO GLY ARG GLY PRO CYS VAL LEU GLN GLU TYR GLN GLN SEQRES 12 A 295 PHE ARG GLU ASN VAL LEU ARG ASN LEU ALA ASP LYS ALA SEQRES 13 A 295 PHE ASP ARG PRO ILE CYS GLU ALA LEU LEU ASP GLN ARG SEQRES 14 A 295 PHE PHE ASN GLY ILE GLY ASN TYR LEU ARG ALA GLU ILE SEQRES 15 A 295 LEU TYR ARG LEU LYS ILE PRO PRO PHE GLU LYS ALA ARG SEQRES 16 A 295 SER VAL LEU GLU ALA LEU GLN GLN HIS ARG PRO SER PRO SEQRES 17 A 295 GLU LEU THR LEU SER GLN LYS ILE ARG THR LYS LEU GLN SEQRES 18 A 295 ASN PRO ASP LEU LEU GLU LEU CYS HIS SER VAL PRO LYS SEQRES 19 A 295 GLU VAL VAL GLN LEU GLY GLY LYS GLY TYR GLY SER GLU SEQRES 20 A 295 SER GLY GLU GLU ASP PHE ALA ALA PHE ARG ALA TRP LEU SEQRES 21 A 295 ARG CYS TYR GLY MET PRO GLY MET SER SER LEU GLN ASP SEQRES 22 A 295 ARG HIS GLY ARG THR ILE TRP PHE GLN GLY ASP PRO GLY SEQRES 23 A 295 PRO LEU ALA PRO LYS GLY ARG LYS SER SEQRES 1 B 13 DC DG DT DC DC DA OHU DG DT DC DT DA DC SEQRES 1 C 13 DT DA DG DA DC DC DT DG DG DA DC DG DG SEQRES 1 D 295 MET GLY GLN GLY PRO GLU LEU HIS LEU ALA SER GLN PHE SEQRES 2 D 295 VAL ASN GLU ALA CYS ARG ALA LEU VAL PHE GLY GLY CYS SEQRES 3 D 295 VAL GLU LYS SER SER VAL SER ARG ASN PRO GLU VAL PRO SEQRES 4 D 295 PHE GLU SER SER ALA TYR ARG ILE SER ALA SER ALA ARG SEQRES 5 D 295 GLY LYS GLU LEU ARG LEU ILE LEU SER PRO LEU PRO GLY SEQRES 6 D 295 ALA GLN PRO GLN GLN GLU PRO LEU ALA LEU VAL PHE ARG SEQRES 7 D 295 PHE GLY MET SER GLY SER PHE GLN LEU VAL PRO ARG GLU SEQRES 8 D 295 GLU LEU PRO ARG HIS ALA HIS LEU ARG PHE TYR THR ALA SEQRES 9 D 295 PRO PRO GLY PRO ARG LEU ALA LEU CYS PHE VAL ASP ILE SEQRES 10 D 295 ARG ARG PHE GLY ARG TRP ASP LEU GLY GLY LYS TRP GLN SEQRES 11 D 295 PRO GLY ARG GLY PRO CYS VAL LEU GLN GLU TYR GLN GLN SEQRES 12 D 295 PHE ARG GLU ASN VAL LEU ARG ASN LEU ALA ASP LYS ALA SEQRES 13 D 295 PHE ASP ARG PRO ILE CYS GLU ALA LEU LEU ASP GLN ARG SEQRES 14 D 295 PHE PHE ASN GLY ILE GLY ASN TYR LEU ARG ALA GLU ILE SEQRES 15 D 295 LEU TYR ARG LEU LYS ILE PRO PRO PHE GLU LYS ALA ARG SEQRES 16 D 295 SER VAL LEU GLU ALA LEU GLN GLN HIS ARG PRO SER PRO SEQRES 17 D 295 GLU LEU THR LEU SER GLN LYS ILE ARG THR LYS LEU GLN SEQRES 18 D 295 ASN PRO ASP LEU LEU GLU LEU CYS HIS SER VAL PRO LYS SEQRES 19 D 295 GLU VAL VAL GLN LEU GLY GLY LYS GLY TYR GLY SER GLU SEQRES 20 D 295 SER GLY GLU GLU ASP PHE ALA ALA PHE ARG ALA TRP LEU SEQRES 21 D 295 ARG CYS TYR GLY MET PRO GLY MET SER SER LEU GLN ASP SEQRES 22 D 295 ARG HIS GLY ARG THR ILE TRP PHE GLN GLY ASP PRO GLY SEQRES 23 D 295 PRO LEU ALA PRO LYS GLY ARG LYS SER SEQRES 1 E 13 DC DG DT DC DC DA OHU DG DT DC DT DA DC SEQRES 1 F 13 DT DA DG DA DC DC DT DG DG DA DC DG DG SEQRES 1 G 295 MET GLY GLN GLY PRO GLU LEU HIS LEU ALA SER GLN PHE SEQRES 2 G 295 VAL ASN GLU ALA CYS ARG ALA LEU VAL PHE GLY GLY CYS SEQRES 3 G 295 VAL GLU LYS SER SER VAL SER ARG ASN PRO GLU VAL PRO SEQRES 4 G 295 PHE GLU SER SER ALA TYR ARG ILE SER ALA SER ALA ARG SEQRES 5 G 295 GLY LYS GLU LEU ARG LEU ILE LEU SER PRO LEU PRO GLY SEQRES 6 G 295 ALA GLN PRO GLN GLN GLU PRO LEU ALA LEU VAL PHE ARG SEQRES 7 G 295 PHE GLY MET SER GLY SER PHE GLN LEU VAL PRO ARG GLU SEQRES 8 G 295 GLU LEU PRO ARG HIS ALA HIS LEU ARG PHE TYR THR ALA SEQRES 9 G 295 PRO PRO GLY PRO ARG LEU ALA LEU CYS PHE VAL ASP ILE SEQRES 10 G 295 ARG ARG PHE GLY ARG TRP ASP LEU GLY GLY LYS TRP GLN SEQRES 11 G 295 PRO GLY ARG GLY PRO CYS VAL LEU GLN GLU TYR GLN GLN SEQRES 12 G 295 PHE ARG GLU ASN VAL LEU ARG ASN LEU ALA ASP LYS ALA SEQRES 13 G 295 PHE ASP ARG PRO ILE CYS GLU ALA LEU LEU ASP GLN ARG SEQRES 14 G 295 PHE PHE ASN GLY ILE GLY ASN TYR LEU ARG ALA GLU ILE SEQRES 15 G 295 LEU TYR ARG LEU LYS ILE PRO PRO PHE GLU LYS ALA ARG SEQRES 16 G 295 SER VAL LEU GLU ALA LEU GLN GLN HIS ARG PRO SER PRO SEQRES 17 G 295 GLU LEU THR LEU SER GLN LYS ILE ARG THR LYS LEU GLN SEQRES 18 G 295 ASN PRO ASP LEU LEU GLU LEU CYS HIS SER VAL PRO LYS SEQRES 19 G 295 GLU VAL VAL GLN LEU GLY GLY LYS GLY TYR GLY SER GLU SEQRES 20 G 295 SER GLY GLU GLU ASP PHE ALA ALA PHE ARG ALA TRP LEU SEQRES 21 G 295 ARG CYS TYR GLY MET PRO GLY MET SER SER LEU GLN ASP SEQRES 22 G 295 ARG HIS GLY ARG THR ILE TRP PHE GLN GLY ASP PRO GLY SEQRES 23 G 295 PRO LEU ALA PRO LYS GLY ARG LYS SER SEQRES 1 H 13 DC DG DT DC DC DA OHU DG DT DC DT DA DC SEQRES 1 I 13 DT DA DG DA DC DC DT DG DG DA DC DG DG HET OHU B 7 20 HET OHU E 7 20 HET OHU H 7 20 HETNAM OHU 2'-DEOXY-5-HYDROXYURIDINE 5'-(DIHYDROGEN PHOSPHATE) FORMUL 2 OHU 3(C9 H13 N2 O9 P) FORMUL 10 HOH *138(H2 O) HELIX 1 AA1 GLN A 3 ARG A 19 1 17 HELIX 2 AA2 GLU A 140 ARG A 150 1 11 HELIX 3 AA3 ASP A 154 ARG A 159 5 6 HELIX 4 AA4 PRO A 160 LEU A 165 1 6 HELIX 5 AA5 GLY A 175 LEU A 186 1 12 HELIX 6 AA6 LYS A 193 ALA A 200 1 8 HELIX 7 AA7 ASP A 224 GLY A 240 1 17 HELIX 8 AA8 GLU A 250 LEU A 260 1 11 HELIX 9 AA9 GLN D 3 ARG D 19 1 17 HELIX 10 AB1 GLU D 140 ARG D 150 1 11 HELIX 11 AB2 ASP D 154 ARG D 159 5 6 HELIX 12 AB3 PRO D 160 LEU D 165 1 6 HELIX 13 AB4 GLY D 175 LEU D 186 1 12 HELIX 14 AB5 LYS D 193 ALA D 200 1 8 HELIX 15 AB6 ASP D 224 GLY D 240 1 17 HELIX 16 AB7 GLU D 250 LEU D 260 1 11 HELIX 17 AB8 GLN G 3 CYS G 18 1 16 HELIX 18 AB9 GLU G 140 ARG G 150 1 11 HELIX 19 AC1 ASP G 154 ARG G 159 5 6 HELIX 20 AC2 PRO G 160 LEU G 165 1 6 HELIX 21 AC3 GLY G 175 LEU G 186 1 12 HELIX 22 AC4 LYS G 193 ALA G 200 1 8 HELIX 23 AC5 ASP G 224 LEU G 239 1 16 HELIX 24 AC6 GLU G 251 LEU G 260 1 10 SHEET 1 AA1 8 GLY A 83 PRO A 89 0 SHEET 2 AA1 8 LEU A 110 ASP A 116 -1 O ALA A 111 N VAL A 88 SHEET 3 AA1 8 ALA A 97 TYR A 102 -1 N LEU A 99 O PHE A 114 SHEET 4 AA1 8 PHE A 23 LYS A 29 -1 N GLU A 28 O ARG A 100 SHEET 5 AA1 8 VAL A 38 ARG A 52 -1 O TYR A 45 N PHE A 23 SHEET 6 AA1 8 GLU A 55 PRO A 62 -1 O SER A 61 N ARG A 46 SHEET 7 AA1 8 LEU A 73 ARG A 78 -1 O LEU A 73 N LEU A 60 SHEET 8 AA1 8 ARG A 122 ASP A 124 -1 O ARG A 122 N ARG A 78 SHEET 1 AA2 2 SER A 269 GLN A 272 0 SHEET 2 AA2 2 THR A 278 PHE A 281 -1 O ILE A 279 N LEU A 271 SHEET 1 AA3 5 PHE D 23 CYS D 26 0 SHEET 2 AA3 5 GLU D 41 ARG D 52 -1 O TYR D 45 N PHE D 23 SHEET 3 AA3 5 GLU D 55 PRO D 62 -1 O ARG D 57 N SER D 50 SHEET 4 AA3 5 LEU D 73 ARG D 78 -1 O LEU D 73 N LEU D 60 SHEET 5 AA3 5 ARG D 122 LEU D 125 -1 O ARG D 122 N ARG D 78 SHEET 1 AA4 4 GLU D 28 LYS D 29 0 SHEET 2 AA4 4 ALA D 97 TYR D 102 -1 O ARG D 100 N GLU D 28 SHEET 3 AA4 4 LEU D 110 ASP D 116 -1 O LEU D 112 N PHE D 101 SHEET 4 AA4 4 GLY D 83 PRO D 89 -1 N VAL D 88 O ALA D 111 SHEET 1 AA5 2 SER D 269 GLN D 272 0 SHEET 2 AA5 2 THR D 278 PHE D 281 -1 O ILE D 279 N LEU D 271 SHEET 1 AA6 4 GLU G 28 LYS G 29 0 SHEET 2 AA6 4 ALA G 97 PHE G 101 -1 O ARG G 100 N GLU G 28 SHEET 3 AA6 4 LEU G 112 ASP G 116 -1 O PHE G 114 N LEU G 99 SHEET 4 AA6 4 GLY G 83 LEU G 87 -1 N GLN G 86 O CYS G 113 SHEET 1 AA7 4 SER G 48 ARG G 52 0 SHEET 2 AA7 4 GLU G 55 ILE G 59 -1 O ARG G 57 N SER G 50 SHEET 3 AA7 4 PHE G 77 ARG G 78 -1 O PHE G 77 N LEU G 56 SHEET 4 AA7 4 ARG G 122 TRP G 123 -1 O ARG G 122 N ARG G 78 SHEET 1 AA8 2 SER G 269 GLN G 272 0 SHEET 2 AA8 2 THR G 278 PHE G 281 -1 O ILE G 279 N LEU G 271 LINK O3' DA B 6 P OHU B 7 1555 1555 1.60 LINK O3' OHU B 7 P DG B 8 1555 1555 1.60 LINK O3' DA E 6 P OHU E 7 1555 1555 1.57 LINK O3' OHU E 7 P DG E 8 1555 1555 1.57 LINK O3' DA H 6 P OHU H 7 1555 1555 1.59 LINK O3' OHU H 7 P DG H 8 1555 1555 1.58 CISPEP 1 GLN A 67 PRO A 68 0 -9.60 CISPEP 2 GLN D 67 PRO D 68 0 -7.34 CISPEP 3 PRO D 105 PRO D 106 0 -27.11 CRYST1 73.559 109.771 169.173 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013595 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009110 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005911 0.00000