HEADER DNA BINDING PROTEIN/DNA 07-FEB-20 6LWD TITLE CRYSTAL STRUCTURE OF HUMAN NEIL1(P2G, E3Q, R242) BOUND TO DUPLEX DNA TITLE 2 CONTAINING SPIROIMINODIHYDANTOIN (SP) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDONUCLEASE 8-LIKE 1; COMPND 3 CHAIN: A, D, G; COMPND 4 SYNONYM: DNA GLYCOSYLASE/AP LYASE NEIL1,DNA-(APURINIC OR APYRIMIDINIC COMPND 5 SITE) LYASE NEIL1,ENDONUCLEASE VIII-LIKE 1,FPG1,NEI HOMOLOG 1,NEH1, COMPND 6 NEI-LIKE PROTEIN 1; COMPND 7 EC: 3.2.2.-,4.2.99.18; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: DNA (5'-D(*CP*GP*TP*CP*CP*AP*(DSP)P*GP*TP*CP*TP*AP*C)-3'); COMPND 12 CHAIN: B, E, H; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: OLIGO DNA CONTAINING SP; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: DNA (5'-D(*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*G)-3'); COMPND 17 CHAIN: C, F, I; COMPND 18 ENGINEERED: YES; COMPND 19 OTHER_DETAILS: COMPLEMENTARY STRAND SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NEIL1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 11 ORGANISM_TAXID: 562; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 15 ORGANISM_TAXID: 562 KEYWDS BASE LESION, OXIDATIVE DNA DAMAGE, DNA REPAIR, DNA BINDING PROTEIN- KEYWDS 2 DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.H.LIU,J.ZHANG,C.X.ZHU,X.X.ZHANG,Y.Q.GAO,C.Q.YI REVDAT 3 29-NOV-23 6LWD 1 REMARK REVDAT 2 14-JUL-21 6LWD 1 JRNL REVDAT 1 09-JUN-21 6LWD 0 JRNL AUTH M.LIU,J.ZHANG,C.ZHU,X.ZHANG,W.XIAO,Y.YAN,L.LIU,H.ZENG, JRNL AUTH 2 Y.Q.GAO,C.YI JRNL TITL DNA REPAIR GLYCOSYLASE HNEIL1 TRIAGES DAMAGED BASES VIA JRNL TITL 2 COMPETING INTERACTION MODES. JRNL REF NAT COMMUN V. 12 4108 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 34226550 JRNL DOI 10.1038/S41467-021-24431-Y REMARK 2 REMARK 2 RESOLUTION. 2.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 50455 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2720 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.41 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.47 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3563 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.53 REMARK 3 BIN R VALUE (WORKING SET) : 0.2880 REMARK 3 BIN FREE R VALUE SET COUNT : 193 REMARK 3 BIN FREE R VALUE : 0.3000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5769 REMARK 3 NUCLEIC ACID ATOMS : 1587 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 294 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.85000 REMARK 3 B22 (A**2) : -3.55000 REMARK 3 B33 (A**2) : 5.40000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.322 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.243 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.186 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.123 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7695 ; 0.008 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 6339 ; 0.002 ; 0.018 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10706 ; 1.661 ; 1.546 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14569 ; 1.320 ; 1.782 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 748 ;12.320 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 348 ;32.396 ;19.741 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 903 ;16.702 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 67 ;23.614 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 912 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7817 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1928 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 290 REMARK 3 ORIGIN FOR THE GROUP (A): -8.399 -8.505 35.225 REMARK 3 T TENSOR REMARK 3 T11: 0.0264 T22: 0.1074 REMARK 3 T33: 0.0841 T12: 0.0098 REMARK 3 T13: 0.0326 T23: 0.0329 REMARK 3 L TENSOR REMARK 3 L11: 2.8406 L22: 6.0842 REMARK 3 L33: 1.1499 L12: 2.1553 REMARK 3 L13: 0.3963 L23: 1.3777 REMARK 3 S TENSOR REMARK 3 S11: -0.1817 S12: 0.1315 S13: 0.0285 REMARK 3 S21: -0.3291 S22: 0.2170 S23: -0.4707 REMARK 3 S31: -0.0545 S32: 0.0750 S33: -0.0354 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 13 REMARK 3 ORIGIN FOR THE GROUP (A): -1.071 -15.194 19.193 REMARK 3 T TENSOR REMARK 3 T11: 0.4343 T22: 0.3726 REMARK 3 T33: 0.4110 T12: -0.0619 REMARK 3 T13: 0.1562 T23: -0.0137 REMARK 3 L TENSOR REMARK 3 L11: 8.4014 L22: 1.4968 REMARK 3 L33: 5.0543 L12: -1.2050 REMARK 3 L13: -1.9112 L23: 0.8257 REMARK 3 S TENSOR REMARK 3 S11: 0.1983 S12: 0.7464 S13: -0.1020 REMARK 3 S21: -0.6595 S22: -0.0971 S23: -0.1800 REMARK 3 S31: -0.0954 S32: 0.2972 S33: -0.1012 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 13 REMARK 3 ORIGIN FOR THE GROUP (A): 4.058 -17.775 19.663 REMARK 3 T TENSOR REMARK 3 T11: 0.4404 T22: 0.4832 REMARK 3 T33: 0.4291 T12: -0.0509 REMARK 3 T13: 0.2859 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 6.9296 L22: 8.2977 REMARK 3 L33: 5.8587 L12: -1.8367 REMARK 3 L13: 0.2905 L23: 2.0799 REMARK 3 S TENSOR REMARK 3 S11: 0.0528 S12: -0.1398 S13: -0.2691 REMARK 3 S21: -0.2827 S22: 0.1738 S23: -0.1090 REMARK 3 S31: 0.4215 S32: -0.4524 S33: -0.2266 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 2 D 290 REMARK 3 ORIGIN FOR THE GROUP (A): -29.381 8.606 50.760 REMARK 3 T TENSOR REMARK 3 T11: 0.1020 T22: 0.1732 REMARK 3 T33: 0.0277 T12: 0.0649 REMARK 3 T13: 0.0085 T23: -0.0139 REMARK 3 L TENSOR REMARK 3 L11: 5.0592 L22: 4.0503 REMARK 3 L33: 2.7262 L12: -2.4780 REMARK 3 L13: 0.0681 L23: -0.2474 REMARK 3 S TENSOR REMARK 3 S11: -0.1956 S12: -0.3034 S13: -0.2828 REMARK 3 S21: 0.3489 S22: 0.2266 S23: 0.0831 REMARK 3 S31: 0.1092 S32: -0.1025 S33: -0.0310 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 13 REMARK 3 ORIGIN FOR THE GROUP (A): -36.030 17.820 65.185 REMARK 3 T TENSOR REMARK 3 T11: 0.4854 T22: 0.5328 REMARK 3 T33: 0.3009 T12: 0.0480 REMARK 3 T13: -0.0028 T23: 0.0132 REMARK 3 L TENSOR REMARK 3 L11: 8.3839 L22: 2.5393 REMARK 3 L33: 3.4609 L12: 1.1558 REMARK 3 L13: -3.2454 L23: 0.0620 REMARK 3 S TENSOR REMARK 3 S11: -0.1969 S12: -0.6393 S13: 0.2375 REMARK 3 S21: 0.4262 S22: 0.1640 S23: 0.3163 REMARK 3 S31: -0.2516 S32: -0.0943 S33: 0.0329 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 1 F 13 REMARK 3 ORIGIN FOR THE GROUP (A): -40.748 15.907 67.626 REMARK 3 T TENSOR REMARK 3 T11: 0.3593 T22: 0.4513 REMARK 3 T33: 0.3147 T12: 0.1707 REMARK 3 T13: 0.1259 T23: 0.0553 REMARK 3 L TENSOR REMARK 3 L11: 8.4609 L22: 2.9590 REMARK 3 L33: 11.2457 L12: 0.1075 REMARK 3 L13: 1.0769 L23: -0.2773 REMARK 3 S TENSOR REMARK 3 S11: -0.0521 S12: -0.7438 S13: -0.2212 REMARK 3 S21: 0.8086 S22: 0.2903 S23: -0.2519 REMARK 3 S31: -0.0392 S32: -0.0482 S33: -0.2382 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 2 G 289 REMARK 3 ORIGIN FOR THE GROUP (A): -41.892 9.964 3.607 REMARK 3 T TENSOR REMARK 3 T11: 0.7592 T22: 0.6041 REMARK 3 T33: 0.2240 T12: 0.1259 REMARK 3 T13: -0.0414 T23: -0.1432 REMARK 3 L TENSOR REMARK 3 L11: 5.1491 L22: 1.9354 REMARK 3 L33: 5.2735 L12: -1.0258 REMARK 3 L13: -3.0259 L23: 0.5340 REMARK 3 S TENSOR REMARK 3 S11: 0.0146 S12: -0.1490 S13: 0.2140 REMARK 3 S21: -0.0019 S22: -0.0920 S23: 0.0777 REMARK 3 S31: 0.0923 S32: -0.3619 S33: 0.0775 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 1 H 13 REMARK 3 ORIGIN FOR THE GROUP (A): -36.788 -5.651 -0.964 REMARK 3 T TENSOR REMARK 3 T11: 0.7694 T22: 0.8262 REMARK 3 T33: 0.4594 T12: -0.0401 REMARK 3 T13: 0.0550 T23: -0.0112 REMARK 3 L TENSOR REMARK 3 L11: 7.6708 L22: 3.2310 REMARK 3 L33: 5.4490 L12: -0.8008 REMARK 3 L13: 2.3145 L23: 0.1504 REMARK 3 S TENSOR REMARK 3 S11: -0.0412 S12: -0.1265 S13: -0.8859 REMARK 3 S21: -0.1702 S22: 0.0689 S23: 0.1063 REMARK 3 S31: 0.2127 S32: -0.2992 S33: -0.0277 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : I 1 I 13 REMARK 3 ORIGIN FOR THE GROUP (A): -32.057 -7.193 1.514 REMARK 3 T TENSOR REMARK 3 T11: 0.6638 T22: 0.8012 REMARK 3 T33: 0.3751 T12: 0.0920 REMARK 3 T13: 0.0924 T23: -0.0445 REMARK 3 L TENSOR REMARK 3 L11: 5.8182 L22: 7.8779 REMARK 3 L33: 2.7810 L12: -0.9907 REMARK 3 L13: -0.5863 L23: -3.4325 REMARK 3 S TENSOR REMARK 3 S11: -0.0970 S12: -0.2027 S13: -0.5154 REMARK 3 S21: 0.5039 S22: -0.0740 S23: 0.1519 REMARK 3 S31: 0.4813 S32: -0.2285 S33: 0.1710 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6LWD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1300015544. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JAN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 130 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53244 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.99900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5ITY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CACODYLIC ACID (PH 6.5), 0.1 M REMARK 280 NACL, 0.05 M MGCL2 AND 18% (W/V) PEG 8000, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.79250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.11950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.65350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 84.11950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.79250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.65350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 203 REMARK 465 HIS A 204 REMARK 465 ARG A 205 REMARK 465 PRO A 206 REMARK 465 SER A 207 REMARK 465 PRO A 208 REMARK 465 GLU A 209 REMARK 465 LEU A 210 REMARK 465 THR A 211 REMARK 465 LEU A 212 REMARK 465 SER A 213 REMARK 465 GLN A 214 REMARK 465 LYS A 215 REMARK 465 ILE A 216 REMARK 465 ARG A 217 REMARK 465 THR A 218 REMARK 465 LYS A 219 REMARK 465 LEU A 220 REMARK 465 GLN A 221 REMARK 465 LYS A 291 REMARK 465 GLY A 292 REMARK 465 ARG A 293 REMARK 465 LYS A 294 REMARK 465 SER A 295 REMARK 465 MET D 1 REMARK 465 GLN D 203 REMARK 465 HIS D 204 REMARK 465 ARG D 205 REMARK 465 PRO D 206 REMARK 465 SER D 207 REMARK 465 PRO D 208 REMARK 465 GLU D 209 REMARK 465 LEU D 210 REMARK 465 THR D 211 REMARK 465 LEU D 212 REMARK 465 SER D 213 REMARK 465 GLN D 214 REMARK 465 LYS D 215 REMARK 465 ILE D 216 REMARK 465 ARG D 217 REMARK 465 THR D 218 REMARK 465 LYS D 219 REMARK 465 LEU D 220 REMARK 465 GLN D 221 REMARK 465 ASN D 222 REMARK 465 GLY D 245 REMARK 465 SER D 246 REMARK 465 GLU D 247 REMARK 465 SER D 248 REMARK 465 GLY D 249 REMARK 465 LYS D 291 REMARK 465 GLY D 292 REMARK 465 ARG D 293 REMARK 465 LYS D 294 REMARK 465 SER D 295 REMARK 465 MET G 1 REMARK 465 ARG G 19 REMARK 465 ALA G 20 REMARK 465 LEU G 21 REMARK 465 VAL G 22 REMARK 465 PHE G 23 REMARK 465 GLY G 24 REMARK 465 GLY G 25 REMARK 465 CYS G 26 REMARK 465 GLU G 41 REMARK 465 SER G 42 REMARK 465 SER G 43 REMARK 465 ALA G 44 REMARK 465 TYR G 45 REMARK 465 ARG G 46 REMARK 465 SER G 61 REMARK 465 PRO G 62 REMARK 465 LEU G 63 REMARK 465 PRO G 64 REMARK 465 GLY G 65 REMARK 465 ALA G 66 REMARK 465 GLN G 67 REMARK 465 PRO G 68 REMARK 465 GLN G 69 REMARK 465 GLN G 70 REMARK 465 GLU G 71 REMARK 465 PRO G 72 REMARK 465 LEU G 73 REMARK 465 ALA G 74 REMARK 465 PRO G 108 REMARK 465 ARG G 109 REMARK 465 LEU G 110 REMARK 465 LEU G 201 REMARK 465 GLN G 202 REMARK 465 GLN G 203 REMARK 465 HIS G 204 REMARK 465 ARG G 205 REMARK 465 PRO G 206 REMARK 465 SER G 207 REMARK 465 PRO G 208 REMARK 465 GLU G 209 REMARK 465 LEU G 210 REMARK 465 THR G 211 REMARK 465 LEU G 212 REMARK 465 SER G 213 REMARK 465 GLN G 214 REMARK 465 LYS G 215 REMARK 465 ILE G 216 REMARK 465 ARG G 217 REMARK 465 THR G 218 REMARK 465 LYS G 219 REMARK 465 LEU G 220 REMARK 465 GLN G 221 REMARK 465 ASN G 222 REMARK 465 GLY G 240 REMARK 465 GLY G 241 REMARK 465 ARG G 242 REMARK 465 GLY G 243 REMARK 465 TYR G 244 REMARK 465 GLY G 245 REMARK 465 SER G 246 REMARK 465 GLU G 247 REMARK 465 SER G 248 REMARK 465 PRO G 290 REMARK 465 LYS G 291 REMARK 465 GLY G 292 REMARK 465 ARG G 293 REMARK 465 LYS G 294 REMARK 465 SER G 295 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO D 108 CB CG CD REMARK 470 GLU D 251 CG CD OE1 OE2 REMARK 470 ASP D 252 CB CG OD1 OD2 REMARK 470 PHE D 253 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 ALA D 254 CB REMARK 470 ALA D 258 CB REMARK 470 PRO D 266 CG CD REMARK 470 GLN G 12 CB CG CD OE1 NE2 REMARK 470 GLU G 16 CB CG CD OE1 OE2 REMARK 470 CYS G 18 CB SG REMARK 470 VAL G 27 CG1 CG2 REMARK 470 ARG G 34 CG CD NE CZ NH1 NH2 REMARK 470 VAL G 38 CG1 CG2 REMARK 470 PRO G 39 CG CD REMARK 470 ILE G 47 CG1 CG2 CD1 REMARK 470 SER G 48 CB OG REMARK 470 SER G 50 CB OG REMARK 470 GLU G 55 CG CD OE1 OE2 REMARK 470 LEU G 56 CG CD1 CD2 REMARK 470 ARG G 57 CG CD NE CZ NH1 NH2 REMARK 470 LEU G 58 CB CG CD1 CD2 REMARK 470 ILE G 59 CG1 CG2 CD1 REMARK 470 LEU G 60 CB CG CD1 CD2 REMARK 470 LEU G 75 CB CG CD1 CD2 REMARK 470 VAL G 76 CG1 CG2 REMARK 470 GLN G 86 CG CD OE1 NE2 REMARK 470 LEU G 87 CG CD1 CD2 REMARK 470 VAL G 88 CG1 CG2 REMARK 470 PRO G 89 CB CG CD REMARK 470 ARG G 90 CG CD NE CZ NH1 NH2 REMARK 470 GLU G 91 CB CG CD OE1 OE2 REMARK 470 GLU G 92 CB CG CD OE1 OE2 REMARK 470 PRO G 94 CG CD REMARK 470 THR G 103 CG2 REMARK 470 ALA G 104 CB REMARK 470 PRO G 106 CB CG CD REMARK 470 ARG G 122 CG CD NE CZ NH1 NH2 REMARK 470 LEU G 125 CB CG CD1 CD2 REMARK 470 TRP G 129 CB CG CD1 CD2 NE1 CE2 CE3 REMARK 470 TRP G 129 CZ2 CZ3 CH2 REMARK 470 GLN G 139 CG CD OE1 NE2 REMARK 470 TYR G 141 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR G 141 OH REMARK 470 GLN G 142 CB CG CD OE1 NE2 REMARK 470 ASN G 147 CG OD1 ND2 REMARK 470 LEU G 149 CB CG CD1 CD2 REMARK 470 ARG G 150 CB CG CD NE CZ NH1 NH2 REMARK 470 ASN G 151 CB CG OD1 ND2 REMARK 470 LEU G 152 CB CG CD1 CD2 REMARK 470 ALA G 153 CB REMARK 470 ASP G 154 CG OD1 OD2 REMARK 470 LYS G 155 CB CG CD CE NZ REMARK 470 ALA G 156 CB REMARK 470 PHE G 157 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG G 159 CB CG CD NE CZ NH1 NH2 REMARK 470 LEU G 165 CB CG CD1 CD2 REMARK 470 PHE G 170 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE G 174 CD1 REMARK 470 TYR G 184 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU G 192 CB CG CD OE1 OE2 REMARK 470 ALA G 194 CB REMARK 470 ARG G 195 CB CG CD NE CZ NH1 NH2 REMARK 470 VAL G 197 CB CG1 CG2 REMARK 470 LEU G 198 CB CG CD1 CD2 REMARK 470 GLU G 199 CB CG CD OE1 OE2 REMARK 470 LEU G 226 CG CD1 CD2 REMARK 470 GLU G 250 CB CG CD OE1 OE2 REMARK 470 PHE G 253 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER G 269 OG REMARK 470 SER G 270 CB OG REMARK 470 LEU G 271 CB CG CD1 CD2 REMARK 470 GLN G 272 CG CD OE1 NE2 REMARK 470 THR G 278 OG1 CG2 REMARK 470 TRP G 280 CE3 CZ2 CZ3 CH2 REMARK 470 GLN G 282 CG CD OE1 NE2 REMARK 470 PRO G 285 CB CG CD REMARK 470 PRO G 287 CG CD REMARK 470 LEU G 288 CG CD1 CD2 REMARK 470 ALA G 289 CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 143 O HOH A 401 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 92 CD GLU A 92 OE1 0.201 REMARK 500 GLU A 92 CD GLU A 92 OE2 0.171 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 92 OE1 - CD - OE2 ANGL. DEV. = 7.5 DEGREES REMARK 500 DG E 8 O5' - P - OP1 ANGL. DEV. = -14.7 DEGREES REMARK 500 DG E 8 O5' - P - OP2 ANGL. DEV. = 8.8 DEGREES REMARK 500 DG H 8 O5' - P - OP1 ANGL. DEV. = -9.3 DEGREES REMARK 500 DG H 8 O5' - P - OP2 ANGL. DEV. = 7.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 44 105.02 -161.20 REMARK 500 SER A 82 21.59 -141.43 REMARK 500 GLU A 140 47.26 -140.12 REMARK 500 ASN A 172 109.30 -57.63 REMARK 500 CYS A 262 -58.78 -124.25 REMARK 500 ALA D 44 105.03 -160.01 REMARK 500 SER D 82 21.99 -143.04 REMARK 500 ASN D 172 109.77 -59.14 REMARK 500 ALA D 200 27.56 -74.16 REMARK 500 CYS D 262 -59.33 -124.09 REMARK 500 SER G 82 22.30 -143.63 REMARK 500 CYS G 262 -58.36 -124.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO G 105 PRO G 106 63.38 REMARK 500 REMARK 500 REMARK: NULL DBREF 6LWD A 1 295 UNP Q96FI4 NEIL1_HUMAN 1 295 DBREF 6LWD B 1 13 PDB 6LWD 6LWD 1 13 DBREF 6LWD C 1 13 PDB 6LWD 6LWD 1 13 DBREF 6LWD D 1 295 UNP Q96FI4 NEIL1_HUMAN 1 295 DBREF 6LWD E 1 13 PDB 6LWD 6LWD 1 13 DBREF 6LWD F 1 13 PDB 6LWD 6LWD 1 13 DBREF 6LWD G 1 295 UNP Q96FI4 NEIL1_HUMAN 1 295 DBREF 6LWD H 1 13 PDB 6LWD 6LWD 1 13 DBREF 6LWD I 1 13 PDB 6LWD 6LWD 1 13 SEQADV 6LWD GLY A 2 UNP Q96FI4 PRO 2 ENGINEERED MUTATION SEQADV 6LWD GLN A 3 UNP Q96FI4 GLU 3 ENGINEERED MUTATION SEQADV 6LWD ARG A 242 UNP Q96FI4 LYS 242 VARIANT SEQADV 6LWD GLY D 2 UNP Q96FI4 PRO 2 ENGINEERED MUTATION SEQADV 6LWD GLN D 3 UNP Q96FI4 GLU 3 ENGINEERED MUTATION SEQADV 6LWD ARG D 242 UNP Q96FI4 LYS 242 VARIANT SEQADV 6LWD GLY G 2 UNP Q96FI4 PRO 2 ENGINEERED MUTATION SEQADV 6LWD GLN G 3 UNP Q96FI4 GLU 3 ENGINEERED MUTATION SEQADV 6LWD ARG G 242 UNP Q96FI4 LYS 242 VARIANT SEQRES 1 A 295 MET GLY GLN GLY PRO GLU LEU HIS LEU ALA SER GLN PHE SEQRES 2 A 295 VAL ASN GLU ALA CYS ARG ALA LEU VAL PHE GLY GLY CYS SEQRES 3 A 295 VAL GLU LYS SER SER VAL SER ARG ASN PRO GLU VAL PRO SEQRES 4 A 295 PHE GLU SER SER ALA TYR ARG ILE SER ALA SER ALA ARG SEQRES 5 A 295 GLY LYS GLU LEU ARG LEU ILE LEU SER PRO LEU PRO GLY SEQRES 6 A 295 ALA GLN PRO GLN GLN GLU PRO LEU ALA LEU VAL PHE ARG SEQRES 7 A 295 PHE GLY MET SER GLY SER PHE GLN LEU VAL PRO ARG GLU SEQRES 8 A 295 GLU LEU PRO ARG HIS ALA HIS LEU ARG PHE TYR THR ALA SEQRES 9 A 295 PRO PRO GLY PRO ARG LEU ALA LEU CYS PHE VAL ASP ILE SEQRES 10 A 295 ARG ARG PHE GLY ARG TRP ASP LEU GLY GLY LYS TRP GLN SEQRES 11 A 295 PRO GLY ARG GLY PRO CYS VAL LEU GLN GLU TYR GLN GLN SEQRES 12 A 295 PHE ARG GLU ASN VAL LEU ARG ASN LEU ALA ASP LYS ALA SEQRES 13 A 295 PHE ASP ARG PRO ILE CYS GLU ALA LEU LEU ASP GLN ARG SEQRES 14 A 295 PHE PHE ASN GLY ILE GLY ASN TYR LEU ARG ALA GLU ILE SEQRES 15 A 295 LEU TYR ARG LEU LYS ILE PRO PRO PHE GLU LYS ALA ARG SEQRES 16 A 295 SER VAL LEU GLU ALA LEU GLN GLN HIS ARG PRO SER PRO SEQRES 17 A 295 GLU LEU THR LEU SER GLN LYS ILE ARG THR LYS LEU GLN SEQRES 18 A 295 ASN PRO ASP LEU LEU GLU LEU CYS HIS SER VAL PRO LYS SEQRES 19 A 295 GLU VAL VAL GLN LEU GLY GLY ARG GLY TYR GLY SER GLU SEQRES 20 A 295 SER GLY GLU GLU ASP PHE ALA ALA PHE ARG ALA TRP LEU SEQRES 21 A 295 ARG CYS TYR GLY MET PRO GLY MET SER SER LEU GLN ASP SEQRES 22 A 295 ARG HIS GLY ARG THR ILE TRP PHE GLN GLY ASP PRO GLY SEQRES 23 A 295 PRO LEU ALA PRO LYS GLY ARG LYS SER SEQRES 1 B 13 DC DG DT DC DC DA EWC DG DT DC DT DA DC SEQRES 1 C 13 DT DA DG DA DC DC DT DG DG DA DC DG DG SEQRES 1 D 295 MET GLY GLN GLY PRO GLU LEU HIS LEU ALA SER GLN PHE SEQRES 2 D 295 VAL ASN GLU ALA CYS ARG ALA LEU VAL PHE GLY GLY CYS SEQRES 3 D 295 VAL GLU LYS SER SER VAL SER ARG ASN PRO GLU VAL PRO SEQRES 4 D 295 PHE GLU SER SER ALA TYR ARG ILE SER ALA SER ALA ARG SEQRES 5 D 295 GLY LYS GLU LEU ARG LEU ILE LEU SER PRO LEU PRO GLY SEQRES 6 D 295 ALA GLN PRO GLN GLN GLU PRO LEU ALA LEU VAL PHE ARG SEQRES 7 D 295 PHE GLY MET SER GLY SER PHE GLN LEU VAL PRO ARG GLU SEQRES 8 D 295 GLU LEU PRO ARG HIS ALA HIS LEU ARG PHE TYR THR ALA SEQRES 9 D 295 PRO PRO GLY PRO ARG LEU ALA LEU CYS PHE VAL ASP ILE SEQRES 10 D 295 ARG ARG PHE GLY ARG TRP ASP LEU GLY GLY LYS TRP GLN SEQRES 11 D 295 PRO GLY ARG GLY PRO CYS VAL LEU GLN GLU TYR GLN GLN SEQRES 12 D 295 PHE ARG GLU ASN VAL LEU ARG ASN LEU ALA ASP LYS ALA SEQRES 13 D 295 PHE ASP ARG PRO ILE CYS GLU ALA LEU LEU ASP GLN ARG SEQRES 14 D 295 PHE PHE ASN GLY ILE GLY ASN TYR LEU ARG ALA GLU ILE SEQRES 15 D 295 LEU TYR ARG LEU LYS ILE PRO PRO PHE GLU LYS ALA ARG SEQRES 16 D 295 SER VAL LEU GLU ALA LEU GLN GLN HIS ARG PRO SER PRO SEQRES 17 D 295 GLU LEU THR LEU SER GLN LYS ILE ARG THR LYS LEU GLN SEQRES 18 D 295 ASN PRO ASP LEU LEU GLU LEU CYS HIS SER VAL PRO LYS SEQRES 19 D 295 GLU VAL VAL GLN LEU GLY GLY ARG GLY TYR GLY SER GLU SEQRES 20 D 295 SER GLY GLU GLU ASP PHE ALA ALA PHE ARG ALA TRP LEU SEQRES 21 D 295 ARG CYS TYR GLY MET PRO GLY MET SER SER LEU GLN ASP SEQRES 22 D 295 ARG HIS GLY ARG THR ILE TRP PHE GLN GLY ASP PRO GLY SEQRES 23 D 295 PRO LEU ALA PRO LYS GLY ARG LYS SER SEQRES 1 E 13 DC DG DT DC DC DA EWC DG DT DC DT DA DC SEQRES 1 F 13 DT DA DG DA DC DC DT DG DG DA DC DG DG SEQRES 1 G 295 MET GLY GLN GLY PRO GLU LEU HIS LEU ALA SER GLN PHE SEQRES 2 G 295 VAL ASN GLU ALA CYS ARG ALA LEU VAL PHE GLY GLY CYS SEQRES 3 G 295 VAL GLU LYS SER SER VAL SER ARG ASN PRO GLU VAL PRO SEQRES 4 G 295 PHE GLU SER SER ALA TYR ARG ILE SER ALA SER ALA ARG SEQRES 5 G 295 GLY LYS GLU LEU ARG LEU ILE LEU SER PRO LEU PRO GLY SEQRES 6 G 295 ALA GLN PRO GLN GLN GLU PRO LEU ALA LEU VAL PHE ARG SEQRES 7 G 295 PHE GLY MET SER GLY SER PHE GLN LEU VAL PRO ARG GLU SEQRES 8 G 295 GLU LEU PRO ARG HIS ALA HIS LEU ARG PHE TYR THR ALA SEQRES 9 G 295 PRO PRO GLY PRO ARG LEU ALA LEU CYS PHE VAL ASP ILE SEQRES 10 G 295 ARG ARG PHE GLY ARG TRP ASP LEU GLY GLY LYS TRP GLN SEQRES 11 G 295 PRO GLY ARG GLY PRO CYS VAL LEU GLN GLU TYR GLN GLN SEQRES 12 G 295 PHE ARG GLU ASN VAL LEU ARG ASN LEU ALA ASP LYS ALA SEQRES 13 G 295 PHE ASP ARG PRO ILE CYS GLU ALA LEU LEU ASP GLN ARG SEQRES 14 G 295 PHE PHE ASN GLY ILE GLY ASN TYR LEU ARG ALA GLU ILE SEQRES 15 G 295 LEU TYR ARG LEU LYS ILE PRO PRO PHE GLU LYS ALA ARG SEQRES 16 G 295 SER VAL LEU GLU ALA LEU GLN GLN HIS ARG PRO SER PRO SEQRES 17 G 295 GLU LEU THR LEU SER GLN LYS ILE ARG THR LYS LEU GLN SEQRES 18 G 295 ASN PRO ASP LEU LEU GLU LEU CYS HIS SER VAL PRO LYS SEQRES 19 G 295 GLU VAL VAL GLN LEU GLY GLY ARG GLY TYR GLY SER GLU SEQRES 20 G 295 SER GLY GLU GLU ASP PHE ALA ALA PHE ARG ALA TRP LEU SEQRES 21 G 295 ARG CYS TYR GLY MET PRO GLY MET SER SER LEU GLN ASP SEQRES 22 G 295 ARG HIS GLY ARG THR ILE TRP PHE GLN GLY ASP PRO GLY SEQRES 23 G 295 PRO LEU ALA PRO LYS GLY ARG LYS SER SEQRES 1 H 13 DC DG DT DC DC DA EWC DG DT DC DT DA DC SEQRES 1 I 13 DT DA DG DA DC DC DT DG DG DA DC DG DG HET EWC B 7 24 HET EWC E 7 24 HET EWC H 7 24 HET GOL A 301 6 HETNAM EWC [(2~{R},3~{S},5~{R})-5-[(5~{S})-7-AZANYL-2,4,9- HETNAM 2 EWC TRIS(OXIDANYLIDENE)-1,3,6,8-TETRAZASPIRO[4.4]NON-7-EN- HETNAM 3 EWC 1-YL]-3-OXIDANYL-OXOLAN-2-YL]METHYL DIHYDROGEN HETNAM 4 EWC PHOSPHATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 EWC 3(C10 H14 N5 O9 P) FORMUL 10 GOL C3 H8 O3 FORMUL 11 HOH *294(H2 O) HELIX 1 AA1 GLN A 3 CYS A 18 1 16 HELIX 2 AA2 GLU A 140 ARG A 150 1 11 HELIX 3 AA3 ASP A 154 ARG A 159 5 6 HELIX 4 AA4 PRO A 160 LEU A 165 1 6 HELIX 5 AA5 GLY A 175 LEU A 186 1 12 HELIX 6 AA6 LYS A 193 ALA A 200 1 8 HELIX 7 AA7 ASP A 224 GLY A 240 1 17 HELIX 8 AA8 SER A 248 LEU A 260 1 13 HELIX 9 AA9 GLN D 3 CYS D 18 1 16 HELIX 10 AB1 GLU D 140 ARG D 150 1 11 HELIX 11 AB2 ASP D 154 ARG D 159 5 6 HELIX 12 AB3 PRO D 160 LEU D 165 1 6 HELIX 13 AB4 GLY D 175 LEU D 186 1 12 HELIX 14 AB5 LYS D 193 ALA D 200 1 8 HELIX 15 AB6 ASP D 224 GLY D 240 1 17 HELIX 16 AB7 GLU D 251 LEU D 260 1 10 HELIX 17 AB8 GLN G 3 CYS G 18 1 16 HELIX 18 AB9 GLU G 140 ARG G 150 1 11 HELIX 19 AC1 ASP G 154 ARG G 159 5 6 HELIX 20 AC2 PRO G 160 LEU G 165 1 6 HELIX 21 AC3 GLY G 175 LEU G 186 1 12 HELIX 22 AC4 LYS G 193 ALA G 200 1 8 HELIX 23 AC5 ASP G 224 LEU G 239 1 16 HELIX 24 AC6 GLU G 250 LEU G 260 1 11 SHEET 1 AA1 8 GLY A 83 PRO A 89 0 SHEET 2 AA1 8 LEU A 110 ASP A 116 -1 O CYS A 113 N GLN A 86 SHEET 3 AA1 8 ALA A 97 THR A 103 -1 N PHE A 101 O LEU A 112 SHEET 4 AA1 8 PHE A 23 LYS A 29 -1 N GLU A 28 O ARG A 100 SHEET 5 AA1 8 GLU A 41 ARG A 52 -1 O TYR A 45 N PHE A 23 SHEET 6 AA1 8 GLU A 55 PRO A 62 -1 O ARG A 57 N SER A 50 SHEET 7 AA1 8 LEU A 73 ARG A 78 -1 O LEU A 73 N LEU A 60 SHEET 8 AA1 8 ARG A 122 LEU A 125 -1 O ARG A 122 N ARG A 78 SHEET 1 AA2 2 SER A 269 GLN A 272 0 SHEET 2 AA2 2 THR A 278 PHE A 281 -1 O ILE A 279 N LEU A 271 SHEET 1 AA3 5 PHE D 23 CYS D 26 0 SHEET 2 AA3 5 GLU D 41 ARG D 52 -1 O TYR D 45 N PHE D 23 SHEET 3 AA3 5 GLU D 55 PRO D 62 -1 O ARG D 57 N SER D 50 SHEET 4 AA3 5 LEU D 73 ARG D 78 -1 O LEU D 73 N LEU D 60 SHEET 5 AA3 5 ARG D 122 LEU D 125 -1 O ARG D 122 N ARG D 78 SHEET 1 AA4 4 GLU D 28 LYS D 29 0 SHEET 2 AA4 4 ALA D 97 TYR D 102 -1 O ARG D 100 N GLU D 28 SHEET 3 AA4 4 LEU D 110 ASP D 116 -1 O LEU D 112 N PHE D 101 SHEET 4 AA4 4 GLY D 83 PRO D 89 -1 N GLN D 86 O CYS D 113 SHEET 1 AA5 2 SER D 269 GLN D 272 0 SHEET 2 AA5 2 THR D 278 PHE D 281 -1 O ILE D 279 N LEU D 271 SHEET 1 AA6 4 GLU G 28 LYS G 29 0 SHEET 2 AA6 4 ALA G 97 PHE G 101 -1 O ARG G 100 N GLU G 28 SHEET 3 AA6 4 LEU G 112 ASP G 116 -1 O LEU G 112 N PHE G 101 SHEET 4 AA6 4 GLY G 83 LEU G 87 -1 N GLN G 86 O CYS G 113 SHEET 1 AA7 4 SER G 48 ARG G 52 0 SHEET 2 AA7 4 GLU G 55 ILE G 59 -1 O ARG G 57 N SER G 50 SHEET 3 AA7 4 VAL G 76 ARG G 78 -1 O PHE G 77 N LEU G 56 SHEET 4 AA7 4 ARG G 122 ASP G 124 -1 O ARG G 122 N ARG G 78 SHEET 1 AA8 2 SER G 269 GLN G 272 0 SHEET 2 AA8 2 THR G 278 PHE G 281 -1 O ILE G 279 N LEU G 271 LINK O3' DA B 6 P EWC B 7 1555 1555 1.61 LINK O3' EWC B 7 P DG B 8 1555 1555 1.62 LINK O3' DA E 6 P EWC E 7 1555 1555 1.60 LINK O3' EWC E 7 P DG E 8 1555 1555 1.59 LINK O3' DA H 6 P EWC H 7 1555 1555 1.61 LINK O3' EWC H 7 P DG H 8 1555 1555 1.59 CISPEP 1 GLN A 67 PRO A 68 0 -11.71 CISPEP 2 PRO A 105 PRO A 106 0 22.68 CISPEP 3 GLN D 67 PRO D 68 0 -6.46 CISPEP 4 PRO D 105 PRO D 106 0 6.05 CRYST1 73.585 109.307 168.239 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013590 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009149 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005944 0.00000