HEADER DNA BINDING PROTEIN/DNA 07-FEB-20 6LWH TITLE CRYSTAL STRUCTURE OF HUMAN NEIL1(P2G, E3Q, K242) BOUND TO DUPLEX DNA TITLE 2 CONTAINING DIHYDROTHYMINE (DHT) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDONUCLEASE 8-LIKE 1; COMPND 3 CHAIN: A, D, G; COMPND 4 SYNONYM: DNA GLYCOSYLASE/AP LYASE NEIL1,DNA-(APURINIC OR APYRIMIDINIC COMPND 5 SITE) LYASE NEIL1,ENDONUCLEASE VIII-LIKE 1,FPG1,NEI HOMOLOG 1,NEH1, COMPND 6 NEI-LIKE PROTEIN 1; COMPND 7 EC: 3.2.2.-,4.2.99.18; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: DNA (5'-D(*CP*GP*TP*CP*CP*AP*(TDH)P*GP*TP*CP*TP*AP*C)-3'); COMPND 12 CHAIN: B, E, H; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: OLIGO DNA CONTAINING DHT; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: DNA (5'-D(*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*G)-3'); COMPND 17 CHAIN: C, F, I; COMPND 18 ENGINEERED: YES; COMPND 19 OTHER_DETAILS: COMPLEMENTARY STRAND SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NEIL1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 11 ORGANISM_TAXID: 562; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 15 ORGANISM_TAXID: 562 KEYWDS BASE LESION, OXIDATIVE DNA DAMAGE, DNA REPAIR, DNA BINDING PROTEIN- KEYWDS 2 DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.H.LIU,J.ZHANG,C.X.ZHU,X.X.ZHANG,Y.Q.GAO,C.Q.YI REVDAT 4 29-NOV-23 6LWH 1 REMARK REVDAT 3 22-JUN-22 6LWH 1 SEQRES REVDAT 2 14-JUL-21 6LWH 1 JRNL REVDAT 1 09-JUN-21 6LWH 0 JRNL AUTH M.LIU,J.ZHANG,C.ZHU,X.ZHANG,W.XIAO,Y.YAN,L.LIU,H.ZENG, JRNL AUTH 2 Y.Q.GAO,C.YI JRNL TITL DNA REPAIR GLYCOSYLASE HNEIL1 TRIAGES DAMAGED BASES VIA JRNL TITL 2 COMPETING INTERACTION MODES. JRNL REF NAT COMMUN V. 12 4108 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 34226550 JRNL DOI 10.1038/S41467-021-24431-Y REMARK 2 REMARK 2 RESOLUTION. 2.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.41 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 33122 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1766 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.78 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2375 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.2860 REMARK 3 BIN FREE R VALUE SET COUNT : 130 REMARK 3 BIN FREE R VALUE : 0.3590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5781 REMARK 3 NUCLEIC ACID ATOMS : 1575 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 153 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 80.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.28000 REMARK 3 B22 (A**2) : -1.13000 REMARK 3 B33 (A**2) : 5.42000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.924 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.327 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.264 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 27.061 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7750 ; 0.009 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 6439 ; 0.002 ; 0.018 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10777 ; 1.627 ; 1.543 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14834 ; 1.374 ; 1.781 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 749 ;12.152 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 353 ;34.366 ;19.972 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 922 ;17.262 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 66 ;23.259 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 918 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7876 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1919 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 290 REMARK 3 ORIGIN FOR THE GROUP (A): 82.143 226.254 203.099 REMARK 3 T TENSOR REMARK 3 T11: 0.0492 T22: 0.0238 REMARK 3 T33: 0.1437 T12: -0.0005 REMARK 3 T13: -0.0682 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 3.1604 L22: 6.0706 REMARK 3 L33: 1.3670 L12: 2.0907 REMARK 3 L13: -0.3587 L23: -1.8151 REMARK 3 S TENSOR REMARK 3 S11: -0.2063 S12: 0.1005 S13: -0.0387 REMARK 3 S21: -0.3571 S22: 0.2503 S23: 0.4937 REMARK 3 S31: 0.0163 S32: -0.0696 S33: -0.0440 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 13 REMARK 3 ORIGIN FOR THE GROUP (A): 74.755 233.016 187.158 REMARK 3 T TENSOR REMARK 3 T11: 0.4757 T22: 0.6882 REMARK 3 T33: 0.4688 T12: 0.1020 REMARK 3 T13: -0.1819 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 8.5944 L22: 2.9912 REMARK 3 L33: 1.3958 L12: -2.2218 REMARK 3 L13: 3.3016 L23: -1.1199 REMARK 3 S TENSOR REMARK 3 S11: 0.4736 S12: 1.3455 S13: -0.1622 REMARK 3 S21: -1.0438 S22: -0.3320 S23: 0.3083 REMARK 3 S31: 0.2701 S32: 0.3000 S33: -0.1416 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 13 REMARK 3 ORIGIN FOR THE GROUP (A): 69.754 235.658 187.657 REMARK 3 T TENSOR REMARK 3 T11: 0.4623 T22: 0.3921 REMARK 3 T33: 0.5331 T12: -0.0263 REMARK 3 T13: -0.3089 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 4.6801 L22: 9.3429 REMARK 3 L33: 4.1006 L12: -0.6289 REMARK 3 L13: 0.8981 L23: -3.0493 REMARK 3 S TENSOR REMARK 3 S11: 0.0755 S12: -0.1818 S13: 0.2126 REMARK 3 S21: -0.4975 S22: 0.2760 S23: 0.0188 REMARK 3 S31: -0.2222 S32: 0.5013 S33: -0.3515 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 2 D 290 REMARK 3 ORIGIN FOR THE GROUP (A): 103.124 209.581 218.838 REMARK 3 T TENSOR REMARK 3 T11: 0.0735 T22: 0.0386 REMARK 3 T33: 0.0695 T12: 0.0247 REMARK 3 T13: -0.0242 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 5.0724 L22: 4.1477 REMARK 3 L33: 4.0006 L12: -2.4790 REMARK 3 L13: -0.1117 L23: 0.5204 REMARK 3 S TENSOR REMARK 3 S11: -0.1404 S12: -0.1911 S13: 0.3877 REMARK 3 S21: 0.2700 S22: 0.1999 S23: -0.1809 REMARK 3 S31: -0.2395 S32: 0.0766 S33: -0.0595 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 13 REMARK 3 ORIGIN FOR THE GROUP (A): 109.439 200.228 233.341 REMARK 3 T TENSOR REMARK 3 T11: 0.3742 T22: 0.3475 REMARK 3 T33: 0.2046 T12: 0.1292 REMARK 3 T13: -0.0582 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 8.7909 L22: 3.2219 REMARK 3 L33: 4.5461 L12: 0.9913 REMARK 3 L13: 2.4403 L23: -0.4672 REMARK 3 S TENSOR REMARK 3 S11: -0.1847 S12: -0.8762 S13: -0.3787 REMARK 3 S21: 0.5405 S22: 0.2515 S23: -0.2893 REMARK 3 S31: 0.4624 S32: 0.1056 S33: -0.0668 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 1 F 13 REMARK 3 ORIGIN FOR THE GROUP (A): 114.065 202.189 235.689 REMARK 3 T TENSOR REMARK 3 T11: 0.4073 T22: 0.3015 REMARK 3 T33: 0.2850 T12: 0.1844 REMARK 3 T13: -0.2161 T23: -0.0864 REMARK 3 L TENSOR REMARK 3 L11: 8.4412 L22: 3.2381 REMARK 3 L33: 12.1027 L12: -0.3625 REMARK 3 L13: -3.3028 L23: 1.6233 REMARK 3 S TENSOR REMARK 3 S11: -0.1371 S12: -0.8371 S13: 0.1582 REMARK 3 S21: 0.8603 S22: 0.2694 S23: -0.0525 REMARK 3 S31: -0.0010 S32: 0.1088 S33: -0.1323 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 2 G 289 REMARK 3 ORIGIN FOR THE GROUP (A): 115.604 207.810 171.130 REMARK 3 T TENSOR REMARK 3 T11: 0.7711 T22: 0.5201 REMARK 3 T33: 0.3945 T12: 0.1297 REMARK 3 T13: 0.0428 T23: 0.1736 REMARK 3 L TENSOR REMARK 3 L11: 6.1228 L22: 1.9080 REMARK 3 L33: 5.9071 L12: -1.0574 REMARK 3 L13: 3.4789 L23: -0.3931 REMARK 3 S TENSOR REMARK 3 S11: 0.0872 S12: -0.0166 S13: -0.2853 REMARK 3 S21: -0.1704 S22: -0.0898 S23: 0.0655 REMARK 3 S31: 0.1338 S32: 0.4752 S33: 0.0026 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 1 H 13 REMARK 3 ORIGIN FOR THE GROUP (A): 110.568 223.618 167.162 REMARK 3 T TENSOR REMARK 3 T11: 0.7463 T22: 0.6920 REMARK 3 T33: 0.4227 T12: 0.0121 REMARK 3 T13: -0.0022 T23: 0.0725 REMARK 3 L TENSOR REMARK 3 L11: 7.8879 L22: 0.8502 REMARK 3 L33: 4.2928 L12: 0.5428 REMARK 3 L13: -0.8987 L23: -0.0645 REMARK 3 S TENSOR REMARK 3 S11: 0.0131 S12: 0.1320 S13: 0.9208 REMARK 3 S21: -0.2979 S22: 0.0409 S23: -0.1451 REMARK 3 S31: -0.1857 S32: 0.1754 S33: -0.0540 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : I 1 I 13 REMARK 3 ORIGIN FOR THE GROUP (A): 105.999 225.047 169.607 REMARK 3 T TENSOR REMARK 3 T11: 0.6863 T22: 0.6536 REMARK 3 T33: 0.3621 T12: 0.1131 REMARK 3 T13: -0.0659 T23: 0.0697 REMARK 3 L TENSOR REMARK 3 L11: 9.7940 L22: 4.7448 REMARK 3 L33: 3.4018 L12: -1.7325 REMARK 3 L13: -2.5156 L23: 2.8967 REMARK 3 S TENSOR REMARK 3 S11: -0.1492 S12: -0.3941 S13: 0.3735 REMARK 3 S21: 0.4006 S22: -0.1372 S23: 0.0644 REMARK 3 S31: -0.2651 S32: 0.1398 S33: 0.2864 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6LWH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1300015562. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 130 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34947 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.780 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.62900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5ITY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CACODYLIC ACID (PH 6.5), 0.1 M REMARK 280 NACL, 0.05 M MGCL2 AND 18% (W/V) PEG 8000, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.79650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.02650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.50700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 84.02650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.79650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.50700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 203 REMARK 465 HIS A 204 REMARK 465 ARG A 205 REMARK 465 PRO A 206 REMARK 465 SER A 207 REMARK 465 PRO A 208 REMARK 465 GLU A 209 REMARK 465 LEU A 210 REMARK 465 THR A 211 REMARK 465 LEU A 212 REMARK 465 SER A 213 REMARK 465 GLN A 214 REMARK 465 LYS A 215 REMARK 465 ILE A 216 REMARK 465 ARG A 217 REMARK 465 THR A 218 REMARK 465 LYS A 219 REMARK 465 LEU A 220 REMARK 465 GLN A 221 REMARK 465 GLY A 245 REMARK 465 SER A 246 REMARK 465 GLU A 247 REMARK 465 SER A 248 REMARK 465 LYS A 291 REMARK 465 GLY A 292 REMARK 465 ARG A 293 REMARK 465 LYS A 294 REMARK 465 SER A 295 REMARK 465 MET D 1 REMARK 465 GLN D 203 REMARK 465 HIS D 204 REMARK 465 ARG D 205 REMARK 465 PRO D 206 REMARK 465 SER D 207 REMARK 465 PRO D 208 REMARK 465 GLU D 209 REMARK 465 LEU D 210 REMARK 465 THR D 211 REMARK 465 LEU D 212 REMARK 465 SER D 213 REMARK 465 GLN D 214 REMARK 465 LYS D 215 REMARK 465 ILE D 216 REMARK 465 ARG D 217 REMARK 465 THR D 218 REMARK 465 LYS D 219 REMARK 465 LEU D 220 REMARK 465 GLN D 221 REMARK 465 GLY D 245 REMARK 465 SER D 246 REMARK 465 GLU D 247 REMARK 465 SER D 248 REMARK 465 LYS D 291 REMARK 465 GLY D 292 REMARK 465 ARG D 293 REMARK 465 LYS D 294 REMARK 465 SER D 295 REMARK 465 MET G 1 REMARK 465 ARG G 19 REMARK 465 ALA G 20 REMARK 465 LEU G 21 REMARK 465 VAL G 22 REMARK 465 PHE G 23 REMARK 465 GLU G 41 REMARK 465 SER G 42 REMARK 465 SER G 43 REMARK 465 ALA G 44 REMARK 465 LEU G 63 REMARK 465 PRO G 64 REMARK 465 GLY G 65 REMARK 465 ALA G 66 REMARK 465 GLN G 67 REMARK 465 PRO G 68 REMARK 465 GLN G 69 REMARK 465 GLN G 70 REMARK 465 GLU G 71 REMARK 465 PRO G 72 REMARK 465 LEU G 73 REMARK 465 ALA G 74 REMARK 465 LEU G 75 REMARK 465 GLY G 107 REMARK 465 PRO G 108 REMARK 465 ARG G 109 REMARK 465 LEU G 110 REMARK 465 GLN G 202 REMARK 465 GLN G 203 REMARK 465 HIS G 204 REMARK 465 ARG G 205 REMARK 465 PRO G 206 REMARK 465 SER G 207 REMARK 465 PRO G 208 REMARK 465 GLU G 209 REMARK 465 LEU G 210 REMARK 465 THR G 211 REMARK 465 LEU G 212 REMARK 465 SER G 213 REMARK 465 GLN G 214 REMARK 465 LYS G 215 REMARK 465 ILE G 216 REMARK 465 ARG G 217 REMARK 465 THR G 218 REMARK 465 LYS G 219 REMARK 465 LEU G 220 REMARK 465 GLN G 221 REMARK 465 ASN G 222 REMARK 465 GLY G 240 REMARK 465 GLY G 241 REMARK 465 LYS G 242 REMARK 465 GLY G 243 REMARK 465 TYR G 244 REMARK 465 GLY G 245 REMARK 465 SER G 246 REMARK 465 GLU G 247 REMARK 465 SER G 248 REMARK 465 GLY G 249 REMARK 465 PRO G 290 REMARK 465 LYS G 291 REMARK 465 GLY G 292 REMARK 465 ARG G 293 REMARK 465 LYS G 294 REMARK 465 SER G 295 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 222 CA CG OD1 ND2 REMARK 470 GLU D 250 CG CD OE1 OE2 REMARK 470 GLN G 12 CB CG CD OE1 NE2 REMARK 470 PHE G 13 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL G 14 CG1 CG2 REMARK 470 GLU G 16 CB CG CD OE1 OE2 REMARK 470 CYS G 18 CB SG REMARK 470 ARG G 34 CG CD NE CZ NH1 NH2 REMARK 470 ASN G 35 CB CG OD1 ND2 REMARK 470 VAL G 38 CG1 CG2 REMARK 470 PHE G 40 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR G 45 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR G 45 OH REMARK 470 ARG G 46 CB CG CD NE CZ NH1 NH2 REMARK 470 ILE G 47 CG1 CG2 CD1 REMARK 470 SER G 48 CB OG REMARK 470 LEU G 56 CB CG CD1 CD2 REMARK 470 ARG G 57 CB CG CD NE CZ NH1 NH2 REMARK 470 LEU G 58 CB CG CD1 CD2 REMARK 470 ILE G 59 CG1 CG2 CD1 REMARK 470 LEU G 60 CB CG CD1 CD2 REMARK 470 SER G 61 CB OG REMARK 470 VAL G 76 CG1 CG2 REMARK 470 PHE G 77 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU G 87 CG CD1 CD2 REMARK 470 VAL G 88 CG1 CG2 REMARK 470 ARG G 90 CG CD NE CZ NH1 NH2 REMARK 470 THR G 103 OG1 CG2 REMARK 470 ALA G 104 CB REMARK 470 ILE G 117 CD1 REMARK 470 LEU G 125 CB CG CD1 CD2 REMARK 470 TRP G 129 CE3 CZ2 CZ3 CH2 REMARK 470 ARG G 133 CG CD NE CZ NH1 NH2 REMARK 470 GLN G 139 CG CD OE1 NE2 REMARK 470 ARG G 145 CB CG CD NE CZ NH1 NH2 REMARK 470 GLU G 146 CB CG CD OE1 OE2 REMARK 470 ASN G 147 CB CG OD1 ND2 REMARK 470 VAL G 148 CB CG1 CG2 REMARK 470 LEU G 149 CB CG CD1 CD2 REMARK 470 ARG G 150 CB CG CD NE CZ NH1 NH2 REMARK 470 LEU G 152 CB CG CD1 CD2 REMARK 470 ALA G 153 CB REMARK 470 LYS G 155 CB CG CD CE NZ REMARK 470 ALA G 156 CB REMARK 470 PHE G 157 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG G 159 CB CG CD NE CZ NH1 NH2 REMARK 470 ILE G 161 CG1 CG2 CD1 REMARK 470 LEU G 165 CB CG CD1 CD2 REMARK 470 LEU G 166 CG CD1 CD2 REMARK 470 PHE G 170 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE G 171 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE G 174 CG1 CG2 CD1 REMARK 470 TYR G 184 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE G 188 CG1 CG2 CD1 REMARK 470 GLU G 192 CB CG CD OE1 OE2 REMARK 470 ALA G 194 CB REMARK 470 ARG G 195 CB CG CD NE CZ NH1 NH2 REMARK 470 VAL G 197 CB CG1 CG2 REMARK 470 LEU G 198 CG CD1 CD2 REMARK 470 GLU G 199 CB CG CD OE1 OE2 REMARK 470 LEU G 226 CG CD1 CD2 REMARK 470 LEU G 228 CG CD1 CD2 REMARK 470 GLU G 250 CB CG CD OE1 OE2 REMARK 470 GLU G 251 CB CG CD OE1 OE2 REMARK 470 ASP G 252 CB CG OD1 OD2 REMARK 470 PHE G 253 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 ALA G 255 CB REMARK 470 LEU G 271 CB CG CD1 CD2 REMARK 470 GLN G 272 CG CD OE1 NE2 REMARK 470 ILE G 279 CD1 REMARK 470 TRP G 280 CE3 CZ2 CZ3 CH2 REMARK 470 GLN G 282 CG CD OE1 NE2 REMARK 470 PRO G 285 CB CG CD REMARK 470 PRO G 287 CB CG CD REMARK 470 LEU G 288 CB CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 143 O HOH A 401 1.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT C 7 O3' DG C 8 P -0.073 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG D 133 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 DG E 8 O5' - P - OP1 ANGL. DEV. = -15.4 DEGREES REMARK 500 DG E 8 O5' - P - OP2 ANGL. DEV. = 9.2 DEGREES REMARK 500 DG H 8 O5' - P - OP1 ANGL. DEV. = -8.6 DEGREES REMARK 500 DG H 8 O5' - P - OP2 ANGL. DEV. = 7.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 82 12.50 -142.26 REMARK 500 ASN A 172 109.65 -52.56 REMARK 500 ALA A 200 37.73 -89.20 REMARK 500 LEU A 201 -9.09 -147.86 REMARK 500 CYS A 262 -59.90 -121.24 REMARK 500 LEU A 288 31.00 -98.63 REMARK 500 SER D 82 13.58 -146.16 REMARK 500 GLU D 92 50.08 -141.17 REMARK 500 ALA D 97 95.62 -69.17 REMARK 500 ASN D 172 109.00 -52.66 REMARK 500 ALA D 200 59.37 -94.33 REMARK 500 LEU D 201 -8.77 -158.85 REMARK 500 CYS D 262 -60.03 -120.96 REMARK 500 SER G 82 13.78 -144.67 REMARK 500 ALA G 97 96.84 -68.44 REMARK 500 ASN G 172 109.76 -54.47 REMARK 500 ALA G 200 47.75 -70.08 REMARK 500 CYS G 262 -58.82 -122.00 REMARK 500 LEU G 288 42.88 -103.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO D 105 PRO D 106 -30.86 REMARK 500 PRO G 105 PRO G 106 -96.79 REMARK 500 REMARK 500 REMARK: NULL DBREF 6LWH A 1 295 UNP Q96FI4 NEIL1_HUMAN 1 295 DBREF 6LWH B 1 13 PDB 6LWH 6LWH 1 13 DBREF 6LWH C 1 13 PDB 6LWH 6LWH 1 13 DBREF 6LWH D 1 295 UNP Q96FI4 NEIL1_HUMAN 1 295 DBREF 6LWH E 1 13 PDB 6LWH 6LWH 1 13 DBREF 6LWH F 1 13 PDB 6LWH 6LWH 1 13 DBREF 6LWH G 1 295 UNP Q96FI4 NEIL1_HUMAN 1 295 DBREF 6LWH H 1 13 PDB 6LWH 6LWH 1 13 DBREF 6LWH I 1 13 PDB 6LWH 6LWH 1 13 SEQADV 6LWH GLY A 2 UNP Q96FI4 PRO 2 ENGINEERED MUTATION SEQADV 6LWH GLN A 3 UNP Q96FI4 GLU 3 ENGINEERED MUTATION SEQADV 6LWH GLY D 2 UNP Q96FI4 PRO 2 ENGINEERED MUTATION SEQADV 6LWH GLN D 3 UNP Q96FI4 GLU 3 ENGINEERED MUTATION SEQADV 6LWH GLY G 2 UNP Q96FI4 PRO 2 ENGINEERED MUTATION SEQADV 6LWH GLN G 3 UNP Q96FI4 GLU 3 ENGINEERED MUTATION SEQRES 1 A 295 MET GLY GLN GLY PRO GLU LEU HIS LEU ALA SER GLN PHE SEQRES 2 A 295 VAL ASN GLU ALA CYS ARG ALA LEU VAL PHE GLY GLY CYS SEQRES 3 A 295 VAL GLU LYS SER SER VAL SER ARG ASN PRO GLU VAL PRO SEQRES 4 A 295 PHE GLU SER SER ALA TYR ARG ILE SER ALA SER ALA ARG SEQRES 5 A 295 GLY LYS GLU LEU ARG LEU ILE LEU SER PRO LEU PRO GLY SEQRES 6 A 295 ALA GLN PRO GLN GLN GLU PRO LEU ALA LEU VAL PHE ARG SEQRES 7 A 295 PHE GLY MET SER GLY SER PHE GLN LEU VAL PRO ARG GLU SEQRES 8 A 295 GLU LEU PRO ARG HIS ALA HIS LEU ARG PHE TYR THR ALA SEQRES 9 A 295 PRO PRO GLY PRO ARG LEU ALA LEU CYS PHE VAL ASP ILE SEQRES 10 A 295 ARG ARG PHE GLY ARG TRP ASP LEU GLY GLY LYS TRP GLN SEQRES 11 A 295 PRO GLY ARG GLY PRO CYS VAL LEU GLN GLU TYR GLN GLN SEQRES 12 A 295 PHE ARG GLU ASN VAL LEU ARG ASN LEU ALA ASP LYS ALA SEQRES 13 A 295 PHE ASP ARG PRO ILE CYS GLU ALA LEU LEU ASP GLN ARG SEQRES 14 A 295 PHE PHE ASN GLY ILE GLY ASN TYR LEU ARG ALA GLU ILE SEQRES 15 A 295 LEU TYR ARG LEU LYS ILE PRO PRO PHE GLU LYS ALA ARG SEQRES 16 A 295 SER VAL LEU GLU ALA LEU GLN GLN HIS ARG PRO SER PRO SEQRES 17 A 295 GLU LEU THR LEU SER GLN LYS ILE ARG THR LYS LEU GLN SEQRES 18 A 295 ASN PRO ASP LEU LEU GLU LEU CYS HIS SER VAL PRO LYS SEQRES 19 A 295 GLU VAL VAL GLN LEU GLY GLY LYS GLY TYR GLY SER GLU SEQRES 20 A 295 SER GLY GLU GLU ASP PHE ALA ALA PHE ARG ALA TRP LEU SEQRES 21 A 295 ARG CYS TYR GLY MET PRO GLY MET SER SER LEU GLN ASP SEQRES 22 A 295 ARG HIS GLY ARG THR ILE TRP PHE GLN GLY ASP PRO GLY SEQRES 23 A 295 PRO LEU ALA PRO LYS GLY ARG LYS SER SEQRES 1 B 13 DC DG DT DC DC DA QBT DG DT DC DT DA DC SEQRES 1 C 13 DT DA DG DA DC DC DT DG DG DA DC DG DG SEQRES 1 D 295 MET GLY GLN GLY PRO GLU LEU HIS LEU ALA SER GLN PHE SEQRES 2 D 295 VAL ASN GLU ALA CYS ARG ALA LEU VAL PHE GLY GLY CYS SEQRES 3 D 295 VAL GLU LYS SER SER VAL SER ARG ASN PRO GLU VAL PRO SEQRES 4 D 295 PHE GLU SER SER ALA TYR ARG ILE SER ALA SER ALA ARG SEQRES 5 D 295 GLY LYS GLU LEU ARG LEU ILE LEU SER PRO LEU PRO GLY SEQRES 6 D 295 ALA GLN PRO GLN GLN GLU PRO LEU ALA LEU VAL PHE ARG SEQRES 7 D 295 PHE GLY MET SER GLY SER PHE GLN LEU VAL PRO ARG GLU SEQRES 8 D 295 GLU LEU PRO ARG HIS ALA HIS LEU ARG PHE TYR THR ALA SEQRES 9 D 295 PRO PRO GLY PRO ARG LEU ALA LEU CYS PHE VAL ASP ILE SEQRES 10 D 295 ARG ARG PHE GLY ARG TRP ASP LEU GLY GLY LYS TRP GLN SEQRES 11 D 295 PRO GLY ARG GLY PRO CYS VAL LEU GLN GLU TYR GLN GLN SEQRES 12 D 295 PHE ARG GLU ASN VAL LEU ARG ASN LEU ALA ASP LYS ALA SEQRES 13 D 295 PHE ASP ARG PRO ILE CYS GLU ALA LEU LEU ASP GLN ARG SEQRES 14 D 295 PHE PHE ASN GLY ILE GLY ASN TYR LEU ARG ALA GLU ILE SEQRES 15 D 295 LEU TYR ARG LEU LYS ILE PRO PRO PHE GLU LYS ALA ARG SEQRES 16 D 295 SER VAL LEU GLU ALA LEU GLN GLN HIS ARG PRO SER PRO SEQRES 17 D 295 GLU LEU THR LEU SER GLN LYS ILE ARG THR LYS LEU GLN SEQRES 18 D 295 ASN PRO ASP LEU LEU GLU LEU CYS HIS SER VAL PRO LYS SEQRES 19 D 295 GLU VAL VAL GLN LEU GLY GLY LYS GLY TYR GLY SER GLU SEQRES 20 D 295 SER GLY GLU GLU ASP PHE ALA ALA PHE ARG ALA TRP LEU SEQRES 21 D 295 ARG CYS TYR GLY MET PRO GLY MET SER SER LEU GLN ASP SEQRES 22 D 295 ARG HIS GLY ARG THR ILE TRP PHE GLN GLY ASP PRO GLY SEQRES 23 D 295 PRO LEU ALA PRO LYS GLY ARG LYS SER SEQRES 1 E 13 DC DG DT DC DC DA QBT DG DT DC DT DA DC SEQRES 1 F 13 DT DA DG DA DC DC DT DG DG DA DC DG DG SEQRES 1 G 295 MET GLY GLN GLY PRO GLU LEU HIS LEU ALA SER GLN PHE SEQRES 2 G 295 VAL ASN GLU ALA CYS ARG ALA LEU VAL PHE GLY GLY CYS SEQRES 3 G 295 VAL GLU LYS SER SER VAL SER ARG ASN PRO GLU VAL PRO SEQRES 4 G 295 PHE GLU SER SER ALA TYR ARG ILE SER ALA SER ALA ARG SEQRES 5 G 295 GLY LYS GLU LEU ARG LEU ILE LEU SER PRO LEU PRO GLY SEQRES 6 G 295 ALA GLN PRO GLN GLN GLU PRO LEU ALA LEU VAL PHE ARG SEQRES 7 G 295 PHE GLY MET SER GLY SER PHE GLN LEU VAL PRO ARG GLU SEQRES 8 G 295 GLU LEU PRO ARG HIS ALA HIS LEU ARG PHE TYR THR ALA SEQRES 9 G 295 PRO PRO GLY PRO ARG LEU ALA LEU CYS PHE VAL ASP ILE SEQRES 10 G 295 ARG ARG PHE GLY ARG TRP ASP LEU GLY GLY LYS TRP GLN SEQRES 11 G 295 PRO GLY ARG GLY PRO CYS VAL LEU GLN GLU TYR GLN GLN SEQRES 12 G 295 PHE ARG GLU ASN VAL LEU ARG ASN LEU ALA ASP LYS ALA SEQRES 13 G 295 PHE ASP ARG PRO ILE CYS GLU ALA LEU LEU ASP GLN ARG SEQRES 14 G 295 PHE PHE ASN GLY ILE GLY ASN TYR LEU ARG ALA GLU ILE SEQRES 15 G 295 LEU TYR ARG LEU LYS ILE PRO PRO PHE GLU LYS ALA ARG SEQRES 16 G 295 SER VAL LEU GLU ALA LEU GLN GLN HIS ARG PRO SER PRO SEQRES 17 G 295 GLU LEU THR LEU SER GLN LYS ILE ARG THR LYS LEU GLN SEQRES 18 G 295 ASN PRO ASP LEU LEU GLU LEU CYS HIS SER VAL PRO LYS SEQRES 19 G 295 GLU VAL VAL GLN LEU GLY GLY LYS GLY TYR GLY SER GLU SEQRES 20 G 295 SER GLY GLU GLU ASP PHE ALA ALA PHE ARG ALA TRP LEU SEQRES 21 G 295 ARG CYS TYR GLY MET PRO GLY MET SER SER LEU GLN ASP SEQRES 22 G 295 ARG HIS GLY ARG THR ILE TRP PHE GLN GLY ASP PRO GLY SEQRES 23 G 295 PRO LEU ALA PRO LYS GLY ARG LYS SER SEQRES 1 H 13 DC DG DT DC DC DA QBT DG DT DC DT DA DC SEQRES 1 I 13 DT DA DG DA DC DC DT DG DG DA DC DG DG HET QBT B 7 20 HET QBT E 7 20 HET QBT H 7 20 HET GOL A 301 6 HETNAM QBT [(2R,3S,5R)-3-HYDROXY-5-[(5S)-5-METHYL-2,4-DIOXO-1,3- HETNAM 2 QBT DIAZINAN-1-YL]OXOLAN-2-YL]METHYL DIHYDROGEN PHOSPHATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 QBT 3(C10 H17 N2 O8 P) FORMUL 10 GOL C3 H8 O3 FORMUL 11 HOH *153(H2 O) HELIX 1 AA1 GLN A 3 ARG A 19 1 17 HELIX 2 AA2 GLU A 140 ARG A 150 1 11 HELIX 3 AA3 ASP A 154 ARG A 159 5 6 HELIX 4 AA4 PRO A 160 LEU A 165 1 6 HELIX 5 AA5 GLY A 175 LYS A 187 1 13 HELIX 6 AA6 LYS A 193 ALA A 200 1 8 HELIX 7 AA7 ASP A 224 GLY A 240 1 17 HELIX 8 AA8 GLU A 250 LEU A 260 1 11 HELIX 9 AA9 GLN D 3 ARG D 19 1 17 HELIX 10 AB1 GLU D 140 ARG D 150 1 11 HELIX 11 AB2 ASP D 154 ARG D 159 5 6 HELIX 12 AB3 PRO D 160 LEU D 165 1 6 HELIX 13 AB4 GLY D 175 LEU D 186 1 12 HELIX 14 AB5 LYS D 193 ALA D 200 1 8 HELIX 15 AB6 ASP D 224 GLY D 240 1 17 HELIX 16 AB7 GLU D 250 LEU D 260 1 11 HELIX 17 AB8 GLN G 3 CYS G 18 1 16 HELIX 18 AB9 GLU G 140 ARG G 150 1 11 HELIX 19 AC1 ASP G 154 ARG G 159 5 6 HELIX 20 AC2 PRO G 160 LEU G 165 1 6 HELIX 21 AC3 GLY G 175 LEU G 186 1 12 HELIX 22 AC4 LYS G 193 ALA G 200 1 8 HELIX 23 AC5 ASP G 224 LEU G 239 1 16 HELIX 24 AC6 GLU G 251 LEU G 260 1 10 SHEET 1 AA1 8 GLY A 83 PRO A 89 0 SHEET 2 AA1 8 LEU A 110 ASP A 116 -1 O CYS A 113 N GLN A 86 SHEET 3 AA1 8 ALA A 97 TYR A 102 -1 N LEU A 99 O PHE A 114 SHEET 4 AA1 8 PHE A 23 LYS A 29 -1 N GLU A 28 O ARG A 100 SHEET 5 AA1 8 VAL A 38 ARG A 52 -1 O TYR A 45 N PHE A 23 SHEET 6 AA1 8 GLU A 55 PRO A 62 -1 O ARG A 57 N SER A 50 SHEET 7 AA1 8 LEU A 73 ARG A 78 -1 O LEU A 73 N LEU A 60 SHEET 8 AA1 8 ARG A 122 ASP A 124 -1 O ARG A 122 N ARG A 78 SHEET 1 AA2 2 SER A 269 GLN A 272 0 SHEET 2 AA2 2 THR A 278 PHE A 281 -1 O ILE A 279 N LEU A 271 SHEET 1 AA3 8 GLY D 83 PRO D 89 0 SHEET 2 AA3 8 LEU D 110 ASP D 116 -1 O CYS D 113 N GLN D 86 SHEET 3 AA3 8 ALA D 97 THR D 103 -1 N LEU D 99 O PHE D 114 SHEET 4 AA3 8 PHE D 23 LYS D 29 -1 N GLU D 28 O ARG D 100 SHEET 5 AA3 8 GLU D 41 ARG D 52 -1 O TYR D 45 N PHE D 23 SHEET 6 AA3 8 GLU D 55 PRO D 62 -1 O ARG D 57 N SER D 50 SHEET 7 AA3 8 LEU D 73 ARG D 78 -1 O LEU D 73 N LEU D 60 SHEET 8 AA3 8 ARG D 122 LEU D 125 -1 O ARG D 122 N ARG D 78 SHEET 1 AA4 2 SER D 269 GLN D 272 0 SHEET 2 AA4 2 THR D 278 PHE D 281 -1 O ILE D 279 N LEU D 271 SHEET 1 AA5 4 VAL G 27 LYS G 29 0 SHEET 2 AA5 4 ALA G 97 PHE G 101 -1 O ARG G 100 N GLU G 28 SHEET 3 AA5 4 LEU G 112 ASP G 116 -1 O PHE G 114 N LEU G 99 SHEET 4 AA5 4 GLY G 83 LEU G 87 -1 N GLN G 86 O CYS G 113 SHEET 1 AA6 4 ARG G 46 ARG G 52 0 SHEET 2 AA6 4 GLU G 55 SER G 61 -1 O ARG G 57 N SER G 50 SHEET 3 AA6 4 PHE G 77 ARG G 78 -1 O PHE G 77 N LEU G 56 SHEET 4 AA6 4 ARG G 122 TRP G 123 -1 O ARG G 122 N ARG G 78 SHEET 1 AA7 2 SER G 269 GLN G 272 0 SHEET 2 AA7 2 THR G 278 PHE G 281 -1 O ILE G 279 N LEU G 271 LINK O3' DA B 6 P QBT B 7 1555 1555 1.59 LINK O3' QBT B 7 P DG B 8 1555 1555 1.60 LINK O3' DA E 6 P QBT E 7 1555 1555 1.56 LINK O3' QBT E 7 P DG E 8 1555 1555 1.56 LINK O3' DA H 6 P QBT H 7 1555 1555 1.60 LINK O3' QBT H 7 P DG H 8 1555 1555 1.57 CISPEP 1 GLN A 67 PRO A 68 0 -11.80 CISPEP 2 PRO A 105 PRO A 106 0 22.14 CISPEP 3 GLN D 67 PRO D 68 0 6.21 CRYST1 73.593 109.014 168.053 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013588 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009173 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005951 0.00000