HEADER DNA BINDING PROTEIN/DNA 07-FEB-20 6LWK TITLE CRYSTAL STRUCTURE OF HUMAN NEIL1(P2G, E3Q, R242) BOUND TO DUPLEX DNA TITLE 2 CONTAINING DIHYDROURACIL (DHU) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDONUCLEASE 8-LIKE 1; COMPND 3 CHAIN: A, D, G; COMPND 4 SYNONYM: DNA GLYCOSYLASE/AP LYASE NEIL1,DNA-(APURINIC OR APYRIMIDINIC COMPND 5 SITE) LYASE NEIL1,ENDONUCLEASE VIII-LIKE 1,FPG1,NEI HOMOLOG 1,NEH1, COMPND 6 NEI-LIKE PROTEIN 1; COMPND 7 EC: 3.2.2.-,4.2.99.18; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: DNA (5'-D(*CP*GP*TP*CP*CP*AP*(UDH)P*GP*TP*CP*TP*AP*C)-3'); COMPND 12 CHAIN: B, E, H; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: CGTCCA(UDH)GTCTAC; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: DNA (5'-D(*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*G)-3'); COMPND 17 CHAIN: C, F, I; COMPND 18 ENGINEERED: YES; COMPND 19 OTHER_DETAILS: COMPLEMENTARY STRAND SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NEIL1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 11 ORGANISM_TAXID: 562; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 15 ORGANISM_TAXID: 562 KEYWDS BASE LESION, OXIDATIVE DNA DAMAGE, DNA REPAIR, DNA BINDING PROTEIN- KEYWDS 2 DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.H.LIU,J.ZHANG,C.X.ZHU,X.X.ZHANG,Y.Q.GAO,C.Q.YI REVDAT 3 29-NOV-23 6LWK 1 REMARK REVDAT 2 14-JUL-21 6LWK 1 JRNL REVDAT 1 09-JUN-21 6LWK 0 JRNL AUTH M.LIU,J.ZHANG,C.ZHU,X.ZHANG,W.XIAO,Y.YAN,L.LIU,H.ZENG, JRNL AUTH 2 Y.Q.GAO,C.YI JRNL TITL DNA REPAIR GLYCOSYLASE HNEIL1 TRIAGES DAMAGED BASES VIA JRNL TITL 2 COMPETING INTERACTION MODES. JRNL REF NAT COMMUN V. 12 4108 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 34226550 JRNL DOI 10.1038/S41467-021-24431-Y REMARK 2 REMARK 2 RESOLUTION. 2.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 30016 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1612 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.88 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2060 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.2830 REMARK 3 BIN FREE R VALUE SET COUNT : 109 REMARK 3 BIN FREE R VALUE : 0.2930 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5948 REMARK 3 NUCLEIC ACID ATOMS : 1572 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 146 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 84.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.87000 REMARK 3 B22 (A**2) : -0.32000 REMARK 3 B33 (A**2) : 3.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.356 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.289 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 31.086 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.896 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7859 ; 0.008 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 6528 ; 0.001 ; 0.018 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10921 ; 1.554 ; 1.545 REMARK 3 BOND ANGLES OTHERS (DEGREES): 15042 ; 1.350 ; 1.778 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 757 ;11.134 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 374 ;33.109 ;20.027 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 949 ;18.046 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 71 ;20.865 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 932 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8006 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1963 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 290 REMARK 3 ORIGIN FOR THE GROUP (A): -8.590 -8.641 35.479 REMARK 3 T TENSOR REMARK 3 T11: 0.0280 T22: 0.0262 REMARK 3 T33: 0.2378 T12: 0.0025 REMARK 3 T13: 0.0592 T23: 0.0391 REMARK 3 L TENSOR REMARK 3 L11: 2.8149 L22: 6.3649 REMARK 3 L33: 1.8744 L12: 2.3309 REMARK 3 L13: 0.3121 L23: 1.8778 REMARK 3 S TENSOR REMARK 3 S11: -0.1503 S12: 0.1621 S13: 0.0089 REMARK 3 S21: -0.2098 S22: 0.2445 S23: -0.4835 REMARK 3 S31: 0.0500 S32: 0.0722 S33: -0.0941 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 13 REMARK 3 ORIGIN FOR THE GROUP (A): -1.240 -15.315 19.452 REMARK 3 T TENSOR REMARK 3 T11: 0.5801 T22: 0.5894 REMARK 3 T33: 0.5584 T12: 0.0841 REMARK 3 T13: 0.1184 T23: -0.1284 REMARK 3 L TENSOR REMARK 3 L11: 9.9288 L22: 1.9087 REMARK 3 L33: 2.0989 L12: -2.3416 REMARK 3 L13: -3.1197 L23: 0.2245 REMARK 3 S TENSOR REMARK 3 S11: 0.5556 S12: 1.4320 S13: -0.1675 REMARK 3 S21: -0.9887 S22: -0.4209 S23: -0.1537 REMARK 3 S31: 0.0743 S32: 0.1689 S33: -0.1347 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 13 REMARK 3 ORIGIN FOR THE GROUP (A): 3.762 -17.967 20.051 REMARK 3 T TENSOR REMARK 3 T11: 0.3790 T22: 0.4864 REMARK 3 T33: 0.5661 T12: -0.0071 REMARK 3 T13: 0.3320 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 4.8428 L22: 9.6488 REMARK 3 L33: 4.9018 L12: -1.3041 REMARK 3 L13: -0.7687 L23: 2.6865 REMARK 3 S TENSOR REMARK 3 S11: 0.0942 S12: 0.0782 S13: -0.2102 REMARK 3 S21: -0.7089 S22: 0.1950 S23: -0.3500 REMARK 3 S31: 0.3691 S32: -0.1971 S33: -0.2892 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 2 D 290 REMARK 3 ORIGIN FOR THE GROUP (A): -29.843 8.082 51.147 REMARK 3 T TENSOR REMARK 3 T11: 0.1001 T22: 0.0429 REMARK 3 T33: 0.2104 T12: 0.0333 REMARK 3 T13: 0.0532 T23: -0.0090 REMARK 3 L TENSOR REMARK 3 L11: 5.3687 L22: 4.5629 REMARK 3 L33: 4.4047 L12: -2.3458 REMARK 3 L13: -0.0207 L23: -0.6869 REMARK 3 S TENSOR REMARK 3 S11: -0.2131 S12: -0.1613 S13: -0.5602 REMARK 3 S21: 0.2762 S22: 0.1382 S23: 0.2777 REMARK 3 S31: 0.2684 S32: -0.1790 S33: 0.0749 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 13 REMARK 3 ORIGIN FOR THE GROUP (A): -35.916 17.672 65.741 REMARK 3 T TENSOR REMARK 3 T11: 0.4240 T22: 0.4434 REMARK 3 T33: 0.2399 T12: 0.1310 REMARK 3 T13: -0.0253 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 8.2906 L22: 5.9194 REMARK 3 L33: 4.1735 L12: 0.0877 REMARK 3 L13: -2.6845 L23: 1.0043 REMARK 3 S TENSOR REMARK 3 S11: -0.1732 S12: -0.9525 S13: 0.1636 REMARK 3 S21: 0.7518 S22: 0.0711 S23: 0.2193 REMARK 3 S31: -0.4756 S32: -0.2861 S33: 0.1021 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 1 F 13 REMARK 3 ORIGIN FOR THE GROUP (A): -40.567 15.584 68.023 REMARK 3 T TENSOR REMARK 3 T11: 0.3921 T22: 0.4208 REMARK 3 T33: 0.4104 T12: 0.2327 REMARK 3 T13: 0.1934 T23: 0.1527 REMARK 3 L TENSOR REMARK 3 L11: 7.8639 L22: 4.5512 REMARK 3 L33: 10.2511 L12: 1.4886 REMARK 3 L13: 1.2978 L23: -0.0238 REMARK 3 S TENSOR REMARK 3 S11: -0.1700 S12: -1.0292 S13: -0.5434 REMARK 3 S21: 1.0373 S22: 0.2100 S23: -0.1518 REMARK 3 S31: 0.0757 S32: -0.0954 S33: -0.0400 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 2 G 289 REMARK 3 ORIGIN FOR THE GROUP (A): -42.258 10.054 3.480 REMARK 3 T TENSOR REMARK 3 T11: 0.9727 T22: 0.6306 REMARK 3 T33: 0.4519 T12: 0.1370 REMARK 3 T13: -0.0347 T23: -0.1404 REMARK 3 L TENSOR REMARK 3 L11: 5.9908 L22: 1.8811 REMARK 3 L33: 6.3020 L12: -0.4785 REMARK 3 L13: -3.4925 L23: 0.7173 REMARK 3 S TENSOR REMARK 3 S11: 0.2044 S12: -0.0510 S13: 0.1497 REMARK 3 S21: -0.1857 S22: -0.1843 S23: -0.0551 REMARK 3 S31: -0.2931 S32: -0.4305 S33: -0.0201 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 1 H 13 REMARK 3 ORIGIN FOR THE GROUP (A): -37.121 -5.873 -0.972 REMARK 3 T TENSOR REMARK 3 T11: 0.9491 T22: 0.8542 REMARK 3 T33: 0.8193 T12: 0.0262 REMARK 3 T13: -0.2227 T23: -0.0449 REMARK 3 L TENSOR REMARK 3 L11: 7.3483 L22: 0.1225 REMARK 3 L33: 5.4230 L12: 0.3756 REMARK 3 L13: 0.1729 L23: -0.5666 REMARK 3 S TENSOR REMARK 3 S11: 0.1454 S12: 0.0443 S13: -1.3601 REMARK 3 S21: -0.1571 S22: 0.0889 S23: 0.0438 REMARK 3 S31: 0.0123 S32: -0.0414 S33: -0.2343 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : I 1 I 13 REMARK 3 ORIGIN FOR THE GROUP (A): -32.589 -7.204 1.449 REMARK 3 T TENSOR REMARK 3 T11: 0.8466 T22: 0.7863 REMARK 3 T33: 0.6318 T12: 0.1503 REMARK 3 T13: -0.0077 T23: -0.1329 REMARK 3 L TENSOR REMARK 3 L11: 8.5015 L22: 4.1376 REMARK 3 L33: 3.2249 L12: -0.0070 REMARK 3 L13: 0.4739 L23: -2.9347 REMARK 3 S TENSOR REMARK 3 S11: -0.1090 S12: -0.3626 S13: -0.2416 REMARK 3 S21: 0.4113 S22: -0.0886 S23: 0.1299 REMARK 3 S31: 0.3526 S32: 0.0582 S33: 0.1976 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6LWK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1300015578. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 130 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31683 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.870 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.68800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5ITY REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN I/F_PLUS/MINUS REMARK 200 COLUMNS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CACODYLIC ACID (PH 6.5), 0.1 M REMARK 280 NACL, 0.05 M MGCL2 AND 18% (W/V) PEG 8000, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.93550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.66150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.54800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 84.66150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.93550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.54800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 203 REMARK 465 HIS A 204 REMARK 465 ARG A 205 REMARK 465 PRO A 206 REMARK 465 SER A 207 REMARK 465 PRO A 208 REMARK 465 GLU A 209 REMARK 465 LEU A 210 REMARK 465 THR A 211 REMARK 465 LEU A 212 REMARK 465 SER A 213 REMARK 465 GLN A 214 REMARK 465 LYS A 215 REMARK 465 ILE A 216 REMARK 465 ARG A 217 REMARK 465 THR A 218 REMARK 465 LYS A 219 REMARK 465 LEU A 220 REMARK 465 GLN A 221 REMARK 465 LYS A 291 REMARK 465 GLY A 292 REMARK 465 ARG A 293 REMARK 465 LYS A 294 REMARK 465 SER A 295 REMARK 465 MET D 1 REMARK 465 GLN D 203 REMARK 465 HIS D 204 REMARK 465 ARG D 205 REMARK 465 PRO D 206 REMARK 465 SER D 207 REMARK 465 PRO D 208 REMARK 465 GLU D 209 REMARK 465 LEU D 210 REMARK 465 THR D 211 REMARK 465 LEU D 212 REMARK 465 SER D 213 REMARK 465 GLN D 214 REMARK 465 LYS D 215 REMARK 465 ILE D 216 REMARK 465 ARG D 217 REMARK 465 THR D 218 REMARK 465 LYS D 219 REMARK 465 LEU D 220 REMARK 465 GLN D 221 REMARK 465 GLY D 245 REMARK 465 LYS D 291 REMARK 465 GLY D 292 REMARK 465 ARG D 293 REMARK 465 LYS D 294 REMARK 465 SER D 295 REMARK 465 MET G 1 REMARK 465 CYS G 18 REMARK 465 ARG G 19 REMARK 465 ALA G 20 REMARK 465 LEU G 21 REMARK 465 VAL G 22 REMARK 465 PHE G 23 REMARK 465 GLU G 41 REMARK 465 SER G 42 REMARK 465 SER G 43 REMARK 465 ALA G 44 REMARK 465 TYR G 45 REMARK 465 ARG G 46 REMARK 465 LEU G 63 REMARK 465 PRO G 64 REMARK 465 GLY G 65 REMARK 465 ALA G 66 REMARK 465 GLN G 67 REMARK 465 GLU G 91 REMARK 465 GLU G 92 REMARK 465 GLY G 107 REMARK 465 PRO G 108 REMARK 465 ARG G 109 REMARK 465 LEU G 110 REMARK 465 VAL G 148 REMARK 465 LEU G 149 REMARK 465 ARG G 150 REMARK 465 ASN G 151 REMARK 465 LEU G 152 REMARK 465 GLN G 203 REMARK 465 HIS G 204 REMARK 465 ARG G 205 REMARK 465 PRO G 206 REMARK 465 SER G 207 REMARK 465 PRO G 208 REMARK 465 GLU G 209 REMARK 465 LEU G 210 REMARK 465 THR G 211 REMARK 465 LEU G 212 REMARK 465 SER G 213 REMARK 465 GLN G 214 REMARK 465 LYS G 215 REMARK 465 ILE G 216 REMARK 465 ARG G 217 REMARK 465 THR G 218 REMARK 465 LYS G 219 REMARK 465 LEU G 220 REMARK 465 GLN G 221 REMARK 465 GLY G 240 REMARK 465 GLY G 241 REMARK 465 ARG G 242 REMARK 465 GLY G 243 REMARK 465 TYR G 244 REMARK 465 GLY G 245 REMARK 465 SER G 246 REMARK 465 GLU G 247 REMARK 465 SER G 248 REMARK 465 PRO G 290 REMARK 465 LYS G 291 REMARK 465 GLY G 292 REMARK 465 ARG G 293 REMARK 465 LYS G 294 REMARK 465 SER G 295 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN G 12 CB CG CD OE1 NE2 REMARK 470 VAL G 14 CG1 CG2 REMARK 470 CYS G 26 CB SG REMARK 470 VAL G 27 CB CG1 CG2 REMARK 470 VAL G 38 CG1 CG2 REMARK 470 PHE G 40 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE G 47 CG1 CG2 CD1 REMARK 470 SER G 48 CB OG REMARK 470 GLU G 55 CB CG CD OE1 OE2 REMARK 470 LEU G 56 CG CD1 CD2 REMARK 470 LEU G 58 CB CG CD1 CD2 REMARK 470 ILE G 59 CG1 CG2 CD1 REMARK 470 LEU G 60 CB CG CD1 CD2 REMARK 470 GLN G 69 CG CD OE1 NE2 REMARK 470 GLU G 71 CB CG CD OE1 OE2 REMARK 470 LEU G 73 CB CG CD1 CD2 REMARK 470 ALA G 74 CB REMARK 470 LEU G 75 CB CG CD1 CD2 REMARK 470 VAL G 76 CG1 CG2 REMARK 470 PHE G 77 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU G 87 CB CG CD1 CD2 REMARK 470 VAL G 88 CG1 CG2 REMARK 470 PRO G 94 CB CG CD REMARK 470 ARG G 100 CB CG CD NE CZ NH1 NH2 REMARK 470 PHE G 101 CG CD1 CD2 CE1 CE2 CZ REMARK 470 CYS G 113 CB SG REMARK 470 LEU G 125 CB CG CD1 CD2 REMARK 470 TRP G 129 CB CG CD1 CD2 NE1 CE2 CE3 REMARK 470 TRP G 129 CZ2 CZ3 CH2 REMARK 470 ARG G 133 CG CD NE CZ NH1 NH2 REMARK 470 LYS G 155 CB CG CD CE NZ REMARK 470 ALA G 156 CB REMARK 470 PHE G 157 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU G 165 CG CD1 CD2 REMARK 470 PHE G 170 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE G 174 CG1 CG2 CD1 REMARK 470 TYR G 184 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE G 188 CG1 CG2 CD1 REMARK 470 PRO G 190 CB CG CD REMARK 470 ALA G 194 CB REMARK 470 VAL G 197 CB CG1 CG2 REMARK 470 LEU G 198 CG CD1 CD2 REMARK 470 LEU G 225 CG CD1 CD2 REMARK 470 ALA G 255 CB REMARK 470 LEU G 271 CB CG CD1 CD2 REMARK 470 THR G 278 OG1 CG2 REMARK 470 PRO G 285 CB CG CD REMARK 470 PRO G 287 CB CG CD REMARK 470 LEU G 288 CB CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OP1 DT F 7 O HOH F 101 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA F 2 C2' - C3' - O3' ANGL. DEV. = -19.9 DEGREES REMARK 500 DA I 2 C4' - C3' - O3' ANGL. DEV. = 14.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 246 61.11 -150.48 REMARK 500 CYS A 262 -55.86 -130.13 REMARK 500 ALA D 44 118.16 -162.58 REMARK 500 HIS D 96 19.69 81.66 REMARK 500 PRO D 105 -177.98 -40.95 REMARK 500 PRO D 106 -174.96 -52.07 REMARK 500 LEU D 239 3.05 -66.01 REMARK 500 CYS D 262 -57.66 -129.80 REMARK 500 PRO G 105 25.64 -71.50 REMARK 500 ALA G 200 31.30 -68.86 REMARK 500 CYS G 262 -55.54 -130.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 105 PRO A 106 44.70 REMARK 500 ASN A 222 PRO A 223 -144.44 REMARK 500 PRO D 105 PRO D 106 -91.95 REMARK 500 PRO G 105 PRO G 106 145.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 472 DISTANCE = 6.30 ANGSTROMS DBREF 6LWK A 1 295 UNP Q96FI4 NEIL1_HUMAN 1 295 DBREF 6LWK B 1 13 PDB 6LWK 6LWK 1 13 DBREF 6LWK C 1 13 PDB 6LWK 6LWK 1 13 DBREF 6LWK D 1 295 UNP Q96FI4 NEIL1_HUMAN 1 295 DBREF 6LWK E 1 13 PDB 6LWK 6LWK 1 13 DBREF 6LWK F 1 13 PDB 6LWK 6LWK 1 13 DBREF 6LWK G 1 295 UNP Q96FI4 NEIL1_HUMAN 1 295 DBREF 6LWK H 1 13 PDB 6LWK 6LWK 1 13 DBREF 6LWK I 1 13 PDB 6LWK 6LWK 1 13 SEQADV 6LWK GLY A 2 UNP Q96FI4 PRO 2 ENGINEERED MUTATION SEQADV 6LWK GLN A 3 UNP Q96FI4 GLU 3 ENGINEERED MUTATION SEQADV 6LWK ARG A 242 UNP Q96FI4 LYS 242 VARIANT SEQADV 6LWK GLY D 2 UNP Q96FI4 PRO 2 ENGINEERED MUTATION SEQADV 6LWK GLN D 3 UNP Q96FI4 GLU 3 ENGINEERED MUTATION SEQADV 6LWK ARG D 242 UNP Q96FI4 LYS 242 VARIANT SEQADV 6LWK GLY G 2 UNP Q96FI4 PRO 2 ENGINEERED MUTATION SEQADV 6LWK GLN G 3 UNP Q96FI4 GLU 3 ENGINEERED MUTATION SEQADV 6LWK ARG G 242 UNP Q96FI4 LYS 242 VARIANT SEQRES 1 A 295 MET GLY GLN GLY PRO GLU LEU HIS LEU ALA SER GLN PHE SEQRES 2 A 295 VAL ASN GLU ALA CYS ARG ALA LEU VAL PHE GLY GLY CYS SEQRES 3 A 295 VAL GLU LYS SER SER VAL SER ARG ASN PRO GLU VAL PRO SEQRES 4 A 295 PHE GLU SER SER ALA TYR ARG ILE SER ALA SER ALA ARG SEQRES 5 A 295 GLY LYS GLU LEU ARG LEU ILE LEU SER PRO LEU PRO GLY SEQRES 6 A 295 ALA GLN PRO GLN GLN GLU PRO LEU ALA LEU VAL PHE ARG SEQRES 7 A 295 PHE GLY MET SER GLY SER PHE GLN LEU VAL PRO ARG GLU SEQRES 8 A 295 GLU LEU PRO ARG HIS ALA HIS LEU ARG PHE TYR THR ALA SEQRES 9 A 295 PRO PRO GLY PRO ARG LEU ALA LEU CYS PHE VAL ASP ILE SEQRES 10 A 295 ARG ARG PHE GLY ARG TRP ASP LEU GLY GLY LYS TRP GLN SEQRES 11 A 295 PRO GLY ARG GLY PRO CYS VAL LEU GLN GLU TYR GLN GLN SEQRES 12 A 295 PHE ARG GLU ASN VAL LEU ARG ASN LEU ALA ASP LYS ALA SEQRES 13 A 295 PHE ASP ARG PRO ILE CYS GLU ALA LEU LEU ASP GLN ARG SEQRES 14 A 295 PHE PHE ASN GLY ILE GLY ASN TYR LEU ARG ALA GLU ILE SEQRES 15 A 295 LEU TYR ARG LEU LYS ILE PRO PRO PHE GLU LYS ALA ARG SEQRES 16 A 295 SER VAL LEU GLU ALA LEU GLN GLN HIS ARG PRO SER PRO SEQRES 17 A 295 GLU LEU THR LEU SER GLN LYS ILE ARG THR LYS LEU GLN SEQRES 18 A 295 ASN PRO ASP LEU LEU GLU LEU CYS HIS SER VAL PRO LYS SEQRES 19 A 295 GLU VAL VAL GLN LEU GLY GLY ARG GLY TYR GLY SER GLU SEQRES 20 A 295 SER GLY GLU GLU ASP PHE ALA ALA PHE ARG ALA TRP LEU SEQRES 21 A 295 ARG CYS TYR GLY MET PRO GLY MET SER SER LEU GLN ASP SEQRES 22 A 295 ARG HIS GLY ARG THR ILE TRP PHE GLN GLY ASP PRO GLY SEQRES 23 A 295 PRO LEU ALA PRO LYS GLY ARG LYS SER SEQRES 1 B 13 DC DG DT DC DC DA UMC DG DT DC DT DA DC SEQRES 1 C 13 DT DA DG DA DC DC DT DG DG DA DC DG DG SEQRES 1 D 295 MET GLY GLN GLY PRO GLU LEU HIS LEU ALA SER GLN PHE SEQRES 2 D 295 VAL ASN GLU ALA CYS ARG ALA LEU VAL PHE GLY GLY CYS SEQRES 3 D 295 VAL GLU LYS SER SER VAL SER ARG ASN PRO GLU VAL PRO SEQRES 4 D 295 PHE GLU SER SER ALA TYR ARG ILE SER ALA SER ALA ARG SEQRES 5 D 295 GLY LYS GLU LEU ARG LEU ILE LEU SER PRO LEU PRO GLY SEQRES 6 D 295 ALA GLN PRO GLN GLN GLU PRO LEU ALA LEU VAL PHE ARG SEQRES 7 D 295 PHE GLY MET SER GLY SER PHE GLN LEU VAL PRO ARG GLU SEQRES 8 D 295 GLU LEU PRO ARG HIS ALA HIS LEU ARG PHE TYR THR ALA SEQRES 9 D 295 PRO PRO GLY PRO ARG LEU ALA LEU CYS PHE VAL ASP ILE SEQRES 10 D 295 ARG ARG PHE GLY ARG TRP ASP LEU GLY GLY LYS TRP GLN SEQRES 11 D 295 PRO GLY ARG GLY PRO CYS VAL LEU GLN GLU TYR GLN GLN SEQRES 12 D 295 PHE ARG GLU ASN VAL LEU ARG ASN LEU ALA ASP LYS ALA SEQRES 13 D 295 PHE ASP ARG PRO ILE CYS GLU ALA LEU LEU ASP GLN ARG SEQRES 14 D 295 PHE PHE ASN GLY ILE GLY ASN TYR LEU ARG ALA GLU ILE SEQRES 15 D 295 LEU TYR ARG LEU LYS ILE PRO PRO PHE GLU LYS ALA ARG SEQRES 16 D 295 SER VAL LEU GLU ALA LEU GLN GLN HIS ARG PRO SER PRO SEQRES 17 D 295 GLU LEU THR LEU SER GLN LYS ILE ARG THR LYS LEU GLN SEQRES 18 D 295 ASN PRO ASP LEU LEU GLU LEU CYS HIS SER VAL PRO LYS SEQRES 19 D 295 GLU VAL VAL GLN LEU GLY GLY ARG GLY TYR GLY SER GLU SEQRES 20 D 295 SER GLY GLU GLU ASP PHE ALA ALA PHE ARG ALA TRP LEU SEQRES 21 D 295 ARG CYS TYR GLY MET PRO GLY MET SER SER LEU GLN ASP SEQRES 22 D 295 ARG HIS GLY ARG THR ILE TRP PHE GLN GLY ASP PRO GLY SEQRES 23 D 295 PRO LEU ALA PRO LYS GLY ARG LYS SER SEQRES 1 E 13 DC DG DT DC DC DA UMC DG DT DC DT DA DC SEQRES 1 F 13 DT DA DG DA DC DC DT DG DG DA DC DG DG SEQRES 1 G 295 MET GLY GLN GLY PRO GLU LEU HIS LEU ALA SER GLN PHE SEQRES 2 G 295 VAL ASN GLU ALA CYS ARG ALA LEU VAL PHE GLY GLY CYS SEQRES 3 G 295 VAL GLU LYS SER SER VAL SER ARG ASN PRO GLU VAL PRO SEQRES 4 G 295 PHE GLU SER SER ALA TYR ARG ILE SER ALA SER ALA ARG SEQRES 5 G 295 GLY LYS GLU LEU ARG LEU ILE LEU SER PRO LEU PRO GLY SEQRES 6 G 295 ALA GLN PRO GLN GLN GLU PRO LEU ALA LEU VAL PHE ARG SEQRES 7 G 295 PHE GLY MET SER GLY SER PHE GLN LEU VAL PRO ARG GLU SEQRES 8 G 295 GLU LEU PRO ARG HIS ALA HIS LEU ARG PHE TYR THR ALA SEQRES 9 G 295 PRO PRO GLY PRO ARG LEU ALA LEU CYS PHE VAL ASP ILE SEQRES 10 G 295 ARG ARG PHE GLY ARG TRP ASP LEU GLY GLY LYS TRP GLN SEQRES 11 G 295 PRO GLY ARG GLY PRO CYS VAL LEU GLN GLU TYR GLN GLN SEQRES 12 G 295 PHE ARG GLU ASN VAL LEU ARG ASN LEU ALA ASP LYS ALA SEQRES 13 G 295 PHE ASP ARG PRO ILE CYS GLU ALA LEU LEU ASP GLN ARG SEQRES 14 G 295 PHE PHE ASN GLY ILE GLY ASN TYR LEU ARG ALA GLU ILE SEQRES 15 G 295 LEU TYR ARG LEU LYS ILE PRO PRO PHE GLU LYS ALA ARG SEQRES 16 G 295 SER VAL LEU GLU ALA LEU GLN GLN HIS ARG PRO SER PRO SEQRES 17 G 295 GLU LEU THR LEU SER GLN LYS ILE ARG THR LYS LEU GLN SEQRES 18 G 295 ASN PRO ASP LEU LEU GLU LEU CYS HIS SER VAL PRO LYS SEQRES 19 G 295 GLU VAL VAL GLN LEU GLY GLY ARG GLY TYR GLY SER GLU SEQRES 20 G 295 SER GLY GLU GLU ASP PHE ALA ALA PHE ARG ALA TRP LEU SEQRES 21 G 295 ARG CYS TYR GLY MET PRO GLY MET SER SER LEU GLN ASP SEQRES 22 G 295 ARG HIS GLY ARG THR ILE TRP PHE GLN GLY ASP PRO GLY SEQRES 23 G 295 PRO LEU ALA PRO LYS GLY ARG LYS SER SEQRES 1 H 13 DC DG DT DC DC DA UMC DG DT DC DT DA DC SEQRES 1 I 13 DT DA DG DA DC DC DT DG DG DA DC DG DG HET UMC B 7 19 HET UMC E 7 19 HET UMC H 7 19 HET GOL A 301 6 HETNAM UMC 2'-DEOXY-5'-URIDYLIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 UMC 3(C9 H15 N2 O8 P) FORMUL 10 GOL C3 H8 O3 FORMUL 11 HOH *146(H2 O) HELIX 1 AA1 GLN A 3 ARG A 19 1 17 HELIX 2 AA2 GLU A 140 ASN A 151 1 12 HELIX 3 AA3 ASP A 154 ARG A 159 5 6 HELIX 4 AA4 PRO A 160 LEU A 165 1 6 HELIX 5 AA5 GLY A 175 LYS A 187 1 13 HELIX 6 AA6 LYS A 193 ALA A 200 1 8 HELIX 7 AA7 ASP A 224 GLN A 238 1 15 HELIX 8 AA8 GLU A 250 LEU A 260 1 11 HELIX 9 AA9 GLN D 3 ARG D 19 1 17 HELIX 10 AB1 GLU D 140 ARG D 150 1 11 HELIX 11 AB2 ASP D 154 ARG D 159 5 6 HELIX 12 AB3 PRO D 160 LEU D 165 1 6 HELIX 13 AB4 GLY D 175 LYS D 187 1 13 HELIX 14 AB5 LYS D 193 GLN D 202 1 10 HELIX 15 AB6 ASP D 224 LEU D 239 1 16 HELIX 16 AB7 GLU D 250 LEU D 260 1 11 HELIX 17 AB8 GLN G 3 ALA G 17 1 15 HELIX 18 AB9 GLU G 140 ASN G 147 1 8 HELIX 19 AC1 ASP G 154 ARG G 159 5 6 HELIX 20 AC2 PRO G 160 LEU G 165 1 6 HELIX 21 AC3 GLY G 175 LYS G 187 1 13 HELIX 22 AC4 LYS G 193 ALA G 200 1 8 HELIX 23 AC5 ASP G 224 GLN G 238 1 15 HELIX 24 AC6 GLU G 250 LEU G 260 1 11 SHEET 1 AA1 8 SER A 84 PRO A 89 0 SHEET 2 AA1 8 LEU A 110 VAL A 115 -1 O CYS A 113 N GLN A 86 SHEET 3 AA1 8 ALA A 97 TYR A 102 -1 N LEU A 99 O PHE A 114 SHEET 4 AA1 8 PHE A 23 LYS A 29 -1 N GLY A 24 O TYR A 102 SHEET 5 AA1 8 VAL A 38 ARG A 52 -1 O TYR A 45 N PHE A 23 SHEET 6 AA1 8 GLU A 55 PRO A 62 -1 O SER A 61 N ARG A 46 SHEET 7 AA1 8 LEU A 73 ARG A 78 -1 O LEU A 73 N LEU A 60 SHEET 8 AA1 8 ARG A 122 ASP A 124 -1 O ARG A 122 N ARG A 78 SHEET 1 AA2 2 SER A 269 GLN A 272 0 SHEET 2 AA2 2 THR A 278 PHE A 281 -1 O ILE A 279 N LEU A 271 SHEET 1 AA3 8 GLY D 83 PRO D 89 0 SHEET 2 AA3 8 LEU D 110 ASP D 116 -1 O CYS D 113 N GLN D 86 SHEET 3 AA3 8 ALA D 97 TYR D 102 -1 N PHE D 101 O LEU D 112 SHEET 4 AA3 8 PHE D 23 LYS D 29 -1 N GLU D 28 O ARG D 100 SHEET 5 AA3 8 VAL D 38 ARG D 52 -1 O TYR D 45 N PHE D 23 SHEET 6 AA3 8 GLU D 55 PRO D 62 -1 O SER D 61 N ARG D 46 SHEET 7 AA3 8 LEU D 73 ARG D 78 -1 O LEU D 73 N LEU D 60 SHEET 8 AA3 8 ARG D 122 LEU D 125 -1 O ARG D 122 N ARG D 78 SHEET 1 AA4 2 SER D 269 GLN D 272 0 SHEET 2 AA4 2 THR D 278 PHE D 281 -1 O ILE D 279 N LEU D 271 SHEET 1 AA5 4 GLU G 28 LYS G 29 0 SHEET 2 AA5 4 ALA G 97 PHE G 101 -1 O ARG G 100 N GLU G 28 SHEET 3 AA5 4 LEU G 112 ASP G 116 -1 O LEU G 112 N PHE G 101 SHEET 4 AA5 4 GLY G 83 LEU G 87 -1 N GLN G 86 O CYS G 113 SHEET 1 AA6 4 SER G 48 ARG G 52 0 SHEET 2 AA6 4 GLU G 55 LEU G 60 -1 O ARG G 57 N SER G 50 SHEET 3 AA6 4 LEU G 73 ARG G 78 -1 O LEU G 73 N LEU G 60 SHEET 4 AA6 4 ARG G 122 LEU G 125 -1 O ARG G 122 N ARG G 78 SHEET 1 AA7 2 SER G 269 GLN G 272 0 SHEET 2 AA7 2 THR G 278 PHE G 281 -1 O ILE G 279 N LEU G 271 LINK O3' DA B 6 P UMC B 7 1555 1555 1.61 LINK O3' UMC B 7 P DG B 8 1555 1555 1.58 LINK O3' DA E 6 P UMC E 7 1555 1555 1.60 LINK O3' UMC E 7 P DG E 8 1555 1555 1.59 LINK O3' DA H 6 P UMC H 7 1555 1555 1.61 LINK O3' UMC H 7 P DG H 8 1555 1555 1.58 CISPEP 1 GLN A 67 PRO A 68 0 -10.15 CISPEP 2 GLN D 67 PRO D 68 0 -7.14 CRYST1 73.871 109.096 169.323 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013537 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009166 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005906 0.00000