HEADER PLANT VIRAL PROTEIN 11-FEB-20 6LXF TITLE AROMATIC INTERACTIONS DRIVE THE COUPLED FOLDING AND BINDING OF THE TITLE 2 INTRINSICALLY DISORDERED SESBANIA MOSAIC VIRUS VPG PROTEIN. COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYPROTEIN; COMPND 3 CHAIN: B; COMPND 4 SYNONYM: VIRAL PROTEIN GENOME LINKED (SEMV VPG); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SESBANIA MOSAIC VIRUS; SOURCE 3 ORGANISM_TAXID: 12558; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS IDPS (INTRINSICALLY DISORDER PROTEINS), VPG (VIRAL PROTEIN GENOME KEYWDS 2 LINKED), PLANT VIRAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 25 AUTHOR K.DIXIT,N.M.KARANTH,S.NAIR,K.KUMARI,K.S.CHAKRABARTI,H.S.SAVITHRI, AUTHOR 2 S.P.SARMA REVDAT 4 15-MAY-24 6LXF 1 REMARK REVDAT 3 14-JUN-23 6LXF 1 REMARK REVDAT 2 31-MAR-21 6LXF 1 JRNL REVDAT 1 20-JAN-21 6LXF 0 JRNL AUTH K.DIXIT,N.M.KARANTH,S.NAIR,K.KUMARI,K.S.CHAKRABARTI, JRNL AUTH 2 H.S.SAVITHRI,S.P.SARMA JRNL TITL AROMATIC INTERACTIONS DRIVE THE COUPLED FOLDING AND BINDING JRNL TITL 2 OF THE INTRINSICALLY DISORDERED SESBANIA MOSAIC VIRUS VPG JRNL TITL 3 PROTEIN. JRNL REF BIOCHEMISTRY V. 59 4663 2020 JRNL REFN ISSN 0006-2960 JRNL PMID 33269926 JRNL DOI 10.1021/ACS.BIOCHEM.0C00721 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 3.97 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6LXF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1300015564. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 0.065 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.3 MM [U-13C; U-15N; U-2H] REMARK 210 SELECTIVELY 1H (CH3) ILE, VAL, REMARK 210 LEU SESBANIA MOSAIC VIRUS- VIRAL REMARK 210 PROTEIN GENOME LINKED (SEMV VPG), REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D TROSY REMARK 210 ENHANCED HNCA; 3D TROSY ENHANCED REMARK 210 HN(CO)CA; 3D TROSY ENHANCED REMARK 210 HN(CA)CB; 3D TROSY ENHANCED REMARK 210 HN(COCA)CB; 3D HNCO; 3D 1H-15N REMARK 210 NOESY; 2D 1H-13C HSQC ALIPHATIC; REMARK 210 3D 1H-13C NOESY ALIPHATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : UNIFORM NMR SYSTEM REMARK 210 SPECTROMETER MANUFACTURER : AGILENT REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, CCPNMR ANALYSIS 2.1-2.4 REMARK 210 METHOD USED : NA REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 999 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 25 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER B 332 -72.86 -113.82 REMARK 500 1 ILE B 336 79.85 -166.97 REMARK 500 1 ARG B 356 -56.12 -132.47 REMARK 500 1 ARG B 364 30.78 -98.25 REMARK 500 1 PHE B 366 89.06 -160.37 REMARK 500 1 PRO B 370 79.14 -69.79 REMARK 500 2 SER B 332 -74.10 -78.72 REMARK 500 2 ARG B 356 -47.08 -131.85 REMARK 500 2 ALA B 367 89.53 -151.28 REMARK 500 2 PRO B 370 88.20 -69.74 REMARK 500 2 GLU B 371 -179.72 -172.18 REMARK 500 3 PRO B 329 79.70 -69.72 REMARK 500 3 SER B 332 -170.15 52.51 REMARK 500 3 SER B 345 -44.06 -130.14 REMARK 500 3 TYR B 346 -60.03 -130.05 REMARK 500 3 PHE B 348 -179.80 -170.14 REMARK 500 3 ARG B 356 -53.57 -131.59 REMARK 500 3 ALA B 367 89.20 -150.96 REMARK 500 3 PRO B 370 85.78 -69.76 REMARK 500 4 PRO B 329 83.51 -69.75 REMARK 500 4 ILE B 336 79.63 -152.94 REMARK 500 4 ARG B 356 -53.11 -131.52 REMARK 500 4 PHE B 366 89.12 -161.25 REMARK 500 4 TRP B 368 104.57 -161.17 REMARK 500 4 PRO B 370 77.49 -69.77 REMARK 500 5 PRO B 329 -171.39 -69.74 REMARK 500 5 GLU B 347 50.61 -117.98 REMARK 500 5 ARG B 364 30.79 -95.71 REMARK 500 5 PHE B 366 89.52 -159.55 REMARK 500 5 TRP B 368 106.48 -160.04 REMARK 500 5 PRO B 370 74.63 -69.81 REMARK 500 6 SER B 324 -172.64 57.94 REMARK 500 6 SER B 332 -47.42 -132.82 REMARK 500 6 ILE B 336 82.80 -157.43 REMARK 500 6 SER B 345 -179.05 -59.37 REMARK 500 6 ARG B 356 -54.22 -134.06 REMARK 500 6 PHE B 366 88.79 -160.79 REMARK 500 6 TRP B 368 99.76 -160.30 REMARK 500 6 PRO B 370 78.44 -69.75 REMARK 500 7 SER B 345 -179.15 -59.58 REMARK 500 7 GLU B 347 46.86 -89.74 REMARK 500 7 ARG B 356 -50.46 -131.14 REMARK 500 7 PHE B 366 89.40 -154.58 REMARK 500 7 PRO B 370 84.85 -69.72 REMARK 500 8 MET B 325 177.06 -56.37 REMARK 500 8 PRO B 329 79.28 -69.68 REMARK 500 8 SER B 345 -39.56 -130.04 REMARK 500 8 TYR B 346 -60.02 -126.32 REMARK 500 8 PHE B 348 -179.72 -170.20 REMARK 500 8 ARG B 356 -53.95 -127.85 REMARK 500 REMARK 500 THIS ENTRY HAS 171 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 50188 RELATED DB: BMRB REMARK 900 RELATED ID: 50193 RELATED DB: BMRB REMARK 900 RELATED ID: 6M78 RELATED DB: PDB DBREF 6LXF B 326 379 UNP Q9EB08 Q9EB08_9VIRU 326 379 SEQADV 6LXF GLY B 323 UNP Q9EB08 EXPRESSION TAG SEQADV 6LXF SER B 324 UNP Q9EB08 EXPRESSION TAG SEQADV 6LXF MET B 325 UNP Q9EB08 EXPRESSION TAG SEQRES 1 B 57 GLY SER MET THR LEU PRO PRO GLU LEU SER ILE ILE GLU SEQRES 2 B 57 ILE PRO PHE ASP ASP VAL GLU THR ARG SER TYR GLU PHE SEQRES 3 B 57 ILE GLU VAL GLU ILE LYS GLY ARG GLY LYS ALA LYS LEU SEQRES 4 B 57 GLY LYS ARG GLU PHE ALA TRP ILE PRO GLU SER GLY LYS SEQRES 5 B 57 TYR TRP ALA ASP GLU HELIX 1 AA1 PRO B 337 ARG B 344 1 8 SHEET 1 AA1 3 ILE B 349 ILE B 353 0 SHEET 2 AA1 3 GLY B 357 GLY B 362 -1 O GLY B 357 N ILE B 353 SHEET 3 AA1 3 GLU B 365 ILE B 369 -1 O ALA B 367 N LYS B 360 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1