data_6LYC # _entry.id 6LYC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6LYC pdb_00006lyc 10.2210/pdb6lyc/pdb WWPDB D_1300015512 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6LYC _pdbx_database_status.recvd_initial_deposition_date 2020-02-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Murata, Y.' 1 ? 'Matsuda, M.' 2 ? 'Nakagawa, A.' 3 ? 'Matozaki, T.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Chem Biol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2451-9456 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 27 _citation.language ? _citation.page_first 1181 _citation.page_last 1191.e7 _citation.title 'Macrocyclic Peptide-Mediated Blockade of the CD47-SIRP alpha Interaction as a Potential Cancer Immunotherapy.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.chembiol.2020.06.008 _citation.pdbx_database_id_PubMed 32640189 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hazama, D.' 1 ? primary 'Yin, Y.' 2 ? primary 'Murata, Y.' 3 ? primary 'Matsuda, M.' 4 ? primary 'Okamoto, T.' 5 ? primary 'Tanaka, D.' 6 ? primary 'Terasaka, N.' 7 ? primary 'Zhao, J.' 8 ? primary 'Sakamoto, M.' 9 ? primary 'Kakuchi, Y.' 10 ? primary 'Saito, Y.' 11 ? primary 'Kotani, T.' 12 ? primary 'Nishimura, Y.' 13 ? primary 'Nakagawa, A.' 14 ? primary 'Suga, H.' 15 ? primary 'Matozaki, T.' 16 ? # _cell.entry_id 6LYC _cell.length_a 82.967 _cell.length_b 30.721 _cell.length_c 43.482 _cell.angle_alpha 90.00 _cell.angle_beta 100.26 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LYC _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SIRPa of the NOD mouse strain' 13355.909 1 ? ? ? ? 2 polymer syn D4-2 1815.042 1 ? ? ? ? 3 non-polymer nat 'ACETIC ACID' 60.052 1 ? ? ? ? 4 water nat water 18.015 70 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPLGSRTEVKVIQPEKSVSVAAGDSTVLNCTLTSLLPVGPIRWYRGVGQSRQLIYSFTTEHFPRVTNVSDATKRSNLDFS IRISNVTPEDAGTYYCVKFQRGSPDTEIQSGGGTEVYVLAAAAS ; ;GPLGSRTEVKVIQPEKSVSVAAGDSTVLNCTLTSLLPVGPIRWYRGVGQSRQLIYSFTTEHFPRVTNVSDATKRSNLDFS IRISNVTPEDAGTYYCVKFQRGSPDTEIQSGGGTEVYVLAAAAS ; A ? 2 'polypeptide(L)' no yes '(ACE)(DTY)RYSAVYSIHPSWCG(NH2)' XYRYSAVYSIHPSWCGX B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 ARG n 1 7 THR n 1 8 GLU n 1 9 VAL n 1 10 LYS n 1 11 VAL n 1 12 ILE n 1 13 GLN n 1 14 PRO n 1 15 GLU n 1 16 LYS n 1 17 SER n 1 18 VAL n 1 19 SER n 1 20 VAL n 1 21 ALA n 1 22 ALA n 1 23 GLY n 1 24 ASP n 1 25 SER n 1 26 THR n 1 27 VAL n 1 28 LEU n 1 29 ASN n 1 30 CYS n 1 31 THR n 1 32 LEU n 1 33 THR n 1 34 SER n 1 35 LEU n 1 36 LEU n 1 37 PRO n 1 38 VAL n 1 39 GLY n 1 40 PRO n 1 41 ILE n 1 42 ARG n 1 43 TRP n 1 44 TYR n 1 45 ARG n 1 46 GLY n 1 47 VAL n 1 48 GLY n 1 49 GLN n 1 50 SER n 1 51 ARG n 1 52 GLN n 1 53 LEU n 1 54 ILE n 1 55 TYR n 1 56 SER n 1 57 PHE n 1 58 THR n 1 59 THR n 1 60 GLU n 1 61 HIS n 1 62 PHE n 1 63 PRO n 1 64 ARG n 1 65 VAL n 1 66 THR n 1 67 ASN n 1 68 VAL n 1 69 SER n 1 70 ASP n 1 71 ALA n 1 72 THR n 1 73 LYS n 1 74 ARG n 1 75 SER n 1 76 ASN n 1 77 LEU n 1 78 ASP n 1 79 PHE n 1 80 SER n 1 81 ILE n 1 82 ARG n 1 83 ILE n 1 84 SER n 1 85 ASN n 1 86 VAL n 1 87 THR n 1 88 PRO n 1 89 GLU n 1 90 ASP n 1 91 ALA n 1 92 GLY n 1 93 THR n 1 94 TYR n 1 95 TYR n 1 96 CYS n 1 97 VAL n 1 98 LYS n 1 99 PHE n 1 100 GLN n 1 101 ARG n 1 102 GLY n 1 103 SER n 1 104 PRO n 1 105 ASP n 1 106 THR n 1 107 GLU n 1 108 ILE n 1 109 GLN n 1 110 SER n 1 111 GLY n 1 112 GLY n 1 113 GLY n 1 114 THR n 1 115 GLU n 1 116 VAL n 1 117 TYR n 1 118 VAL n 1 119 LEU n 1 120 ALA n 1 121 ALA n 1 122 ALA n 1 123 ALA n 1 124 SER n 2 1 ACE n 2 2 DTY n 2 3 ARG n 2 4 TYR n 2 5 SER n 2 6 ALA n 2 7 VAL n 2 8 TYR n 2 9 SER n 2 10 ILE n 2 11 HIS n 2 12 PRO n 2 13 SER n 2 14 TRP n 2 15 CYS n 2 16 GLY n 2 17 NH2 n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 124 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 17 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 6LYC 6LYC ? 1 ? 1 2 PDB 6LYC 6LYC ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6LYC A 1 ? 124 ? 6LYC 0 ? 123 ? 0 123 2 2 6LYC B 1 ? 17 ? 6LYC 101 ? 117 ? 101 117 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ACY non-polymer . 'ACETIC ACID' ? 'C2 H4 O2' 60.052 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DTY 'D-peptide linking' . D-TYROSINE ? 'C9 H11 N O3' 181.189 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6LYC _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.80 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 31.67 _exptl_crystal.description 'THE ENTRY CONTAINS FRIEDEL PAIRS IN I/F_PLUS/MINUS COLUMNS.' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.1 M imidazole, 0.1 M MES (pH 6.5), 0.09 M NaF, 0.09 M NaBr, 0.09 M NaI, 12.5% MPD (2-Methyl-2,4-pentanediol), 12.5% PEG1000, and 12.5% PEG3350 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details 'Double Mirrors, Si(111) double crystal monochromator' _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-12-18 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL44XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL44XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 6LYC _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.820 _reflns.d_resolution_high 1.360 _reflns.number_obs 22244 _reflns.number_all ? _reflns.percent_possible_obs 95.1 _reflns.pdbx_Rmerge_I_obs 0.04200 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.4000 _reflns.B_iso_Wilson_estimate 24.66 _reflns.pdbx_redundancy 3.400 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.36 _reflns_shell.d_res_low 1.44 _reflns_shell.percent_possible_all 97.0 _reflns_shell.Rmerge_I_obs 0.39300 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3.60 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 6LYC _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 22158 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.380 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.75 _refine.ls_d_res_high 1.36 _refine.ls_percent_reflns_obs 94.8 _refine.ls_R_factor_obs 0.204 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.204 _refine.ls_R_factor_R_free 0.216 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.820 _refine.ls_number_reflns_R_free 1068 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 38.60 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ;SF FILE CONTAINS FRIEDEL PAIRS UNDER I/F_MINUS AND I/F_PLUS COLUMNS. ; _refine.pdbx_starting_model 2YZ1 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.150 _refine.pdbx_overall_phase_error 34.130 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 978 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 70 _refine_hist.number_atoms_total 1055 _refine_hist.d_res_high 1.36 _refine_hist.d_res_low 28.75 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.010 ? ? 1074 'X-RAY DIFFRACTION' ? f_angle_d 1.119 ? ? 1473 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 19.300 ? ? 395 'X-RAY DIFFRACTION' ? f_chiral_restr 0.100 ? ? 168 'X-RAY DIFFRACTION' ? f_plane_restr 0.009 ? ? 189 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.3600 1.4200 2653 0.3122 96.00 0.3329 . . 131 . . 'X-RAY DIFFRACTION' . 1.4200 1.5000 2659 0.2850 97.00 0.3034 . . 119 . . 'X-RAY DIFFRACTION' . 1.5000 1.5900 2647 0.2629 96.00 0.3005 . . 148 . . 'X-RAY DIFFRACTION' . 1.5900 1.7200 2654 0.2649 95.00 0.2915 . . 123 . . 'X-RAY DIFFRACTION' . 1.7200 1.8900 2547 0.2497 92.00 0.2895 . . 132 . . 'X-RAY DIFFRACTION' . 1.8900 2.1600 2528 0.2168 92.00 0.2345 . . 135 . . 'X-RAY DIFFRACTION' . 2.1600 2.7200 2697 0.2208 96.00 0.2291 . . 133 . . 'X-RAY DIFFRACTION' . 2.7200 28.7500 2705 0.1747 95.00 0.1845 . . 147 . . # _struct.entry_id 6LYC _struct.title 'Crystal structure of the NOD SIRPa complex with D4-2' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6LYC _struct_keywords.text 'complex, CELL ADHESION' _struct_keywords.pdbx_keywords 'CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 63 ? ASN A 67 ? PRO A 62 ASN A 66 5 ? 5 HELX_P HELX_P2 AA2 ARG A 74 ? ASP A 78 ? ARG A 73 ASP A 77 5 ? 5 HELX_P HELX_P3 AA3 THR A 87 ? ALA A 91 ? THR A 86 ALA A 90 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 30 SG ? ? ? 1_555 A CYS 96 SG ? ? A CYS 29 A CYS 95 1_555 ? ? ? ? ? ? ? 1.985 ? ? covale1 covale both ? B ACE 1 C ? ? ? 1_555 B DTY 2 N ? ? B ACE 101 B DTY 102 1_555 ? ? ? ? ? ? ? 1.425 ? ? covale2 covale both ? B DTY 2 C ? ? ? 1_555 B ARG 3 N ? ? B DTY 102 B ARG 103 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale3 covale both ? B GLY 16 C ? ? ? 1_555 B NH2 17 N ? ? B GLY 116 B NH2 117 1_555 ? ? ? ? ? ? ? 1.336 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LEU 36 A . ? LEU 35 A PRO 37 A ? PRO 36 A 1 -3.75 2 SER 103 A . ? SER 102 A PRO 104 A ? PRO 103 A 1 -1.23 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 4 ? AA3 ? 6 ? AA4 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 11 ? ILE A 12 ? VAL A 10 ILE A 11 AA1 2 THR A 31 ? LEU A 32 ? THR A 30 LEU A 31 AA2 1 SER A 17 ? ALA A 21 ? SER A 16 ALA A 20 AA2 2 THR A 114 ? LEU A 119 ? THR A 113 LEU A 118 AA2 3 GLY A 92 ? GLN A 100 ? GLY A 91 GLN A 99 AA2 4 THR A 106 ? SER A 110 ? THR A 105 SER A 109 AA3 1 SER A 17 ? ALA A 21 ? SER A 16 ALA A 20 AA3 2 THR A 114 ? LEU A 119 ? THR A 113 LEU A 118 AA3 3 GLY A 92 ? GLN A 100 ? GLY A 91 GLN A 99 AA3 4 ILE A 41 ? ARG A 45 ? ILE A 40 ARG A 44 AA3 5 GLN A 52 ? PHE A 57 ? GLN A 51 PHE A 56 AA3 6 SER B 13 ? CYS B 15 ? SER B 113 CYS B 115 AA4 1 THR A 26 ? LEU A 28 ? THR A 25 LEU A 27 AA4 2 ILE A 81 ? ILE A 83 ? ILE A 80 ILE A 82 AA4 3 TYR B 4 ? ALA B 6 ? TYR B 104 ALA B 106 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 12 ? N ILE A 11 O THR A 31 ? O THR A 30 AA2 1 2 N VAL A 18 ? N VAL A 17 O TYR A 117 ? O TYR A 116 AA2 2 3 O VAL A 116 ? O VAL A 115 N GLY A 92 ? N GLY A 91 AA2 3 4 N LYS A 98 ? N LYS A 97 O GLN A 109 ? O GLN A 108 AA3 1 2 N VAL A 18 ? N VAL A 17 O TYR A 117 ? O TYR A 116 AA3 2 3 O VAL A 116 ? O VAL A 115 N GLY A 92 ? N GLY A 91 AA3 3 4 O VAL A 97 ? O VAL A 96 N ARG A 42 ? N ARG A 41 AA3 4 5 N TRP A 43 ? N TRP A 42 O ILE A 54 ? O ILE A 53 AA3 5 6 N SER A 56 ? N SER A 55 O TRP B 14 ? O TRP B 114 AA4 1 2 N LEU A 28 ? N LEU A 27 O ILE A 81 ? O ILE A 80 AA4 2 3 N ARG A 82 ? N ARG A 81 O SER B 5 ? O SER B 105 # _atom_sites.entry_id 6LYC _atom_sites.fract_transf_matrix[1][1] 0.012053 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002181 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.032551 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023371 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 PRO 2 1 ? ? ? A . n A 1 3 LEU 3 2 ? ? ? A . n A 1 4 GLY 4 3 ? ? ? A . n A 1 5 SER 5 4 ? ? ? A . n A 1 6 ARG 6 5 ? ? ? A . n A 1 7 THR 7 6 6 THR THR A . n A 1 8 GLU 8 7 7 GLU GLU A . n A 1 9 VAL 9 8 8 VAL VAL A . n A 1 10 LYS 10 9 9 LYS LYS A . n A 1 11 VAL 11 10 10 VAL VAL A . n A 1 12 ILE 12 11 11 ILE ILE A . n A 1 13 GLN 13 12 12 GLN GLN A . n A 1 14 PRO 14 13 13 PRO PRO A . n A 1 15 GLU 15 14 14 GLU GLU A . n A 1 16 LYS 16 15 15 LYS LYS A . n A 1 17 SER 17 16 16 SER SER A . n A 1 18 VAL 18 17 17 VAL VAL A . n A 1 19 SER 19 18 18 SER SER A . n A 1 20 VAL 20 19 19 VAL VAL A . n A 1 21 ALA 21 20 20 ALA ALA A . n A 1 22 ALA 22 21 21 ALA ALA A . n A 1 23 GLY 23 22 22 GLY GLY A . n A 1 24 ASP 24 23 23 ASP ASP A . n A 1 25 SER 25 24 24 SER SER A . n A 1 26 THR 26 25 25 THR THR A . n A 1 27 VAL 27 26 26 VAL VAL A . n A 1 28 LEU 28 27 27 LEU LEU A . n A 1 29 ASN 29 28 28 ASN ASN A . n A 1 30 CYS 30 29 29 CYS CYS A . n A 1 31 THR 31 30 30 THR THR A . n A 1 32 LEU 32 31 31 LEU LEU A . n A 1 33 THR 33 32 32 THR THR A . n A 1 34 SER 34 33 33 SER SER A . n A 1 35 LEU 35 34 34 LEU LEU A . n A 1 36 LEU 36 35 35 LEU LEU A . n A 1 37 PRO 37 36 36 PRO PRO A . n A 1 38 VAL 38 37 37 VAL VAL A . n A 1 39 GLY 39 38 38 GLY GLY A . n A 1 40 PRO 40 39 39 PRO PRO A . n A 1 41 ILE 41 40 40 ILE ILE A . n A 1 42 ARG 42 41 41 ARG ARG A . n A 1 43 TRP 43 42 42 TRP TRP A . n A 1 44 TYR 44 43 43 TYR TYR A . n A 1 45 ARG 45 44 44 ARG ARG A . n A 1 46 GLY 46 45 45 GLY GLY A . n A 1 47 VAL 47 46 46 VAL VAL A . n A 1 48 GLY 48 47 ? ? ? A . n A 1 49 GLN 49 48 ? ? ? A . n A 1 50 SER 50 49 49 SER SER A . n A 1 51 ARG 51 50 50 ARG ARG A . n A 1 52 GLN 52 51 51 GLN GLN A . n A 1 53 LEU 53 52 52 LEU LEU A . n A 1 54 ILE 54 53 53 ILE ILE A . n A 1 55 TYR 55 54 54 TYR TYR A . n A 1 56 SER 56 55 55 SER SER A . n A 1 57 PHE 57 56 56 PHE PHE A . n A 1 58 THR 58 57 57 THR THR A . n A 1 59 THR 59 58 58 THR THR A . n A 1 60 GLU 60 59 59 GLU GLU A . n A 1 61 HIS 61 60 60 HIS HIS A . n A 1 62 PHE 62 61 61 PHE PHE A . n A 1 63 PRO 63 62 62 PRO PRO A . n A 1 64 ARG 64 63 63 ARG ARG A . n A 1 65 VAL 65 64 64 VAL VAL A . n A 1 66 THR 66 65 65 THR THR A . n A 1 67 ASN 67 66 66 ASN ASN A . n A 1 68 VAL 68 67 67 VAL VAL A . n A 1 69 SER 69 68 ? ? ? A . n A 1 70 ASP 70 69 ? ? ? A . n A 1 71 ALA 71 70 70 ALA ALA A . n A 1 72 THR 72 71 71 THR THR A . n A 1 73 LYS 73 72 72 LYS LYS A . n A 1 74 ARG 74 73 73 ARG ARG A . n A 1 75 SER 75 74 74 SER SER A . n A 1 76 ASN 76 75 75 ASN ASN A . n A 1 77 LEU 77 76 76 LEU LEU A . n A 1 78 ASP 78 77 77 ASP ASP A . n A 1 79 PHE 79 78 78 PHE PHE A . n A 1 80 SER 80 79 79 SER SER A . n A 1 81 ILE 81 80 80 ILE ILE A . n A 1 82 ARG 82 81 81 ARG ARG A . n A 1 83 ILE 83 82 82 ILE ILE A . n A 1 84 SER 84 83 83 SER SER A . n A 1 85 ASN 85 84 84 ASN ASN A . n A 1 86 VAL 86 85 85 VAL VAL A . n A 1 87 THR 87 86 86 THR THR A . n A 1 88 PRO 88 87 87 PRO PRO A . n A 1 89 GLU 89 88 88 GLU GLU A . n A 1 90 ASP 90 89 89 ASP ASP A . n A 1 91 ALA 91 90 90 ALA ALA A . n A 1 92 GLY 92 91 91 GLY GLY A . n A 1 93 THR 93 92 92 THR THR A . n A 1 94 TYR 94 93 93 TYR TYR A . n A 1 95 TYR 95 94 94 TYR TYR A . n A 1 96 CYS 96 95 95 CYS CYS A . n A 1 97 VAL 97 96 96 VAL VAL A . n A 1 98 LYS 98 97 97 LYS LYS A . n A 1 99 PHE 99 98 98 PHE PHE A . n A 1 100 GLN 100 99 99 GLN GLN A . n A 1 101 ARG 101 100 100 ARG ARG A . n A 1 102 GLY 102 101 101 GLY GLY A . n A 1 103 SER 103 102 102 SER SER A . n A 1 104 PRO 104 103 103 PRO PRO A . n A 1 105 ASP 105 104 104 ASP ASP A . n A 1 106 THR 106 105 105 THR THR A . n A 1 107 GLU 107 106 106 GLU GLU A . n A 1 108 ILE 108 107 107 ILE ILE A . n A 1 109 GLN 109 108 108 GLN GLN A . n A 1 110 SER 110 109 109 SER SER A . n A 1 111 GLY 111 110 110 GLY GLY A . n A 1 112 GLY 112 111 111 GLY GLY A . n A 1 113 GLY 113 112 112 GLY GLY A . n A 1 114 THR 114 113 113 THR THR A . n A 1 115 GLU 115 114 114 GLU GLU A . n A 1 116 VAL 116 115 115 VAL VAL A . n A 1 117 TYR 117 116 116 TYR TYR A . n A 1 118 VAL 118 117 117 VAL VAL A . n A 1 119 LEU 119 118 118 LEU LEU A . n A 1 120 ALA 120 119 119 ALA ALA A . n A 1 121 ALA 121 120 ? ? ? A . n A 1 122 ALA 122 121 ? ? ? A . n A 1 123 ALA 123 122 ? ? ? A . n A 1 124 SER 124 123 ? ? ? A . n B 2 1 ACE 1 101 101 ACE ACE B . n B 2 2 DTY 2 102 1 DTY DTY B . n B 2 3 ARG 3 103 2 ARG ARG B . n B 2 4 TYR 4 104 3 TYR TYR B . n B 2 5 SER 5 105 4 SER SER B . n B 2 6 ALA 6 106 5 ALA ALA B . n B 2 7 VAL 7 107 6 VAL VAL B . n B 2 8 TYR 8 108 7 TYR TYR B . n B 2 9 SER 9 109 8 SER SER B . n B 2 10 ILE 10 110 9 ILE ILE B . n B 2 11 HIS 11 111 10 HIS HIS B . n B 2 12 PRO 12 112 11 PRO PRO B . n B 2 13 SER 13 113 12 SER SER B . n B 2 14 TRP 14 114 13 TRP TRP B . n B 2 15 CYS 15 115 14 CYS CYS B . n B 2 16 GLY 16 116 15 GLY GLY B . n B 2 17 NH2 17 117 16 NH2 NH2 B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ACY 1 201 201 ACY ACY A . D 4 HOH 1 301 301 HOH HOH A . D 4 HOH 2 302 302 HOH HOH A . D 4 HOH 3 303 303 HOH HOH A . D 4 HOH 4 304 304 HOH HOH A . D 4 HOH 5 305 305 HOH HOH A . D 4 HOH 6 306 306 HOH HOH A . D 4 HOH 7 307 307 HOH HOH A . D 4 HOH 8 308 308 HOH HOH A . D 4 HOH 9 309 309 HOH HOH A . D 4 HOH 10 310 310 HOH HOH A . D 4 HOH 11 311 311 HOH HOH A . D 4 HOH 12 312 312 HOH HOH A . D 4 HOH 13 313 313 HOH HOH A . D 4 HOH 14 314 314 HOH HOH A . D 4 HOH 15 315 315 HOH HOH A . D 4 HOH 16 316 316 HOH HOH A . D 4 HOH 17 317 317 HOH HOH A . D 4 HOH 18 318 318 HOH HOH A . D 4 HOH 19 319 319 HOH HOH A . D 4 HOH 20 320 320 HOH HOH A . D 4 HOH 21 321 321 HOH HOH A . D 4 HOH 22 322 322 HOH HOH A . D 4 HOH 23 323 323 HOH HOH A . D 4 HOH 24 324 324 HOH HOH A . D 4 HOH 25 325 325 HOH HOH A . D 4 HOH 26 326 326 HOH HOH A . D 4 HOH 27 327 327 HOH HOH A . D 4 HOH 28 328 328 HOH HOH A . D 4 HOH 29 329 329 HOH HOH A . D 4 HOH 30 330 330 HOH HOH A . D 4 HOH 31 331 331 HOH HOH A . D 4 HOH 32 332 332 HOH HOH A . D 4 HOH 33 333 333 HOH HOH A . D 4 HOH 34 334 334 HOH HOH A . D 4 HOH 35 335 335 HOH HOH A . D 4 HOH 36 336 336 HOH HOH A . D 4 HOH 37 337 337 HOH HOH A . D 4 HOH 38 338 338 HOH HOH A . D 4 HOH 39 339 339 HOH HOH A . D 4 HOH 40 340 340 HOH HOH A . D 4 HOH 41 341 341 HOH HOH A . D 4 HOH 42 342 342 HOH HOH A . D 4 HOH 43 343 343 HOH HOH A . D 4 HOH 44 344 344 HOH HOH A . D 4 HOH 45 345 345 HOH HOH A . D 4 HOH 46 346 346 HOH HOH A . D 4 HOH 47 347 347 HOH HOH A . D 4 HOH 48 348 348 HOH HOH A . D 4 HOH 49 349 349 HOH HOH A . D 4 HOH 50 350 350 HOH HOH A . D 4 HOH 51 351 351 HOH HOH A . D 4 HOH 52 352 352 HOH HOH A . D 4 HOH 53 353 353 HOH HOH A . D 4 HOH 54 354 354 HOH HOH A . D 4 HOH 55 355 355 HOH HOH A . E 4 HOH 1 201 201 HOH HOH B . E 4 HOH 2 202 202 HOH HOH B . E 4 HOH 3 203 203 HOH HOH B . E 4 HOH 4 204 204 HOH HOH B . E 4 HOH 5 205 205 HOH HOH B . E 4 HOH 6 206 206 HOH HOH B . E 4 HOH 7 207 207 HOH HOH B . E 4 HOH 8 208 208 HOH HOH B . E 4 HOH 9 209 209 HOH HOH B . E 4 HOH 10 210 210 HOH HOH B . E 4 HOH 11 211 211 HOH HOH B . E 4 HOH 12 212 212 HOH HOH B . E 4 HOH 13 213 213 HOH HOH B . E 4 HOH 14 214 214 HOH HOH B . E 4 HOH 15 215 215 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2110 ? 1 MORE -9 ? 1 'SSA (A^2)' 7090 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-07-01 2 'Structure model' 1 1 2020-07-29 3 'Structure model' 1 2 2020-09-30 4 'Structure model' 2 0 2023-04-05 5 'Structure model' 2 1 2023-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' 'Refinement description' 4 3 'Structure model' 'Database references' 5 4 'Structure model' Advisory 6 4 'Structure model' 'Atomic model' 7 4 'Structure model' 'Author supporting evidence' 8 4 'Structure model' 'Data collection' 9 4 'Structure model' 'Database references' 10 4 'Structure model' 'Derived calculations' 11 4 'Structure model' 'Non-polymer description' 12 4 'Structure model' 'Polymer sequence' 13 4 'Structure model' 'Refinement description' 14 4 'Structure model' 'Source and taxonomy' 15 4 'Structure model' 'Structure summary' 16 5 'Structure model' 'Data collection' 17 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' software 4 2 'Structure model' struct_conn 5 3 'Structure model' citation 6 4 'Structure model' atom_site 7 4 'Structure model' atom_site_anisotrop 8 4 'Structure model' chem_comp 9 4 'Structure model' database_2 10 4 'Structure model' entity 11 4 'Structure model' entity_poly 12 4 'Structure model' entity_poly_seq 13 4 'Structure model' pdbx_entity_instance_feature 14 4 'Structure model' pdbx_entity_src_syn 15 4 'Structure model' pdbx_nonpoly_scheme 16 4 'Structure model' pdbx_poly_seq_scheme 17 4 'Structure model' pdbx_refine_tls_group 18 4 'Structure model' pdbx_struct_assembly_gen 19 4 'Structure model' pdbx_struct_sheet_hbond 20 4 'Structure model' pdbx_validate_close_contact 21 4 'Structure model' refine 22 4 'Structure model' refine_ls_shell 23 4 'Structure model' reflns 24 4 'Structure model' reflns_shell 25 4 'Structure model' struct_asym 26 4 'Structure model' struct_conn 27 4 'Structure model' struct_ref_seq 28 4 'Structure model' struct_sheet_range 29 4 'Structure model' struct_site 30 4 'Structure model' struct_site_gen 31 5 'Structure model' chem_comp_atom 32 5 'Structure model' chem_comp_bond 33 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_DOI' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 2 'Structure model' '_software.name' 5 2 'Structure model' '_struct_conn.pdbx_dist_value' 6 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 8 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 9 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 10 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 11 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 12 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 13 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 14 3 'Structure model' '_citation.journal_volume' 15 3 'Structure model' '_citation.page_first' 16 3 'Structure model' '_citation.page_last' 17 4 'Structure model' '_atom_site.B_iso_or_equiv' 18 4 'Structure model' '_atom_site.Cartn_x' 19 4 'Structure model' '_atom_site.Cartn_y' 20 4 'Structure model' '_atom_site.Cartn_z' 21 4 'Structure model' '_atom_site.auth_asym_id' 22 4 'Structure model' '_atom_site.auth_atom_id' 23 4 'Structure model' '_atom_site.auth_comp_id' 24 4 'Structure model' '_atom_site.auth_seq_id' 25 4 'Structure model' '_atom_site.group_PDB' 26 4 'Structure model' '_atom_site.label_alt_id' 27 4 'Structure model' '_atom_site.label_asym_id' 28 4 'Structure model' '_atom_site.label_atom_id' 29 4 'Structure model' '_atom_site.label_comp_id' 30 4 'Structure model' '_atom_site.label_entity_id' 31 4 'Structure model' '_atom_site.label_seq_id' 32 4 'Structure model' '_atom_site.occupancy' 33 4 'Structure model' '_atom_site.type_symbol' 34 4 'Structure model' '_atom_site_anisotrop.U[1][1]' 35 4 'Structure model' '_atom_site_anisotrop.U[1][2]' 36 4 'Structure model' '_atom_site_anisotrop.U[1][3]' 37 4 'Structure model' '_atom_site_anisotrop.U[2][2]' 38 4 'Structure model' '_atom_site_anisotrop.U[2][3]' 39 4 'Structure model' '_atom_site_anisotrop.U[3][3]' 40 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 41 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 42 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 43 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 44 4 'Structure model' '_atom_site_anisotrop.pdbx_label_alt_id' 45 4 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 46 4 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 47 4 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 48 4 'Structure model' '_atom_site_anisotrop.pdbx_label_seq_id' 49 4 'Structure model' '_atom_site_anisotrop.type_symbol' 50 4 'Structure model' '_chem_comp.formula' 51 4 'Structure model' '_chem_comp.formula_weight' 52 4 'Structure model' '_chem_comp.id' 53 4 'Structure model' '_chem_comp.mon_nstd_flag' 54 4 'Structure model' '_chem_comp.name' 55 4 'Structure model' '_chem_comp.type' 56 4 'Structure model' '_database_2.pdbx_DOI' 57 4 'Structure model' '_database_2.pdbx_database_accession' 58 4 'Structure model' '_entity.formula_weight' 59 4 'Structure model' '_entity.pdbx_number_of_molecules' 60 4 'Structure model' '_entity_poly.pdbx_seq_one_letter_code' 61 4 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 62 4 'Structure model' '_pdbx_entity_src_syn.pdbx_end_seq_num' 63 4 'Structure model' '_pdbx_refine_tls_group.selection_details' 64 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 65 4 'Structure model' '_pdbx_struct_sheet_hbond.range_2_auth_seq_id' 66 4 'Structure model' '_pdbx_struct_sheet_hbond.range_2_label_seq_id' 67 4 'Structure model' '_pdbx_validate_close_contact.auth_atom_id_1' 68 4 'Structure model' '_pdbx_validate_close_contact.auth_atom_id_2' 69 4 'Structure model' '_pdbx_validate_close_contact.auth_comp_id_1' 70 4 'Structure model' '_pdbx_validate_close_contact.auth_comp_id_2' 71 4 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 72 4 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 73 4 'Structure model' '_refine.details' 74 4 'Structure model' '_refine.ls_R_factor_R_free_error' 75 4 'Structure model' '_refine.ls_R_factor_R_work' 76 4 'Structure model' '_refine.ls_R_factor_obs' 77 4 'Structure model' '_refine.ls_percent_reflns_obs' 78 4 'Structure model' '_refine.pdbx_starting_model' 79 4 'Structure model' '_refine_ls_shell.R_factor_R_free_error' 80 4 'Structure model' '_refine_ls_shell.percent_reflns_R_free' 81 4 'Structure model' '_reflns.pdbx_CC_half' 82 4 'Structure model' '_reflns.pdbx_Rpim_I_all' 83 4 'Structure model' '_reflns.pdbx_Rrim_I_all' 84 4 'Structure model' '_reflns.pdbx_chi_squared' 85 4 'Structure model' '_reflns_shell.number_unique_obs' 86 4 'Structure model' '_reflns_shell.pdbx_CC_half' 87 4 'Structure model' '_reflns_shell.pdbx_Rpim_I_all' 88 4 'Structure model' '_reflns_shell.pdbx_Rrim_I_all' 89 4 'Structure model' '_reflns_shell.pdbx_chi_squared' 90 4 'Structure model' '_struct_conn.pdbx_dist_value' 91 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 92 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 93 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 94 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 95 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 96 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 97 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 98 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 99 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 100 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 101 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 102 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 103 4 'Structure model' '_struct_ref_seq.db_align_beg' 104 4 'Structure model' '_struct_ref_seq.db_align_end' 105 4 'Structure model' '_struct_ref_seq.pdbx_auth_seq_align_beg' 106 4 'Structure model' '_struct_ref_seq.pdbx_auth_seq_align_end' 107 4 'Structure model' '_struct_ref_seq.seq_align_end' 108 4 'Structure model' '_struct_sheet_range.beg_auth_seq_id' 109 4 'Structure model' '_struct_sheet_range.beg_label_seq_id' 110 4 'Structure model' '_struct_sheet_range.end_auth_seq_id' 111 4 'Structure model' '_struct_sheet_range.end_label_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 11.9643 _pdbx_refine_tls.origin_y -13.3855 _pdbx_refine_tls.origin_z -10.7054 _pdbx_refine_tls.T[1][1] 0.1817 _pdbx_refine_tls.T[2][2] 0.2229 _pdbx_refine_tls.T[3][3] 0.2794 _pdbx_refine_tls.T[1][2] 0.0032 _pdbx_refine_tls.T[1][3] 0.0066 _pdbx_refine_tls.T[2][3] 0.0622 _pdbx_refine_tls.L[1][1] 3.0711 _pdbx_refine_tls.L[2][2] 2.8527 _pdbx_refine_tls.L[3][3] 3.6714 _pdbx_refine_tls.L[1][2] -0.6565 _pdbx_refine_tls.L[1][3] 0.1787 _pdbx_refine_tls.L[2][3] 1.1780 _pdbx_refine_tls.S[1][1] -0.0624 _pdbx_refine_tls.S[1][2] -0.1153 _pdbx_refine_tls.S[1][3] -0.0470 _pdbx_refine_tls.S[2][1] 0.0055 _pdbx_refine_tls.S[2][2] 0.1102 _pdbx_refine_tls.S[2][3] -0.0140 _pdbx_refine_tls.S[3][1] 0.0580 _pdbx_refine_tls.S[3][2] 0.1977 _pdbx_refine_tls.S[3][3] -0.0334 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ALL # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1-3660 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 'VERSION Jan 26, 2018 BUILT=20180808' 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? snapshot_20181127 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? 11.6.04 4 # _pdbx_entry_details.entry_id 6LYC _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CH3 B ACE 101 ? ? SG B CYS 115 ? ? 1.77 2 1 OE1 A GLU 14 ? ? O A HOH 301 ? ? 2.08 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id B _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 215 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.82 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A PRO 1 ? A PRO 2 3 1 Y 1 A LEU 2 ? A LEU 3 4 1 Y 1 A GLY 3 ? A GLY 4 5 1 Y 1 A SER 4 ? A SER 5 6 1 Y 1 A ARG 5 ? A ARG 6 7 1 Y 1 A GLY 47 ? A GLY 48 8 1 Y 1 A GLN 48 ? A GLN 49 9 1 Y 1 A SER 68 ? A SER 69 10 1 Y 1 A ASP 69 ? A ASP 70 11 1 Y 1 A ALA 120 ? A ALA 121 12 1 Y 1 A ALA 121 ? A ALA 122 13 1 Y 1 A ALA 122 ? A ALA 123 14 1 Y 1 A SER 123 ? A SER 124 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ACY C C N N 8 ACY O O N N 9 ACY OXT O N N 10 ACY CH3 C N N 11 ACY HXT H N N 12 ACY H1 H N N 13 ACY H2 H N N 14 ACY H3 H N N 15 ALA N N N N 16 ALA CA C N S 17 ALA C C N N 18 ALA O O N N 19 ALA CB C N N 20 ALA OXT O N N 21 ALA H H N N 22 ALA H2 H N N 23 ALA HA H N N 24 ALA HB1 H N N 25 ALA HB2 H N N 26 ALA HB3 H N N 27 ALA HXT H N N 28 ARG N N N N 29 ARG CA C N S 30 ARG C C N N 31 ARG O O N N 32 ARG CB C N N 33 ARG CG C N N 34 ARG CD C N N 35 ARG NE N N N 36 ARG CZ C N N 37 ARG NH1 N N N 38 ARG NH2 N N N 39 ARG OXT O N N 40 ARG H H N N 41 ARG H2 H N N 42 ARG HA H N N 43 ARG HB2 H N N 44 ARG HB3 H N N 45 ARG HG2 H N N 46 ARG HG3 H N N 47 ARG HD2 H N N 48 ARG HD3 H N N 49 ARG HE H N N 50 ARG HH11 H N N 51 ARG HH12 H N N 52 ARG HH21 H N N 53 ARG HH22 H N N 54 ARG HXT H N N 55 ASN N N N N 56 ASN CA C N S 57 ASN C C N N 58 ASN O O N N 59 ASN CB C N N 60 ASN CG C N N 61 ASN OD1 O N N 62 ASN ND2 N N N 63 ASN OXT O N N 64 ASN H H N N 65 ASN H2 H N N 66 ASN HA H N N 67 ASN HB2 H N N 68 ASN HB3 H N N 69 ASN HD21 H N N 70 ASN HD22 H N N 71 ASN HXT H N N 72 ASP N N N N 73 ASP CA C N S 74 ASP C C N N 75 ASP O O N N 76 ASP CB C N N 77 ASP CG C N N 78 ASP OD1 O N N 79 ASP OD2 O N N 80 ASP OXT O N N 81 ASP H H N N 82 ASP H2 H N N 83 ASP HA H N N 84 ASP HB2 H N N 85 ASP HB3 H N N 86 ASP HD2 H N N 87 ASP HXT H N N 88 CYS N N N N 89 CYS CA C N R 90 CYS C C N N 91 CYS O O N N 92 CYS CB C N N 93 CYS SG S N N 94 CYS OXT O N N 95 CYS H H N N 96 CYS H2 H N N 97 CYS HA H N N 98 CYS HB2 H N N 99 CYS HB3 H N N 100 CYS HG H N N 101 CYS HXT H N N 102 DTY N N N N 103 DTY CA C N R 104 DTY C C N N 105 DTY O O N N 106 DTY CB C N N 107 DTY CG C Y N 108 DTY CD1 C Y N 109 DTY CD2 C Y N 110 DTY CE1 C Y N 111 DTY CE2 C Y N 112 DTY CZ C Y N 113 DTY OH O N N 114 DTY OXT O N N 115 DTY H H N N 116 DTY H2 H N N 117 DTY HA H N N 118 DTY HB2 H N N 119 DTY HB3 H N N 120 DTY HD1 H N N 121 DTY HD2 H N N 122 DTY HE1 H N N 123 DTY HE2 H N N 124 DTY HH H N N 125 DTY HXT H N N 126 GLN N N N N 127 GLN CA C N S 128 GLN C C N N 129 GLN O O N N 130 GLN CB C N N 131 GLN CG C N N 132 GLN CD C N N 133 GLN OE1 O N N 134 GLN NE2 N N N 135 GLN OXT O N N 136 GLN H H N N 137 GLN H2 H N N 138 GLN HA H N N 139 GLN HB2 H N N 140 GLN HB3 H N N 141 GLN HG2 H N N 142 GLN HG3 H N N 143 GLN HE21 H N N 144 GLN HE22 H N N 145 GLN HXT H N N 146 GLU N N N N 147 GLU CA C N S 148 GLU C C N N 149 GLU O O N N 150 GLU CB C N N 151 GLU CG C N N 152 GLU CD C N N 153 GLU OE1 O N N 154 GLU OE2 O N N 155 GLU OXT O N N 156 GLU H H N N 157 GLU H2 H N N 158 GLU HA H N N 159 GLU HB2 H N N 160 GLU HB3 H N N 161 GLU HG2 H N N 162 GLU HG3 H N N 163 GLU HE2 H N N 164 GLU HXT H N N 165 GLY N N N N 166 GLY CA C N N 167 GLY C C N N 168 GLY O O N N 169 GLY OXT O N N 170 GLY H H N N 171 GLY H2 H N N 172 GLY HA2 H N N 173 GLY HA3 H N N 174 GLY HXT H N N 175 HIS N N N N 176 HIS CA C N S 177 HIS C C N N 178 HIS O O N N 179 HIS CB C N N 180 HIS CG C Y N 181 HIS ND1 N Y N 182 HIS CD2 C Y N 183 HIS CE1 C Y N 184 HIS NE2 N Y N 185 HIS OXT O N N 186 HIS H H N N 187 HIS H2 H N N 188 HIS HA H N N 189 HIS HB2 H N N 190 HIS HB3 H N N 191 HIS HD1 H N N 192 HIS HD2 H N N 193 HIS HE1 H N N 194 HIS HE2 H N N 195 HIS HXT H N N 196 HOH O O N N 197 HOH H1 H N N 198 HOH H2 H N N 199 ILE N N N N 200 ILE CA C N S 201 ILE C C N N 202 ILE O O N N 203 ILE CB C N S 204 ILE CG1 C N N 205 ILE CG2 C N N 206 ILE CD1 C N N 207 ILE OXT O N N 208 ILE H H N N 209 ILE H2 H N N 210 ILE HA H N N 211 ILE HB H N N 212 ILE HG12 H N N 213 ILE HG13 H N N 214 ILE HG21 H N N 215 ILE HG22 H N N 216 ILE HG23 H N N 217 ILE HD11 H N N 218 ILE HD12 H N N 219 ILE HD13 H N N 220 ILE HXT H N N 221 LEU N N N N 222 LEU CA C N S 223 LEU C C N N 224 LEU O O N N 225 LEU CB C N N 226 LEU CG C N N 227 LEU CD1 C N N 228 LEU CD2 C N N 229 LEU OXT O N N 230 LEU H H N N 231 LEU H2 H N N 232 LEU HA H N N 233 LEU HB2 H N N 234 LEU HB3 H N N 235 LEU HG H N N 236 LEU HD11 H N N 237 LEU HD12 H N N 238 LEU HD13 H N N 239 LEU HD21 H N N 240 LEU HD22 H N N 241 LEU HD23 H N N 242 LEU HXT H N N 243 LYS N N N N 244 LYS CA C N S 245 LYS C C N N 246 LYS O O N N 247 LYS CB C N N 248 LYS CG C N N 249 LYS CD C N N 250 LYS CE C N N 251 LYS NZ N N N 252 LYS OXT O N N 253 LYS H H N N 254 LYS H2 H N N 255 LYS HA H N N 256 LYS HB2 H N N 257 LYS HB3 H N N 258 LYS HG2 H N N 259 LYS HG3 H N N 260 LYS HD2 H N N 261 LYS HD3 H N N 262 LYS HE2 H N N 263 LYS HE3 H N N 264 LYS HZ1 H N N 265 LYS HZ2 H N N 266 LYS HZ3 H N N 267 LYS HXT H N N 268 NH2 N N N N 269 NH2 HN1 H N N 270 NH2 HN2 H N N 271 PHE N N N N 272 PHE CA C N S 273 PHE C C N N 274 PHE O O N N 275 PHE CB C N N 276 PHE CG C Y N 277 PHE CD1 C Y N 278 PHE CD2 C Y N 279 PHE CE1 C Y N 280 PHE CE2 C Y N 281 PHE CZ C Y N 282 PHE OXT O N N 283 PHE H H N N 284 PHE H2 H N N 285 PHE HA H N N 286 PHE HB2 H N N 287 PHE HB3 H N N 288 PHE HD1 H N N 289 PHE HD2 H N N 290 PHE HE1 H N N 291 PHE HE2 H N N 292 PHE HZ H N N 293 PHE HXT H N N 294 PRO N N N N 295 PRO CA C N S 296 PRO C C N N 297 PRO O O N N 298 PRO CB C N N 299 PRO CG C N N 300 PRO CD C N N 301 PRO OXT O N N 302 PRO H H N N 303 PRO HA H N N 304 PRO HB2 H N N 305 PRO HB3 H N N 306 PRO HG2 H N N 307 PRO HG3 H N N 308 PRO HD2 H N N 309 PRO HD3 H N N 310 PRO HXT H N N 311 SER N N N N 312 SER CA C N S 313 SER C C N N 314 SER O O N N 315 SER CB C N N 316 SER OG O N N 317 SER OXT O N N 318 SER H H N N 319 SER H2 H N N 320 SER HA H N N 321 SER HB2 H N N 322 SER HB3 H N N 323 SER HG H N N 324 SER HXT H N N 325 THR N N N N 326 THR CA C N S 327 THR C C N N 328 THR O O N N 329 THR CB C N R 330 THR OG1 O N N 331 THR CG2 C N N 332 THR OXT O N N 333 THR H H N N 334 THR H2 H N N 335 THR HA H N N 336 THR HB H N N 337 THR HG1 H N N 338 THR HG21 H N N 339 THR HG22 H N N 340 THR HG23 H N N 341 THR HXT H N N 342 TRP N N N N 343 TRP CA C N S 344 TRP C C N N 345 TRP O O N N 346 TRP CB C N N 347 TRP CG C Y N 348 TRP CD1 C Y N 349 TRP CD2 C Y N 350 TRP NE1 N Y N 351 TRP CE2 C Y N 352 TRP CE3 C Y N 353 TRP CZ2 C Y N 354 TRP CZ3 C Y N 355 TRP CH2 C Y N 356 TRP OXT O N N 357 TRP H H N N 358 TRP H2 H N N 359 TRP HA H N N 360 TRP HB2 H N N 361 TRP HB3 H N N 362 TRP HD1 H N N 363 TRP HE1 H N N 364 TRP HE3 H N N 365 TRP HZ2 H N N 366 TRP HZ3 H N N 367 TRP HH2 H N N 368 TRP HXT H N N 369 TYR N N N N 370 TYR CA C N S 371 TYR C C N N 372 TYR O O N N 373 TYR CB C N N 374 TYR CG C Y N 375 TYR CD1 C Y N 376 TYR CD2 C Y N 377 TYR CE1 C Y N 378 TYR CE2 C Y N 379 TYR CZ C Y N 380 TYR OH O N N 381 TYR OXT O N N 382 TYR H H N N 383 TYR H2 H N N 384 TYR HA H N N 385 TYR HB2 H N N 386 TYR HB3 H N N 387 TYR HD1 H N N 388 TYR HD2 H N N 389 TYR HE1 H N N 390 TYR HE2 H N N 391 TYR HH H N N 392 TYR HXT H N N 393 VAL N N N N 394 VAL CA C N S 395 VAL C C N N 396 VAL O O N N 397 VAL CB C N N 398 VAL CG1 C N N 399 VAL CG2 C N N 400 VAL OXT O N N 401 VAL H H N N 402 VAL H2 H N N 403 VAL HA H N N 404 VAL HB H N N 405 VAL HG11 H N N 406 VAL HG12 H N N 407 VAL HG13 H N N 408 VAL HG21 H N N 409 VAL HG22 H N N 410 VAL HG23 H N N 411 VAL HXT H N N 412 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ACY C O doub N N 7 ACY C OXT sing N N 8 ACY C CH3 sing N N 9 ACY OXT HXT sing N N 10 ACY CH3 H1 sing N N 11 ACY CH3 H2 sing N N 12 ACY CH3 H3 sing N N 13 ALA N CA sing N N 14 ALA N H sing N N 15 ALA N H2 sing N N 16 ALA CA C sing N N 17 ALA CA CB sing N N 18 ALA CA HA sing N N 19 ALA C O doub N N 20 ALA C OXT sing N N 21 ALA CB HB1 sing N N 22 ALA CB HB2 sing N N 23 ALA CB HB3 sing N N 24 ALA OXT HXT sing N N 25 ARG N CA sing N N 26 ARG N H sing N N 27 ARG N H2 sing N N 28 ARG CA C sing N N 29 ARG CA CB sing N N 30 ARG CA HA sing N N 31 ARG C O doub N N 32 ARG C OXT sing N N 33 ARG CB CG sing N N 34 ARG CB HB2 sing N N 35 ARG CB HB3 sing N N 36 ARG CG CD sing N N 37 ARG CG HG2 sing N N 38 ARG CG HG3 sing N N 39 ARG CD NE sing N N 40 ARG CD HD2 sing N N 41 ARG CD HD3 sing N N 42 ARG NE CZ sing N N 43 ARG NE HE sing N N 44 ARG CZ NH1 sing N N 45 ARG CZ NH2 doub N N 46 ARG NH1 HH11 sing N N 47 ARG NH1 HH12 sing N N 48 ARG NH2 HH21 sing N N 49 ARG NH2 HH22 sing N N 50 ARG OXT HXT sing N N 51 ASN N CA sing N N 52 ASN N H sing N N 53 ASN N H2 sing N N 54 ASN CA C sing N N 55 ASN CA CB sing N N 56 ASN CA HA sing N N 57 ASN C O doub N N 58 ASN C OXT sing N N 59 ASN CB CG sing N N 60 ASN CB HB2 sing N N 61 ASN CB HB3 sing N N 62 ASN CG OD1 doub N N 63 ASN CG ND2 sing N N 64 ASN ND2 HD21 sing N N 65 ASN ND2 HD22 sing N N 66 ASN OXT HXT sing N N 67 ASP N CA sing N N 68 ASP N H sing N N 69 ASP N H2 sing N N 70 ASP CA C sing N N 71 ASP CA CB sing N N 72 ASP CA HA sing N N 73 ASP C O doub N N 74 ASP C OXT sing N N 75 ASP CB CG sing N N 76 ASP CB HB2 sing N N 77 ASP CB HB3 sing N N 78 ASP CG OD1 doub N N 79 ASP CG OD2 sing N N 80 ASP OD2 HD2 sing N N 81 ASP OXT HXT sing N N 82 CYS N CA sing N N 83 CYS N H sing N N 84 CYS N H2 sing N N 85 CYS CA C sing N N 86 CYS CA CB sing N N 87 CYS CA HA sing N N 88 CYS C O doub N N 89 CYS C OXT sing N N 90 CYS CB SG sing N N 91 CYS CB HB2 sing N N 92 CYS CB HB3 sing N N 93 CYS SG HG sing N N 94 CYS OXT HXT sing N N 95 DTY N CA sing N N 96 DTY N H sing N N 97 DTY N H2 sing N N 98 DTY CA C sing N N 99 DTY CA CB sing N N 100 DTY CA HA sing N N 101 DTY C O doub N N 102 DTY C OXT sing N N 103 DTY CB CG sing N N 104 DTY CB HB2 sing N N 105 DTY CB HB3 sing N N 106 DTY CG CD1 doub Y N 107 DTY CG CD2 sing Y N 108 DTY CD1 CE1 sing Y N 109 DTY CD1 HD1 sing N N 110 DTY CD2 CE2 doub Y N 111 DTY CD2 HD2 sing N N 112 DTY CE1 CZ doub Y N 113 DTY CE1 HE1 sing N N 114 DTY CE2 CZ sing Y N 115 DTY CE2 HE2 sing N N 116 DTY CZ OH sing N N 117 DTY OH HH sing N N 118 DTY OXT HXT sing N N 119 GLN N CA sing N N 120 GLN N H sing N N 121 GLN N H2 sing N N 122 GLN CA C sing N N 123 GLN CA CB sing N N 124 GLN CA HA sing N N 125 GLN C O doub N N 126 GLN C OXT sing N N 127 GLN CB CG sing N N 128 GLN CB HB2 sing N N 129 GLN CB HB3 sing N N 130 GLN CG CD sing N N 131 GLN CG HG2 sing N N 132 GLN CG HG3 sing N N 133 GLN CD OE1 doub N N 134 GLN CD NE2 sing N N 135 GLN NE2 HE21 sing N N 136 GLN NE2 HE22 sing N N 137 GLN OXT HXT sing N N 138 GLU N CA sing N N 139 GLU N H sing N N 140 GLU N H2 sing N N 141 GLU CA C sing N N 142 GLU CA CB sing N N 143 GLU CA HA sing N N 144 GLU C O doub N N 145 GLU C OXT sing N N 146 GLU CB CG sing N N 147 GLU CB HB2 sing N N 148 GLU CB HB3 sing N N 149 GLU CG CD sing N N 150 GLU CG HG2 sing N N 151 GLU CG HG3 sing N N 152 GLU CD OE1 doub N N 153 GLU CD OE2 sing N N 154 GLU OE2 HE2 sing N N 155 GLU OXT HXT sing N N 156 GLY N CA sing N N 157 GLY N H sing N N 158 GLY N H2 sing N N 159 GLY CA C sing N N 160 GLY CA HA2 sing N N 161 GLY CA HA3 sing N N 162 GLY C O doub N N 163 GLY C OXT sing N N 164 GLY OXT HXT sing N N 165 HIS N CA sing N N 166 HIS N H sing N N 167 HIS N H2 sing N N 168 HIS CA C sing N N 169 HIS CA CB sing N N 170 HIS CA HA sing N N 171 HIS C O doub N N 172 HIS C OXT sing N N 173 HIS CB CG sing N N 174 HIS CB HB2 sing N N 175 HIS CB HB3 sing N N 176 HIS CG ND1 sing Y N 177 HIS CG CD2 doub Y N 178 HIS ND1 CE1 doub Y N 179 HIS ND1 HD1 sing N N 180 HIS CD2 NE2 sing Y N 181 HIS CD2 HD2 sing N N 182 HIS CE1 NE2 sing Y N 183 HIS CE1 HE1 sing N N 184 HIS NE2 HE2 sing N N 185 HIS OXT HXT sing N N 186 HOH O H1 sing N N 187 HOH O H2 sing N N 188 ILE N CA sing N N 189 ILE N H sing N N 190 ILE N H2 sing N N 191 ILE CA C sing N N 192 ILE CA CB sing N N 193 ILE CA HA sing N N 194 ILE C O doub N N 195 ILE C OXT sing N N 196 ILE CB CG1 sing N N 197 ILE CB CG2 sing N N 198 ILE CB HB sing N N 199 ILE CG1 CD1 sing N N 200 ILE CG1 HG12 sing N N 201 ILE CG1 HG13 sing N N 202 ILE CG2 HG21 sing N N 203 ILE CG2 HG22 sing N N 204 ILE CG2 HG23 sing N N 205 ILE CD1 HD11 sing N N 206 ILE CD1 HD12 sing N N 207 ILE CD1 HD13 sing N N 208 ILE OXT HXT sing N N 209 LEU N CA sing N N 210 LEU N H sing N N 211 LEU N H2 sing N N 212 LEU CA C sing N N 213 LEU CA CB sing N N 214 LEU CA HA sing N N 215 LEU C O doub N N 216 LEU C OXT sing N N 217 LEU CB CG sing N N 218 LEU CB HB2 sing N N 219 LEU CB HB3 sing N N 220 LEU CG CD1 sing N N 221 LEU CG CD2 sing N N 222 LEU CG HG sing N N 223 LEU CD1 HD11 sing N N 224 LEU CD1 HD12 sing N N 225 LEU CD1 HD13 sing N N 226 LEU CD2 HD21 sing N N 227 LEU CD2 HD22 sing N N 228 LEU CD2 HD23 sing N N 229 LEU OXT HXT sing N N 230 LYS N CA sing N N 231 LYS N H sing N N 232 LYS N H2 sing N N 233 LYS CA C sing N N 234 LYS CA CB sing N N 235 LYS CA HA sing N N 236 LYS C O doub N N 237 LYS C OXT sing N N 238 LYS CB CG sing N N 239 LYS CB HB2 sing N N 240 LYS CB HB3 sing N N 241 LYS CG CD sing N N 242 LYS CG HG2 sing N N 243 LYS CG HG3 sing N N 244 LYS CD CE sing N N 245 LYS CD HD2 sing N N 246 LYS CD HD3 sing N N 247 LYS CE NZ sing N N 248 LYS CE HE2 sing N N 249 LYS CE HE3 sing N N 250 LYS NZ HZ1 sing N N 251 LYS NZ HZ2 sing N N 252 LYS NZ HZ3 sing N N 253 LYS OXT HXT sing N N 254 NH2 N HN1 sing N N 255 NH2 N HN2 sing N N 256 PHE N CA sing N N 257 PHE N H sing N N 258 PHE N H2 sing N N 259 PHE CA C sing N N 260 PHE CA CB sing N N 261 PHE CA HA sing N N 262 PHE C O doub N N 263 PHE C OXT sing N N 264 PHE CB CG sing N N 265 PHE CB HB2 sing N N 266 PHE CB HB3 sing N N 267 PHE CG CD1 doub Y N 268 PHE CG CD2 sing Y N 269 PHE CD1 CE1 sing Y N 270 PHE CD1 HD1 sing N N 271 PHE CD2 CE2 doub Y N 272 PHE CD2 HD2 sing N N 273 PHE CE1 CZ doub Y N 274 PHE CE1 HE1 sing N N 275 PHE CE2 CZ sing Y N 276 PHE CE2 HE2 sing N N 277 PHE CZ HZ sing N N 278 PHE OXT HXT sing N N 279 PRO N CA sing N N 280 PRO N CD sing N N 281 PRO N H sing N N 282 PRO CA C sing N N 283 PRO CA CB sing N N 284 PRO CA HA sing N N 285 PRO C O doub N N 286 PRO C OXT sing N N 287 PRO CB CG sing N N 288 PRO CB HB2 sing N N 289 PRO CB HB3 sing N N 290 PRO CG CD sing N N 291 PRO CG HG2 sing N N 292 PRO CG HG3 sing N N 293 PRO CD HD2 sing N N 294 PRO CD HD3 sing N N 295 PRO OXT HXT sing N N 296 SER N CA sing N N 297 SER N H sing N N 298 SER N H2 sing N N 299 SER CA C sing N N 300 SER CA CB sing N N 301 SER CA HA sing N N 302 SER C O doub N N 303 SER C OXT sing N N 304 SER CB OG sing N N 305 SER CB HB2 sing N N 306 SER CB HB3 sing N N 307 SER OG HG sing N N 308 SER OXT HXT sing N N 309 THR N CA sing N N 310 THR N H sing N N 311 THR N H2 sing N N 312 THR CA C sing N N 313 THR CA CB sing N N 314 THR CA HA sing N N 315 THR C O doub N N 316 THR C OXT sing N N 317 THR CB OG1 sing N N 318 THR CB CG2 sing N N 319 THR CB HB sing N N 320 THR OG1 HG1 sing N N 321 THR CG2 HG21 sing N N 322 THR CG2 HG22 sing N N 323 THR CG2 HG23 sing N N 324 THR OXT HXT sing N N 325 TRP N CA sing N N 326 TRP N H sing N N 327 TRP N H2 sing N N 328 TRP CA C sing N N 329 TRP CA CB sing N N 330 TRP CA HA sing N N 331 TRP C O doub N N 332 TRP C OXT sing N N 333 TRP CB CG sing N N 334 TRP CB HB2 sing N N 335 TRP CB HB3 sing N N 336 TRP CG CD1 doub Y N 337 TRP CG CD2 sing Y N 338 TRP CD1 NE1 sing Y N 339 TRP CD1 HD1 sing N N 340 TRP CD2 CE2 doub Y N 341 TRP CD2 CE3 sing Y N 342 TRP NE1 CE2 sing Y N 343 TRP NE1 HE1 sing N N 344 TRP CE2 CZ2 sing Y N 345 TRP CE3 CZ3 doub Y N 346 TRP CE3 HE3 sing N N 347 TRP CZ2 CH2 doub Y N 348 TRP CZ2 HZ2 sing N N 349 TRP CZ3 CH2 sing Y N 350 TRP CZ3 HZ3 sing N N 351 TRP CH2 HH2 sing N N 352 TRP OXT HXT sing N N 353 TYR N CA sing N N 354 TYR N H sing N N 355 TYR N H2 sing N N 356 TYR CA C sing N N 357 TYR CA CB sing N N 358 TYR CA HA sing N N 359 TYR C O doub N N 360 TYR C OXT sing N N 361 TYR CB CG sing N N 362 TYR CB HB2 sing N N 363 TYR CB HB3 sing N N 364 TYR CG CD1 doub Y N 365 TYR CG CD2 sing Y N 366 TYR CD1 CE1 sing Y N 367 TYR CD1 HD1 sing N N 368 TYR CD2 CE2 doub Y N 369 TYR CD2 HD2 sing N N 370 TYR CE1 CZ doub Y N 371 TYR CE1 HE1 sing N N 372 TYR CE2 CZ sing Y N 373 TYR CE2 HE2 sing N N 374 TYR CZ OH sing N N 375 TYR OH HH sing N N 376 TYR OXT HXT sing N N 377 VAL N CA sing N N 378 VAL N H sing N N 379 VAL N H2 sing N N 380 VAL CA C sing N N 381 VAL CA CB sing N N 382 VAL CA HA sing N N 383 VAL C O doub N N 384 VAL C OXT sing N N 385 VAL CB CG1 sing N N 386 VAL CB CG2 sing N N 387 VAL CB HB sing N N 388 VAL CG1 HG11 sing N N 389 VAL CG1 HG12 sing N N 390 VAL CG1 HG13 sing N N 391 VAL CG2 HG21 sing N N 392 VAL CG2 HG22 sing N N 393 VAL CG2 HG23 sing N N 394 VAL OXT HXT sing N N 395 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan 18H04032 1 'Japan Agency for Medical Research and Development (AMED)' Japan 18cm0106308h003 2 'Japan Agency for Medical Research and Development (AMED)' Japan 19cm0106308h004 3 'Japan Agency for Medical Research and Development (AMED)' Japan 'JP19am0101072 (support number 1143)' 4 'Japan Agency for Medical Research and Development (AMED)' Japan JP18am0101072 5 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ACETIC ACID' ACY 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2YZ1 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #