HEADER HYDROLASE 07-MAR-20 6M4L TITLE X-RAY CRYSTAL STRUCTURE OF THE E249Q MUTANT OF ALPHA-AMYLASE I FROM TITLE 2 EISENIA FETIDA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-AMYLASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EISENIA FETIDA; SOURCE 3 ORGANISM_COMMON: RED WIGGLER WORM; SOURCE 4 ORGANISM_TAXID: 6396; SOURCE 5 GENE: ALPHA-AMYLASE; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922 KEYWDS TIM BARREL, GH FAMILY 13, CARBOHYDRASE, COLD-ACTIVE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.HIRANO,K.TSUKAMOTO,S.ARIKI,Y.NAKA,M.UEDA,T.TAMADA REVDAT 3 16-OCT-24 6M4L 1 REMARK REVDAT 2 29-NOV-23 6M4L 1 REMARK REVDAT 1 16-SEP-20 6M4L 0 JRNL AUTH Y.HIRANO,K.TSUKAMOTO,S.ARIKI,Y.NAKA,M.UEDA,T.TAMADA JRNL TITL X-RAY CRYSTALLOGRAPHIC STRUCTURAL STUDIES OF ALPHA-AMYLASE I JRNL TITL 2 FROM EISENIA FETIDA. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 76 834 2020 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 32876059 JRNL DOI 10.1107/S2059798320010165 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.96 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.335 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 87523 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.974 REMARK 3 FREE R VALUE TEST SET COUNT : 4353 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.9500 - 4.9703 1.00 2980 146 0.1631 0.1849 REMARK 3 2 4.9703 - 3.9460 1.00 2861 143 0.1224 0.1328 REMARK 3 3 3.9460 - 3.4475 1.00 2833 136 0.1297 0.1359 REMARK 3 4 3.4475 - 3.1324 1.00 2776 167 0.1647 0.1779 REMARK 3 5 3.1324 - 2.9079 1.00 2803 161 0.1685 0.2032 REMARK 3 6 2.9079 - 2.7365 1.00 2783 149 0.1766 0.2021 REMARK 3 7 2.7365 - 2.5995 1.00 2753 159 0.1721 0.2028 REMARK 3 8 2.5995 - 2.4863 1.00 2793 128 0.1692 0.2049 REMARK 3 9 2.4863 - 2.3906 1.00 2800 126 0.1643 0.1605 REMARK 3 10 2.3906 - 2.3082 1.00 2794 131 0.1742 0.2059 REMARK 3 11 2.3082 - 2.2360 1.00 2784 140 0.1643 0.2063 REMARK 3 12 2.2360 - 2.1721 1.00 2767 152 0.1723 0.1920 REMARK 3 13 2.1721 - 2.1149 1.00 2764 113 0.1748 0.2027 REMARK 3 14 2.1149 - 2.0633 1.00 2779 139 0.1799 0.1987 REMARK 3 15 2.0633 - 2.0164 1.00 2754 146 0.1802 0.2126 REMARK 3 16 2.0164 - 1.9735 1.00 2736 129 0.1851 0.2018 REMARK 3 17 1.9735 - 1.9340 1.00 2762 165 0.1860 0.2085 REMARK 3 18 1.9340 - 1.8975 1.00 2734 156 0.1895 0.2167 REMARK 3 19 1.8975 - 1.8636 1.00 2760 124 0.1928 0.2479 REMARK 3 20 1.8636 - 1.8320 1.00 2716 159 0.2053 0.2351 REMARK 3 21 1.8320 - 1.8025 1.00 2787 167 0.2050 0.2406 REMARK 3 22 1.8025 - 1.7747 1.00 2704 160 0.2089 0.2546 REMARK 3 23 1.7747 - 1.7486 1.00 2771 131 0.2129 0.2606 REMARK 3 24 1.7486 - 1.7240 1.00 2770 133 0.2152 0.2147 REMARK 3 25 1.7240 - 1.7007 1.00 2704 150 0.2148 0.2212 REMARK 3 26 1.7007 - 1.6786 1.00 2795 145 0.2050 0.2192 REMARK 3 27 1.6786 - 1.6576 1.00 2715 150 0.2114 0.2344 REMARK 3 28 1.6576 - 1.6377 1.00 2718 165 0.2286 0.2543 REMARK 3 29 1.6377 - 1.6186 1.00 2737 158 0.2205 0.2708 REMARK 3 30 1.6186 - 1.6000 0.99 2737 125 0.2349 0.2435 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.135 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.163 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.86 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4617 REMARK 3 ANGLE : 0.837 6321 REMARK 3 CHIRALITY : 0.054 611 REMARK 3 PLANARITY : 0.006 869 REMARK 3 DIHEDRAL : 11.072 2645 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6M4L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1300016073. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 87577 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 49.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 7.80 REMARK 200 R MERGE FOR SHELL (I) : 0.52800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6M4K REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.3 M LITHIUM SULFATE, 3% (V/V) PEG REMARK 280 400, 0.1 M MAGNESIUM SULFATE, 0.1 M SODIUM ACETATE, PH 5.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.30467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.65233 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 40.65233 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 81.30467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 833 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 14 REMARK 465 ALA A 15 REMARK 465 GLU A 16 REMARK 465 GLU A 513 REMARK 465 GLN A 514 REMARK 465 LYS A 515 REMARK 465 LEU A 516 REMARK 465 ILE A 517 REMARK 465 SER A 518 REMARK 465 GLU A 519 REMARK 465 GLU A 520 REMARK 465 ASP A 521 REMARK 465 LEU A 522 REMARK 465 ASN A 523 REMARK 465 SER A 524 REMARK 465 ALA A 525 REMARK 465 VAL A 526 REMARK 465 ASP A 527 REMARK 465 HIS A 528 REMARK 465 HIS A 529 REMARK 465 HIS A 530 REMARK 465 HIS A 531 REMARK 465 HIS A 532 REMARK 465 HIS A 533 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 17 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU A 512 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 30 -45.58 -158.16 REMARK 500 ASP A 30 -44.66 -158.76 REMARK 500 MET A 120 -117.51 -108.06 REMARK 500 VAL A 144 -60.62 -92.05 REMARK 500 HIS A 165 -39.80 -133.21 REMARK 500 THR A 328 -56.64 -134.33 REMARK 500 GLU A 334 62.27 -113.33 REMARK 500 TYR A 350 109.68 -165.40 REMARK 500 PHE A 427 -98.38 -131.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 118 OD1 REMARK 620 2 ARG A 174 O 154.1 REMARK 620 3 ARG A 174 O 154.1 7.0 REMARK 620 4 ASP A 183 OD1 80.9 118.8 113.2 REMARK 620 5 ASP A 183 OD2 127.7 77.8 75.9 53.2 REMARK 620 6 HIS A 217 O 75.1 79.0 80.4 138.3 156.2 REMARK 620 7 HOH A 727 O 117.2 59.6 66.6 140.0 91.1 81.7 REMARK 620 8 HOH A 790 O 71.6 124.8 130.0 81.9 77.8 120.6 72.2 REMARK 620 9 HOH A 922 O 97.0 77.6 70.9 67.6 88.0 81.9 136.3 148.9 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TRS A 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 610 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 611 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 612 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 613 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 614 DBREF1 6M4L A 18 510 UNP A0A173N065_EISFE DBREF2 6M4L A A0A173N065 18 510 SEQADV 6M4L GLU A 14 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L ALA A 15 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L GLU A 16 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L PHE A 17 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L GLN A 249 UNP A0A173N06 GLU 249 ENGINEERED MUTATION SEQADV 6M4L PHE A 511 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L LEU A 512 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L GLU A 513 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L GLN A 514 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L LYS A 515 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L LEU A 516 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L ILE A 517 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L SER A 518 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L GLU A 519 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L GLU A 520 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L ASP A 521 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L LEU A 522 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L ASN A 523 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L SER A 524 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L ALA A 525 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L VAL A 526 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L ASP A 527 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L HIS A 528 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L HIS A 529 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L HIS A 530 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L HIS A 531 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L HIS A 532 UNP A0A173N06 EXPRESSION TAG SEQADV 6M4L HIS A 533 UNP A0A173N06 EXPRESSION TAG SEQRES 1 A 520 GLU ALA GLU PHE GLN TYR PHE GLY SER TYR TYR CYS GLN SEQRES 2 A 520 PRO GLY ARG ASP VAL ILE VAL HIS LEU PHE GLU TRP LYS SEQRES 3 A 520 TRP THR ASP ILE GLU ARG GLU CYS GLN TRP LEU ALA ASP SEQRES 4 A 520 HIS ASN TYR CYS GLY VAL GLN VAL SER PRO PRO ASN GLU SEQRES 5 A 520 HIS ARG ILE VAL THR ASP PRO PRO TYR PRO TRP TRP GLN SEQRES 6 A 520 ARG TYR GLN PRO VAL SER TYR THR MET ASN SER ARG SER SEQRES 7 A 520 GLY SER GLU THR GLN PHE ARG ASN MET VAL THR THR CYS SEQRES 8 A 520 ASN ASN LEU GLY VAL TYR ILE TYR VAL ASP GLY VAL LEU SEQRES 9 A 520 ASN HIS MET THR GLY GLY GLY SER GLY THR GLY SER ASP SEQRES 10 A 520 GLY ASN SER PHE ASP GLY ASP SER LEU GLN TYR PRO GLY SEQRES 11 A 520 VAL PRO TYR GLY PRO ASN ASP PHE HIS GLY SER ASP ASP SEQRES 12 A 520 CYS SER THR SER ASP GLY GLU ILE HIS ASP TYR ASN ASN SEQRES 13 A 520 PRO THR GLU VAL ARG ASN CYS ARG LEU SER GLY LEU ARG SEQRES 14 A 520 ASP LEU ASP GLY SER ALA ASN TYR VAL ARG ASP VAL GLU SEQRES 15 A 520 ALA GLU PHE ALA ASN ARG LEU ILE GLY TRP GLY VAL ALA SEQRES 16 A 520 GLY PHE ARG LEU ASP ALA CYS LYS HIS MET TRP PRO GLY SEQRES 17 A 520 ASP LEU GLU ALA ILE LEU GLY ARG LEU ASN GLN LEU ASN SEQRES 18 A 520 THR GLN TRP PHE PRO ALA GLY ARG ASN ALA TYR ILE TYR SEQRES 19 A 520 GLN GLN VAL ILE ASP LEU GLY GLY GLU ALA VAL LYS ALA SEQRES 20 A 520 THR GLU TYR THR TYR LEU GLY ARG VAL THR GLU PHE LYS SEQRES 21 A 520 HIS GLY GLN ASN LEU GLY ASN VAL VAL ARG LYS ASN ASN SEQRES 22 A 520 GLY GLN ARG LEU ALA ASN LEU VAL ASN PHE GLY GLU GLY SEQRES 23 A 520 TRP GLY GLN LEU SER GLY PHE ASP ALA LEU VAL PHE ILE SEQRES 24 A 520 ASP ASN HIS ASP ASN GLN ARG GLY HIS GLY ALA GLY GLY SEQRES 25 A 520 PHE GLY THR ILE LEU THR PHE PHE GLU ALA ASN MET TYR SEQRES 26 A 520 LYS ILE ALA THR ALA PHE GLU LEU ALA TRP ASP TYR GLY SEQRES 27 A 520 HIS VAL ARG LEU MET SER SER TYR ASN TRP PRO ARG ASN SEQRES 28 A 520 ILE VAL ASN GLY VAL ASP THR ASN ASP TRP VAL GLY PRO SEQRES 29 A 520 PRO THR ASN GLY GLY GLY ASP THR LYS ASP VAL GLU CYS SEQRES 30 A 520 PHE ASN GLY GLU TRP ILE CYS GLU HIS ARG TRP ARG GLU SEQRES 31 A 520 MET TYR ASN MET VAL ARG PHE HIS ASN VAL ALA ILE GLY SEQRES 32 A 520 ASN PRO VAL SER ASN TRP TRP ASP ASN GLY PHE GLN ALA SEQRES 33 A 520 ILE ALA PHE GLY ARG GLY ASN ARG GLY PHE ILE PHE ILE SEQRES 34 A 520 ASN ASN GLU ASP PHE ALA ILE THR GLN THR LEU GLN THR SEQRES 35 A 520 GLY LEU PRO GLY GLY GLU TYR CYS ASP VAL ILE SER CYS SEQRES 36 A 520 ASP ASN ASN ARG PRO PRO CYS GLY ASN SER GLY GLY ALA SEQRES 37 A 520 CYS ARG ALA THR VAL ILE VAL ASN GLY ASP GLY THR ALA SEQRES 38 A 520 THR PHE ASP VAL PRO ASN GLY GLU ASN PRO MET ILE ALA SEQRES 39 A 520 ILE HIS VAL PHE LEU GLU GLN LYS LEU ILE SER GLU GLU SEQRES 40 A 520 ASP LEU ASN SER ALA VAL ASP HIS HIS HIS HIS HIS HIS HET CA A 601 1 HET CL A 602 1 HET SO4 A 603 10 HET SO4 A 604 10 HET SO4 A 605 5 HET ACT A 606 4 HET ACT A 607 4 HET TRS A 608 8 HET PG4 A 609 13 HET EDO A 610 4 HET EDO A 611 4 HET EDO A 612 4 HET PGE A 613 10 HET PG4 A 614 13 HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION HETNAM ACT ACETATE ION HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM EDO 1,2-ETHANEDIOL HETNAM PGE TRIETHYLENE GLYCOL HETSYN TRS TRIS BUFFER HETSYN EDO ETHYLENE GLYCOL FORMUL 2 CA CA 2+ FORMUL 3 CL CL 1- FORMUL 4 SO4 3(O4 S 2-) FORMUL 7 ACT 2(C2 H3 O2 1-) FORMUL 9 TRS C4 H12 N O3 1+ FORMUL 10 PG4 2(C8 H18 O5) FORMUL 11 EDO 3(C2 H6 O2) FORMUL 14 PGE C6 H14 O4 FORMUL 16 HOH *515(H2 O) HELIX 1 AA1 LYS A 39 HIS A 53 1 15 HELIX 2 AA2 PRO A 75 GLN A 81 5 7 HELIX 3 AA3 SER A 93 LEU A 107 1 15 HELIX 4 AA4 GLY A 147 PHE A 151 5 5 HELIX 5 AA5 ASN A 169 CYS A 176 1 8 HELIX 6 AA6 ALA A 188 GLY A 206 1 19 HELIX 7 AA7 ALA A 214 MET A 218 5 5 HELIX 8 AA8 TRP A 219 GLY A 228 1 10 HELIX 9 AA9 LYS A 259 TYR A 263 5 5 HELIX 10 AB1 GLU A 271 LYS A 284 1 14 HELIX 11 AB2 ASN A 285 GLN A 288 5 4 HELIX 12 AB3 ARG A 289 PHE A 296 5 8 HELIX 13 AB4 GLY A 297 GLY A 301 5 5 HELIX 14 AB5 SER A 304 PHE A 306 5 3 HELIX 15 AB6 ASP A 316 GLY A 320 5 5 HELIX 16 AB7 THR A 331 PHE A 333 5 3 HELIX 17 AB8 GLU A 334 TRP A 348 1 15 HELIX 18 AB9 CYS A 397 ARG A 400 5 4 HELIX 19 AC1 TRP A 401 ALA A 414 1 14 SHEET 1 AA1 9 ILE A 32 LEU A 35 0 SHEET 2 AA1 9 GLY A 57 VAL A 60 1 O GLN A 59 N VAL A 33 SHEET 3 AA1 9 TYR A 110 GLY A 115 1 O TYR A 112 N VAL A 58 SHEET 4 AA1 9 GLY A 209 LEU A 212 1 O ARG A 211 N GLY A 115 SHEET 5 AA1 9 TYR A 245 GLN A 248 1 O TYR A 247 N LEU A 212 SHEET 6 AA1 9 ARG A 268 THR A 270 1 O THR A 270 N GLN A 248 SHEET 7 AA1 9 ALA A 308 VAL A 310 1 O LEU A 309 N VAL A 269 SHEET 8 AA1 9 HIS A 352 SER A 357 1 O ARG A 354 N VAL A 310 SHEET 9 AA1 9 ILE A 32 LEU A 35 1 N ILE A 32 O LEU A 355 SHEET 1 AA2 2 SER A 125 THR A 127 0 SHEET 2 AA2 2 SER A 133 ASP A 135 -1 O PHE A 134 N GLY A 126 SHEET 1 AA3 2 ILE A 365 VAL A 366 0 SHEET 2 AA3 2 VAL A 369 ASP A 370 -1 O VAL A 369 N VAL A 366 SHEET 1 AA4 4 VAL A 419 ASP A 424 0 SHEET 2 AA4 4 ALA A 429 ARG A 434 -1 O GLY A 433 N SER A 420 SHEET 3 AA4 4 GLY A 438 ASN A 443 -1 O ILE A 442 N ILE A 430 SHEET 4 AA4 4 MET A 505 HIS A 509 -1 O ILE A 506 N PHE A 441 SHEET 1 AA5 2 ILE A 449 GLN A 454 0 SHEET 2 AA5 2 THR A 493 VAL A 498 -1 O PHE A 496 N GLN A 451 SHEET 1 AA6 2 GLY A 460 TYR A 462 0 SHEET 2 AA6 2 VAL A 486 VAL A 488 -1 O VAL A 486 N TYR A 462 SSBOND 1 CYS A 25 CYS A 56 1555 1555 2.03 SSBOND 2 CYS A 47 CYS A 104 1555 1555 2.03 SSBOND 3 CYS A 157 CYS A 176 1555 1555 2.04 SSBOND 4 CYS A 390 CYS A 397 1555 1555 2.05 SSBOND 5 CYS A 463 CYS A 475 1555 1555 2.03 SSBOND 6 CYS A 468 CYS A 482 1555 1555 2.05 LINK OD1 ASN A 118 CA CA A 601 1555 1555 2.42 LINK O AARG A 174 CA CA A 601 1555 1555 2.50 LINK O BARG A 174 CA CA A 601 1555 1555 2.35 LINK OD1 ASP A 183 CA CA A 601 1555 1555 2.49 LINK OD2 ASP A 183 CA CA A 601 1555 1555 2.44 LINK O HIS A 217 CA CA A 601 1555 1555 2.38 LINK CA CA A 601 O HOH A 727 1555 1555 2.54 LINK CA CA A 601 O HOH A 790 1555 1555 2.52 LINK CA CA A 601 O HOH A 922 1555 1555 2.58 CISPEP 1 ASP A 71 PRO A 72 0 -0.15 CISPEP 2 VAL A 144 PRO A 145 0 -1.73 CISPEP 3 PRO A 473 PRO A 474 0 -0.65 SITE 1 AC1 7 ASN A 118 ARG A 174 ASP A 183 HIS A 217 SITE 2 AC1 7 HOH A 727 HOH A 790 HOH A 922 SITE 1 AC2 3 ARG A 211 ASN A 314 ARG A 354 SITE 1 AC3 7 GLU A 334 ALA A 335 ASN A 336 MET A 337 SITE 2 AC3 7 HOH A 867 HOH A 950 HOH A 979 SITE 1 AC4 3 GLY A 123 ARG A 182 HOH A 707 SITE 1 AC5 3 ARG A 192 HOH A 728 HOH A 792 SITE 1 AC6 6 TYR A 80 HIS A 119 ASP A 213 PGE A 613 SITE 2 AC6 6 HOH A 716 HOH A1057 SITE 1 AC7 3 SER A 420 ASN A 421 HOH A 983 SITE 1 AC8 4 LYS A 39 THR A 41 GLN A 96 HOH A 890 SITE 1 AC9 5 ASP A 71 PRO A 72 TRP A 374 HOH A 726 SITE 2 AC9 5 HOH A 841 SITE 1 AD1 3 THR A 95 ARG A 289 HOH A 945 SITE 1 AD2 2 PHE A 333 ASN A 360 SITE 1 AD3 4 GLY A 254 GLY A 255 LYS A 259 HOH A 900 SITE 1 AD4 2 SER A 179 ACT A 606 SITE 1 AD5 5 ASN A 380 LYS A 386 ASP A 387 HOH A 725 SITE 2 AD5 5 HOH A 753 CRYST1 96.897 96.897 121.957 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010320 0.005958 0.000000 0.00000 SCALE2 0.000000 0.011917 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008200 0.00000