HEADER ANTITOXIN 16-MAR-20 6M6W TITLE CRYSTAL STRUCTURE THE TOXIN-ANTITOXIN MNTA-HPET MUTANT-Y104A COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOXIN-ANTITOXIN SYSTEM ANTIDOTE MNT FAMILY; COMPND 3 CHAIN: A, F; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: SF FILE CONTAINS FRIEDEL PAIRS.; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TOXIN-ANTITOXIN SYSTEM TOXIN HEPN FAMILY; COMPND 8 CHAIN: B, C, D, G, H, I; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES; COMPND 11 OTHER_DETAILS: SF FILE CONTAINS FRIEDEL PAIRS. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA ONEIDENSIS MR-1; SOURCE 3 ORGANISM_TAXID: 211586; SOURCE 4 STRAIN: MR-1; SOURCE 5 GENE: SO_3165; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SHEWANELLA ONEIDENSIS MR-1; SOURCE 10 ORGANISM_TAXID: 211586; SOURCE 11 STRAIN: MR-1; SOURCE 12 GENE: SO_3166; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CRYSTAL STRUCTURE OF A UNIQUE TOXIN-ANTITOXIN SYSTEM, ANTITOXIN EXPDTA X-RAY DIFFRACTION AUTHOR S.Y.OUYANG,X.K.ZHEN REVDAT 5 29-NOV-23 6M6W 1 REMARK REVDAT 4 18-NOV-20 6M6W 1 JRNL REVDAT 3 28-OCT-20 6M6W 1 TITLE REVDAT 2 21-OCT-20 6M6W 1 JRNL REVDAT 1 30-SEP-20 6M6W 0 JRNL AUTH J.YAO,X.ZHEN,K.TANG,T.LIU,X.XU,Z.CHEN,Y.GUO,X.LIU,T.K.WOOD, JRNL AUTH 2 S.OUYANG,X.WANG JRNL TITL NOVEL POLYADENYLYLATION-DEPENDENT NEUTRALIZATION MECHANISM JRNL TITL 2 OF THE HEPN/MNT TOXIN/ANTITOXIN SYSTEM. JRNL REF NUCLEIC ACIDS RES. V. 48 11054 2020 JRNL REFN ESSN 1362-4962 JRNL PMID 33045733 JRNL DOI 10.1093/NAR/GKAA855 REMARK 2 REMARK 2 RESOLUTION. 2.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 82968 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.710 REMARK 3 FREE R VALUE TEST SET COUNT : 3910 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.1900 - 7.9086 0.97 2770 138 0.1335 0.1335 REMARK 3 2 7.9086 - 6.2857 1.00 2855 135 0.1943 0.2535 REMARK 3 3 6.2857 - 5.4935 0.99 2818 124 0.2245 0.2291 REMARK 3 4 5.4935 - 4.9924 0.99 2857 133 0.2041 0.2806 REMARK 3 5 4.9924 - 4.6351 1.00 2878 144 0.1829 0.1829 REMARK 3 6 4.6351 - 4.3622 0.99 2800 146 0.1757 0.1917 REMARK 3 7 4.3622 - 4.1440 0.99 2811 145 0.1819 0.2152 REMARK 3 8 4.1440 - 3.9638 0.99 2844 140 0.2077 0.2415 REMARK 3 9 3.9638 - 3.8113 0.99 2813 137 0.2181 0.2532 REMARK 3 10 3.8113 - 3.6799 0.99 2809 138 0.2153 0.2552 REMARK 3 11 3.6799 - 3.5649 0.99 2819 134 0.2386 0.2952 REMARK 3 12 3.5649 - 3.4631 0.99 2841 166 0.2522 0.3001 REMARK 3 13 3.4631 - 3.3720 0.99 2805 105 0.2683 0.2844 REMARK 3 14 3.3720 - 3.2898 0.99 2880 154 0.2700 0.3264 REMARK 3 15 3.2898 - 3.2150 0.99 2799 160 0.2669 0.2762 REMARK 3 16 3.2150 - 3.1466 0.99 2817 138 0.2836 0.3380 REMARK 3 17 3.1466 - 3.0837 0.99 2831 134 0.2889 0.3263 REMARK 3 18 3.0837 - 3.0255 0.99 2795 148 0.2898 0.3219 REMARK 3 19 3.0255 - 2.9715 0.99 2873 130 0.2960 0.3082 REMARK 3 20 2.9715 - 2.9212 0.99 2872 147 0.2973 0.3528 REMARK 3 21 2.9212 - 2.8741 0.99 2773 128 0.2930 0.2979 REMARK 3 22 2.8741 - 2.8299 0.99 2839 143 0.2812 0.3559 REMARK 3 23 2.8299 - 2.7882 0.99 2805 135 0.2908 0.2993 REMARK 3 24 2.7882 - 2.7490 0.99 2822 162 0.2812 0.3412 REMARK 3 25 2.7490 - 2.7118 0.98 2748 149 0.3064 0.3523 REMARK 3 26 2.7118 - 2.6766 0.98 2807 127 0.3222 0.3693 REMARK 3 27 2.6766 - 2.6432 0.99 2844 135 0.3154 0.4131 REMARK 3 28 2.6432 - 2.6113 0.99 2833 135 0.3429 0.3722 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 73.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 92.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 8233 REMARK 3 ANGLE : 1.105 11120 REMARK 3 CHIRALITY : 0.060 1328 REMARK 3 PLANARITY : 0.005 1453 REMARK 3 DIHEDRAL : 14.908 5082 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 3.1189 6.4344 161.2684 REMARK 3 T TENSOR REMARK 3 T11: 0.4479 T22: 0.5063 REMARK 3 T33: 0.5914 T12: -0.0073 REMARK 3 T13: -0.0390 T23: 0.0123 REMARK 3 L TENSOR REMARK 3 L11: 0.4109 L22: 0.6806 REMARK 3 L33: 1.5939 L12: 0.0887 REMARK 3 L13: -0.2674 L23: -0.3326 REMARK 3 S TENSOR REMARK 3 S11: -0.0432 S12: 0.0016 S13: -0.0351 REMARK 3 S21: -0.1216 S22: 0.0579 S23: 0.0539 REMARK 3 S31: 0.1637 S32: -0.1119 S33: -0.0150 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN I AND (RESSEQ 3:16 OR RESSEQ 19:27 REMARK 3 OR RESSEQ 29 OR RESSEQ 32 OR RESSEQ 34:43 REMARK 3 OR RESSEQ 45:58 OR RESSEQ 60 OR RESSEQ 62: REMARK 3 69 OR RESSEQ 71:83 OR RESSEQ 85:91 OR REMARK 3 RESSEQ 93:97 OR RESSEQ 100 OR RESSEQ 109 REMARK 3 OR RESSEQ 111:120 OR RESSEQ 122:130 OR REMARK 3 RESSEQ 132)) REMARK 3 SELECTION : (CHAIN B AND (RESSEQ 3:16 OR RESSEQ 19:27 REMARK 3 OR RESSEQ 29 OR RESSEQ 32 OR RESSEQ 34:43 REMARK 3 OR RESSEQ 45:58 OR RESSEQ 60 OR RESSEQ 62: REMARK 3 69 OR RESSEQ 71:83 OR RESSEQ 85:91 OR REMARK 3 RESSEQ 93:97 OR RESSEQ 100 OR RESSEQ 109 REMARK 3 OR RESSEQ 111:120 OR RESSEQ 122:130 OR REMARK 3 RESSEQ 132)) REMARK 3 ATOM PAIRS NUMBER : 2250 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN I AND (RESSEQ 3:16 OR RESSEQ 19:27 REMARK 3 OR RESSEQ 29 OR RESSEQ 32 OR RESSEQ 34:43 REMARK 3 OR RESSEQ 45:58 OR RESSEQ 60 OR RESSEQ 62: REMARK 3 69 OR RESSEQ 71:83 OR RESSEQ 85:91 OR REMARK 3 RESSEQ 93:97 OR RESSEQ 100 OR RESSEQ 109 REMARK 3 OR RESSEQ 111:120 OR RESSEQ 122:130 OR REMARK 3 RESSEQ 132)) REMARK 3 SELECTION : (CHAIN C AND (RESSEQ 3:16 OR RESSEQ 19:27 REMARK 3 OR RESSEQ 29 OR RESSEQ 32 OR RESSEQ 34:43 REMARK 3 OR RESSEQ 45:58 OR RESSEQ 60 OR RESSEQ 62: REMARK 3 69 OR RESSEQ 71:83 OR RESSEQ 85:91 OR REMARK 3 RESSEQ 93:97 OR RESSEQ 100 OR RESSEQ 109 REMARK 3 OR RESSEQ 111:120 OR RESSEQ 122:130 OR REMARK 3 RESSEQ 132)) REMARK 3 ATOM PAIRS NUMBER : 2250 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: (CHAIN I AND (RESSEQ 3:16 OR RESSEQ 19:27 REMARK 3 OR RESSEQ 29 OR RESSEQ 32 OR RESSEQ 34:43 REMARK 3 OR RESSEQ 45:58 OR RESSEQ 60 OR RESSEQ 62: REMARK 3 69 OR RESSEQ 71:83 OR RESSEQ 85:91 OR REMARK 3 RESSEQ 93:97 OR RESSEQ 100 OR RESSEQ 109 REMARK 3 OR RESSEQ 111:120 OR RESSEQ 122:130 OR REMARK 3 RESSEQ 132)) REMARK 3 SELECTION : (CHAIN D AND (RESSEQ 3:16 OR RESSEQ 19:27 REMARK 3 OR RESSEQ 29 OR RESSEQ 32 OR RESSEQ 34:43 REMARK 3 OR RESSEQ 45:58 OR RESSEQ 60 OR RESSEQ 62: REMARK 3 69 OR RESSEQ 71:83 OR RESSEQ 85:91 OR REMARK 3 RESSEQ 93:97 OR RESSEQ 100 OR RESSEQ 109 REMARK 3 OR RESSEQ 111:120 OR RESSEQ 122:130 OR REMARK 3 RESSEQ 132)) REMARK 3 ATOM PAIRS NUMBER : 2250 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 4 REMARK 3 REFERENCE SELECTION: (CHAIN I AND (RESSEQ 3:16 OR RESSEQ 19:27 REMARK 3 OR RESSEQ 29 OR RESSEQ 32 OR RESSEQ 34:43 REMARK 3 OR RESSEQ 45:58 OR RESSEQ 60 OR RESSEQ 62: REMARK 3 69 OR RESSEQ 71:83 OR RESSEQ 85:91 OR REMARK 3 RESSEQ 93:97 OR RESSEQ 100 OR RESSEQ 109 REMARK 3 OR RESSEQ 111:120 OR RESSEQ 122:130 OR REMARK 3 RESSEQ 132)) REMARK 3 SELECTION : (CHAIN H AND (RESSEQ 3:16 OR RESSEQ 19:27 REMARK 3 OR RESSEQ 29 OR RESSEQ 32 OR RESSEQ 34:43 REMARK 3 OR RESSEQ 45:58 OR RESSEQ 60 OR RESSEQ 62: REMARK 3 69 OR RESSEQ 71:83 OR RESSEQ 85:91 OR REMARK 3 RESSEQ 93:97 OR RESSEQ 100 OR RESSEQ 109 REMARK 3 OR RESSEQ 111:120 OR RESSEQ 122:130 OR REMARK 3 RESSEQ 132)) REMARK 3 ATOM PAIRS NUMBER : 2250 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESSEQ 4:18 OR RESSEQ 20:30 REMARK 3 OR RESSEQ 39:97 OR RESSEQ 99:125 OR REMARK 3 (RESID 126 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME CB OR NAME CG OR NAME SD OR REMARK 3 NAME CE )) OR (RESID 127 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME CB )))) REMARK 3 SELECTION : (CHAIN F AND (RESSEQ 4:18 OR RESSEQ 20:30 REMARK 3 OR RESSEQ 39:97 OR RESSEQ 99:125 OR REMARK 3 (RESID 126 AND (NAME O OR NAME N OR NAME REMARK 3 CA OR NAME C OR NAME CB OR NAME CG OR REMARK 3 NAME SD )) OR (RESID 127 AND (NAME O OR REMARK 3 NAME N OR NAME CA OR NAME C )))) REMARK 3 ATOM PAIRS NUMBER : 1045 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6M6W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1300015981. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-OCT-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7-10 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 286711 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.610 REMARK 200 RESOLUTION RANGE LOW (A) : 79.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: 5YEP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20%PEG4000, 0.1 M HEPES,PH 7.5, PH REMARK 280 8.2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.40950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, F, G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 GLN A 3 REMARK 465 GLN A 31 REMARK 465 GLY A 32 REMARK 465 THR A 33 REMARK 465 GLN A 34 REMARK 465 HIS A 35 REMARK 465 ARG A 36 REMARK 465 ASN A 37 REMARK 465 ASN A 128 REMARK 465 THR A 129 REMARK 465 ALA A 130 REMARK 465 ALA A 131 REMARK 465 LYS A 132 REMARK 465 ALA A 133 REMARK 465 HIS A 134 REMARK 465 ARG A 135 REMARK 465 GLY A 136 REMARK 465 GLU A 137 REMARK 465 SER A 138 REMARK 465 LEU A 139 REMARK 465 MET B 1 REMARK 465 MET C 1 REMARK 465 MET D 1 REMARK 465 HIS D 102 REMARK 465 ASP D 103 REMARK 465 ALA D 104 REMARK 465 MET F 1 REMARK 465 GLN F 2 REMARK 465 ARG F 36 REMARK 465 ASN F 37 REMARK 465 ASN F 128 REMARK 465 THR F 129 REMARK 465 ALA F 130 REMARK 465 ALA F 131 REMARK 465 LYS F 132 REMARK 465 ALA F 133 REMARK 465 HIS F 134 REMARK 465 ARG F 135 REMARK 465 GLY F 136 REMARK 465 GLU F 137 REMARK 465 SER F 138 REMARK 465 LEU F 139 REMARK 465 MET G 1 REMARK 465 ALA G 132 REMARK 465 GLU G 133 REMARK 465 MET H 1 REMARK 465 ASN H 2 REMARK 465 ALA H 104 REMARK 465 GLN H 105 REMARK 465 GLU H 106 REMARK 465 MET I 1 REMARK 465 HIS I 102 REMARK 465 ASP I 103 REMARK 465 ALA I 104 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS D 30 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU G 121 OE1 GLN G 125 1.88 REMARK 500 O LEU G 109 CG1 VAL G 112 2.10 REMARK 500 NH1 ARG G 70 O LYS G 91 2.11 REMARK 500 OE1 GLU A 57 NZ LYS D 92 2.15 REMARK 500 ND2 ASN A 52 O LEU D 107 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 103 59.65 -158.06 REMARK 500 ASP D 25 34.64 -85.28 REMARK 500 SER D 27 -113.17 -32.05 REMARK 500 PHE D 29 -7.07 -58.43 REMARK 500 TYR G 23 68.99 -111.47 REMARK 500 LEU G 109 -2.85 60.87 REMARK 500 GLN G 117 -76.67 -84.45 REMARK 500 SER I 27 -83.97 48.53 REMARK 500 REMARK 500 REMARK: NULL DBREF 6M6W A 1 139 UNP Q8ECH7 Q8ECH7_SHEON 1 139 DBREF 6M6W B 1 133 UNP Q8ECH6 Q8ECH6_SHEON 1 133 DBREF 6M6W C 1 133 UNP Q8ECH6 Q8ECH6_SHEON 1 133 DBREF 6M6W D 1 133 UNP Q8ECH6 Q8ECH6_SHEON 1 133 DBREF 6M6W F 1 139 UNP Q8ECH7 Q8ECH7_SHEON 1 139 DBREF 6M6W G 1 133 UNP Q8ECH6 Q8ECH6_SHEON 1 133 DBREF 6M6W H 1 133 UNP Q8ECH6 Q8ECH6_SHEON 1 133 DBREF 6M6W I 1 133 UNP Q8ECH6 Q8ECH6_SHEON 1 133 SEQADV 6M6W ALA B 104 UNP Q8ECH6 TYR 104 ENGINEERED MUTATION SEQADV 6M6W ALA C 104 UNP Q8ECH6 TYR 104 ENGINEERED MUTATION SEQADV 6M6W ALA D 104 UNP Q8ECH6 TYR 104 ENGINEERED MUTATION SEQADV 6M6W ALA G 104 UNP Q8ECH6 TYR 104 ENGINEERED MUTATION SEQADV 6M6W ALA H 104 UNP Q8ECH6 TYR 104 ENGINEERED MUTATION SEQADV 6M6W ALA I 104 UNP Q8ECH6 TYR 104 ENGINEERED MUTATION SEQRES 1 A 139 MET GLN GLN LEU ASN GLU ASN LYS ILE ILE LYS LEU LEU SEQRES 2 A 139 ARG ASP ASN ILE PRO LYS LEU GLN LEU ILE TYR LEU PHE SEQRES 3 A 139 GLY SER TYR SER GLN GLY THR GLN HIS ARG ASN SER ASP SEQRES 4 A 139 ILE ASP ILE ALA VAL LEU ALA ALA ASP THR LEU ASP ASN SEQRES 5 A 139 ILE ALA ARG TRP GLU LEU ALA GLN LYS LEU ALA SER ALA SEQRES 6 A 139 LEU ASP SER ASP VAL ASP LEU VAL ASP LEU ARG SER ALA SEQRES 7 A 139 SER THR VAL LEU CYS GLN GLN VAL VAL THR GLN GLY LYS SEQRES 8 A 139 GLN LEU TRP GLY THR GLN GLN ASP ASP GLU LEU PHE ALA SEQRES 9 A 139 VAL LYS THR ILE SER MET TYR GLN HIS LEU GLN ALA GLU SEQRES 10 A 139 ARG GLN ALA ILE ILE ASP ASP VAL MET ALA ASN THR ALA SEQRES 11 A 139 ALA LYS ALA HIS ARG GLY GLU SER LEU SEQRES 1 B 133 MET ASN ASP ILE ILE ILE ASN LYS ILE ALA THR ILE LYS SEQRES 2 B 133 ARG CYS ILE LYS ARG ILE GLN GLN VAL TYR GLY ASP GLY SEQRES 3 B 133 SER GLN PHE LYS GLN ASP PHE THR LEU GLN ASP SER VAL SEQRES 4 B 133 ILE LEU ASN LEU GLN ARG CYS CYS GLU ALA CYS ILE ASP SEQRES 5 B 133 ILE ALA ASN HIS ILE ASN ARG GLN GLN GLN LEU GLY ILE SEQRES 6 B 133 PRO GLN SER SER ARG ASP SER PHE THR LEU LEU ALA GLN SEQRES 7 B 133 ASN ASN LEU ILE THR GLN PRO LEU SER ASP ASN LEU LYS SEQRES 8 B 133 LYS MET VAL GLY LEU ARG ASN ILE ALA VAL HIS ASP ALA SEQRES 9 B 133 GLN GLU LEU ASN LEU ASP ILE VAL VAL HIS VAL VAL GLN SEQRES 10 B 133 HIS HIS LEU GLU ASP PHE GLU GLN PHE ILE ASP VAL ILE SEQRES 11 B 133 LYS ALA GLU SEQRES 1 C 133 MET ASN ASP ILE ILE ILE ASN LYS ILE ALA THR ILE LYS SEQRES 2 C 133 ARG CYS ILE LYS ARG ILE GLN GLN VAL TYR GLY ASP GLY SEQRES 3 C 133 SER GLN PHE LYS GLN ASP PHE THR LEU GLN ASP SER VAL SEQRES 4 C 133 ILE LEU ASN LEU GLN ARG CYS CYS GLU ALA CYS ILE ASP SEQRES 5 C 133 ILE ALA ASN HIS ILE ASN ARG GLN GLN GLN LEU GLY ILE SEQRES 6 C 133 PRO GLN SER SER ARG ASP SER PHE THR LEU LEU ALA GLN SEQRES 7 C 133 ASN ASN LEU ILE THR GLN PRO LEU SER ASP ASN LEU LYS SEQRES 8 C 133 LYS MET VAL GLY LEU ARG ASN ILE ALA VAL HIS ASP ALA SEQRES 9 C 133 GLN GLU LEU ASN LEU ASP ILE VAL VAL HIS VAL VAL GLN SEQRES 10 C 133 HIS HIS LEU GLU ASP PHE GLU GLN PHE ILE ASP VAL ILE SEQRES 11 C 133 LYS ALA GLU SEQRES 1 D 133 MET ASN ASP ILE ILE ILE ASN LYS ILE ALA THR ILE LYS SEQRES 2 D 133 ARG CYS ILE LYS ARG ILE GLN GLN VAL TYR GLY ASP GLY SEQRES 3 D 133 SER GLN PHE LYS GLN ASP PHE THR LEU GLN ASP SER VAL SEQRES 4 D 133 ILE LEU ASN LEU GLN ARG CYS CYS GLU ALA CYS ILE ASP SEQRES 5 D 133 ILE ALA ASN HIS ILE ASN ARG GLN GLN GLN LEU GLY ILE SEQRES 6 D 133 PRO GLN SER SER ARG ASP SER PHE THR LEU LEU ALA GLN SEQRES 7 D 133 ASN ASN LEU ILE THR GLN PRO LEU SER ASP ASN LEU LYS SEQRES 8 D 133 LYS MET VAL GLY LEU ARG ASN ILE ALA VAL HIS ASP ALA SEQRES 9 D 133 GLN GLU LEU ASN LEU ASP ILE VAL VAL HIS VAL VAL GLN SEQRES 10 D 133 HIS HIS LEU GLU ASP PHE GLU GLN PHE ILE ASP VAL ILE SEQRES 11 D 133 LYS ALA GLU SEQRES 1 F 139 MET GLN GLN LEU ASN GLU ASN LYS ILE ILE LYS LEU LEU SEQRES 2 F 139 ARG ASP ASN ILE PRO LYS LEU GLN LEU ILE TYR LEU PHE SEQRES 3 F 139 GLY SER TYR SER GLN GLY THR GLN HIS ARG ASN SER ASP SEQRES 4 F 139 ILE ASP ILE ALA VAL LEU ALA ALA ASP THR LEU ASP ASN SEQRES 5 F 139 ILE ALA ARG TRP GLU LEU ALA GLN LYS LEU ALA SER ALA SEQRES 6 F 139 LEU ASP SER ASP VAL ASP LEU VAL ASP LEU ARG SER ALA SEQRES 7 F 139 SER THR VAL LEU CYS GLN GLN VAL VAL THR GLN GLY LYS SEQRES 8 F 139 GLN LEU TRP GLY THR GLN GLN ASP ASP GLU LEU PHE ALA SEQRES 9 F 139 VAL LYS THR ILE SER MET TYR GLN HIS LEU GLN ALA GLU SEQRES 10 F 139 ARG GLN ALA ILE ILE ASP ASP VAL MET ALA ASN THR ALA SEQRES 11 F 139 ALA LYS ALA HIS ARG GLY GLU SER LEU SEQRES 1 G 133 MET ASN ASP ILE ILE ILE ASN LYS ILE ALA THR ILE LYS SEQRES 2 G 133 ARG CYS ILE LYS ARG ILE GLN GLN VAL TYR GLY ASP GLY SEQRES 3 G 133 SER GLN PHE LYS GLN ASP PHE THR LEU GLN ASP SER VAL SEQRES 4 G 133 ILE LEU ASN LEU GLN ARG CYS CYS GLU ALA CYS ILE ASP SEQRES 5 G 133 ILE ALA ASN HIS ILE ASN ARG GLN GLN GLN LEU GLY ILE SEQRES 6 G 133 PRO GLN SER SER ARG ASP SER PHE THR LEU LEU ALA GLN SEQRES 7 G 133 ASN ASN LEU ILE THR GLN PRO LEU SER ASP ASN LEU LYS SEQRES 8 G 133 LYS MET VAL GLY LEU ARG ASN ILE ALA VAL HIS ASP ALA SEQRES 9 G 133 GLN GLU LEU ASN LEU ASP ILE VAL VAL HIS VAL VAL GLN SEQRES 10 G 133 HIS HIS LEU GLU ASP PHE GLU GLN PHE ILE ASP VAL ILE SEQRES 11 G 133 LYS ALA GLU SEQRES 1 H 133 MET ASN ASP ILE ILE ILE ASN LYS ILE ALA THR ILE LYS SEQRES 2 H 133 ARG CYS ILE LYS ARG ILE GLN GLN VAL TYR GLY ASP GLY SEQRES 3 H 133 SER GLN PHE LYS GLN ASP PHE THR LEU GLN ASP SER VAL SEQRES 4 H 133 ILE LEU ASN LEU GLN ARG CYS CYS GLU ALA CYS ILE ASP SEQRES 5 H 133 ILE ALA ASN HIS ILE ASN ARG GLN GLN GLN LEU GLY ILE SEQRES 6 H 133 PRO GLN SER SER ARG ASP SER PHE THR LEU LEU ALA GLN SEQRES 7 H 133 ASN ASN LEU ILE THR GLN PRO LEU SER ASP ASN LEU LYS SEQRES 8 H 133 LYS MET VAL GLY LEU ARG ASN ILE ALA VAL HIS ASP ALA SEQRES 9 H 133 GLN GLU LEU ASN LEU ASP ILE VAL VAL HIS VAL VAL GLN SEQRES 10 H 133 HIS HIS LEU GLU ASP PHE GLU GLN PHE ILE ASP VAL ILE SEQRES 11 H 133 LYS ALA GLU SEQRES 1 I 133 MET ASN ASP ILE ILE ILE ASN LYS ILE ALA THR ILE LYS SEQRES 2 I 133 ARG CYS ILE LYS ARG ILE GLN GLN VAL TYR GLY ASP GLY SEQRES 3 I 133 SER GLN PHE LYS GLN ASP PHE THR LEU GLN ASP SER VAL SEQRES 4 I 133 ILE LEU ASN LEU GLN ARG CYS CYS GLU ALA CYS ILE ASP SEQRES 5 I 133 ILE ALA ASN HIS ILE ASN ARG GLN GLN GLN LEU GLY ILE SEQRES 6 I 133 PRO GLN SER SER ARG ASP SER PHE THR LEU LEU ALA GLN SEQRES 7 I 133 ASN ASN LEU ILE THR GLN PRO LEU SER ASP ASN LEU LYS SEQRES 8 I 133 LYS MET VAL GLY LEU ARG ASN ILE ALA VAL HIS ASP ALA SEQRES 9 I 133 GLN GLU LEU ASN LEU ASP ILE VAL VAL HIS VAL VAL GLN SEQRES 10 I 133 HIS HIS LEU GLU ASP PHE GLU GLN PHE ILE ASP VAL ILE SEQRES 11 I 133 LYS ALA GLU HELIX 1 AA1 ASN A 5 ILE A 17 1 13 HELIX 2 AA2 ASP A 51 ASP A 67 1 17 HELIX 3 AA3 SER A 79 GLY A 90 1 12 HELIX 4 AA4 THR A 96 MET A 126 1 31 HELIX 5 AA5 ASP B 3 GLY B 24 1 22 HELIX 6 AA6 ASP B 32 GLN B 61 1 30 HELIX 7 AA7 SER B 68 ASN B 79 1 12 HELIX 8 AA8 THR B 83 ASP B 103 1 21 HELIX 9 AA9 ALA B 104 LEU B 107 5 4 HELIX 10 AB1 ASN B 108 HIS B 119 1 12 HELIX 11 AB2 HIS B 119 ALA B 132 1 14 HELIX 12 AB3 ASP C 3 GLY C 24 1 22 HELIX 13 AB4 GLN C 28 GLN C 31 5 4 HELIX 14 AB5 ASP C 32 GLN C 62 1 31 HELIX 15 AB6 ARG C 70 ASN C 79 1 10 HELIX 16 AB7 THR C 83 ASP C 103 1 21 HELIX 17 AB8 ASN C 108 HIS C 119 1 12 HELIX 18 AB9 HIS C 119 LYS C 131 1 13 HELIX 19 AC1 ASP D 3 GLY D 24 1 22 HELIX 20 AC2 ASP D 32 GLN D 61 1 30 HELIX 21 AC3 SER D 68 ASN D 79 1 12 HELIX 22 AC4 THR D 83 GLY D 95 1 13 HELIX 23 AC5 GLY D 95 ALA D 100 1 6 HELIX 24 AC6 ASN D 108 HIS D 119 1 12 HELIX 25 AC7 HIS D 119 LYS D 131 1 13 HELIX 26 AC8 ASN F 5 ASP F 15 1 11 HELIX 27 AC9 GLY F 27 GLY F 32 1 6 HELIX 28 AD1 ASP F 51 ASP F 67 1 17 HELIX 29 AD2 SER F 79 GLY F 90 1 12 HELIX 30 AD3 THR F 96 MET F 126 1 31 HELIX 31 AD4 ASP G 3 TYR G 23 1 21 HELIX 32 AD5 PHE G 33 GLN G 61 1 29 HELIX 33 AD6 SER G 68 ASN G 79 1 12 HELIX 34 AD7 THR G 83 ASP G 103 1 21 HELIX 35 AD8 ASP G 110 HIS G 119 1 10 HELIX 36 AD9 HIS G 119 LYS G 131 1 13 HELIX 37 AE1 ILE H 4 TYR H 23 1 20 HELIX 38 AE2 ASP H 32 GLN H 62 1 31 HELIX 39 AE3 SER H 68 ASN H 79 1 12 HELIX 40 AE4 THR H 83 ASP H 103 1 21 HELIX 41 AE5 ASN H 108 HIS H 119 1 12 HELIX 42 AE6 HIS H 119 GLU H 133 1 15 HELIX 43 AE7 ASP I 3 GLY I 24 1 22 HELIX 44 AE8 GLN I 28 GLN I 31 5 4 HELIX 45 AE9 ASP I 32 GLN I 61 1 30 HELIX 46 AF1 SER I 68 ASN I 79 1 12 HELIX 47 AF2 THR I 83 GLY I 95 1 13 HELIX 48 AF3 LEU I 96 VAL I 101 1 6 HELIX 49 AF4 GLU I 106 HIS I 119 1 14 HELIX 50 AF5 HIS I 119 ALA I 132 1 14 SHEET 1 AA1 4 VAL A 70 ASP A 74 0 SHEET 2 AA1 4 ILE A 40 ALA A 46 1 N ILE A 42 O VAL A 73 SHEET 3 AA1 4 LEU A 20 PHE A 26 -1 N TYR A 24 O ALA A 43 SHEET 4 AA1 4 LYS A 91 TRP A 94 -1 O LYS A 91 N LEU A 25 SHEET 1 AA2 4 VAL F 70 ASP F 74 0 SHEET 2 AA2 4 ILE F 40 ALA F 46 1 N ILE F 42 O VAL F 73 SHEET 3 AA2 4 LEU F 20 LEU F 25 -1 N GLN F 21 O LEU F 45 SHEET 4 AA2 4 LYS F 91 TRP F 94 -1 O LYS F 91 N LEU F 25 CRYST1 54.102 100.819 131.781 90.00 97.09 90.00 P 1 21 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018484 0.000000 0.002298 0.00000 SCALE2 0.000000 0.009919 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007647 0.00000