data_6M7V
#
_entry.id 6M7V
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.379
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 6M7V pdb_00006m7v 10.2210/pdb6m7v/pdb
WWPDB D_1000236325 ? ?
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 6M7V
_pdbx_database_status.recvd_initial_deposition_date 2018-08-21
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Weng, P.' 1 ?
'Gao, Y.' 2 ?
'Yang, W.' 3 ?
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country US
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev 'Proc. Natl. Acad. Sci. U.S.A.'
_citation.journal_id_ASTM PNASA6
_citation.journal_id_CSD 0040
_citation.journal_id_ISSN 1091-6490
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 115
_citation.language ?
_citation.page_first 10660
_citation.page_last 10665
_citation.title
;Bypassing a 8,5'-cyclo-2'-deoxyadenosine lesion by human DNA polymerase eta at atomic resolution.
;
_citation.year 2018
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1073/pnas.1812856115
_citation.pdbx_database_id_PubMed 30275308
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Weng, P.J.' 1 ?
primary 'Gao, Y.' 2 ?
primary 'Gregory, M.T.' 3 ?
primary 'Wang, P.' 4 ?
primary 'Wang, Y.' 5 ?
primary 'Yang, W.' 6 0000-0002-3591-2195
#
_cell.angle_alpha 90.00
_cell.angle_alpha_esd ?
_cell.angle_beta 90.00
_cell.angle_beta_esd ?
_cell.angle_gamma 90.00
_cell.angle_gamma_esd ?
_cell.entry_id 6M7V
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 63.075
_cell.length_a_esd ?
_cell.length_b 81.387
_cell.length_b_esd ?
_cell.length_c 145.006
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 4
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 6M7V
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 19
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 21 21 21'
_symmetry.pdbx_full_space_group_name_H-M ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man 'DNA polymerase eta' 48617.707 1
2.7.7.7 ? ? ?
2 polymer syn
;DNA (5'-D(P*GP*TP*GP*TP*GP*AP*GP*T)-3')
;
2497.651 1 ? ? ? ?
3 polymer syn
;DNA (5'-D(P*(02I)P*CP*TP*CP*AP*CP*AP*CP*T)-3')
;
2657.760 1 ? ? ? ?
4 non-polymer syn 'NICKEL (II) ION' 58.693 1 ? ? ?
?
5 non-polymer syn "2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine" 490.197 1 ? ? ?
?
6 non-polymer syn 'MANGANESE (II) ION' 54.938 2 ? ? ?
?
7 water nat water 18.015 17 ? ? ?
?
#
_entity_name_com.entity_id 1
_entity_name_com.name 'RAD30 homolog A,Xeroderma pigmentosum variant type protein'
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_target_identifier
1 'polypeptide(L)' no no
;GPHMATGQDRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWADDAKKLCPDLLL
AQVRESRGKANLTKYREASVEVMEIMSRFAVIERASIDEAYVDLTSAVQERLQKLQGQPISADLLPSTYIEGLPQGPTTA
EETVQKEGMRKQGLFQWLDSLQIDNLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTL
VSHGSVPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDPVKPRQLPK
TIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVATQLVVSIRVQGDKRLSSLRRCCALTRYDAHKMSH
DAFTVIKNCNTSGIQTEWSPPLTMLFLCATKFSAS
;
;GPHMATGQDRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWADDAKKLCPDLLL
AQVRESRGKANLTKYREASVEVMEIMSRFAVIERASIDEAYVDLTSAVQERLQKLQGQPISADLLPSTYIEGLPQGPTTA
EETVQKEGMRKQGLFQWLDSLQIDNLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTL
VSHGSVPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDPVKPRQLPK
TIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVATQLVVSIRVQGDKRLSSLRRCCALTRYDAHKMSH
DAFTVIKNCNTSGIQTEWSPPLTMLFLCATKFSAS
;
A ?
2 polydeoxyribonucleotide no no '(DG)(DT)(DG)(DT)(DG)(DA)(DG)(DT)' GTGTGAGT P ?
3 polydeoxyribonucleotide no yes '(02I)(DC)(DT)(DC)(DA)(DC)(DA)(DC)(DT)' XCTCACACT T ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLY n
1 2 PRO n
1 3 HIS n
1 4 MET n
1 5 ALA n
1 6 THR n
1 7 GLY n
1 8 GLN n
1 9 ASP n
1 10 ARG n
1 11 VAL n
1 12 VAL n
1 13 ALA n
1 14 LEU n
1 15 VAL n
1 16 ASP n
1 17 MET n
1 18 ASP n
1 19 CYS n
1 20 PHE n
1 21 PHE n
1 22 VAL n
1 23 GLN n
1 24 VAL n
1 25 GLU n
1 26 GLN n
1 27 ARG n
1 28 GLN n
1 29 ASN n
1 30 PRO n
1 31 HIS n
1 32 LEU n
1 33 ARG n
1 34 ASN n
1 35 LYS n
1 36 PRO n
1 37 CYS n
1 38 ALA n
1 39 VAL n
1 40 VAL n
1 41 GLN n
1 42 TYR n
1 43 LYS n
1 44 SER n
1 45 TRP n
1 46 LYS n
1 47 GLY n
1 48 GLY n
1 49 GLY n
1 50 ILE n
1 51 ILE n
1 52 ALA n
1 53 VAL n
1 54 SER n
1 55 TYR n
1 56 GLU n
1 57 ALA n
1 58 ARG n
1 59 ALA n
1 60 PHE n
1 61 GLY n
1 62 VAL n
1 63 THR n
1 64 ARG n
1 65 SER n
1 66 MET n
1 67 TRP n
1 68 ALA n
1 69 ASP n
1 70 ASP n
1 71 ALA n
1 72 LYS n
1 73 LYS n
1 74 LEU n
1 75 CYS n
1 76 PRO n
1 77 ASP n
1 78 LEU n
1 79 LEU n
1 80 LEU n
1 81 ALA n
1 82 GLN n
1 83 VAL n
1 84 ARG n
1 85 GLU n
1 86 SER n
1 87 ARG n
1 88 GLY n
1 89 LYS n
1 90 ALA n
1 91 ASN n
1 92 LEU n
1 93 THR n
1 94 LYS n
1 95 TYR n
1 96 ARG n
1 97 GLU n
1 98 ALA n
1 99 SER n
1 100 VAL n
1 101 GLU n
1 102 VAL n
1 103 MET n
1 104 GLU n
1 105 ILE n
1 106 MET n
1 107 SER n
1 108 ARG n
1 109 PHE n
1 110 ALA n
1 111 VAL n
1 112 ILE n
1 113 GLU n
1 114 ARG n
1 115 ALA n
1 116 SER n
1 117 ILE n
1 118 ASP n
1 119 GLU n
1 120 ALA n
1 121 TYR n
1 122 VAL n
1 123 ASP n
1 124 LEU n
1 125 THR n
1 126 SER n
1 127 ALA n
1 128 VAL n
1 129 GLN n
1 130 GLU n
1 131 ARG n
1 132 LEU n
1 133 GLN n
1 134 LYS n
1 135 LEU n
1 136 GLN n
1 137 GLY n
1 138 GLN n
1 139 PRO n
1 140 ILE n
1 141 SER n
1 142 ALA n
1 143 ASP n
1 144 LEU n
1 145 LEU n
1 146 PRO n
1 147 SER n
1 148 THR n
1 149 TYR n
1 150 ILE n
1 151 GLU n
1 152 GLY n
1 153 LEU n
1 154 PRO n
1 155 GLN n
1 156 GLY n
1 157 PRO n
1 158 THR n
1 159 THR n
1 160 ALA n
1 161 GLU n
1 162 GLU n
1 163 THR n
1 164 VAL n
1 165 GLN n
1 166 LYS n
1 167 GLU n
1 168 GLY n
1 169 MET n
1 170 ARG n
1 171 LYS n
1 172 GLN n
1 173 GLY n
1 174 LEU n
1 175 PHE n
1 176 GLN n
1 177 TRP n
1 178 LEU n
1 179 ASP n
1 180 SER n
1 181 LEU n
1 182 GLN n
1 183 ILE n
1 184 ASP n
1 185 ASN n
1 186 LEU n
1 187 THR n
1 188 SER n
1 189 PRO n
1 190 ASP n
1 191 LEU n
1 192 GLN n
1 193 LEU n
1 194 THR n
1 195 VAL n
1 196 GLY n
1 197 ALA n
1 198 VAL n
1 199 ILE n
1 200 VAL n
1 201 GLU n
1 202 GLU n
1 203 MET n
1 204 ARG n
1 205 ALA n
1 206 ALA n
1 207 ILE n
1 208 GLU n
1 209 ARG n
1 210 GLU n
1 211 THR n
1 212 GLY n
1 213 PHE n
1 214 GLN n
1 215 CYS n
1 216 SER n
1 217 ALA n
1 218 GLY n
1 219 ILE n
1 220 SER n
1 221 HIS n
1 222 ASN n
1 223 LYS n
1 224 VAL n
1 225 LEU n
1 226 ALA n
1 227 LYS n
1 228 LEU n
1 229 ALA n
1 230 CYS n
1 231 GLY n
1 232 LEU n
1 233 ASN n
1 234 LYS n
1 235 PRO n
1 236 ASN n
1 237 ARG n
1 238 GLN n
1 239 THR n
1 240 LEU n
1 241 VAL n
1 242 SER n
1 243 HIS n
1 244 GLY n
1 245 SER n
1 246 VAL n
1 247 PRO n
1 248 GLN n
1 249 LEU n
1 250 PHE n
1 251 SER n
1 252 GLN n
1 253 MET n
1 254 PRO n
1 255 ILE n
1 256 ARG n
1 257 LYS n
1 258 ILE n
1 259 ARG n
1 260 SER n
1 261 LEU n
1 262 GLY n
1 263 GLY n
1 264 LYS n
1 265 LEU n
1 266 GLY n
1 267 ALA n
1 268 SER n
1 269 VAL n
1 270 ILE n
1 271 GLU n
1 272 ILE n
1 273 LEU n
1 274 GLY n
1 275 ILE n
1 276 GLU n
1 277 TYR n
1 278 MET n
1 279 GLY n
1 280 GLU n
1 281 LEU n
1 282 THR n
1 283 GLN n
1 284 PHE n
1 285 THR n
1 286 GLU n
1 287 SER n
1 288 GLN n
1 289 LEU n
1 290 GLN n
1 291 SER n
1 292 HIS n
1 293 PHE n
1 294 GLY n
1 295 GLU n
1 296 LYS n
1 297 ASN n
1 298 GLY n
1 299 SER n
1 300 TRP n
1 301 LEU n
1 302 TYR n
1 303 ALA n
1 304 MET n
1 305 CYS n
1 306 ARG n
1 307 GLY n
1 308 ILE n
1 309 GLU n
1 310 HIS n
1 311 ASP n
1 312 PRO n
1 313 VAL n
1 314 LYS n
1 315 PRO n
1 316 ARG n
1 317 GLN n
1 318 LEU n
1 319 PRO n
1 320 LYS n
1 321 THR n
1 322 ILE n
1 323 GLY n
1 324 CYS n
1 325 SER n
1 326 LYS n
1 327 ASN n
1 328 PHE n
1 329 PRO n
1 330 GLY n
1 331 LYS n
1 332 THR n
1 333 ALA n
1 334 LEU n
1 335 ALA n
1 336 THR n
1 337 ARG n
1 338 GLU n
1 339 GLN n
1 340 VAL n
1 341 GLN n
1 342 TRP n
1 343 TRP n
1 344 LEU n
1 345 LEU n
1 346 GLN n
1 347 LEU n
1 348 ALA n
1 349 GLN n
1 350 GLU n
1 351 LEU n
1 352 GLU n
1 353 GLU n
1 354 ARG n
1 355 LEU n
1 356 THR n
1 357 LYS n
1 358 ASP n
1 359 ARG n
1 360 ASN n
1 361 ASP n
1 362 ASN n
1 363 ASP n
1 364 ARG n
1 365 VAL n
1 366 ALA n
1 367 THR n
1 368 GLN n
1 369 LEU n
1 370 VAL n
1 371 VAL n
1 372 SER n
1 373 ILE n
1 374 ARG n
1 375 VAL n
1 376 GLN n
1 377 GLY n
1 378 ASP n
1 379 LYS n
1 380 ARG n
1 381 LEU n
1 382 SER n
1 383 SER n
1 384 LEU n
1 385 ARG n
1 386 ARG n
1 387 CYS n
1 388 CYS n
1 389 ALA n
1 390 LEU n
1 391 THR n
1 392 ARG n
1 393 TYR n
1 394 ASP n
1 395 ALA n
1 396 HIS n
1 397 LYS n
1 398 MET n
1 399 SER n
1 400 HIS n
1 401 ASP n
1 402 ALA n
1 403 PHE n
1 404 THR n
1 405 VAL n
1 406 ILE n
1 407 LYS n
1 408 ASN n
1 409 CYS n
1 410 ASN n
1 411 THR n
1 412 SER n
1 413 GLY n
1 414 ILE n
1 415 GLN n
1 416 THR n
1 417 GLU n
1 418 TRP n
1 419 SER n
1 420 PRO n
1 421 PRO n
1 422 LEU n
1 423 THR n
1 424 MET n
1 425 LEU n
1 426 PHE n
1 427 LEU n
1 428 CYS n
1 429 ALA n
1 430 THR n
1 431 LYS n
1 432 PHE n
1 433 SER n
1 434 ALA n
1 435 SER n
2 1 DG n
2 2 DT n
2 3 DG n
2 4 DT n
2 5 DG n
2 6 DA n
2 7 DG n
2 8 DT n
3 1 02I n
3 2 DC n
3 3 DT n
3 4 DC n
3 5 DA n
3 6 DC n
3 7 DA n
3 8 DC n
3 9 DT n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type 'Biological sequence'
_entity_src_gen.pdbx_beg_seq_num 1
_entity_src_gen.pdbx_end_seq_num 435
_entity_src_gen.gene_src_common_name Human
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene 'POLH, RAD30, RAD30A, XPV'
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain ?
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type ?
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name ?
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
loop_
_pdbx_entity_src_syn.entity_id
_pdbx_entity_src_syn.pdbx_src_id
_pdbx_entity_src_syn.pdbx_alt_source_flag
_pdbx_entity_src_syn.pdbx_beg_seq_num
_pdbx_entity_src_syn.pdbx_end_seq_num
_pdbx_entity_src_syn.organism_scientific
_pdbx_entity_src_syn.organism_common_name
_pdbx_entity_src_syn.ncbi_taxonomy_id
_pdbx_entity_src_syn.details
2 1 sample 1 8 'Homo sapiens' Human 9606 ?
3 1 sample 1 9 'Homo sapiens' Human 9606 ?
#
loop_
_struct_ref.id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_db_isoform
_struct_ref.entity_id
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.pdbx_align_begin
1 UNP POLH_HUMAN Q9Y253 ? 1
;MATGQDRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWADDAKKLCPDLLLAQV
RESRGKANLTKYREASVEVMEIMSRFAVIERASIDEAYVDLTSAVQERLQKLQGQPISADLLPSTYIEGLPQGPTTAEET
VQKEGMRKQGLFQWLDSLQIDNLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSH
GSVPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDPVKPRQLPKTIG
CSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVATQLVVSIRVQGDKRLSSLRRCCALTRYDAHKMSHDAF
TVIKNCNTSGIQTEWSPPLTMLFLCATKFSAS
;
1
2 PDB 6M7V 6M7V ? 2 ? 1
3 PDB 6M7V 6M7V ? 3 ? 1
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 6M7V A 4 ? 435 ? Q9Y253 1 ? 432 ? 1 432
2 2 6M7V P 1 ? 8 ? 6M7V 2 ? 9 ? 2 9
3 3 6M7V T 1 ? 9 ? 6M7V 4 ? 12 ? 4 12
#
loop_
_struct_ref_seq_dif.align_id
_struct_ref_seq_dif.pdbx_pdb_id_code
_struct_ref_seq_dif.mon_id
_struct_ref_seq_dif.pdbx_pdb_strand_id
_struct_ref_seq_dif.seq_num
_struct_ref_seq_dif.pdbx_pdb_ins_code
_struct_ref_seq_dif.pdbx_seq_db_name
_struct_ref_seq_dif.pdbx_seq_db_accession_code
_struct_ref_seq_dif.db_mon_id
_struct_ref_seq_dif.pdbx_seq_db_seq_num
_struct_ref_seq_dif.details
_struct_ref_seq_dif.pdbx_auth_seq_num
_struct_ref_seq_dif.pdbx_ordinal
1 6M7V GLY A 1 ? UNP Q9Y253 ? ? 'expression tag' -2 1
1 6M7V PRO A 2 ? UNP Q9Y253 ? ? 'expression tag' -1 2
1 6M7V HIS A 3 ? UNP Q9Y253 ? ? 'expression tag' 0 3
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
02I 'DNA linking' .
'(6S,7S,8S,10R)-4-amino-8-hydroxy-7,8,9,10-tetrahydro-6H-7,10-epoxyazepino[1,2-e]purin-6-yl dihydrogen phosphate' ?
'C10 H12 N5 O6 P' 329.206
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
DZ4 non-polymer . "2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine" ?
'C10 H17 N6 O11 P3' 490.197
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938
NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 6M7V
_exptl.crystals_number 1
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 3.54
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 65.30
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH ?
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 295
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details
;16 % PEG 2000 MME
100 mM MES, pH 6.0
;
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
_diffrn.pdbx_serial_crystal_experiment ?
#
_diffrn_detector.details ?
_diffrn_detector.detector CCD
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'MARMOSAIC 225 mm CCD'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2014-10-04
_diffrn_detector.pdbx_frequency ?
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.0
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source SYNCHROTRON
_diffrn_source.target ?
_diffrn_source.type 'APS BEAMLINE 22-BM'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 1.0
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline 22-BM
_diffrn_source.pdbx_synchrotron_site APS
#
_reflns.B_iso_Wilson_estimate ?
_reflns.entry_id 6M7V
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 3.05
_reflns.d_resolution_low 40
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 10305
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 99.8
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 5.9
_reflns.pdbx_Rmerge_I_obs 0.059
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 11.1
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all ?
_reflns.pdbx_Rpim_I_all ?
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half ?
_reflns.pdbx_R_split ?
#
_reflns_shell.d_res_high 3.05
_reflns_shell.d_res_low 3.16
_reflns_shell.meanI_over_sigI_all ?
_reflns_shell.meanI_over_sigI_obs 2.4
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_possible ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_unique_obs 762
_reflns_shell.percent_possible_all ?
_reflns_shell.percent_possible_obs ?
_reflns_shell.Rmerge_F_all ?
_reflns_shell.Rmerge_F_obs ?
_reflns_shell.Rmerge_I_all ?
_reflns_shell.Rmerge_I_obs 1.042
_reflns_shell.meanI_over_sigI_gt ?
_reflns_shell.meanI_over_uI_all ?
_reflns_shell.meanI_over_uI_gt ?
_reflns_shell.number_measured_gt ?
_reflns_shell.number_unique_gt ?
_reflns_shell.percent_possible_gt ?
_reflns_shell.Rmerge_F_gt ?
_reflns_shell.Rmerge_I_gt ?
_reflns_shell.pdbx_redundancy ?
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_netI_over_sigmaI_all ?
_reflns_shell.pdbx_netI_over_sigmaI_obs ?
_reflns_shell.pdbx_Rrim_I_all ?
_reflns_shell.pdbx_Rpim_I_all ?
_reflns_shell.pdbx_rejects ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
_reflns_shell.pdbx_CC_half ?
_reflns_shell.pdbx_R_split ?
#
_refine.aniso_B[1][1] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[2][3] ?
_refine.aniso_B[3][3] ?
_refine.B_iso_max ?
_refine.B_iso_mean ?
_refine.B_iso_min ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.details ?
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 6M7V
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 3.062
_refine.ls_d_res_low 39.180
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 9898
_refine.ls_number_reflns_R_free 465
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 67.62
_refine.ls_percent_reflns_R_free 4.70
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.2382
_refine.ls_R_factor_R_free 0.2676
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.2366
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 1.36
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model 3SI8
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_solvent_vdw_probe_radii 1.11
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii 0.90
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error 26.86
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B ?
_refine.overall_SU_ML 0.41
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 3313
_refine_hist.pdbx_number_atoms_nucleic_acid 348
_refine_hist.pdbx_number_atoms_ligand 33
_refine_hist.number_atoms_solvent 17
_refine_hist.number_atoms_total 3711
_refine_hist.d_res_high 3.062
_refine_hist.d_res_low 39.180
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'X-RAY DIFFRACTION' ? 0.008 ? 3803 ? f_bond_d ? ?
'X-RAY DIFFRACTION' ? 1.326 ? 5216 ? f_angle_d ? ?
'X-RAY DIFFRACTION' ? 25.285 ? 1451 ? f_dihedral_angle_d ? ?
'X-RAY DIFFRACTION' ? 0.073 ? 585 ? f_chiral_restr ? ?
'X-RAY DIFFRACTION' ? 0.014 ? 607 ? f_plane_restr ? ?
#
loop_
_refine_ls_shell.pdbx_refine_id
_refine_ls_shell.d_res_high
_refine_ls_shell.d_res_low
_refine_ls_shell.number_reflns_all
_refine_ls_shell.number_reflns_obs
_refine_ls_shell.number_reflns_R_free
_refine_ls_shell.number_reflns_R_work
_refine_ls_shell.percent_reflns_obs
_refine_ls_shell.percent_reflns_R_free
_refine_ls_shell.R_factor_all
_refine_ls_shell.R_factor_obs
_refine_ls_shell.R_factor_R_free
_refine_ls_shell.R_factor_R_free_error
_refine_ls_shell.R_factor_R_work
_refine_ls_shell.redundancy_reflns_all
_refine_ls_shell.redundancy_reflns_obs
_refine_ls_shell.wR_factor_all
_refine_ls_shell.wR_factor_obs
_refine_ls_shell.wR_factor_R_free
_refine_ls_shell.wR_factor_R_work
_refine_ls_shell.pdbx_total_number_of_bins_used
_refine_ls_shell.pdbx_phase_error
_refine_ls_shell.pdbx_fsc_work
_refine_ls_shell.pdbx_fsc_free
'X-RAY DIFFRACTION' 3.0621 3.1149 . . 2 56 8.00 . . . 0.8534 . 0.4109 . . . . . . . . . .
'X-RAY DIFFRACTION' 3.1149 3.1715 . . 9 96 15.00 . . . 0.2888 . 0.3613 . . . . . . . . . .
'X-RAY DIFFRACTION' 3.1715 3.2325 . . 10 146 22.00 . . . 0.4554 . 0.3067 . . . . . . . . . .
'X-RAY DIFFRACTION' 3.2325 3.2984 . . 7 214 31.00 . . . 0.2893 . 0.3069 . . . . . . . . . .
'X-RAY DIFFRACTION' 3.2984 3.3701 . . 16 255 38.00 . . . 0.2869 . 0.2804 . . . . . . . . . .
'X-RAY DIFFRACTION' 3.3701 3.4485 . . 17 305 45.00 . . . 0.2959 . 0.2915 . . . . . . . . . .
'X-RAY DIFFRACTION' 3.4485 3.5347 . . 16 365 52.00 . . . 0.3375 . 0.2612 . . . . . . . . . .
'X-RAY DIFFRACTION' 3.5347 3.6302 . . 16 398 58.00 . . . 0.2399 . 0.2662 . . . . . . . . . .
'X-RAY DIFFRACTION' 3.6302 3.7369 . . 17 436 63.00 . . . 0.3289 . 0.2560 . . . . . . . . . .
'X-RAY DIFFRACTION' 3.7369 3.8574 . . 25 504 72.00 . . . 0.2856 . 0.2467 . . . . . . . . . .
'X-RAY DIFFRACTION' 3.8574 3.9952 . . 30 509 75.00 . . . 0.3280 . 0.2344 . . . . . . . . . .
'X-RAY DIFFRACTION' 3.9952 4.1550 . . 25 578 84.00 . . . 0.2958 . 0.2231 . . . . . . . . . .
'X-RAY DIFFRACTION' 4.1550 4.3438 . . 24 619 89.00 . . . 0.2675 . 0.2316 . . . . . . . . . .
'X-RAY DIFFRACTION' 4.3438 4.5725 . . 36 662 94.00 . . . 0.2919 . 0.2311 . . . . . . . . . .
'X-RAY DIFFRACTION' 4.5725 4.8585 . . 41 691 99.00 . . . 0.3266 . 0.2194 . . . . . . . . . .
'X-RAY DIFFRACTION' 4.8585 5.2328 . . 28 700 100.00 . . . 0.2632 . 0.2297 . . . . . . . . . .
'X-RAY DIFFRACTION' 5.2328 5.7580 . . 45 702 100.00 . . . 0.2349 . 0.2685 . . . . . . . . . .
'X-RAY DIFFRACTION' 5.7580 6.5877 . . 36 708 100.00 . . . 0.2688 . 0.2473 . . . . . . . . . .
'X-RAY DIFFRACTION' 6.5877 8.2869 . . 26 732 100.00 . . . 0.2207 . 0.2156 . . . . . . . . . .
'X-RAY DIFFRACTION' 8.2869 39.1831 . . 39 757 97.00 . . . 0.1974 . 0.2033 . . . . . . . . . .
#
_struct.entry_id 6M7V
_struct.title 'Human DNA polymerase eta extension complex with cdA at the -1 position'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 6M7V
_struct_keywords.text 'TRANSLESION SYNTHESIS, HUMAN DNA POLYMERSE ETA cdA, TRANSFERASE-DNA complex'
_struct_keywords.pdbx_keywords TRANSFERASE/DNA
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
E N N 5 ?
F N N 6 ?
G N N 6 ?
H N N 7 ?
I N N 7 ?
J N N 7 ?
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 AA1 CYS A 19 ? ASN A 29 ? CYS A 16 ASN A 26 1 ? 11
HELX_P HELX_P2 AA2 PRO A 30 ? ARG A 33 ? PRO A 27 ARG A 30 5 ? 4
HELX_P HELX_P3 AA3 SER A 54 ? ALA A 59 ? SER A 51 ALA A 56 1 ? 6
HELX_P HELX_P4 AA4 TRP A 67 ? LYS A 72 ? TRP A 64 LYS A 69 1 ? 6
HELX_P HELX_P5 AA5 LEU A 92 ? SER A 107 ? LEU A 89 SER A 104 1 ? 16
HELX_P HELX_P6 AA6 LEU A 124 ? GLN A 136 ? LEU A 121 GLN A 133 1 ? 13
HELX_P HELX_P7 AA7 SER A 141 ? LEU A 145 ? SER A 138 LEU A 142 5 ? 5
HELX_P HELX_P8 AA8 GLU A 167 ? LEU A 181 ? GLU A 164 LEU A 178 1 ? 15
HELX_P HELX_P9 AA9 SER A 188 ? GLY A 212 ? SER A 185 GLY A 209 1 ? 25
HELX_P HELX_P10 AB1 ASN A 222 ? GLY A 231 ? ASN A 219 GLY A 228 1 ? 10
HELX_P HELX_P11 AB2 SER A 242 ? GLY A 244 ? SER A 239 GLY A 241 5 ? 3
HELX_P HELX_P12 AB3 SER A 245 ? GLN A 252 ? SER A 242 GLN A 249 1 ? 8
HELX_P HELX_P13 AB4 PRO A 254 ? ILE A 258 ? PRO A 251 ILE A 255 5 ? 5
HELX_P HELX_P14 AB5 GLY A 263 ? GLY A 274 ? GLY A 260 GLY A 271 1 ? 12
HELX_P HELX_P15 AB6 TYR A 277 ? PHE A 284 ? TYR A 274 PHE A 281 5 ? 8
HELX_P HELX_P16 AB7 THR A 285 ? GLY A 294 ? THR A 282 GLY A 291 1 ? 10
HELX_P HELX_P17 AB8 GLY A 294 ? CYS A 305 ? GLY A 291 CYS A 302 1 ? 12
HELX_P HELX_P18 AB9 PRO A 329 ? ALA A 333 ? PRO A 326 ALA A 330 5 ? 5
HELX_P HELX_P19 AC1 ARG A 337 ? ASP A 363 ? ARG A 334 ASP A 360 1 ? 27
HELX_P HELX_P20 AC2 ASP A 394 ? ASN A 408 ? ASP A 391 ASN A 405 1 ? 15
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? C 02I 1 "O3'" ? ? ? 1_555 C DC 2 P ? ? T 02I 4 T DC 5 1_555 ? ? ? ? ? ? ? 1.604 ? ?
metalc1 metalc ? ? A ASP 16 OD1 ? ? ? 1_555 F MN . MN ? ? A ASP 13 A MN 503 1_555 ? ? ? ? ? ? ? 2.239 ? ?
metalc2 metalc ? ? A ASP 16 OD2 ? ? ? 1_555 G MN . MN ? ? A ASP 13 A MN 504 1_555 ? ? ? ? ? ? ? 1.875 ? ?
metalc3 metalc ? ? A MET 17 O ? ? ? 1_555 F MN . MN ? ? A MET 14 A MN 503 1_555 ? ? ? ? ? ? ? 2.178 ? ?
metalc4 metalc ? ? A ASP 118 OD1 ? ? ? 1_555 F MN . MN ? ? A ASP 115 A MN 503 1_555 ? ? ? ? ? ? ? 1.980 ? ?
metalc5 metalc ? ? A ASP 118 OD2 ? ? ? 1_555 G MN . MN ? ? A ASP 115 A MN 504 1_555 ? ? ? ? ? ? ? 2.078 ? ?
metalc6 metalc ? ? A GLU 119 OE2 ? ? ? 1_555 G MN . MN ? ? A GLU 116 A MN 504 1_555 ? ? ? ? ? ? ? 2.341 ? ?
metalc7 metalc ? ? A ASP 184 OD2 ? ? ? 1_555 D NI . NI ? ? A ASP 181 A NI 501 2_554 ? ? ? ? ? ? ? 2.105 ? ?
metalc8 metalc ? ? A HIS 292 NE2 ? ? ? 1_555 D NI . NI ? ? A HIS 289 A NI 501 3_555 ? ? ? ? ? ? ? 1.777 ? ?
metalc9 metalc ? ? A HIS 396 NE2 ? ? ? 1_555 D NI . NI ? ? A HIS 393 A NI 501 1_555 ? ? ? ? ? ? ? 2.005 ? ?
metalc10 metalc ? ? A HIS 400 NE2 ? ? ? 1_555 D NI . NI ? ? A HIS 397 A NI 501 1_555 ? ? ? ? ? ? ? 2.009 ? ?
metalc11 metalc ? ? E DZ4 . O1A ? ? ? 1_555 F MN . MN ? ? A DZ4 502 A MN 503 1_555 ? ? ? ? ? ? ? 2.073 ? ?
metalc12 metalc ? ? E DZ4 . O1B ? ? ? 1_555 F MN . MN ? ? A DZ4 502 A MN 503 1_555 ? ? ? ? ? ? ? 2.000 ? ?
metalc13 metalc ? ? E DZ4 . O1G ? ? ? 1_555 F MN . MN ? ? A DZ4 502 A MN 503 1_555 ? ? ? ? ? ? ? 2.578 ? ?
metalc14 metalc ? ? E DZ4 . O1A ? ? ? 1_555 G MN . MN ? ? A DZ4 502 A MN 504 1_555 ? ? ? ? ? ? ? 2.190 ? ?
metalc15 metalc ? ? G MN . MN ? ? ? 1_555 H HOH . O ? ? A MN 504 A HOH 606 1_555 ? ? ? ? ? ? ? 2.442 ? ?
metalc16 metalc ? ? G MN . MN ? ? ? 1_555 B DT 8 OP1 ? ? A MN 504 P DT 9 1_555 ? ? ? ? ? ? ? 2.026 ? ?
hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 C DC 8 N3 ? ? P DG 2 T DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 C DC 8 O2 ? ? P DG 2 T DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 C DC 8 N4 ? ? P DG 2 T DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? B DT 2 N3 ? ? ? 1_555 C DA 7 N1 ? ? P DT 3 T DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? B DT 2 O4 ? ? ? 1_555 C DA 7 N6 ? ? P DT 3 T DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 6 N3 ? ? P DG 4 T DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 6 O2 ? ? P DG 4 T DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 6 N4 ? ? P DG 4 T DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 5 N1 ? ? P DT 5 T DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 5 N6 ? ? P DT 5 T DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? B DG 5 N1 ? ? ? 1_555 C DC 4 N3 ? ? P DG 6 T DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? B DG 5 N2 ? ? ? 1_555 C DC 4 O2 ? ? P DG 6 T DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? B DG 5 O6 ? ? ? 1_555 C DC 4 N4 ? ? P DG 6 T DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? B DA 6 N1 ? ? ? 1_555 C DT 3 N3 ? ? P DA 7 T DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? B DA 6 N6 ? ? ? 1_555 C DT 3 O4 ? ? P DA 7 T DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? B DG 7 N1 ? ? ? 1_555 C DC 2 N3 ? ? P DG 8 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? B DG 7 N2 ? ? ? 1_555 C DC 2 O2 ? ? P DG 8 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? B DG 7 O6 ? ? ? 1_555 C DC 2 N4 ? ? P DG 8 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
metalc ? ?
hydrog ? ?
#
loop_
_struct_mon_prot_cis.pdbx_id
_struct_mon_prot_cis.label_comp_id
_struct_mon_prot_cis.label_seq_id
_struct_mon_prot_cis.label_asym_id
_struct_mon_prot_cis.label_alt_id
_struct_mon_prot_cis.pdbx_PDB_ins_code
_struct_mon_prot_cis.auth_comp_id
_struct_mon_prot_cis.auth_seq_id
_struct_mon_prot_cis.auth_asym_id
_struct_mon_prot_cis.pdbx_label_comp_id_2
_struct_mon_prot_cis.pdbx_label_seq_id_2
_struct_mon_prot_cis.pdbx_label_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_ins_code_2
_struct_mon_prot_cis.pdbx_auth_comp_id_2
_struct_mon_prot_cis.pdbx_auth_seq_id_2
_struct_mon_prot_cis.pdbx_auth_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_model_num
_struct_mon_prot_cis.pdbx_omega_angle
1 LEU 153 A . ? LEU 150 A PRO 154 A ? PRO 151 A 1 -2.04
2 SER 419 A . ? SER 416 A PRO 420 A ? PRO 417 A 1 -2.33
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
AA1 ? 6 ?
AA2 ? 3 ?
AA3 ? 2 ?
AA4 ? 3 ?
AA5 ? 4 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
AA1 1 2 ? anti-parallel
AA1 2 3 ? anti-parallel
AA1 3 4 ? anti-parallel
AA1 4 5 ? parallel
AA1 5 6 ? parallel
AA2 1 2 ? anti-parallel
AA2 2 3 ? parallel
AA3 1 2 ? anti-parallel
AA4 1 2 ? anti-parallel
AA4 2 3 ? anti-parallel
AA5 1 2 ? anti-parallel
AA5 2 3 ? anti-parallel
AA5 3 4 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
AA1 1 ILE A 112 ? SER A 116 ? ILE A 109 SER A 113
AA1 2 GLU A 119 ? ASP A 123 ? GLU A 116 ASP A 120
AA1 3 VAL A 12 ? MET A 17 ? VAL A 9 MET A 14
AA1 4 CYS A 215 ? SER A 220 ? CYS A 212 SER A 217
AA1 5 GLN A 238 ? LEU A 240 ? GLN A 235 LEU A 237
AA1 6 THR A 148 ? ILE A 150 ? THR A 145 ILE A 147
AA2 1 ILE A 50 ? VAL A 53 ? ILE A 47 VAL A 50
AA2 2 CYS A 37 ? VAL A 40 ? CYS A 34 VAL A 37
AA2 3 LEU A 79 ? GLN A 82 ? LEU A 76 GLN A 79
AA3 1 GLU A 85 ? SER A 86 ? GLU A 82 SER A 83
AA3 2 LYS A 89 ? ALA A 90 ? LYS A 86 ALA A 87
AA4 1 ILE A 322 ? ASN A 327 ? ILE A 319 ASN A 324
AA4 2 GLU A 417 ? PHE A 432 ? GLU A 414 PHE A 429
AA4 3 LEU A 334 ? THR A 336 ? LEU A 331 THR A 333
AA5 1 ILE A 322 ? ASN A 327 ? ILE A 319 ASN A 324
AA5 2 GLU A 417 ? PHE A 432 ? GLU A 414 PHE A 429
AA5 3 ALA A 366 ? VAL A 375 ? ALA A 363 VAL A 372
AA5 4 LEU A 384 ? ALA A 389 ? LEU A 381 ALA A 386
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
AA1 1 2 N GLU A 113 ? N GLU A 110 O TYR A 121 ? O TYR A 118
AA1 2 3 O VAL A 122 ? O VAL A 119 N ALA A 13 ? N ALA A 10
AA1 3 4 N VAL A 12 ? N VAL A 9 O SER A 220 ? O SER A 217
AA1 4 5 N ILE A 219 ? N ILE A 216 O THR A 239 ? O THR A 236
AA1 5 6 O LEU A 240 ? O LEU A 237 N TYR A 149 ? N TYR A 146
AA2 1 2 O ILE A 51 ? O ILE A 48 N VAL A 39 ? N VAL A 36
AA2 2 3 N VAL A 40 ? N VAL A 37 O ALA A 81 ? O ALA A 78
AA3 1 2 N SER A 86 ? N SER A 83 O LYS A 89 ? O LYS A 86
AA4 1 2 N ILE A 322 ? N ILE A 319 O ALA A 429 ? O ALA A 426
AA4 2 3 O TRP A 418 ? O TRP A 415 N ALA A 335 ? N ALA A 332
AA5 1 2 N ILE A 322 ? N ILE A 319 O ALA A 429 ? O ALA A 426
AA5 2 3 O THR A 423 ? O THR A 420 N ARG A 374 ? N ARG A 371
AA5 3 4 N VAL A 371 ? N VAL A 368 O ARG A 386 ? O ARG A 383
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A NI 501 ? 4 'binding site for residue NI A 501'
AC2 Software A DZ4 502 ? 15 'binding site for residue DZ4 A 502'
AC3 Software A MN 503 ? 5 'binding site for residue MN A 503'
AC4 Software A MN 504 ? 7 'binding site for residue MN A 504'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 4 ASP A 184 ? ASP A 181 . ? 2_555 ?
2 AC1 4 HIS A 292 ? HIS A 289 . ? 3_545 ?
3 AC1 4 HIS A 396 ? HIS A 393 . ? 1_555 ?
4 AC1 4 HIS A 400 ? HIS A 397 . ? 1_555 ?
5 AC2 15 ASP A 16 ? ASP A 13 . ? 1_555 ?
6 AC2 15 MET A 17 ? MET A 14 . ? 1_555 ?
7 AC2 15 ASP A 18 ? ASP A 15 . ? 1_555 ?
8 AC2 15 CYS A 19 ? CYS A 16 . ? 1_555 ?
9 AC2 15 PHE A 20 ? PHE A 17 . ? 1_555 ?
10 AC2 15 PHE A 21 ? PHE A 18 . ? 1_555 ?
11 AC2 15 ILE A 51 ? ILE A 48 . ? 1_555 ?
12 AC2 15 ALA A 52 ? ALA A 49 . ? 1_555 ?
13 AC2 15 TYR A 55 ? TYR A 52 . ? 1_555 ?
14 AC2 15 ARG A 58 ? ARG A 55 . ? 1_555 ?
15 AC2 15 ASP A 118 ? ASP A 115 . ? 1_555 ?
16 AC2 15 MN F . ? MN A 503 . ? 1_555 ?
17 AC2 15 MN G . ? MN A 504 . ? 1_555 ?
18 AC2 15 HOH H . ? HOH A 606 . ? 1_555 ?
19 AC2 15 DT B 8 ? DT P 9 . ? 1_555 ?
20 AC3 5 ASP A 16 ? ASP A 13 . ? 1_555 ?
21 AC3 5 MET A 17 ? MET A 14 . ? 1_555 ?
22 AC3 5 ASP A 118 ? ASP A 115 . ? 1_555 ?
23 AC3 5 DZ4 E . ? DZ4 A 502 . ? 1_555 ?
24 AC3 5 MN G . ? MN A 504 . ? 1_555 ?
25 AC4 7 ASP A 16 ? ASP A 13 . ? 1_555 ?
26 AC4 7 ASP A 118 ? ASP A 115 . ? 1_555 ?
27 AC4 7 GLU A 119 ? GLU A 116 . ? 1_555 ?
28 AC4 7 DZ4 E . ? DZ4 A 502 . ? 1_555 ?
29 AC4 7 MN F . ? MN A 503 . ? 1_555 ?
30 AC4 7 HOH H . ? HOH A 606 . ? 1_555 ?
31 AC4 7 DT B 8 ? DT P 9 . ? 1_555 ?
#
_atom_sites.entry_id 6M7V
_atom_sites.fract_transf_matrix[1][1] 0.015854
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.012287
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.006896
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
MN
N
NI
O
P
S
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 GLY 1 -2 ? ? ? A . n
A 1 2 PRO 2 -1 ? ? ? A . n
A 1 3 HIS 3 0 0 HIS HIS A . n
A 1 4 MET 4 1 1 MET MET A . n
A 1 5 ALA 5 2 2 ALA ALA A . n
A 1 6 THR 6 3 3 THR THR A . n
A 1 7 GLY 7 4 4 GLY GLY A . n
A 1 8 GLN 8 5 5 GLN GLN A . n
A 1 9 ASP 9 6 6 ASP ASP A . n
A 1 10 ARG 10 7 7 ARG ARG A . n
A 1 11 VAL 11 8 8 VAL VAL A . n
A 1 12 VAL 12 9 9 VAL VAL A . n
A 1 13 ALA 13 10 10 ALA ALA A . n
A 1 14 LEU 14 11 11 LEU LEU A . n
A 1 15 VAL 15 12 12 VAL VAL A . n
A 1 16 ASP 16 13 13 ASP ASP A . n
A 1 17 MET 17 14 14 MET MET A . n
A 1 18 ASP 18 15 15 ASP ASP A . n
A 1 19 CYS 19 16 16 CYS CYS A . n
A 1 20 PHE 20 17 17 PHE PHE A . n
A 1 21 PHE 21 18 18 PHE PHE A . n
A 1 22 VAL 22 19 19 VAL VAL A . n
A 1 23 GLN 23 20 20 GLN GLN A . n
A 1 24 VAL 24 21 21 VAL VAL A . n
A 1 25 GLU 25 22 22 GLU GLU A . n
A 1 26 GLN 26 23 23 GLN GLN A . n
A 1 27 ARG 27 24 24 ARG ARG A . n
A 1 28 GLN 28 25 25 GLN GLN A . n
A 1 29 ASN 29 26 26 ASN ASN A . n
A 1 30 PRO 30 27 27 PRO PRO A . n
A 1 31 HIS 31 28 28 HIS HIS A . n
A 1 32 LEU 32 29 29 LEU LEU A . n
A 1 33 ARG 33 30 30 ARG ARG A . n
A 1 34 ASN 34 31 31 ASN ASN A . n
A 1 35 LYS 35 32 32 LYS LYS A . n
A 1 36 PRO 36 33 33 PRO PRO A . n
A 1 37 CYS 37 34 34 CYS CYS A . n
A 1 38 ALA 38 35 35 ALA ALA A . n
A 1 39 VAL 39 36 36 VAL VAL A . n
A 1 40 VAL 40 37 37 VAL VAL A . n
A 1 41 GLN 41 38 38 GLN GLN A . n
A 1 42 TYR 42 39 39 TYR TYR A . n
A 1 43 LYS 43 40 40 LYS LYS A . n
A 1 44 SER 44 41 41 SER SER A . n
A 1 45 TRP 45 42 42 TRP TRP A . n
A 1 46 LYS 46 43 43 LYS LYS A . n
A 1 47 GLY 47 44 44 GLY GLY A . n
A 1 48 GLY 48 45 45 GLY GLY A . n
A 1 49 GLY 49 46 46 GLY GLY A . n
A 1 50 ILE 50 47 47 ILE ILE A . n
A 1 51 ILE 51 48 48 ILE ILE A . n
A 1 52 ALA 52 49 49 ALA ALA A . n
A 1 53 VAL 53 50 50 VAL VAL A . n
A 1 54 SER 54 51 51 SER SER A . n
A 1 55 TYR 55 52 52 TYR TYR A . n
A 1 56 GLU 56 53 53 GLU GLU A . n
A 1 57 ALA 57 54 54 ALA ALA A . n
A 1 58 ARG 58 55 55 ARG ARG A . n
A 1 59 ALA 59 56 56 ALA ALA A . n
A 1 60 PHE 60 57 57 PHE PHE A . n
A 1 61 GLY 61 58 58 GLY GLY A . n
A 1 62 VAL 62 59 59 VAL VAL A . n
A 1 63 THR 63 60 60 THR THR A . n
A 1 64 ARG 64 61 61 ARG ARG A . n
A 1 65 SER 65 62 62 SER SER A . n
A 1 66 MET 66 63 63 MET MET A . n
A 1 67 TRP 67 64 64 TRP TRP A . n
A 1 68 ALA 68 65 65 ALA ALA A . n
A 1 69 ASP 69 66 66 ASP ASP A . n
A 1 70 ASP 70 67 67 ASP ASP A . n
A 1 71 ALA 71 68 68 ALA ALA A . n
A 1 72 LYS 72 69 69 LYS LYS A . n
A 1 73 LYS 73 70 70 LYS LYS A . n
A 1 74 LEU 74 71 71 LEU LEU A . n
A 1 75 CYS 75 72 72 CYS CYS A . n
A 1 76 PRO 76 73 73 PRO PRO A . n
A 1 77 ASP 77 74 74 ASP ASP A . n
A 1 78 LEU 78 75 75 LEU LEU A . n
A 1 79 LEU 79 76 76 LEU LEU A . n
A 1 80 LEU 80 77 77 LEU LEU A . n
A 1 81 ALA 81 78 78 ALA ALA A . n
A 1 82 GLN 82 79 79 GLN GLN A . n
A 1 83 VAL 83 80 80 VAL VAL A . n
A 1 84 ARG 84 81 81 ARG ARG A . n
A 1 85 GLU 85 82 82 GLU GLU A . n
A 1 86 SER 86 83 83 SER SER A . n
A 1 87 ARG 87 84 84 ARG ARG A . n
A 1 88 GLY 88 85 85 GLY GLY A . n
A 1 89 LYS 89 86 86 LYS LYS A . n
A 1 90 ALA 90 87 87 ALA ALA A . n
A 1 91 ASN 91 88 88 ASN ASN A . n
A 1 92 LEU 92 89 89 LEU LEU A . n
A 1 93 THR 93 90 90 THR THR A . n
A 1 94 LYS 94 91 91 LYS LYS A . n
A 1 95 TYR 95 92 92 TYR TYR A . n
A 1 96 ARG 96 93 93 ARG ARG A . n
A 1 97 GLU 97 94 94 GLU GLU A . n
A 1 98 ALA 98 95 95 ALA ALA A . n
A 1 99 SER 99 96 96 SER SER A . n
A 1 100 VAL 100 97 97 VAL VAL A . n
A 1 101 GLU 101 98 98 GLU GLU A . n
A 1 102 VAL 102 99 99 VAL VAL A . n
A 1 103 MET 103 100 100 MET MET A . n
A 1 104 GLU 104 101 101 GLU GLU A . n
A 1 105 ILE 105 102 102 ILE ILE A . n
A 1 106 MET 106 103 103 MET MET A . n
A 1 107 SER 107 104 104 SER SER A . n
A 1 108 ARG 108 105 105 ARG ARG A . n
A 1 109 PHE 109 106 106 PHE PHE A . n
A 1 110 ALA 110 107 107 ALA ALA A . n
A 1 111 VAL 111 108 108 VAL VAL A . n
A 1 112 ILE 112 109 109 ILE ILE A . n
A 1 113 GLU 113 110 110 GLU GLU A . n
A 1 114 ARG 114 111 111 ARG ARG A . n
A 1 115 ALA 115 112 112 ALA ALA A . n
A 1 116 SER 116 113 113 SER SER A . n
A 1 117 ILE 117 114 114 ILE ILE A . n
A 1 118 ASP 118 115 115 ASP ASP A . n
A 1 119 GLU 119 116 116 GLU GLU A . n
A 1 120 ALA 120 117 117 ALA ALA A . n
A 1 121 TYR 121 118 118 TYR TYR A . n
A 1 122 VAL 122 119 119 VAL VAL A . n
A 1 123 ASP 123 120 120 ASP ASP A . n
A 1 124 LEU 124 121 121 LEU LEU A . n
A 1 125 THR 125 122 122 THR THR A . n
A 1 126 SER 126 123 123 SER SER A . n
A 1 127 ALA 127 124 124 ALA ALA A . n
A 1 128 VAL 128 125 125 VAL VAL A . n
A 1 129 GLN 129 126 126 GLN GLN A . n
A 1 130 GLU 130 127 127 GLU GLU A . n
A 1 131 ARG 131 128 128 ARG ARG A . n
A 1 132 LEU 132 129 129 LEU LEU A . n
A 1 133 GLN 133 130 130 GLN GLN A . n
A 1 134 LYS 134 131 131 LYS LYS A . n
A 1 135 LEU 135 132 132 LEU LEU A . n
A 1 136 GLN 136 133 133 GLN GLN A . n
A 1 137 GLY 137 134 134 GLY GLY A . n
A 1 138 GLN 138 135 135 GLN GLN A . n
A 1 139 PRO 139 136 136 PRO PRO A . n
A 1 140 ILE 140 137 137 ILE ILE A . n
A 1 141 SER 141 138 138 SER SER A . n
A 1 142 ALA 142 139 139 ALA ALA A . n
A 1 143 ASP 143 140 140 ASP ASP A . n
A 1 144 LEU 144 141 141 LEU LEU A . n
A 1 145 LEU 145 142 142 LEU LEU A . n
A 1 146 PRO 146 143 143 PRO PRO A . n
A 1 147 SER 147 144 144 SER SER A . n
A 1 148 THR 148 145 145 THR THR A . n
A 1 149 TYR 149 146 146 TYR TYR A . n
A 1 150 ILE 150 147 147 ILE ILE A . n
A 1 151 GLU 151 148 148 GLU GLU A . n
A 1 152 GLY 152 149 149 GLY GLY A . n
A 1 153 LEU 153 150 150 LEU LEU A . n
A 1 154 PRO 154 151 151 PRO PRO A . n
A 1 155 GLN 155 152 152 GLN GLN A . n
A 1 156 GLY 156 153 153 GLY GLY A . n
A 1 157 PRO 157 154 ? ? ? A . n
A 1 158 THR 158 155 ? ? ? A . n
A 1 159 THR 159 156 ? ? ? A . n
A 1 160 ALA 160 157 ? ? ? A . n
A 1 161 GLU 161 158 ? ? ? A . n
A 1 162 GLU 162 159 ? ? ? A . n
A 1 163 THR 163 160 ? ? ? A . n
A 1 164 VAL 164 161 ? ? ? A . n
A 1 165 GLN 165 162 ? ? ? A . n
A 1 166 LYS 166 163 163 LYS LYS A . n
A 1 167 GLU 167 164 164 GLU GLU A . n
A 1 168 GLY 168 165 165 GLY GLY A . n
A 1 169 MET 169 166 166 MET MET A . n
A 1 170 ARG 170 167 167 ARG ARG A . n
A 1 171 LYS 171 168 168 LYS LYS A . n
A 1 172 GLN 172 169 169 GLN GLN A . n
A 1 173 GLY 173 170 170 GLY GLY A . n
A 1 174 LEU 174 171 171 LEU LEU A . n
A 1 175 PHE 175 172 172 PHE PHE A . n
A 1 176 GLN 176 173 173 GLN GLN A . n
A 1 177 TRP 177 174 174 TRP TRP A . n
A 1 178 LEU 178 175 175 LEU LEU A . n
A 1 179 ASP 179 176 176 ASP ASP A . n
A 1 180 SER 180 177 177 SER SER A . n
A 1 181 LEU 181 178 178 LEU LEU A . n
A 1 182 GLN 182 179 179 GLN GLN A . n
A 1 183 ILE 183 180 180 ILE ILE A . n
A 1 184 ASP 184 181 181 ASP ASP A . n
A 1 185 ASN 185 182 182 ASN ASN A . n
A 1 186 LEU 186 183 183 LEU LEU A . n
A 1 187 THR 187 184 184 THR THR A . n
A 1 188 SER 188 185 185 SER SER A . n
A 1 189 PRO 189 186 186 PRO PRO A . n
A 1 190 ASP 190 187 187 ASP ASP A . n
A 1 191 LEU 191 188 188 LEU LEU A . n
A 1 192 GLN 192 189 189 GLN GLN A . n
A 1 193 LEU 193 190 190 LEU LEU A . n
A 1 194 THR 194 191 191 THR THR A . n
A 1 195 VAL 195 192 192 VAL VAL A . n
A 1 196 GLY 196 193 193 GLY GLY A . n
A 1 197 ALA 197 194 194 ALA ALA A . n
A 1 198 VAL 198 195 195 VAL VAL A . n
A 1 199 ILE 199 196 196 ILE ILE A . n
A 1 200 VAL 200 197 197 VAL VAL A . n
A 1 201 GLU 201 198 198 GLU GLU A . n
A 1 202 GLU 202 199 199 GLU GLU A . n
A 1 203 MET 203 200 200 MET MET A . n
A 1 204 ARG 204 201 201 ARG ARG A . n
A 1 205 ALA 205 202 202 ALA ALA A . n
A 1 206 ALA 206 203 203 ALA ALA A . n
A 1 207 ILE 207 204 204 ILE ILE A . n
A 1 208 GLU 208 205 205 GLU GLU A . n
A 1 209 ARG 209 206 206 ARG ARG A . n
A 1 210 GLU 210 207 207 GLU GLU A . n
A 1 211 THR 211 208 208 THR THR A . n
A 1 212 GLY 212 209 209 GLY GLY A . n
A 1 213 PHE 213 210 210 PHE PHE A . n
A 1 214 GLN 214 211 211 GLN GLN A . n
A 1 215 CYS 215 212 212 CYS CYS A . n
A 1 216 SER 216 213 213 SER SER A . n
A 1 217 ALA 217 214 214 ALA ALA A . n
A 1 218 GLY 218 215 215 GLY GLY A . n
A 1 219 ILE 219 216 216 ILE ILE A . n
A 1 220 SER 220 217 217 SER SER A . n
A 1 221 HIS 221 218 218 HIS HIS A . n
A 1 222 ASN 222 219 219 ASN ASN A . n
A 1 223 LYS 223 220 220 LYS LYS A . n
A 1 224 VAL 224 221 221 VAL VAL A . n
A 1 225 LEU 225 222 222 LEU LEU A . n
A 1 226 ALA 226 223 223 ALA ALA A . n
A 1 227 LYS 227 224 224 LYS LYS A . n
A 1 228 LEU 228 225 225 LEU LEU A . n
A 1 229 ALA 229 226 226 ALA ALA A . n
A 1 230 CYS 230 227 227 CYS CYS A . n
A 1 231 GLY 231 228 228 GLY GLY A . n
A 1 232 LEU 232 229 229 LEU LEU A . n
A 1 233 ASN 233 230 230 ASN ASN A . n
A 1 234 LYS 234 231 231 LYS LYS A . n
A 1 235 PRO 235 232 232 PRO PRO A . n
A 1 236 ASN 236 233 233 ASN ASN A . n
A 1 237 ARG 237 234 234 ARG ARG A . n
A 1 238 GLN 238 235 235 GLN GLN A . n
A 1 239 THR 239 236 236 THR THR A . n
A 1 240 LEU 240 237 237 LEU LEU A . n
A 1 241 VAL 241 238 238 VAL VAL A . n
A 1 242 SER 242 239 239 SER SER A . n
A 1 243 HIS 243 240 240 HIS HIS A . n
A 1 244 GLY 244 241 241 GLY GLY A . n
A 1 245 SER 245 242 242 SER SER A . n
A 1 246 VAL 246 243 243 VAL VAL A . n
A 1 247 PRO 247 244 244 PRO PRO A . n
A 1 248 GLN 248 245 245 GLN GLN A . n
A 1 249 LEU 249 246 246 LEU LEU A . n
A 1 250 PHE 250 247 247 PHE PHE A . n
A 1 251 SER 251 248 248 SER SER A . n
A 1 252 GLN 252 249 249 GLN GLN A . n
A 1 253 MET 253 250 250 MET MET A . n
A 1 254 PRO 254 251 251 PRO PRO A . n
A 1 255 ILE 255 252 252 ILE ILE A . n
A 1 256 ARG 256 253 253 ARG ARG A . n
A 1 257 LYS 257 254 254 LYS LYS A . n
A 1 258 ILE 258 255 255 ILE ILE A . n
A 1 259 ARG 259 256 256 ARG ARG A . n
A 1 260 SER 260 257 257 SER SER A . n
A 1 261 LEU 261 258 258 LEU LEU A . n
A 1 262 GLY 262 259 259 GLY GLY A . n
A 1 263 GLY 263 260 260 GLY GLY A . n
A 1 264 LYS 264 261 261 LYS LYS A . n
A 1 265 LEU 265 262 262 LEU LEU A . n
A 1 266 GLY 266 263 263 GLY GLY A . n
A 1 267 ALA 267 264 264 ALA ALA A . n
A 1 268 SER 268 265 265 SER SER A . n
A 1 269 VAL 269 266 266 VAL VAL A . n
A 1 270 ILE 270 267 267 ILE ILE A . n
A 1 271 GLU 271 268 268 GLU GLU A . n
A 1 272 ILE 272 269 269 ILE ILE A . n
A 1 273 LEU 273 270 270 LEU LEU A . n
A 1 274 GLY 274 271 271 GLY GLY A . n
A 1 275 ILE 275 272 272 ILE ILE A . n
A 1 276 GLU 276 273 273 GLU GLU A . n
A 1 277 TYR 277 274 274 TYR TYR A . n
A 1 278 MET 278 275 275 MET MET A . n
A 1 279 GLY 279 276 276 GLY GLY A . n
A 1 280 GLU 280 277 277 GLU GLU A . n
A 1 281 LEU 281 278 278 LEU LEU A . n
A 1 282 THR 282 279 279 THR THR A . n
A 1 283 GLN 283 280 280 GLN GLN A . n
A 1 284 PHE 284 281 281 PHE PHE A . n
A 1 285 THR 285 282 282 THR THR A . n
A 1 286 GLU 286 283 283 GLU GLU A . n
A 1 287 SER 287 284 284 SER SER A . n
A 1 288 GLN 288 285 285 GLN GLN A . n
A 1 289 LEU 289 286 286 LEU LEU A . n
A 1 290 GLN 290 287 287 GLN GLN A . n
A 1 291 SER 291 288 288 SER SER A . n
A 1 292 HIS 292 289 289 HIS HIS A . n
A 1 293 PHE 293 290 290 PHE PHE A . n
A 1 294 GLY 294 291 291 GLY GLY A . n
A 1 295 GLU 295 292 292 GLU GLU A . n
A 1 296 LYS 296 293 293 LYS LYS A . n
A 1 297 ASN 297 294 294 ASN ASN A . n
A 1 298 GLY 298 295 295 GLY GLY A . n
A 1 299 SER 299 296 296 SER SER A . n
A 1 300 TRP 300 297 297 TRP TRP A . n
A 1 301 LEU 301 298 298 LEU LEU A . n
A 1 302 TYR 302 299 299 TYR TYR A . n
A 1 303 ALA 303 300 300 ALA ALA A . n
A 1 304 MET 304 301 301 MET MET A . n
A 1 305 CYS 305 302 302 CYS CYS A . n
A 1 306 ARG 306 303 303 ARG ARG A . n
A 1 307 GLY 307 304 304 GLY GLY A . n
A 1 308 ILE 308 305 305 ILE ILE A . n
A 1 309 GLU 309 306 306 GLU GLU A . n
A 1 310 HIS 310 307 307 HIS HIS A . n
A 1 311 ASP 311 308 308 ASP ASP A . n
A 1 312 PRO 312 309 309 PRO PRO A . n
A 1 313 VAL 313 310 310 VAL VAL A . n
A 1 314 LYS 314 311 311 LYS LYS A . n
A 1 315 PRO 315 312 312 PRO PRO A . n
A 1 316 ARG 316 313 313 ARG ARG A . n
A 1 317 GLN 317 314 314 GLN GLN A . n
A 1 318 LEU 318 315 315 LEU LEU A . n
A 1 319 PRO 319 316 316 PRO PRO A . n
A 1 320 LYS 320 317 317 LYS LYS A . n
A 1 321 THR 321 318 318 THR THR A . n
A 1 322 ILE 322 319 319 ILE ILE A . n
A 1 323 GLY 323 320 320 GLY GLY A . n
A 1 324 CYS 324 321 321 CYS CYS A . n
A 1 325 SER 325 322 322 SER SER A . n
A 1 326 LYS 326 323 323 LYS LYS A . n
A 1 327 ASN 327 324 324 ASN ASN A . n
A 1 328 PHE 328 325 325 PHE PHE A . n
A 1 329 PRO 329 326 326 PRO PRO A . n
A 1 330 GLY 330 327 327 GLY GLY A . n
A 1 331 LYS 331 328 328 LYS LYS A . n
A 1 332 THR 332 329 329 THR THR A . n
A 1 333 ALA 333 330 330 ALA ALA A . n
A 1 334 LEU 334 331 331 LEU LEU A . n
A 1 335 ALA 335 332 332 ALA ALA A . n
A 1 336 THR 336 333 333 THR THR A . n
A 1 337 ARG 337 334 334 ARG ARG A . n
A 1 338 GLU 338 335 335 GLU GLU A . n
A 1 339 GLN 339 336 336 GLN GLN A . n
A 1 340 VAL 340 337 337 VAL VAL A . n
A 1 341 GLN 341 338 338 GLN GLN A . n
A 1 342 TRP 342 339 339 TRP TRP A . n
A 1 343 TRP 343 340 340 TRP TRP A . n
A 1 344 LEU 344 341 341 LEU LEU A . n
A 1 345 LEU 345 342 342 LEU LEU A . n
A 1 346 GLN 346 343 343 GLN GLN A . n
A 1 347 LEU 347 344 344 LEU LEU A . n
A 1 348 ALA 348 345 345 ALA ALA A . n
A 1 349 GLN 349 346 346 GLN GLN A . n
A 1 350 GLU 350 347 347 GLU GLU A . n
A 1 351 LEU 351 348 348 LEU LEU A . n
A 1 352 GLU 352 349 349 GLU GLU A . n
A 1 353 GLU 353 350 350 GLU GLU A . n
A 1 354 ARG 354 351 351 ARG ARG A . n
A 1 355 LEU 355 352 352 LEU LEU A . n
A 1 356 THR 356 353 353 THR THR A . n
A 1 357 LYS 357 354 354 LYS LYS A . n
A 1 358 ASP 358 355 355 ASP ASP A . n
A 1 359 ARG 359 356 356 ARG ARG A . n
A 1 360 ASN 360 357 357 ASN ASN A . n
A 1 361 ASP 361 358 358 ASP ASP A . n
A 1 362 ASN 362 359 359 ASN ASN A . n
A 1 363 ASP 363 360 360 ASP ASP A . n
A 1 364 ARG 364 361 361 ARG ARG A . n
A 1 365 VAL 365 362 362 VAL VAL A . n
A 1 366 ALA 366 363 363 ALA ALA A . n
A 1 367 THR 367 364 364 THR THR A . n
A 1 368 GLN 368 365 365 GLN GLN A . n
A 1 369 LEU 369 366 366 LEU LEU A . n
A 1 370 VAL 370 367 367 VAL VAL A . n
A 1 371 VAL 371 368 368 VAL VAL A . n
A 1 372 SER 372 369 369 SER SER A . n
A 1 373 ILE 373 370 370 ILE ILE A . n
A 1 374 ARG 374 371 371 ARG ARG A . n
A 1 375 VAL 375 372 372 VAL VAL A . n
A 1 376 GLN 376 373 373 GLN GLN A . n
A 1 377 GLY 377 374 374 GLY GLY A . n
A 1 378 ASP 378 375 375 ASP ASP A . n
A 1 379 LYS 379 376 376 LYS LYS A . n
A 1 380 ARG 380 377 377 ARG ARG A . n
A 1 381 LEU 381 378 378 LEU LEU A . n
A 1 382 SER 382 379 379 SER SER A . n
A 1 383 SER 383 380 380 SER SER A . n
A 1 384 LEU 384 381 381 LEU LEU A . n
A 1 385 ARG 385 382 382 ARG ARG A . n
A 1 386 ARG 386 383 383 ARG ARG A . n
A 1 387 CYS 387 384 384 CYS CYS A . n
A 1 388 CYS 388 385 385 CYS CYS A . n
A 1 389 ALA 389 386 386 ALA ALA A . n
A 1 390 LEU 390 387 387 LEU LEU A . n
A 1 391 THR 391 388 388 THR THR A . n
A 1 392 ARG 392 389 389 ARG ARG A . n
A 1 393 TYR 393 390 390 TYR TYR A . n
A 1 394 ASP 394 391 391 ASP ASP A . n
A 1 395 ALA 395 392 392 ALA ALA A . n
A 1 396 HIS 396 393 393 HIS HIS A . n
A 1 397 LYS 397 394 394 LYS LYS A . n
A 1 398 MET 398 395 395 MET MET A . n
A 1 399 SER 399 396 396 SER SER A . n
A 1 400 HIS 400 397 397 HIS HIS A . n
A 1 401 ASP 401 398 398 ASP ASP A . n
A 1 402 ALA 402 399 399 ALA ALA A . n
A 1 403 PHE 403 400 400 PHE PHE A . n
A 1 404 THR 404 401 401 THR THR A . n
A 1 405 VAL 405 402 402 VAL VAL A . n
A 1 406 ILE 406 403 403 ILE ILE A . n
A 1 407 LYS 407 404 404 LYS LYS A . n
A 1 408 ASN 408 405 405 ASN ASN A . n
A 1 409 CYS 409 406 406 CYS CYS A . n
A 1 410 ASN 410 407 407 ASN ASN A . n
A 1 411 THR 411 408 408 THR THR A . n
A 1 412 SER 412 409 409 SER SER A . n
A 1 413 GLY 413 410 410 GLY GLY A . n
A 1 414 ILE 414 411 411 ILE ILE A . n
A 1 415 GLN 415 412 412 GLN GLN A . n
A 1 416 THR 416 413 413 THR THR A . n
A 1 417 GLU 417 414 414 GLU GLU A . n
A 1 418 TRP 418 415 415 TRP TRP A . n
A 1 419 SER 419 416 416 SER SER A . n
A 1 420 PRO 420 417 417 PRO PRO A . n
A 1 421 PRO 421 418 418 PRO PRO A . n
A 1 422 LEU 422 419 419 LEU LEU A . n
A 1 423 THR 423 420 420 THR THR A . n
A 1 424 MET 424 421 421 MET MET A . n
A 1 425 LEU 425 422 422 LEU LEU A . n
A 1 426 PHE 426 423 423 PHE PHE A . n
A 1 427 LEU 427 424 424 LEU LEU A . n
A 1 428 CYS 428 425 425 CYS CYS A . n
A 1 429 ALA 429 426 426 ALA ALA A . n
A 1 430 THR 430 427 427 THR THR A . n
A 1 431 LYS 431 428 428 LYS LYS A . n
A 1 432 PHE 432 429 429 PHE PHE A . n
A 1 433 SER 433 430 430 SER SER A . n
A 1 434 ALA 434 431 ? ? ? A . n
A 1 435 SER 435 432 ? ? ? A . n
B 2 1 DG 1 2 2 DG DG P . n
B 2 2 DT 2 3 3 DT DT P . n
B 2 3 DG 3 4 4 DG DG P . n
B 2 4 DT 4 5 5 DT DT P . n
B 2 5 DG 5 6 6 DG DG P . n
B 2 6 DA 6 7 7 DA DA P . n
B 2 7 DG 7 8 8 DG DG P . n
B 2 8 DT 8 9 9 DT DT P . n
C 3 1 02I 1 4 4 02I 02I T . n
C 3 2 DC 2 5 5 DC DC T . n
C 3 3 DT 3 6 6 DT DT T . n
C 3 4 DC 4 7 7 DC DC T . n
C 3 5 DA 5 8 8 DA DA T . n
C 3 6 DC 6 9 9 DC DC T . n
C 3 7 DA 7 10 10 DA DA T . n
C 3 8 DC 8 11 11 DC DC T . n
C 3 9 DT 9 12 12 DT DT T . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 NI 1 501 452 NI NI A .
E 5 DZ4 1 502 433 DZ4 DZ4 A .
F 6 MN 1 503 1 MN MN A .
G 6 MN 1 504 2 MN MN A .
H 7 HOH 1 601 15 HOH HOH A .
H 7 HOH 2 602 13 HOH HOH A .
H 7 HOH 3 603 10 HOH HOH A .
H 7 HOH 4 604 42 HOH HOH A .
H 7 HOH 5 605 27 HOH HOH A .
H 7 HOH 6 606 1 HOH HOH A .
H 7 HOH 7 607 14 HOH HOH A .
H 7 HOH 8 608 2 HOH HOH A .
H 7 HOH 9 609 41 HOH HOH A .
H 7 HOH 10 610 17 HOH HOH A .
H 7 HOH 11 611 5 HOH HOH A .
H 7 HOH 12 612 37 HOH HOH A .
I 7 HOH 1 101 21 HOH HOH P .
I 7 HOH 2 102 3 HOH HOH P .
I 7 HOH 3 103 40 HOH HOH P .
J 7 HOH 1 101 18 HOH HOH T .
J 7 HOH 2 102 9 HOH HOH T .
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details trimeric
_pdbx_struct_assembly.oligomeric_count 3
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 3200 ?
1 MORE -37 ?
1 'SSA (A^2)' 23690 ?
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 OD1 ? A ASP 16 ? A ASP 13 ? 1_555 MN ? F MN . ? A MN 503 ? 1_555 O ? A MET 17 ? A MET 14 ? 1_555 74.4 ?
2 OD1 ? A ASP 16 ? A ASP 13 ? 1_555 MN ? F MN . ? A MN 503 ? 1_555 OD1 ? A ASP 118 ? A ASP 115 ? 1_555 91.3 ?
3 O ? A MET 17 ? A MET 14 ? 1_555 MN ? F MN . ? A MN 503 ? 1_555 OD1 ? A ASP 118 ? A ASP 115 ? 1_555 91.2 ?
4 OD1 ? A ASP 16 ? A ASP 13 ? 1_555 MN ? F MN . ? A MN 503 ? 1_555 O1A ? E DZ4 . ? A DZ4 502 ? 1_555 102.2 ?
5 O ? A MET 17 ? A MET 14 ? 1_555 MN ? F MN . ? A MN 503 ? 1_555 O1A ? E DZ4 . ? A DZ4 502 ? 1_555 175.2 ?
6 OD1 ? A ASP 118 ? A ASP 115 ? 1_555 MN ? F MN . ? A MN 503 ? 1_555 O1A ? E DZ4 . ? A DZ4 502 ? 1_555 85.4 ?
7 OD1 ? A ASP 16 ? A ASP 13 ? 1_555 MN ? F MN . ? A MN 503 ? 1_555 O1B ? E DZ4 . ? A DZ4 502 ? 1_555 171.3 ?
8 O ? A MET 17 ? A MET 14 ? 1_555 MN ? F MN . ? A MN 503 ? 1_555 O1B ? E DZ4 . ? A DZ4 502 ? 1_555 101.2 ?
9 OD1 ? A ASP 118 ? A ASP 115 ? 1_555 MN ? F MN . ? A MN 503 ? 1_555 O1B ? E DZ4 . ? A DZ4 502 ? 1_555 96.4 ?
10 O1A ? E DZ4 . ? A DZ4 502 ? 1_555 MN ? F MN . ? A MN 503 ? 1_555 O1B ? E DZ4 . ? A DZ4 502 ? 1_555 82.5 ?
11 OD1 ? A ASP 16 ? A ASP 13 ? 1_555 MN ? F MN . ? A MN 503 ? 1_555 O1G ? E DZ4 . ? A DZ4 502 ? 1_555 72.7 ?
12 O ? A MET 17 ? A MET 14 ? 1_555 MN ? F MN . ? A MN 503 ? 1_555 O1G ? E DZ4 . ? A DZ4 502 ? 1_555 69.8 ?
13 OD1 ? A ASP 118 ? A ASP 115 ? 1_555 MN ? F MN . ? A MN 503 ? 1_555 O1G ? E DZ4 . ? A DZ4 502 ? 1_555 157.6 ?
14 O1A ? E DZ4 . ? A DZ4 502 ? 1_555 MN ? F MN . ? A MN 503 ? 1_555 O1G ? E DZ4 . ? A DZ4 502 ? 1_555 112.8 ?
15 O1B ? E DZ4 . ? A DZ4 502 ? 1_555 MN ? F MN . ? A MN 503 ? 1_555 O1G ? E DZ4 . ? A DZ4 502 ? 1_555 98.8 ?
16 OD2 ? A ASP 16 ? A ASP 13 ? 1_555 MN ? G MN . ? A MN 504 ? 1_555 OD2 ? A ASP 118 ? A ASP 115 ? 1_555 94.9 ?
17 OD2 ? A ASP 16 ? A ASP 13 ? 1_555 MN ? G MN . ? A MN 504 ? 1_555 OE2 ? A GLU 119 ? A GLU 116 ? 1_555 80.0 ?
18 OD2 ? A ASP 118 ? A ASP 115 ? 1_555 MN ? G MN . ? A MN 504 ? 1_555 OE2 ? A GLU 119 ? A GLU 116 ? 1_555 93.7 ?
19 OD2 ? A ASP 16 ? A ASP 13 ? 1_555 MN ? G MN . ? A MN 504 ? 1_555 O1A ? E DZ4 . ? A DZ4 502 ? 1_555 103.0 ?
20 OD2 ? A ASP 118 ? A ASP 115 ? 1_555 MN ? G MN . ? A MN 504 ? 1_555 O1A ? E DZ4 . ? A DZ4 502 ? 1_555 100.6 ?
21 OE2 ? A GLU 119 ? A GLU 116 ? 1_555 MN ? G MN . ? A MN 504 ? 1_555 O1A ? E DZ4 . ? A DZ4 502 ? 1_555 165.0 ?
22 OD2 ? A ASP 16 ? A ASP 13 ? 1_555 MN ? G MN . ? A MN 504 ? 1_555 O ? H HOH . ? A HOH 606 ? 1_555 83.0 ?
23 OD2 ? A ASP 118 ? A ASP 115 ? 1_555 MN ? G MN . ? A MN 504 ? 1_555 O ? H HOH . ? A HOH 606 ? 1_555 177.9 ?
24 OE2 ? A GLU 119 ? A GLU 116 ? 1_555 MN ? G MN . ? A MN 504 ? 1_555 O ? H HOH . ? A HOH 606 ? 1_555 86.1 ?
25 O1A ? E DZ4 . ? A DZ4 502 ? 1_555 MN ? G MN . ? A MN 504 ? 1_555 O ? H HOH . ? A HOH 606 ? 1_555 79.8 ?
26 OD2 ? A ASP 16 ? A ASP 13 ? 1_555 MN ? G MN . ? A MN 504 ? 1_555 OP1 ? B DT 8 ? P DT 9 ? 1_555 157.5 ?
27 OD2 ? A ASP 118 ? A ASP 115 ? 1_555 MN ? G MN . ? A MN 504 ? 1_555 OP1 ? B DT 8 ? P DT 9 ? 1_555 98.2 ?
28 OE2 ? A GLU 119 ? A GLU 116 ? 1_555 MN ? G MN . ? A MN 504 ? 1_555 OP1 ? B DT 8 ? P DT 9 ? 1_555 80.9 ?
29 O1A ? E DZ4 . ? A DZ4 502 ? 1_555 MN ? G MN . ? A MN 504 ? 1_555 OP1 ? B DT 8 ? P DT 9 ? 1_555 92.6 ?
30 O ? H HOH . ? A HOH 606 ? 1_555 MN ? G MN . ? A MN 504 ? 1_555 OP1 ? B DT 8 ? P DT 9 ? 1_555 83.9 ?
31 OD2 ? A ASP 184 ? A ASP 181 ? 1_555 NI ? D NI . ? A NI 501 ? 2_554 NE2 ? A HIS 292 ? A HIS 289 ? 1_555 26.8 ?
32 OD2 ? A ASP 184 ? A ASP 181 ? 1_555 NI ? D NI . ? A NI 501 ? 2_554 NE2 ? A HIS 396 ? A HIS 393 ? 1_555 30.7 ?
33 NE2 ? A HIS 292 ? A HIS 289 ? 1_555 NI ? D NI . ? A NI 501 ? 2_554 NE2 ? A HIS 396 ? A HIS 393 ? 1_555 50.1 ?
34 OD2 ? A ASP 184 ? A ASP 181 ? 1_555 NI ? D NI . ? A NI 501 ? 2_554 NE2 ? A HIS 400 ? A HIS 397 ? 1_555 28.5 ?
35 NE2 ? A HIS 292 ? A HIS 289 ? 1_555 NI ? D NI . ? A NI 501 ? 2_554 NE2 ? A HIS 400 ? A HIS 397 ? 1_555 48.1 ?
36 NE2 ? A HIS 396 ? A HIS 393 ? 1_555 NI ? D NI . ? A NI 501 ? 2_554 NE2 ? A HIS 400 ? A HIS 397 ? 1_555 2.2 ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2018-09-12
2 'Structure model' 1 1 2018-10-17
3 'Structure model' 1 2 2018-10-24
4 'Structure model' 1 3 2019-12-25
5 'Structure model' 1 4 2023-10-11
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Data collection'
2 2 'Structure model' 'Database references'
3 3 'Structure model' 'Data collection'
4 3 'Structure model' 'Database references'
5 4 'Structure model' 'Author supporting evidence'
6 5 'Structure model' 'Data collection'
7 5 'Structure model' 'Database references'
8 5 'Structure model' 'Derived calculations'
9 5 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' citation
2 2 'Structure model' citation_author
3 3 'Structure model' citation
4 4 'Structure model' pdbx_audit_support
5 5 'Structure model' chem_comp_atom
6 5 'Structure model' chem_comp_bond
7 5 'Structure model' database_2
8 5 'Structure model' pdbx_initial_refinement_model
9 5 'Structure model' pdbx_struct_conn_angle
10 5 'Structure model' struct_conn
11 5 'Structure model' struct_conn_type
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_citation.journal_abbrev'
2 2 'Structure model' '_citation.pdbx_database_id_DOI'
3 2 'Structure model' '_citation.pdbx_database_id_PubMed'
4 2 'Structure model' '_citation.title'
5 2 'Structure model' '_citation_author.identifier_ORCID'
6 2 'Structure model' '_citation_author.name'
7 3 'Structure model' '_citation.journal_volume'
8 3 'Structure model' '_citation.page_first'
9 3 'Structure model' '_citation.page_last'
10 4 'Structure model' '_pdbx_audit_support.funding_organization'
11 5 'Structure model' '_database_2.pdbx_DOI'
12 5 'Structure model' '_database_2.pdbx_database_accession'
13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id'
14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'
15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id'
17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id'
18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id'
19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'
20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_symmetry'
21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id'
22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id'
23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
24 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id'
25 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id'
26 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id'
27 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'
28 5 'Structure model' '_pdbx_struct_conn_angle.value'
29 5 'Structure model' '_struct_conn.conn_type_id'
30 5 'Structure model' '_struct_conn.id'
31 5 'Structure model' '_struct_conn.pdbx_dist_value'
32 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
33 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
34 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
35 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
36 5 'Structure model' '_struct_conn.ptnr1_label_asym_id'
37 5 'Structure model' '_struct_conn.ptnr1_label_atom_id'
38 5 'Structure model' '_struct_conn.ptnr1_label_comp_id'
39 5 'Structure model' '_struct_conn.ptnr1_label_seq_id'
40 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
41 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
42 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
43 5 'Structure model' '_struct_conn.ptnr2_label_asym_id'
44 5 'Structure model' '_struct_conn.ptnr2_label_atom_id'
45 5 'Structure model' '_struct_conn.ptnr2_label_comp_id'
46 5 'Structure model' '_struct_conn.ptnr2_label_seq_id'
47 5 'Structure model' '_struct_conn.ptnr2_symmetry'
48 5 'Structure model' '_struct_conn_type.id'
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.12_2829: ???)' 1
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2
? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3
? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" P DG 8 ? ? "C1'" P DG 8 ? ? N9 P DG 8 ? ? 110.40 108.30 2.10 0.30 N
2 1 "O4'" T DT 12 ? ? "C1'" T DT 12 ? ? N1 T DT 12 ? ? 110.83 108.30 2.53 0.30 N
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 CYS A 16 ? ? 26.02 62.02
2 1 GLN A 38 ? ? -91.88 -66.41
3 1 LYS A 43 ? ? -151.41 32.26
4 1 ARG A 253 ? ? -69.31 0.29
5 1 SER A 257 ? ? 81.69 -1.89
6 1 ASN A 407 ? ? -41.60 106.69
7 1 GLN A 412 ? ? 84.32 -4.88
#
_pdbx_validate_planes.id 1
_pdbx_validate_planes.PDB_model_num 1
_pdbx_validate_planes.auth_comp_id ARG
_pdbx_validate_planes.auth_asym_id A
_pdbx_validate_planes.auth_seq_id 234
_pdbx_validate_planes.PDB_ins_code ?
_pdbx_validate_planes.label_alt_id ?
_pdbx_validate_planes.rmsd 0.283
_pdbx_validate_planes.type 'SIDE CHAIN'
#
loop_
_pdbx_unobs_or_zero_occ_residues.id
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.polymer_flag
_pdbx_unobs_or_zero_occ_residues.occupancy_flag
_pdbx_unobs_or_zero_occ_residues.auth_asym_id
_pdbx_unobs_or_zero_occ_residues.auth_comp_id
_pdbx_unobs_or_zero_occ_residues.auth_seq_id
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code
_pdbx_unobs_or_zero_occ_residues.label_asym_id
_pdbx_unobs_or_zero_occ_residues.label_comp_id
_pdbx_unobs_or_zero_occ_residues.label_seq_id
1 1 Y 1 A GLY -2 ? A GLY 1
2 1 Y 1 A PRO -1 ? A PRO 2
3 1 Y 1 A PRO 154 ? A PRO 157
4 1 Y 1 A THR 155 ? A THR 158
5 1 Y 1 A THR 156 ? A THR 159
6 1 Y 1 A ALA 157 ? A ALA 160
7 1 Y 1 A GLU 158 ? A GLU 161
8 1 Y 1 A GLU 159 ? A GLU 162
9 1 Y 1 A THR 160 ? A THR 163
10 1 Y 1 A VAL 161 ? A VAL 164
11 1 Y 1 A GLN 162 ? A GLN 165
12 1 Y 1 A ALA 431 ? A ALA 434
13 1 Y 1 A SER 432 ? A SER 435
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
02I P P N N 1
02I N1 N Y N 2
02I C2 C Y N 3
02I N3 N Y N 4
02I C4 C Y N 5
02I C5 C Y N 6
02I C6 C Y N 7
02I N6 N N N 8
02I N7 N Y N 9
02I C8 C Y N 10
02I N9 N Y N 11
02I "C1'" C N R 12
02I OP3 O N N 13
02I "C2'" C N N 14
02I OP2 O N N 15
02I "C3'" C N S 16
02I "O3'" O N N 17
02I "C4'" C N S 18
02I "O4'" O N N 19
02I "C5'" C N S 20
02I "O5'" O N N 21
02I H2 H N N 22
02I H1N6 H N N 23
02I H2N6 H N N 24
02I "H1'" H N N 25
02I "H12'" H N N 26
02I "H22'" H N N 27
02I "H3'" H N N 28
02I "H4'" H N N 29
02I "H5'" H N N 30
02I HOP3 H N N 31
02I HOP2 H N N 32
02I "HO3'" H N N 33
02I OP1 O N N 34
ALA N N N N 35
ALA CA C N S 36
ALA C C N N 37
ALA O O N N 38
ALA CB C N N 39
ALA OXT O N N 40
ALA H H N N 41
ALA H2 H N N 42
ALA HA H N N 43
ALA HB1 H N N 44
ALA HB2 H N N 45
ALA HB3 H N N 46
ALA HXT H N N 47
ARG N N N N 48
ARG CA C N S 49
ARG C C N N 50
ARG O O N N 51
ARG CB C N N 52
ARG CG C N N 53
ARG CD C N N 54
ARG NE N N N 55
ARG CZ C N N 56
ARG NH1 N N N 57
ARG NH2 N N N 58
ARG OXT O N N 59
ARG H H N N 60
ARG H2 H N N 61
ARG HA H N N 62
ARG HB2 H N N 63
ARG HB3 H N N 64
ARG HG2 H N N 65
ARG HG3 H N N 66
ARG HD2 H N N 67
ARG HD3 H N N 68
ARG HE H N N 69
ARG HH11 H N N 70
ARG HH12 H N N 71
ARG HH21 H N N 72
ARG HH22 H N N 73
ARG HXT H N N 74
ASN N N N N 75
ASN CA C N S 76
ASN C C N N 77
ASN O O N N 78
ASN CB C N N 79
ASN CG C N N 80
ASN OD1 O N N 81
ASN ND2 N N N 82
ASN OXT O N N 83
ASN H H N N 84
ASN H2 H N N 85
ASN HA H N N 86
ASN HB2 H N N 87
ASN HB3 H N N 88
ASN HD21 H N N 89
ASN HD22 H N N 90
ASN HXT H N N 91
ASP N N N N 92
ASP CA C N S 93
ASP C C N N 94
ASP O O N N 95
ASP CB C N N 96
ASP CG C N N 97
ASP OD1 O N N 98
ASP OD2 O N N 99
ASP OXT O N N 100
ASP H H N N 101
ASP H2 H N N 102
ASP HA H N N 103
ASP HB2 H N N 104
ASP HB3 H N N 105
ASP HD2 H N N 106
ASP HXT H N N 107
CYS N N N N 108
CYS CA C N R 109
CYS C C N N 110
CYS O O N N 111
CYS CB C N N 112
CYS SG S N N 113
CYS OXT O N N 114
CYS H H N N 115
CYS H2 H N N 116
CYS HA H N N 117
CYS HB2 H N N 118
CYS HB3 H N N 119
CYS HG H N N 120
CYS HXT H N N 121
DA OP3 O N N 122
DA P P N N 123
DA OP1 O N N 124
DA OP2 O N N 125
DA "O5'" O N N 126
DA "C5'" C N N 127
DA "C4'" C N R 128
DA "O4'" O N N 129
DA "C3'" C N S 130
DA "O3'" O N N 131
DA "C2'" C N N 132
DA "C1'" C N R 133
DA N9 N Y N 134
DA C8 C Y N 135
DA N7 N Y N 136
DA C5 C Y N 137
DA C6 C Y N 138
DA N6 N N N 139
DA N1 N Y N 140
DA C2 C Y N 141
DA N3 N Y N 142
DA C4 C Y N 143
DA HOP3 H N N 144
DA HOP2 H N N 145
DA "H5'" H N N 146
DA "H5''" H N N 147
DA "H4'" H N N 148
DA "H3'" H N N 149
DA "HO3'" H N N 150
DA "H2'" H N N 151
DA "H2''" H N N 152
DA "H1'" H N N 153
DA H8 H N N 154
DA H61 H N N 155
DA H62 H N N 156
DA H2 H N N 157
DC OP3 O N N 158
DC P P N N 159
DC OP1 O N N 160
DC OP2 O N N 161
DC "O5'" O N N 162
DC "C5'" C N N 163
DC "C4'" C N R 164
DC "O4'" O N N 165
DC "C3'" C N S 166
DC "O3'" O N N 167
DC "C2'" C N N 168
DC "C1'" C N R 169
DC N1 N N N 170
DC C2 C N N 171
DC O2 O N N 172
DC N3 N N N 173
DC C4 C N N 174
DC N4 N N N 175
DC C5 C N N 176
DC C6 C N N 177
DC HOP3 H N N 178
DC HOP2 H N N 179
DC "H5'" H N N 180
DC "H5''" H N N 181
DC "H4'" H N N 182
DC "H3'" H N N 183
DC "HO3'" H N N 184
DC "H2'" H N N 185
DC "H2''" H N N 186
DC "H1'" H N N 187
DC H41 H N N 188
DC H42 H N N 189
DC H5 H N N 190
DC H6 H N N 191
DG OP3 O N N 192
DG P P N N 193
DG OP1 O N N 194
DG OP2 O N N 195
DG "O5'" O N N 196
DG "C5'" C N N 197
DG "C4'" C N R 198
DG "O4'" O N N 199
DG "C3'" C N S 200
DG "O3'" O N N 201
DG "C2'" C N N 202
DG "C1'" C N R 203
DG N9 N Y N 204
DG C8 C Y N 205
DG N7 N Y N 206
DG C5 C Y N 207
DG C6 C N N 208
DG O6 O N N 209
DG N1 N N N 210
DG C2 C N N 211
DG N2 N N N 212
DG N3 N N N 213
DG C4 C Y N 214
DG HOP3 H N N 215
DG HOP2 H N N 216
DG "H5'" H N N 217
DG "H5''" H N N 218
DG "H4'" H N N 219
DG "H3'" H N N 220
DG "HO3'" H N N 221
DG "H2'" H N N 222
DG "H2''" H N N 223
DG "H1'" H N N 224
DG H8 H N N 225
DG H1 H N N 226
DG H21 H N N 227
DG H22 H N N 228
DT OP3 O N N 229
DT P P N N 230
DT OP1 O N N 231
DT OP2 O N N 232
DT "O5'" O N N 233
DT "C5'" C N N 234
DT "C4'" C N R 235
DT "O4'" O N N 236
DT "C3'" C N S 237
DT "O3'" O N N 238
DT "C2'" C N N 239
DT "C1'" C N R 240
DT N1 N N N 241
DT C2 C N N 242
DT O2 O N N 243
DT N3 N N N 244
DT C4 C N N 245
DT O4 O N N 246
DT C5 C N N 247
DT C7 C N N 248
DT C6 C N N 249
DT HOP3 H N N 250
DT HOP2 H N N 251
DT "H5'" H N N 252
DT "H5''" H N N 253
DT "H4'" H N N 254
DT "H3'" H N N 255
DT "HO3'" H N N 256
DT "H2'" H N N 257
DT "H2''" H N N 258
DT "H1'" H N N 259
DT H3 H N N 260
DT H71 H N N 261
DT H72 H N N 262
DT H73 H N N 263
DT H6 H N N 264
DZ4 N1 N Y N 265
DZ4 C2 C Y N 266
DZ4 N3 N Y N 267
DZ4 C4 C Y N 268
DZ4 C5 C Y N 269
DZ4 C6 C Y N 270
DZ4 N6 N N N 271
DZ4 N7 N Y N 272
DZ4 C8 C Y N 273
DZ4 N9 N Y N 274
DZ4 PA P N N 275
DZ4 PB P N N 276
DZ4 PG P N N 277
DZ4 "C1'" C N R 278
DZ4 O1A O N N 279
DZ4 O1B O N N 280
DZ4 O1G O N N 281
DZ4 "C2'" C N N 282
DZ4 O2A O N N 283
DZ4 O2B O N N 284
DZ4 O2G O N N 285
DZ4 "C3'" C N S 286
DZ4 "O3'" O N N 287
DZ4 N3A N N N 288
DZ4 O3B O N N 289
DZ4 O3G O N N 290
DZ4 "C4'" C N R 291
DZ4 "O4'" O N N 292
DZ4 "C5'" C N N 293
DZ4 "O5'" O N N 294
DZ4 H2 H N N 295
DZ4 HN6 H N N 296
DZ4 HN6A H N N 297
DZ4 H8 H N N 298
DZ4 "H1'" H N N 299
DZ4 "H2'" H N N 300
DZ4 "H2'A" H N N 301
DZ4 HO2A H N N 302
DZ4 HO2B H N N 303
DZ4 HO2G H N N 304
DZ4 "H3'" H N N 305
DZ4 "HO3'" H N N 306
DZ4 HN3A H N N 307
DZ4 HO3G H N N 308
DZ4 "H4'" H N N 309
DZ4 "H5'" H N N 310
DZ4 "H5'A" H N N 311
GLN N N N N 312
GLN CA C N S 313
GLN C C N N 314
GLN O O N N 315
GLN CB C N N 316
GLN CG C N N 317
GLN CD C N N 318
GLN OE1 O N N 319
GLN NE2 N N N 320
GLN OXT O N N 321
GLN H H N N 322
GLN H2 H N N 323
GLN HA H N N 324
GLN HB2 H N N 325
GLN HB3 H N N 326
GLN HG2 H N N 327
GLN HG3 H N N 328
GLN HE21 H N N 329
GLN HE22 H N N 330
GLN HXT H N N 331
GLU N N N N 332
GLU CA C N S 333
GLU C C N N 334
GLU O O N N 335
GLU CB C N N 336
GLU CG C N N 337
GLU CD C N N 338
GLU OE1 O N N 339
GLU OE2 O N N 340
GLU OXT O N N 341
GLU H H N N 342
GLU H2 H N N 343
GLU HA H N N 344
GLU HB2 H N N 345
GLU HB3 H N N 346
GLU HG2 H N N 347
GLU HG3 H N N 348
GLU HE2 H N N 349
GLU HXT H N N 350
GLY N N N N 351
GLY CA C N N 352
GLY C C N N 353
GLY O O N N 354
GLY OXT O N N 355
GLY H H N N 356
GLY H2 H N N 357
GLY HA2 H N N 358
GLY HA3 H N N 359
GLY HXT H N N 360
HIS N N N N 361
HIS CA C N S 362
HIS C C N N 363
HIS O O N N 364
HIS CB C N N 365
HIS CG C Y N 366
HIS ND1 N Y N 367
HIS CD2 C Y N 368
HIS CE1 C Y N 369
HIS NE2 N Y N 370
HIS OXT O N N 371
HIS H H N N 372
HIS H2 H N N 373
HIS HA H N N 374
HIS HB2 H N N 375
HIS HB3 H N N 376
HIS HD1 H N N 377
HIS HD2 H N N 378
HIS HE1 H N N 379
HIS HE2 H N N 380
HIS HXT H N N 381
HOH O O N N 382
HOH H1 H N N 383
HOH H2 H N N 384
ILE N N N N 385
ILE CA C N S 386
ILE C C N N 387
ILE O O N N 388
ILE CB C N S 389
ILE CG1 C N N 390
ILE CG2 C N N 391
ILE CD1 C N N 392
ILE OXT O N N 393
ILE H H N N 394
ILE H2 H N N 395
ILE HA H N N 396
ILE HB H N N 397
ILE HG12 H N N 398
ILE HG13 H N N 399
ILE HG21 H N N 400
ILE HG22 H N N 401
ILE HG23 H N N 402
ILE HD11 H N N 403
ILE HD12 H N N 404
ILE HD13 H N N 405
ILE HXT H N N 406
LEU N N N N 407
LEU CA C N S 408
LEU C C N N 409
LEU O O N N 410
LEU CB C N N 411
LEU CG C N N 412
LEU CD1 C N N 413
LEU CD2 C N N 414
LEU OXT O N N 415
LEU H H N N 416
LEU H2 H N N 417
LEU HA H N N 418
LEU HB2 H N N 419
LEU HB3 H N N 420
LEU HG H N N 421
LEU HD11 H N N 422
LEU HD12 H N N 423
LEU HD13 H N N 424
LEU HD21 H N N 425
LEU HD22 H N N 426
LEU HD23 H N N 427
LEU HXT H N N 428
LYS N N N N 429
LYS CA C N S 430
LYS C C N N 431
LYS O O N N 432
LYS CB C N N 433
LYS CG C N N 434
LYS CD C N N 435
LYS CE C N N 436
LYS NZ N N N 437
LYS OXT O N N 438
LYS H H N N 439
LYS H2 H N N 440
LYS HA H N N 441
LYS HB2 H N N 442
LYS HB3 H N N 443
LYS HG2 H N N 444
LYS HG3 H N N 445
LYS HD2 H N N 446
LYS HD3 H N N 447
LYS HE2 H N N 448
LYS HE3 H N N 449
LYS HZ1 H N N 450
LYS HZ2 H N N 451
LYS HZ3 H N N 452
LYS HXT H N N 453
MET N N N N 454
MET CA C N S 455
MET C C N N 456
MET O O N N 457
MET CB C N N 458
MET CG C N N 459
MET SD S N N 460
MET CE C N N 461
MET OXT O N N 462
MET H H N N 463
MET H2 H N N 464
MET HA H N N 465
MET HB2 H N N 466
MET HB3 H N N 467
MET HG2 H N N 468
MET HG3 H N N 469
MET HE1 H N N 470
MET HE2 H N N 471
MET HE3 H N N 472
MET HXT H N N 473
MN MN MN N N 474
NI NI NI N N 475
PHE N N N N 476
PHE CA C N S 477
PHE C C N N 478
PHE O O N N 479
PHE CB C N N 480
PHE CG C Y N 481
PHE CD1 C Y N 482
PHE CD2 C Y N 483
PHE CE1 C Y N 484
PHE CE2 C Y N 485
PHE CZ C Y N 486
PHE OXT O N N 487
PHE H H N N 488
PHE H2 H N N 489
PHE HA H N N 490
PHE HB2 H N N 491
PHE HB3 H N N 492
PHE HD1 H N N 493
PHE HD2 H N N 494
PHE HE1 H N N 495
PHE HE2 H N N 496
PHE HZ H N N 497
PHE HXT H N N 498
PRO N N N N 499
PRO CA C N S 500
PRO C C N N 501
PRO O O N N 502
PRO CB C N N 503
PRO CG C N N 504
PRO CD C N N 505
PRO OXT O N N 506
PRO H H N N 507
PRO HA H N N 508
PRO HB2 H N N 509
PRO HB3 H N N 510
PRO HG2 H N N 511
PRO HG3 H N N 512
PRO HD2 H N N 513
PRO HD3 H N N 514
PRO HXT H N N 515
SER N N N N 516
SER CA C N S 517
SER C C N N 518
SER O O N N 519
SER CB C N N 520
SER OG O N N 521
SER OXT O N N 522
SER H H N N 523
SER H2 H N N 524
SER HA H N N 525
SER HB2 H N N 526
SER HB3 H N N 527
SER HG H N N 528
SER HXT H N N 529
THR N N N N 530
THR CA C N S 531
THR C C N N 532
THR O O N N 533
THR CB C N R 534
THR OG1 O N N 535
THR CG2 C N N 536
THR OXT O N N 537
THR H H N N 538
THR H2 H N N 539
THR HA H N N 540
THR HB H N N 541
THR HG1 H N N 542
THR HG21 H N N 543
THR HG22 H N N 544
THR HG23 H N N 545
THR HXT H N N 546
TRP N N N N 547
TRP CA C N S 548
TRP C C N N 549
TRP O O N N 550
TRP CB C N N 551
TRP CG C Y N 552
TRP CD1 C Y N 553
TRP CD2 C Y N 554
TRP NE1 N Y N 555
TRP CE2 C Y N 556
TRP CE3 C Y N 557
TRP CZ2 C Y N 558
TRP CZ3 C Y N 559
TRP CH2 C Y N 560
TRP OXT O N N 561
TRP H H N N 562
TRP H2 H N N 563
TRP HA H N N 564
TRP HB2 H N N 565
TRP HB3 H N N 566
TRP HD1 H N N 567
TRP HE1 H N N 568
TRP HE3 H N N 569
TRP HZ2 H N N 570
TRP HZ3 H N N 571
TRP HH2 H N N 572
TRP HXT H N N 573
TYR N N N N 574
TYR CA C N S 575
TYR C C N N 576
TYR O O N N 577
TYR CB C N N 578
TYR CG C Y N 579
TYR CD1 C Y N 580
TYR CD2 C Y N 581
TYR CE1 C Y N 582
TYR CE2 C Y N 583
TYR CZ C Y N 584
TYR OH O N N 585
TYR OXT O N N 586
TYR H H N N 587
TYR H2 H N N 588
TYR HA H N N 589
TYR HB2 H N N 590
TYR HB3 H N N 591
TYR HD1 H N N 592
TYR HD2 H N N 593
TYR HE1 H N N 594
TYR HE2 H N N 595
TYR HH H N N 596
TYR HXT H N N 597
VAL N N N N 598
VAL CA C N S 599
VAL C C N N 600
VAL O O N N 601
VAL CB C N N 602
VAL CG1 C N N 603
VAL CG2 C N N 604
VAL OXT O N N 605
VAL H H N N 606
VAL H2 H N N 607
VAL HA H N N 608
VAL HB H N N 609
VAL HG11 H N N 610
VAL HG12 H N N 611
VAL HG13 H N N 612
VAL HG21 H N N 613
VAL HG22 H N N 614
VAL HG23 H N N 615
VAL HXT H N N 616
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
02I P "O5'" sing N N 1
02I P OP3 sing N N 2
02I N1 C6 sing Y N 3
02I C2 N1 doub Y N 4
02I N3 C2 sing Y N 5
02I N3 C4 doub Y N 6
02I C4 C5 sing Y N 7
02I C5 C6 doub Y N 8
02I C5 N7 sing Y N 9
02I C6 N6 sing N N 10
02I N6 H2N6 sing N N 11
02I C8 N7 doub Y N 12
02I C8 "C5'" sing N N 13
02I N9 C4 sing Y N 14
02I N9 C8 sing Y N 15
02I "C1'" N9 sing N N 16
02I "C1'" "C2'" sing N N 17
02I OP3 HOP3 sing N N 18
02I "C2'" "C3'" sing N N 19
02I "C2'" "H12'" sing N N 20
02I OP2 P sing N N 21
02I OP2 HOP2 sing N N 22
02I "C3'" "O3'" sing N N 23
02I "C3'" "H3'" sing N N 24
02I "O3'" "HO3'" sing N N 25
02I "C4'" "C3'" sing N N 26
02I "C4'" "C5'" sing N N 27
02I "O4'" "C1'" sing N N 28
02I "O4'" "C4'" sing N N 29
02I "C5'" "O5'" sing N N 30
02I H2 C2 sing N N 31
02I H1N6 N6 sing N N 32
02I "H1'" "C1'" sing N N 33
02I "H22'" "C2'" sing N N 34
02I "H4'" "C4'" sing N N 35
02I "H5'" "C5'" sing N N 36
02I P OP1 doub N N 37
ALA N CA sing N N 38
ALA N H sing N N 39
ALA N H2 sing N N 40
ALA CA C sing N N 41
ALA CA CB sing N N 42
ALA CA HA sing N N 43
ALA C O doub N N 44
ALA C OXT sing N N 45
ALA CB HB1 sing N N 46
ALA CB HB2 sing N N 47
ALA CB HB3 sing N N 48
ALA OXT HXT sing N N 49
ARG N CA sing N N 50
ARG N H sing N N 51
ARG N H2 sing N N 52
ARG CA C sing N N 53
ARG CA CB sing N N 54
ARG CA HA sing N N 55
ARG C O doub N N 56
ARG C OXT sing N N 57
ARG CB CG sing N N 58
ARG CB HB2 sing N N 59
ARG CB HB3 sing N N 60
ARG CG CD sing N N 61
ARG CG HG2 sing N N 62
ARG CG HG3 sing N N 63
ARG CD NE sing N N 64
ARG CD HD2 sing N N 65
ARG CD HD3 sing N N 66
ARG NE CZ sing N N 67
ARG NE HE sing N N 68
ARG CZ NH1 sing N N 69
ARG CZ NH2 doub N N 70
ARG NH1 HH11 sing N N 71
ARG NH1 HH12 sing N N 72
ARG NH2 HH21 sing N N 73
ARG NH2 HH22 sing N N 74
ARG OXT HXT sing N N 75
ASN N CA sing N N 76
ASN N H sing N N 77
ASN N H2 sing N N 78
ASN CA C sing N N 79
ASN CA CB sing N N 80
ASN CA HA sing N N 81
ASN C O doub N N 82
ASN C OXT sing N N 83
ASN CB CG sing N N 84
ASN CB HB2 sing N N 85
ASN CB HB3 sing N N 86
ASN CG OD1 doub N N 87
ASN CG ND2 sing N N 88
ASN ND2 HD21 sing N N 89
ASN ND2 HD22 sing N N 90
ASN OXT HXT sing N N 91
ASP N CA sing N N 92
ASP N H sing N N 93
ASP N H2 sing N N 94
ASP CA C sing N N 95
ASP CA CB sing N N 96
ASP CA HA sing N N 97
ASP C O doub N N 98
ASP C OXT sing N N 99
ASP CB CG sing N N 100
ASP CB HB2 sing N N 101
ASP CB HB3 sing N N 102
ASP CG OD1 doub N N 103
ASP CG OD2 sing N N 104
ASP OD2 HD2 sing N N 105
ASP OXT HXT sing N N 106
CYS N CA sing N N 107
CYS N H sing N N 108
CYS N H2 sing N N 109
CYS CA C sing N N 110
CYS CA CB sing N N 111
CYS CA HA sing N N 112
CYS C O doub N N 113
CYS C OXT sing N N 114
CYS CB SG sing N N 115
CYS CB HB2 sing N N 116
CYS CB HB3 sing N N 117
CYS SG HG sing N N 118
CYS OXT HXT sing N N 119
DA OP3 P sing N N 120
DA OP3 HOP3 sing N N 121
DA P OP1 doub N N 122
DA P OP2 sing N N 123
DA P "O5'" sing N N 124
DA OP2 HOP2 sing N N 125
DA "O5'" "C5'" sing N N 126
DA "C5'" "C4'" sing N N 127
DA "C5'" "H5'" sing N N 128
DA "C5'" "H5''" sing N N 129
DA "C4'" "O4'" sing N N 130
DA "C4'" "C3'" sing N N 131
DA "C4'" "H4'" sing N N 132
DA "O4'" "C1'" sing N N 133
DA "C3'" "O3'" sing N N 134
DA "C3'" "C2'" sing N N 135
DA "C3'" "H3'" sing N N 136
DA "O3'" "HO3'" sing N N 137
DA "C2'" "C1'" sing N N 138
DA "C2'" "H2'" sing N N 139
DA "C2'" "H2''" sing N N 140
DA "C1'" N9 sing N N 141
DA "C1'" "H1'" sing N N 142
DA N9 C8 sing Y N 143
DA N9 C4 sing Y N 144
DA C8 N7 doub Y N 145
DA C8 H8 sing N N 146
DA N7 C5 sing Y N 147
DA C5 C6 sing Y N 148
DA C5 C4 doub Y N 149
DA C6 N6 sing N N 150
DA C6 N1 doub Y N 151
DA N6 H61 sing N N 152
DA N6 H62 sing N N 153
DA N1 C2 sing Y N 154
DA C2 N3 doub Y N 155
DA C2 H2 sing N N 156
DA N3 C4 sing Y N 157
DC OP3 P sing N N 158
DC OP3 HOP3 sing N N 159
DC P OP1 doub N N 160
DC P OP2 sing N N 161
DC P "O5'" sing N N 162
DC OP2 HOP2 sing N N 163
DC "O5'" "C5'" sing N N 164
DC "C5'" "C4'" sing N N 165
DC "C5'" "H5'" sing N N 166
DC "C5'" "H5''" sing N N 167
DC "C4'" "O4'" sing N N 168
DC "C4'" "C3'" sing N N 169
DC "C4'" "H4'" sing N N 170
DC "O4'" "C1'" sing N N 171
DC "C3'" "O3'" sing N N 172
DC "C3'" "C2'" sing N N 173
DC "C3'" "H3'" sing N N 174
DC "O3'" "HO3'" sing N N 175
DC "C2'" "C1'" sing N N 176
DC "C2'" "H2'" sing N N 177
DC "C2'" "H2''" sing N N 178
DC "C1'" N1 sing N N 179
DC "C1'" "H1'" sing N N 180
DC N1 C2 sing N N 181
DC N1 C6 sing N N 182
DC C2 O2 doub N N 183
DC C2 N3 sing N N 184
DC N3 C4 doub N N 185
DC C4 N4 sing N N 186
DC C4 C5 sing N N 187
DC N4 H41 sing N N 188
DC N4 H42 sing N N 189
DC C5 C6 doub N N 190
DC C5 H5 sing N N 191
DC C6 H6 sing N N 192
DG OP3 P sing N N 193
DG OP3 HOP3 sing N N 194
DG P OP1 doub N N 195
DG P OP2 sing N N 196
DG P "O5'" sing N N 197
DG OP2 HOP2 sing N N 198
DG "O5'" "C5'" sing N N 199
DG "C5'" "C4'" sing N N 200
DG "C5'" "H5'" sing N N 201
DG "C5'" "H5''" sing N N 202
DG "C4'" "O4'" sing N N 203
DG "C4'" "C3'" sing N N 204
DG "C4'" "H4'" sing N N 205
DG "O4'" "C1'" sing N N 206
DG "C3'" "O3'" sing N N 207
DG "C3'" "C2'" sing N N 208
DG "C3'" "H3'" sing N N 209
DG "O3'" "HO3'" sing N N 210
DG "C2'" "C1'" sing N N 211
DG "C2'" "H2'" sing N N 212
DG "C2'" "H2''" sing N N 213
DG "C1'" N9 sing N N 214
DG "C1'" "H1'" sing N N 215
DG N9 C8 sing Y N 216
DG N9 C4 sing Y N 217
DG C8 N7 doub Y N 218
DG C8 H8 sing N N 219
DG N7 C5 sing Y N 220
DG C5 C6 sing N N 221
DG C5 C4 doub Y N 222
DG C6 O6 doub N N 223
DG C6 N1 sing N N 224
DG N1 C2 sing N N 225
DG N1 H1 sing N N 226
DG C2 N2 sing N N 227
DG C2 N3 doub N N 228
DG N2 H21 sing N N 229
DG N2 H22 sing N N 230
DG N3 C4 sing N N 231
DT OP3 P sing N N 232
DT OP3 HOP3 sing N N 233
DT P OP1 doub N N 234
DT P OP2 sing N N 235
DT P "O5'" sing N N 236
DT OP2 HOP2 sing N N 237
DT "O5'" "C5'" sing N N 238
DT "C5'" "C4'" sing N N 239
DT "C5'" "H5'" sing N N 240
DT "C5'" "H5''" sing N N 241
DT "C4'" "O4'" sing N N 242
DT "C4'" "C3'" sing N N 243
DT "C4'" "H4'" sing N N 244
DT "O4'" "C1'" sing N N 245
DT "C3'" "O3'" sing N N 246
DT "C3'" "C2'" sing N N 247
DT "C3'" "H3'" sing N N 248
DT "O3'" "HO3'" sing N N 249
DT "C2'" "C1'" sing N N 250
DT "C2'" "H2'" sing N N 251
DT "C2'" "H2''" sing N N 252
DT "C1'" N1 sing N N 253
DT "C1'" "H1'" sing N N 254
DT N1 C2 sing N N 255
DT N1 C6 sing N N 256
DT C2 O2 doub N N 257
DT C2 N3 sing N N 258
DT N3 C4 sing N N 259
DT N3 H3 sing N N 260
DT C4 O4 doub N N 261
DT C4 C5 sing N N 262
DT C5 C7 sing N N 263
DT C5 C6 doub N N 264
DT C7 H71 sing N N 265
DT C7 H72 sing N N 266
DT C7 H73 sing N N 267
DT C6 H6 sing N N 268
DZ4 C2 N1 doub Y N 269
DZ4 N1 C6 sing Y N 270
DZ4 N3 C2 sing Y N 271
DZ4 C2 H2 sing N N 272
DZ4 N3 C4 doub Y N 273
DZ4 N9 C4 sing Y N 274
DZ4 C4 C5 sing Y N 275
DZ4 C5 N7 sing Y N 276
DZ4 C5 C6 doub Y N 277
DZ4 C6 N6 sing N N 278
DZ4 N6 HN6 sing N N 279
DZ4 N6 HN6A sing N N 280
DZ4 C8 N7 doub Y N 281
DZ4 N9 C8 sing Y N 282
DZ4 C8 H8 sing N N 283
DZ4 "C1'" N9 sing N N 284
DZ4 "O5'" PA sing N N 285
DZ4 O1A PA doub N N 286
DZ4 PA O2A sing N N 287
DZ4 PA N3A sing N N 288
DZ4 O1B PB doub N N 289
DZ4 N3A PB sing N N 290
DZ4 PB O2B sing N N 291
DZ4 PB O3B sing N N 292
DZ4 O1G PG doub N N 293
DZ4 PG O3B sing N N 294
DZ4 PG O2G sing N N 295
DZ4 PG O3G sing N N 296
DZ4 "O4'" "C1'" sing N N 297
DZ4 "C1'" "C2'" sing N N 298
DZ4 "C1'" "H1'" sing N N 299
DZ4 "C3'" "C2'" sing N N 300
DZ4 "C2'" "H2'" sing N N 301
DZ4 "C2'" "H2'A" sing N N 302
DZ4 O2A HO2A sing N N 303
DZ4 O2B HO2B sing N N 304
DZ4 O2G HO2G sing N N 305
DZ4 "C4'" "C3'" sing N N 306
DZ4 "C3'" "O3'" sing N N 307
DZ4 "C3'" "H3'" sing N N 308
DZ4 "O3'" "HO3'" sing N N 309
DZ4 N3A HN3A sing N N 310
DZ4 O3G HO3G sing N N 311
DZ4 "O4'" "C4'" sing N N 312
DZ4 "C4'" "C5'" sing N N 313
DZ4 "C4'" "H4'" sing N N 314
DZ4 "C5'" "O5'" sing N N 315
DZ4 "C5'" "H5'" sing N N 316
DZ4 "C5'" "H5'A" sing N N 317
GLN N CA sing N N 318
GLN N H sing N N 319
GLN N H2 sing N N 320
GLN CA C sing N N 321
GLN CA CB sing N N 322
GLN CA HA sing N N 323
GLN C O doub N N 324
GLN C OXT sing N N 325
GLN CB CG sing N N 326
GLN CB HB2 sing N N 327
GLN CB HB3 sing N N 328
GLN CG CD sing N N 329
GLN CG HG2 sing N N 330
GLN CG HG3 sing N N 331
GLN CD OE1 doub N N 332
GLN CD NE2 sing N N 333
GLN NE2 HE21 sing N N 334
GLN NE2 HE22 sing N N 335
GLN OXT HXT sing N N 336
GLU N CA sing N N 337
GLU N H sing N N 338
GLU N H2 sing N N 339
GLU CA C sing N N 340
GLU CA CB sing N N 341
GLU CA HA sing N N 342
GLU C O doub N N 343
GLU C OXT sing N N 344
GLU CB CG sing N N 345
GLU CB HB2 sing N N 346
GLU CB HB3 sing N N 347
GLU CG CD sing N N 348
GLU CG HG2 sing N N 349
GLU CG HG3 sing N N 350
GLU CD OE1 doub N N 351
GLU CD OE2 sing N N 352
GLU OE2 HE2 sing N N 353
GLU OXT HXT sing N N 354
GLY N CA sing N N 355
GLY N H sing N N 356
GLY N H2 sing N N 357
GLY CA C sing N N 358
GLY CA HA2 sing N N 359
GLY CA HA3 sing N N 360
GLY C O doub N N 361
GLY C OXT sing N N 362
GLY OXT HXT sing N N 363
HIS N CA sing N N 364
HIS N H sing N N 365
HIS N H2 sing N N 366
HIS CA C sing N N 367
HIS CA CB sing N N 368
HIS CA HA sing N N 369
HIS C O doub N N 370
HIS C OXT sing N N 371
HIS CB CG sing N N 372
HIS CB HB2 sing N N 373
HIS CB HB3 sing N N 374
HIS CG ND1 sing Y N 375
HIS CG CD2 doub Y N 376
HIS ND1 CE1 doub Y N 377
HIS ND1 HD1 sing N N 378
HIS CD2 NE2 sing Y N 379
HIS CD2 HD2 sing N N 380
HIS CE1 NE2 sing Y N 381
HIS CE1 HE1 sing N N 382
HIS NE2 HE2 sing N N 383
HIS OXT HXT sing N N 384
HOH O H1 sing N N 385
HOH O H2 sing N N 386
ILE N CA sing N N 387
ILE N H sing N N 388
ILE N H2 sing N N 389
ILE CA C sing N N 390
ILE CA CB sing N N 391
ILE CA HA sing N N 392
ILE C O doub N N 393
ILE C OXT sing N N 394
ILE CB CG1 sing N N 395
ILE CB CG2 sing N N 396
ILE CB HB sing N N 397
ILE CG1 CD1 sing N N 398
ILE CG1 HG12 sing N N 399
ILE CG1 HG13 sing N N 400
ILE CG2 HG21 sing N N 401
ILE CG2 HG22 sing N N 402
ILE CG2 HG23 sing N N 403
ILE CD1 HD11 sing N N 404
ILE CD1 HD12 sing N N 405
ILE CD1 HD13 sing N N 406
ILE OXT HXT sing N N 407
LEU N CA sing N N 408
LEU N H sing N N 409
LEU N H2 sing N N 410
LEU CA C sing N N 411
LEU CA CB sing N N 412
LEU CA HA sing N N 413
LEU C O doub N N 414
LEU C OXT sing N N 415
LEU CB CG sing N N 416
LEU CB HB2 sing N N 417
LEU CB HB3 sing N N 418
LEU CG CD1 sing N N 419
LEU CG CD2 sing N N 420
LEU CG HG sing N N 421
LEU CD1 HD11 sing N N 422
LEU CD1 HD12 sing N N 423
LEU CD1 HD13 sing N N 424
LEU CD2 HD21 sing N N 425
LEU CD2 HD22 sing N N 426
LEU CD2 HD23 sing N N 427
LEU OXT HXT sing N N 428
LYS N CA sing N N 429
LYS N H sing N N 430
LYS N H2 sing N N 431
LYS CA C sing N N 432
LYS CA CB sing N N 433
LYS CA HA sing N N 434
LYS C O doub N N 435
LYS C OXT sing N N 436
LYS CB CG sing N N 437
LYS CB HB2 sing N N 438
LYS CB HB3 sing N N 439
LYS CG CD sing N N 440
LYS CG HG2 sing N N 441
LYS CG HG3 sing N N 442
LYS CD CE sing N N 443
LYS CD HD2 sing N N 444
LYS CD HD3 sing N N 445
LYS CE NZ sing N N 446
LYS CE HE2 sing N N 447
LYS CE HE3 sing N N 448
LYS NZ HZ1 sing N N 449
LYS NZ HZ2 sing N N 450
LYS NZ HZ3 sing N N 451
LYS OXT HXT sing N N 452
MET N CA sing N N 453
MET N H sing N N 454
MET N H2 sing N N 455
MET CA C sing N N 456
MET CA CB sing N N 457
MET CA HA sing N N 458
MET C O doub N N 459
MET C OXT sing N N 460
MET CB CG sing N N 461
MET CB HB2 sing N N 462
MET CB HB3 sing N N 463
MET CG SD sing N N 464
MET CG HG2 sing N N 465
MET CG HG3 sing N N 466
MET SD CE sing N N 467
MET CE HE1 sing N N 468
MET CE HE2 sing N N 469
MET CE HE3 sing N N 470
MET OXT HXT sing N N 471
PHE N CA sing N N 472
PHE N H sing N N 473
PHE N H2 sing N N 474
PHE CA C sing N N 475
PHE CA CB sing N N 476
PHE CA HA sing N N 477
PHE C O doub N N 478
PHE C OXT sing N N 479
PHE CB CG sing N N 480
PHE CB HB2 sing N N 481
PHE CB HB3 sing N N 482
PHE CG CD1 doub Y N 483
PHE CG CD2 sing Y N 484
PHE CD1 CE1 sing Y N 485
PHE CD1 HD1 sing N N 486
PHE CD2 CE2 doub Y N 487
PHE CD2 HD2 sing N N 488
PHE CE1 CZ doub Y N 489
PHE CE1 HE1 sing N N 490
PHE CE2 CZ sing Y N 491
PHE CE2 HE2 sing N N 492
PHE CZ HZ sing N N 493
PHE OXT HXT sing N N 494
PRO N CA sing N N 495
PRO N CD sing N N 496
PRO N H sing N N 497
PRO CA C sing N N 498
PRO CA CB sing N N 499
PRO CA HA sing N N 500
PRO C O doub N N 501
PRO C OXT sing N N 502
PRO CB CG sing N N 503
PRO CB HB2 sing N N 504
PRO CB HB3 sing N N 505
PRO CG CD sing N N 506
PRO CG HG2 sing N N 507
PRO CG HG3 sing N N 508
PRO CD HD2 sing N N 509
PRO CD HD3 sing N N 510
PRO OXT HXT sing N N 511
SER N CA sing N N 512
SER N H sing N N 513
SER N H2 sing N N 514
SER CA C sing N N 515
SER CA CB sing N N 516
SER CA HA sing N N 517
SER C O doub N N 518
SER C OXT sing N N 519
SER CB OG sing N N 520
SER CB HB2 sing N N 521
SER CB HB3 sing N N 522
SER OG HG sing N N 523
SER OXT HXT sing N N 524
THR N CA sing N N 525
THR N H sing N N 526
THR N H2 sing N N 527
THR CA C sing N N 528
THR CA CB sing N N 529
THR CA HA sing N N 530
THR C O doub N N 531
THR C OXT sing N N 532
THR CB OG1 sing N N 533
THR CB CG2 sing N N 534
THR CB HB sing N N 535
THR OG1 HG1 sing N N 536
THR CG2 HG21 sing N N 537
THR CG2 HG22 sing N N 538
THR CG2 HG23 sing N N 539
THR OXT HXT sing N N 540
TRP N CA sing N N 541
TRP N H sing N N 542
TRP N H2 sing N N 543
TRP CA C sing N N 544
TRP CA CB sing N N 545
TRP CA HA sing N N 546
TRP C O doub N N 547
TRP C OXT sing N N 548
TRP CB CG sing N N 549
TRP CB HB2 sing N N 550
TRP CB HB3 sing N N 551
TRP CG CD1 doub Y N 552
TRP CG CD2 sing Y N 553
TRP CD1 NE1 sing Y N 554
TRP CD1 HD1 sing N N 555
TRP CD2 CE2 doub Y N 556
TRP CD2 CE3 sing Y N 557
TRP NE1 CE2 sing Y N 558
TRP NE1 HE1 sing N N 559
TRP CE2 CZ2 sing Y N 560
TRP CE3 CZ3 doub Y N 561
TRP CE3 HE3 sing N N 562
TRP CZ2 CH2 doub Y N 563
TRP CZ2 HZ2 sing N N 564
TRP CZ3 CH2 sing Y N 565
TRP CZ3 HZ3 sing N N 566
TRP CH2 HH2 sing N N 567
TRP OXT HXT sing N N 568
TYR N CA sing N N 569
TYR N H sing N N 570
TYR N H2 sing N N 571
TYR CA C sing N N 572
TYR CA CB sing N N 573
TYR CA HA sing N N 574
TYR C O doub N N 575
TYR C OXT sing N N 576
TYR CB CG sing N N 577
TYR CB HB2 sing N N 578
TYR CB HB3 sing N N 579
TYR CG CD1 doub Y N 580
TYR CG CD2 sing Y N 581
TYR CD1 CE1 sing Y N 582
TYR CD1 HD1 sing N N 583
TYR CD2 CE2 doub Y N 584
TYR CD2 HD2 sing N N 585
TYR CE1 CZ doub Y N 586
TYR CE1 HE1 sing N N 587
TYR CE2 CZ sing Y N 588
TYR CE2 HE2 sing N N 589
TYR CZ OH sing N N 590
TYR OH HH sing N N 591
TYR OXT HXT sing N N 592
VAL N CA sing N N 593
VAL N H sing N N 594
VAL N H2 sing N N 595
VAL CA C sing N N 596
VAL CA CB sing N N 597
VAL CA HA sing N N 598
VAL C O doub N N 599
VAL C OXT sing N N 600
VAL CB CG1 sing N N 601
VAL CB CG2 sing N N 602
VAL CB HB sing N N 603
VAL CG1 HG11 sing N N 604
VAL CG1 HG12 sing N N 605
VAL CG1 HG13 sing N N 606
VAL CG2 HG21 sing N N 607
VAL CG2 HG22 sing N N 608
VAL CG2 HG23 sing N N 609
VAL OXT HXT sing N N 610
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
6M7V 'double helix'
6M7V 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 B DG 1 1_555 C DC 8 1_555 0.052 -0.245 -1.011 -31.877 -2.670 2.644 1 P_DG2:DC11_T P 2 ? T 11 ? 19 1
1 B DT 2 1_555 C DA 7 1_555 -0.696 0.001 -0.432 -15.665 -11.367 -3.678 2 P_DT3:DA10_T P 3 ? T 10 ? 20 1
1 B DG 3 1_555 C DC 6 1_555 0.322 -0.055 -0.064 -16.738 -1.644 2.763 3 P_DG4:DC9_T P 4 ? T 9 ? 19 1
1 B DT 4 1_555 C DA 5 1_555 0.732 -0.033 0.028 -5.499 1.105 3.673 4 P_DT5:DA8_T P 5 ? T 8 ? 20 1
1 B DG 5 1_555 C DC 4 1_555 -0.308 -0.381 0.375 16.070 9.348 -1.427 5 P_DG6:DC7_T P 6 ? T 7 ? 19 1
1 B DA 6 1_555 C DT 3 1_555 0.204 -0.070 0.074 20.700 -4.136 -0.071 6 P_DA7:DT6_T P 7 ? T 6 ? 20 1
1 B DG 7 1_555 C DC 2 1_555 1.116 -0.104 0.182 19.129 -11.708 9.736 7 P_DG8:DC5_T P 8 ? T 5 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 B DG 1 1_555 C DC 8 1_555 B DT 2 1_555 C DA 7 1_555 -1.192 0.003 2.998 -5.135 -3.960 32.421 0.638 1.274 3.123 -7.006 9.083
33.046 1 PP_DG2DT3:DA10DC11_TT P 2 ? T 11 ? P 3 ? T 10 ?
1 B DT 2 1_555 C DA 7 1_555 B DG 3 1_555 C DC 6 1_555 0.743 0.660 3.366 -1.136 1.023 40.838 0.830 -1.192 3.360 1.466 1.628
40.865 2 PP_DT3DG4:DC9DA10_TT P 3 ? T 10 ? P 4 ? T 9 ?
1 B DG 3 1_555 C DC 6 1_555 B DT 4 1_555 C DA 5 1_555 -0.103 -0.187 3.187 -1.731 0.934 32.027 -0.501 -0.116 3.181 1.691 3.133
32.086 3 PP_DG4DT5:DA8DC9_TT P 4 ? T 9 ? P 5 ? T 8 ?
1 B DT 4 1_555 C DA 5 1_555 B DG 5 1_555 C DC 4 1_555 -0.107 -0.433 2.613 -3.819 6.555 25.390 -2.309 -0.561 2.416 14.507 8.452
26.481 4 PP_DT5DG6:DC7DA8_TT P 5 ? T 8 ? P 6 ? T 7 ?
1 B DG 5 1_555 C DC 4 1_555 B DA 6 1_555 C DT 3 1_555 -0.712 -0.648 3.346 0.299 -0.302 33.369 -1.076 1.290 3.346 -0.527 -0.520
33.371 5 PP_DG6DA7:DT6DC7_TT P 6 ? T 7 ? P 7 ? T 6 ?
1 B DA 6 1_555 C DT 3 1_555 B DG 7 1_555 C DC 2 1_555 0.815 -0.445 3.737 1.731 3.167 31.454 -1.483 -1.130 3.713 5.819 -3.179
31.656 6 PP_DA7DG8:DC5DT6_TT P 7 ? T 6 ? P 8 ? T 5 ?
#
_pdbx_audit_support.funding_organization
'National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)'
_pdbx_audit_support.country 'United States'
_pdbx_audit_support.grant_number DK036146
_pdbx_audit_support.ordinal 1
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
4 'NICKEL (II) ION' NI
5 "2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine" DZ4
6 'MANGANESE (II) ION' MN
7 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 3SI8
_pdbx_initial_refinement_model.details ?
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support none
_pdbx_struct_assembly_auth_evidence.details ?
#