HEADER OXIDOREDUCTASE 24-AUG-18 6M9R TITLE CRYSTAL STRUCTURE OF SZNF FROM STREPTOMYCES ACHROMOGENES VAR. TITLE 2 STREPTOZOTICUS NRRL 2697 WITH A BOUND N(DELTA)-HYDROXY-N(OMEGA)- TITLE 3 METHYL-L-ARGININE INTERMEDIATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SZNF; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.-.-.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES ACHROMOGENES SUBSP. SOURCE 3 STREPTOZOTICUS; SOURCE 4 ORGANISM_TAXID: 285532; SOURCE 5 STRAIN: NRRL 2697; SOURCE 6 GENE: SZNF; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-21B KEYWDS NON-HEME IRON-DEPENDENT, CUPIN DOMAIN, HELIX BUNDLE, MONOOXYGENASE, KEYWDS 2 N-NITROSATION, L-ARGININE DERIVATIVE, METAL-BOUND, LIGAND-BOUND, KEYWDS 3 ANAEROBIC, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR R.ROHAC,A.J.MITCHELL,A.K.BOAL REVDAT 5 11-OCT-23 6M9R 1 LINK REVDAT 4 01-JAN-20 6M9R 1 REMARK REVDAT 3 13-NOV-19 6M9R 1 JRNL REVDAT 2 13-FEB-19 6M9R 1 JRNL REVDAT 1 06-FEB-19 6M9R 0 JRNL AUTH T.L.NG,R.ROHAC,A.J.MITCHELL,A.K.BOAL,E.P.BALSKUS JRNL TITL AN N-NITROSATING METALLOENZYME CONSTRUCTS THE PHARMACOPHORE JRNL TITL 2 OF STREPTOZOTOCIN. JRNL REF NATURE V. 566 94 2019 JRNL REFN ESSN 1476-4687 JRNL PMID 30728519 JRNL DOI 10.1038/S41586-019-0894-Z REMARK 2 REMARK 2 RESOLUTION. 1.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 100867 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5310 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.69 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.73 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7365 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.99 REMARK 3 BIN R VALUE (WORKING SET) : 0.2750 REMARK 3 BIN FREE R VALUE SET COUNT : 388 REMARK 3 BIN FREE R VALUE : 0.2790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7303 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 979 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.11000 REMARK 3 B22 (A**2) : 0.79000 REMARK 3 B33 (A**2) : -0.90000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.104 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.095 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.233 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7741 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 7127 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10538 ; 1.172 ; 1.949 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16342 ; 0.929 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 946 ; 5.051 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 400 ;31.016 ;23.150 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1231 ;12.427 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 65 ;17.628 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1115 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8951 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1930 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3748 ; 0.579 ; 1.497 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3748 ; 0.578 ; 1.497 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4706 ; 0.931 ; 2.237 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4707 ; 0.931 ; 2.237 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3993 ; 0.888 ; 1.607 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3994 ; 0.888 ; 1.607 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5833 ; 1.445 ; 2.372 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 35202 ; 4.736 ;15.239 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 34054 ; 4.313 ;14.414 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 4 471 B 4 471 27350 0.09 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 22 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 113 REMARK 3 ORIGIN FOR THE GROUP (A): 5.0070 15.9207 43.8124 REMARK 3 T TENSOR REMARK 3 T11: 0.0947 T22: 0.0881 REMARK 3 T33: 0.1202 T12: 0.0372 REMARK 3 T13: 0.0223 T23: 0.0210 REMARK 3 L TENSOR REMARK 3 L11: 1.4355 L22: 0.4479 REMARK 3 L33: 2.3459 L12: -0.0569 REMARK 3 L13: -1.4624 L23: 0.2375 REMARK 3 S TENSOR REMARK 3 S11: 0.1366 S12: 0.0352 S13: 0.1281 REMARK 3 S21: -0.0061 S22: 0.0278 S23: 0.0004 REMARK 3 S31: -0.2957 S32: -0.0797 S33: -0.1644 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 114 A 150 REMARK 3 ORIGIN FOR THE GROUP (A): 23.7562 6.6839 55.5301 REMARK 3 T TENSOR REMARK 3 T11: 0.0581 T22: 0.4621 REMARK 3 T33: 0.0843 T12: 0.1026 REMARK 3 T13: -0.0069 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 1.6455 L22: 1.2233 REMARK 3 L33: 3.2526 L12: -0.3816 REMARK 3 L13: -1.4037 L23: 0.0287 REMARK 3 S TENSOR REMARK 3 S11: -0.1223 S12: -0.7423 S13: -0.0760 REMARK 3 S21: 0.1491 S22: 0.0983 S23: -0.1653 REMARK 3 S31: 0.3032 S32: 1.1068 S33: 0.0240 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 157 A 188 REMARK 3 ORIGIN FOR THE GROUP (A): -1.0016 -4.1414 60.4002 REMARK 3 T TENSOR REMARK 3 T11: 0.1970 T22: 0.0898 REMARK 3 T33: 0.1294 T12: 0.0709 REMARK 3 T13: 0.0882 T23: 0.0351 REMARK 3 L TENSOR REMARK 3 L11: 2.3539 L22: 1.8982 REMARK 3 L33: 5.0933 L12: -0.2128 REMARK 3 L13: -1.9328 L23: -0.6336 REMARK 3 S TENSOR REMARK 3 S11: -0.4122 S12: -0.2095 S13: -0.2285 REMARK 3 S21: 0.3068 S22: 0.0465 S23: -0.0283 REMARK 3 S31: 0.6287 S32: 0.2779 S33: 0.3657 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 189 A 207 REMARK 3 ORIGIN FOR THE GROUP (A): 21.0170 -4.1531 39.0616 REMARK 3 T TENSOR REMARK 3 T11: 0.1326 T22: 0.1248 REMARK 3 T33: 0.1144 T12: 0.0893 REMARK 3 T13: 0.0562 T23: 0.0584 REMARK 3 L TENSOR REMARK 3 L11: 6.5639 L22: 1.7761 REMARK 3 L33: 3.2023 L12: -1.2472 REMARK 3 L13: -2.7684 L23: 0.5683 REMARK 3 S TENSOR REMARK 3 S11: -0.4480 S12: -0.4835 S13: -0.4012 REMARK 3 S21: 0.2400 S22: 0.1693 S23: 0.0842 REMARK 3 S31: 0.5726 S32: 0.3292 S33: 0.2787 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 208 A 221 REMARK 3 ORIGIN FOR THE GROUP (A): 15.0963 -10.2794 40.6311 REMARK 3 T TENSOR REMARK 3 T11: 0.2518 T22: 0.0549 REMARK 3 T33: 0.2802 T12: 0.0601 REMARK 3 T13: 0.1069 T23: 0.0523 REMARK 3 L TENSOR REMARK 3 L11: 21.9587 L22: 1.9154 REMARK 3 L33: 5.6077 L12: 5.6287 REMARK 3 L13: 4.3515 L23: 1.0849 REMARK 3 S TENSOR REMARK 3 S11: -0.2524 S12: -0.5538 S13: -0.1631 REMARK 3 S21: 0.0043 S22: -0.0642 S23: 0.2993 REMARK 3 S31: 0.3482 S32: -0.2591 S33: 0.3166 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 222 A 249 REMARK 3 ORIGIN FOR THE GROUP (A): -2.8087 -3.8960 47.1350 REMARK 3 T TENSOR REMARK 3 T11: 0.1704 T22: 0.1123 REMARK 3 T33: 0.0976 T12: -0.0480 REMARK 3 T13: 0.1025 T23: -0.0224 REMARK 3 L TENSOR REMARK 3 L11: 1.6634 L22: 3.1594 REMARK 3 L33: 3.9293 L12: -0.3313 REMARK 3 L13: -0.4446 L23: -0.1324 REMARK 3 S TENSOR REMARK 3 S11: -0.2483 S12: 0.2767 S13: -0.3097 REMARK 3 S21: -0.2378 S22: -0.0470 S23: -0.0284 REMARK 3 S31: 0.6985 S32: -0.2490 S33: 0.2953 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 250 A 284 REMARK 3 ORIGIN FOR THE GROUP (A): 17.4694 1.3644 50.7566 REMARK 3 T TENSOR REMARK 3 T11: 0.0877 T22: 0.2295 REMARK 3 T33: 0.0979 T12: 0.0993 REMARK 3 T13: 0.0241 T23: 0.0513 REMARK 3 L TENSOR REMARK 3 L11: 2.9527 L22: 0.1027 REMARK 3 L33: 2.7643 L12: -0.2162 REMARK 3 L13: -2.4268 L23: 0.2390 REMARK 3 S TENSOR REMARK 3 S11: -0.2790 S12: -0.3854 S13: -0.2215 REMARK 3 S21: 0.0822 S22: 0.1027 S23: 0.0187 REMARK 3 S31: 0.3793 S32: 0.5146 S33: 0.1763 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 285 A 317 REMARK 3 ORIGIN FOR THE GROUP (A): 3.7295 -15.4990 56.6690 REMARK 3 T TENSOR REMARK 3 T11: 0.4230 T22: 0.0498 REMARK 3 T33: 0.1841 T12: 0.1268 REMARK 3 T13: 0.2622 T23: 0.0777 REMARK 3 L TENSOR REMARK 3 L11: 6.6058 L22: 2.7318 REMARK 3 L33: 4.5843 L12: -2.0855 REMARK 3 L13: -1.2417 L23: -0.3449 REMARK 3 S TENSOR REMARK 3 S11: -0.5864 S12: 0.0713 S13: -0.4944 REMARK 3 S21: 0.1736 S22: -0.0630 S23: 0.0574 REMARK 3 S31: 1.1998 S32: 0.3650 S33: 0.6494 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 318 A 346 REMARK 3 ORIGIN FOR THE GROUP (A): 30.1977 -5.3750 50.6694 REMARK 3 T TENSOR REMARK 3 T11: 0.1769 T22: 0.5858 REMARK 3 T33: 0.1204 T12: 0.2957 REMARK 3 T13: 0.0746 T23: 0.1604 REMARK 3 L TENSOR REMARK 3 L11: 3.8597 L22: 1.7749 REMARK 3 L33: 6.3933 L12: -0.3085 REMARK 3 L13: -1.7862 L23: 0.3771 REMARK 3 S TENSOR REMARK 3 S11: -0.5023 S12: -0.7732 S13: -0.4565 REMARK 3 S21: 0.1243 S22: 0.2527 S23: 0.0141 REMARK 3 S31: 0.9087 S32: 1.2083 S33: 0.2496 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 347 A 390 REMARK 3 ORIGIN FOR THE GROUP (A): -1.6072 11.4656 69.5028 REMARK 3 T TENSOR REMARK 3 T11: 0.1096 T22: 0.1206 REMARK 3 T33: 0.0656 T12: 0.0629 REMARK 3 T13: 0.0084 T23: 0.0173 REMARK 3 L TENSOR REMARK 3 L11: 3.1672 L22: 0.8286 REMARK 3 L33: 3.7052 L12: -0.7801 REMARK 3 L13: -1.9811 L23: 0.3959 REMARK 3 S TENSOR REMARK 3 S11: -0.1248 S12: -0.3363 S13: 0.1141 REMARK 3 S21: 0.1803 S22: 0.1021 S23: 0.0081 REMARK 3 S31: -0.1090 S32: 0.2532 S33: 0.0228 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 391 A 471 REMARK 3 ORIGIN FOR THE GROUP (A): -10.7277 19.0175 63.5627 REMARK 3 T TENSOR REMARK 3 T11: 0.1296 T22: 0.1246 REMARK 3 T33: 0.1051 T12: 0.0957 REMARK 3 T13: 0.0456 T23: 0.0298 REMARK 3 L TENSOR REMARK 3 L11: 1.5941 L22: 1.4111 REMARK 3 L33: 2.9093 L12: -0.4450 REMARK 3 L13: -0.8057 L23: 0.3773 REMARK 3 S TENSOR REMARK 3 S11: 0.0826 S12: 0.0640 S13: 0.1468 REMARK 3 S21: 0.0719 S22: 0.0004 S23: 0.0650 REMARK 3 S31: -0.4602 S32: -0.2869 S33: -0.0830 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 113 REMARK 3 ORIGIN FOR THE GROUP (A): 26.8034 16.2251 29.5499 REMARK 3 T TENSOR REMARK 3 T11: 0.1190 T22: 0.1084 REMARK 3 T33: 0.1366 T12: -0.0641 REMARK 3 T13: 0.0533 T23: -0.0370 REMARK 3 L TENSOR REMARK 3 L11: 1.4203 L22: 0.5038 REMARK 3 L33: 2.2168 L12: -0.3442 REMARK 3 L13: -1.3218 L23: 0.3213 REMARK 3 S TENSOR REMARK 3 S11: 0.2343 S12: -0.2235 S13: 0.2094 REMARK 3 S21: -0.0848 S22: 0.0606 S23: -0.0656 REMARK 3 S31: -0.3935 S32: 0.2844 S33: -0.2949 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 114 B 158 REMARK 3 ORIGIN FOR THE GROUP (A): 8.8596 7.3597 15.8154 REMARK 3 T TENSOR REMARK 3 T11: 0.0640 T22: 0.2802 REMARK 3 T33: 0.0906 T12: 0.0278 REMARK 3 T13: -0.0125 T23: -0.0211 REMARK 3 L TENSOR REMARK 3 L11: 2.2808 L22: 0.8186 REMARK 3 L33: 3.0739 L12: 0.5044 REMARK 3 L13: -0.7399 L23: 0.7972 REMARK 3 S TENSOR REMARK 3 S11: 0.0420 S12: 0.6093 S13: -0.1609 REMARK 3 S21: -0.0929 S22: -0.0674 S23: 0.0822 REMARK 3 S31: 0.0357 S32: -0.7332 S33: 0.0254 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 159 B 188 REMARK 3 ORIGIN FOR THE GROUP (A): 32.2240 -2.2874 11.8415 REMARK 3 T TENSOR REMARK 3 T11: 0.0773 T22: 0.0821 REMARK 3 T33: 0.1343 T12: 0.0078 REMARK 3 T13: 0.0021 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 2.7678 L22: 1.3635 REMARK 3 L33: 6.3041 L12: -0.6809 REMARK 3 L13: -2.4471 L23: 1.5209 REMARK 3 S TENSOR REMARK 3 S11: -0.0138 S12: 0.1173 S13: -0.1757 REMARK 3 S21: -0.1034 S22: -0.0729 S23: 0.0817 REMARK 3 S31: 0.1432 S32: -0.1401 S33: 0.0868 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 189 B 214 REMARK 3 ORIGIN FOR THE GROUP (A): 11.0763 -5.7580 31.1821 REMARK 3 T TENSOR REMARK 3 T11: 0.1512 T22: 0.0669 REMARK 3 T33: 0.1345 T12: -0.0364 REMARK 3 T13: 0.0755 T23: -0.0188 REMARK 3 L TENSOR REMARK 3 L11: 4.4354 L22: 2.2839 REMARK 3 L33: 3.3199 L12: 0.8291 REMARK 3 L13: -2.6708 L23: 0.2835 REMARK 3 S TENSOR REMARK 3 S11: -0.4513 S12: 0.3741 S13: -0.4491 REMARK 3 S21: -0.1394 S22: 0.0762 S23: -0.0091 REMARK 3 S31: 0.6334 S32: -0.2230 S33: 0.3751 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 215 B 249 REMARK 3 ORIGIN FOR THE GROUP (A): 33.8557 -3.7540 24.2999 REMARK 3 T TENSOR REMARK 3 T11: 0.1241 T22: 0.1574 REMARK 3 T33: 0.0474 T12: 0.0500 REMARK 3 T13: 0.0226 T23: 0.0311 REMARK 3 L TENSOR REMARK 3 L11: 1.3948 L22: 3.8960 REMARK 3 L33: 4.6707 L12: -0.1727 REMARK 3 L13: -0.4849 L23: 1.8369 REMARK 3 S TENSOR REMARK 3 S11: -0.0805 S12: -0.3654 S13: -0.0984 REMARK 3 S21: 0.4360 S22: 0.0078 S23: 0.1332 REMARK 3 S31: 0.7346 S32: 0.3795 S33: 0.0727 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 250 B 283 REMARK 3 ORIGIN FOR THE GROUP (A): 13.8892 2.7175 21.1479 REMARK 3 T TENSOR REMARK 3 T11: 0.0472 T22: 0.1325 REMARK 3 T33: 0.0871 T12: -0.0194 REMARK 3 T13: 0.0076 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 2.9399 L22: 0.3617 REMARK 3 L33: 2.0453 L12: 0.2184 REMARK 3 L13: -1.9591 L23: 0.1450 REMARK 3 S TENSOR REMARK 3 S11: -0.1235 S12: 0.2492 S13: -0.2663 REMARK 3 S21: -0.0488 S22: -0.0226 S23: -0.0137 REMARK 3 S31: 0.1687 S32: -0.3511 S33: 0.1461 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 284 B 309 REMARK 3 ORIGIN FOR THE GROUP (A): 29.7588 -12.6390 12.8037 REMARK 3 T TENSOR REMARK 3 T11: 0.1716 T22: 0.0228 REMARK 3 T33: 0.1229 T12: -0.0166 REMARK 3 T13: 0.0682 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 4.7950 L22: 1.8531 REMARK 3 L33: 4.5425 L12: 0.2356 REMARK 3 L13: -2.2070 L23: 0.7036 REMARK 3 S TENSOR REMARK 3 S11: -0.1738 S12: 0.0285 S13: -0.3393 REMARK 3 S21: 0.1690 S22: -0.0920 S23: 0.1705 REMARK 3 S31: 0.7031 S32: -0.0641 S33: 0.2658 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 310 B 347 REMARK 3 ORIGIN FOR THE GROUP (A): 5.4686 -6.5053 19.1903 REMARK 3 T TENSOR REMARK 3 T11: 0.2521 T22: 0.4262 REMARK 3 T33: 0.1354 T12: -0.2859 REMARK 3 T13: 0.0447 T23: -0.1236 REMARK 3 L TENSOR REMARK 3 L11: 3.5564 L22: 1.1532 REMARK 3 L33: 2.2905 L12: -0.6560 REMARK 3 L13: -2.1327 L23: 1.0294 REMARK 3 S TENSOR REMARK 3 S11: -0.2968 S12: 0.4521 S13: -0.6103 REMARK 3 S21: 0.1224 S22: -0.0755 S23: 0.0921 REMARK 3 S31: 0.5892 S32: -0.7170 S33: 0.3723 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 348 B 383 REMARK 3 ORIGIN FOR THE GROUP (A): 32.6042 10.3085 4.7961 REMARK 3 T TENSOR REMARK 3 T11: 0.1241 T22: 0.0758 REMARK 3 T33: 0.0670 T12: 0.0065 REMARK 3 T13: 0.0373 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 4.2751 L22: 1.1694 REMARK 3 L33: 3.3940 L12: 0.5248 REMARK 3 L13: -2.6955 L23: -0.1345 REMARK 3 S TENSOR REMARK 3 S11: 0.1434 S12: 0.2662 S13: 0.0819 REMARK 3 S21: -0.1861 S22: 0.0046 S23: -0.0766 REMARK 3 S31: -0.3292 S32: -0.1142 S33: -0.1480 REMARK 3 REMARK 3 TLS GROUP : 21 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 384 B 391 REMARK 3 ORIGIN FOR THE GROUP (A): 39.7427 31.4280 -4.0425 REMARK 3 T TENSOR REMARK 3 T11: 1.2888 T22: 2.2201 REMARK 3 T33: 0.3321 T12: 1.1916 REMARK 3 T13: 0.6361 T23: 0.6527 REMARK 3 L TENSOR REMARK 3 L11: 1.0328 L22: 53.5209 REMARK 3 L33: 15.1508 L12: 6.3455 REMARK 3 L13: 3.4742 L23: 28.4308 REMARK 3 S TENSOR REMARK 3 S11: 0.3725 S12: 0.5022 S13: 0.3036 REMARK 3 S21: -1.8679 S22: -0.4854 S23: -0.0063 REMARK 3 S31: -0.7765 S32: -0.1594 S33: 0.1128 REMARK 3 REMARK 3 TLS GROUP : 22 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 392 B 471 REMARK 3 ORIGIN FOR THE GROUP (A): 42.6966 20.2088 9.7891 REMARK 3 T TENSOR REMARK 3 T11: 0.2748 T22: 0.1214 REMARK 3 T33: 0.1896 T12: -0.1518 REMARK 3 T13: 0.1889 T23: -0.0783 REMARK 3 L TENSOR REMARK 3 L11: 2.7522 L22: 1.3627 REMARK 3 L33: 3.0123 L12: 0.0899 REMARK 3 L13: -1.7151 L23: -0.0888 REMARK 3 S TENSOR REMARK 3 S11: 0.5024 S12: -0.2189 S13: 0.4823 REMARK 3 S21: -0.1865 S22: -0.0061 S23: -0.1618 REMARK 3 S31: -0.8226 S32: 0.4755 S33: -0.4963 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 10 CYCLES OF TLS REFINEMENT USING ISOTROPIC TEMPERATURE FACTORS REMARK 3 (11 GROUPS FOR EACH MOLECULE OF A.U.) FOLLOWED BY 10 CYCLES OF REMARK 3 MAXIMUM LIKELIHOOD RESTRAINED REFINEMENT WITH 0.07 WEIGHTING TERM, REMARK 3 0.035 JELLY-BODY REFINEMENT AND AUTOMATICALLY GENERATED LOCAL NCS REMARK 3 RESTRAINTS. REMARK 4 REMARK 4 6M9R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1000236422. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION JAN 26, 2018 REMARK 200 DATA SCALING SOFTWARE : XSCALE VERSION JAN 26, 2018 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 107050 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.685 REMARK 200 RESOLUTION RANGE LOW (A) : 54.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.200 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 8.20 REMARK 200 R MERGE FOR SHELL (I) : 0.87700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.520 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 6M9S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS, PH 8.5, 0.1 M MAGNESIUM REMARK 280 CHLORIDE, 14-20% W/V PEG4000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.97500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.27000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 53.86500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.27000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.97500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 53.86500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 HIS A 3 REMARK 465 THR A 134 REMARK 465 SER A 135 REMARK 465 GLY A 136 REMARK 465 ASP A 151 REMARK 465 THR A 152 REMARK 465 ALA A 153 REMARK 465 GLY A 154 REMARK 465 GLY A 155 REMARK 465 ALA A 156 REMARK 465 TYR A 216 REMARK 465 GLY A 217 REMARK 465 TYR A 218 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 THR B 134 REMARK 465 SER B 135 REMARK 465 GLY B 136 REMARK 465 THR B 152 REMARK 465 ALA B 153 REMARK 465 GLY B 154 REMARK 465 GLY B 155 REMARK 465 ALA B 156 REMARK 465 TYR B 216 REMARK 465 GLY B 217 REMARK 465 TYR B 218 REMARK 465 GLY B 219 REMARK 465 VAL B 220 REMARK 465 HIS B 221 REMARK 465 ASP B 222 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 99 CG CD OE1 OE2 REMARK 470 GLU A 133 CG CD OE1 OE2 REMARK 470 ASP A 144 CG OD1 OD2 REMARK 470 GLU A 157 CG CD OE1 OE2 REMARK 470 LYS A 163 CG CD CE NZ REMARK 470 LYS A 210 CG CD CE NZ REMARK 470 HIS A 293 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 320 CG CD NE CZ NH1 NH2 REMARK 470 MET A 321 CG SD CE REMARK 470 LYS A 328 CG CD CE NZ REMARK 470 HIS B 3 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 64 CG CD OE1 OE2 REMARK 470 GLU B 133 CG CD OE1 OE2 REMARK 470 GLN B 141 CG CD OE1 NE2 REMARK 470 ASP B 151 CG OD1 OD2 REMARK 470 GLU B 157 CG CD OE1 OE2 REMARK 470 ASP B 315 CG OD1 OD2 REMARK 470 ARG B 320 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 332 CG CD OE1 OE2 REMARK 470 GLU B 372 CG CD OE1 OE2 REMARK 470 GLU B 382 CG CD OE1 OE2 REMARK 470 LYS B 388 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 257 O HOH A 601 2.04 REMARK 500 ND2 ASN B 257 O HOH B 601 2.15 REMARK 500 OH TYR B 146 OE1 GLU B 347 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 190 -2.13 78.61 REMARK 500 HIS A 243 75.50 -107.45 REMARK 500 ALA B 190 -0.79 77.30 REMARK 500 HIS B 243 76.09 -107.26 REMARK 500 ASP B 315 -0.58 70.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1099 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH A1100 DISTANCE = 6.58 ANGSTROMS REMARK 525 HOH B1076 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH B1077 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH B1078 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH B1079 DISTANCE = 7.24 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 502 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 407 NE2 REMARK 620 2 HIS A 409 NE2 103.5 REMARK 620 3 HIS A 448 NE2 93.1 99.9 REMARK 620 4 J9Y A 501 NH2 114.6 136.2 98.9 REMARK 620 5 J9Y A 501 O1 85.8 84.7 175.4 77.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B 502 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 407 NE2 REMARK 620 2 HIS B 409 NE2 103.4 REMARK 620 3 HIS B 448 NE2 93.1 99.8 REMARK 620 4 J9Y B 501 NH2 118.1 133.0 99.1 REMARK 620 5 J9Y B 501 O1 88.0 87.2 172.4 73.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue J9Y A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue J9Y B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6M9S RELATED DB: PDB REMARK 900 N-TERMINAL POLY-HIS-TAGGED SEMET SZNF DBREF 6M9R A 1 471 PDB 6M9R 6M9R 1 471 DBREF 6M9R B 1 471 PDB 6M9R 6M9R 1 471 SEQRES 1 A 471 MET SER HIS VAL PRO PRO HIS VAL PRO PHE GLU LEU SER SEQRES 2 A 471 GLY ALA GLU LEU ARG ASP ALA ILE VAL GLN TYR ALA THR SEQRES 3 A 471 ASN PRO ILE TYR HIS ASP ASN LEU ASP TRP LEU ASN HIS SEQRES 4 A 471 ASP ASN PRO TYR ARG ARG GLN LEU ARG PRO GLN VAL LEU SEQRES 5 A 471 PRO HIS LEU ASP TYR ASP LYS VAL PRO GLY ARG GLU ASN SEQRES 6 A 471 ILE LEU ASN TYR ALA SER LEU ALA VAL GLN ARG LEU LEU SEQRES 7 A 471 THR SER VAL TYR GLU ALA ASP LEU VAL PHE PHE PRO LYS SEQRES 8 A 471 SER GLY LEU LYS GLY LYS GLU GLU ASP PHE ARG ALA PHE SEQRES 9 A 471 TYR SER PRO ALA ASN ARG ALA LEU GLY GLU ARG ILE ARG SEQRES 10 A 471 PRO ALA LEU GLU ARG TYR ALA PHE GLY PHE LEU ASP ASP SEQRES 11 A 471 GLU VAL GLU THR SER GLY THR TRP THR ALA GLN SER LEU SEQRES 12 A 471 ASP ALA TYR LEU ASP SER LEU ASP THR ALA GLY GLY ALA SEQRES 13 A 471 GLU GLN SER PRO VAL GLU LYS ALA ILE LEU GLY SER ALA SEQRES 14 A 471 ASP ARG GLU ARG ALA ALA ARG MET TRP LEU VAL GLN PHE SEQRES 15 A 471 ALA PRO ASP PHE LEU SER GLU ALA SER PRO MET MET ARG SEQRES 16 A 471 ASN VAL LEU GLY TYR TYR GLY PRO ALA GLN SER GLU TRP SEQRES 17 A 471 PHE LYS VAL VAL ILE ASP GLU TYR GLY TYR GLY VAL HIS SEQRES 18 A 471 ASP THR LYS HIS SER THR LEU PHE GLU ARG THR LEU GLU SEQRES 19 A 471 SER VAL GLY LEU GLU SER ASP LEU HIS ARG TYR TRP GLN SEQRES 20 A 471 TYR TYR LEU ASN SER SER LEU LEU LEU ASN ASN TYR PHE SEQRES 21 A 471 HIS TYR LEU GLY LYS ASN HIS GLU LEU PHE PHE ARG TYR SEQRES 22 A 471 VAL GLY ALA LEU TYR TYR THR GLU SER SER LEU VAL ASP SEQRES 23 A 471 PHE CYS ARG ARG ALA ASP HIS LEU LEU ARG GLU VAL PHE SEQRES 24 A 471 GLY ASP THR VAL ASP THR THR TYR PHE THR GLU HIS ILE SEQRES 25 A 471 HIS ILE ASP GLN HIS HIS GLY ARG MET ALA ARG GLU LYS SEQRES 26 A 471 ILE ILE LYS PRO LEU VAL GLU ALA HIS GLY ASP GLY ILE SEQRES 27 A 471 ILE PRO GLU ILE VAL ARG GLY ILE GLU GLU TYR ARG VAL SEQRES 28 A 471 LEU LEU GLU ILE GLY ASP PHE ASP PHE SER GLU GLN ILE SEQRES 29 A 471 ALA TRP MET ASP ALA GLN PRO GLU LEU LYS LYS LEU HIS SEQRES 30 A 471 ASP PRO VAL PHE GLU GLY LEU LYS GLN GLY LYS VAL ASP SEQRES 31 A 471 ALA PRO VAL ALA HIS LEU VAL GLU PRO ARG GLY GLU LEU SEQRES 32 A 471 SER ASN THR HIS CYS HIS ASP GLY ASP GLU LEU CYS HIS SEQRES 33 A 471 ILE VAL SER GLY THR MET ARG PHE GLU SER GLY LEU GLY SEQRES 34 A 471 SER SER LEU THR LEU GLN ALA GLY GLU GLY VAL VAL ILE SEQRES 35 A 471 LYS ARG ASN ARG LEU HIS GLY ALA ASN ILE GLU SER ASP SEQRES 36 A 471 GLU CYS VAL TYR GLU ILE HIS SER VAL GLY ASP TYR ARG SEQRES 37 A 471 LYS CYS LEU SEQRES 1 B 471 MET SER HIS VAL PRO PRO HIS VAL PRO PHE GLU LEU SER SEQRES 2 B 471 GLY ALA GLU LEU ARG ASP ALA ILE VAL GLN TYR ALA THR SEQRES 3 B 471 ASN PRO ILE TYR HIS ASP ASN LEU ASP TRP LEU ASN HIS SEQRES 4 B 471 ASP ASN PRO TYR ARG ARG GLN LEU ARG PRO GLN VAL LEU SEQRES 5 B 471 PRO HIS LEU ASP TYR ASP LYS VAL PRO GLY ARG GLU ASN SEQRES 6 B 471 ILE LEU ASN TYR ALA SER LEU ALA VAL GLN ARG LEU LEU SEQRES 7 B 471 THR SER VAL TYR GLU ALA ASP LEU VAL PHE PHE PRO LYS SEQRES 8 B 471 SER GLY LEU LYS GLY LYS GLU GLU ASP PHE ARG ALA PHE SEQRES 9 B 471 TYR SER PRO ALA ASN ARG ALA LEU GLY GLU ARG ILE ARG SEQRES 10 B 471 PRO ALA LEU GLU ARG TYR ALA PHE GLY PHE LEU ASP ASP SEQRES 11 B 471 GLU VAL GLU THR SER GLY THR TRP THR ALA GLN SER LEU SEQRES 12 B 471 ASP ALA TYR LEU ASP SER LEU ASP THR ALA GLY GLY ALA SEQRES 13 B 471 GLU GLN SER PRO VAL GLU LYS ALA ILE LEU GLY SER ALA SEQRES 14 B 471 ASP ARG GLU ARG ALA ALA ARG MET TRP LEU VAL GLN PHE SEQRES 15 B 471 ALA PRO ASP PHE LEU SER GLU ALA SER PRO MET MET ARG SEQRES 16 B 471 ASN VAL LEU GLY TYR TYR GLY PRO ALA GLN SER GLU TRP SEQRES 17 B 471 PHE LYS VAL VAL ILE ASP GLU TYR GLY TYR GLY VAL HIS SEQRES 18 B 471 ASP THR LYS HIS SER THR LEU PHE GLU ARG THR LEU GLU SEQRES 19 B 471 SER VAL GLY LEU GLU SER ASP LEU HIS ARG TYR TRP GLN SEQRES 20 B 471 TYR TYR LEU ASN SER SER LEU LEU LEU ASN ASN TYR PHE SEQRES 21 B 471 HIS TYR LEU GLY LYS ASN HIS GLU LEU PHE PHE ARG TYR SEQRES 22 B 471 VAL GLY ALA LEU TYR TYR THR GLU SER SER LEU VAL ASP SEQRES 23 B 471 PHE CYS ARG ARG ALA ASP HIS LEU LEU ARG GLU VAL PHE SEQRES 24 B 471 GLY ASP THR VAL ASP THR THR TYR PHE THR GLU HIS ILE SEQRES 25 B 471 HIS ILE ASP GLN HIS HIS GLY ARG MET ALA ARG GLU LYS SEQRES 26 B 471 ILE ILE LYS PRO LEU VAL GLU ALA HIS GLY ASP GLY ILE SEQRES 27 B 471 ILE PRO GLU ILE VAL ARG GLY ILE GLU GLU TYR ARG VAL SEQRES 28 B 471 LEU LEU GLU ILE GLY ASP PHE ASP PHE SER GLU GLN ILE SEQRES 29 B 471 ALA TRP MET ASP ALA GLN PRO GLU LEU LYS LYS LEU HIS SEQRES 30 B 471 ASP PRO VAL PHE GLU GLY LEU LYS GLN GLY LYS VAL ASP SEQRES 31 B 471 ALA PRO VAL ALA HIS LEU VAL GLU PRO ARG GLY GLU LEU SEQRES 32 B 471 SER ASN THR HIS CYS HIS ASP GLY ASP GLU LEU CYS HIS SEQRES 33 B 471 ILE VAL SER GLY THR MET ARG PHE GLU SER GLY LEU GLY SEQRES 34 B 471 SER SER LEU THR LEU GLN ALA GLY GLU GLY VAL VAL ILE SEQRES 35 B 471 LYS ARG ASN ARG LEU HIS GLY ALA ASN ILE GLU SER ASP SEQRES 36 B 471 GLU CYS VAL TYR GLU ILE HIS SER VAL GLY ASP TYR ARG SEQRES 37 B 471 LYS CYS LEU HET J9Y A 501 14 HET FE A 502 1 HET J9Y B 501 14 HET FE B 502 1 HETNAM J9Y (2S)-2-AMINO-5-{[(E)-AMINO(METHYLAMINO) HETNAM 2 J9Y METHYLIDENE](HYDROXY)AZANIUMYL}PENTANOATE HETNAM FE FE (III) ION FORMUL 3 J9Y 2(C7 H16 N4 O3) FORMUL 4 FE 2(FE 3+) FORMUL 7 HOH *979(H2 O) HELIX 1 AA1 SER A 13 THR A 26 1 14 HELIX 2 AA2 ASN A 27 HIS A 31 5 5 HELIX 3 AA3 ARG A 48 LEU A 55 5 8 HELIX 4 AA4 GLY A 62 ILE A 66 5 5 HELIX 5 AA5 ASN A 68 ALA A 84 1 17 HELIX 6 AA6 LYS A 97 TYR A 105 1 9 HELIX 7 AA7 SER A 106 GLY A 126 1 21 HELIX 8 AA8 PHE A 127 VAL A 132 1 6 HELIX 9 AA9 THR A 139 SER A 149 1 11 HELIX 10 AB1 SER A 159 GLY A 167 1 9 HELIX 11 AB2 ASP A 170 PHE A 182 1 13 HELIX 12 AB3 PHE A 182 LEU A 187 1 6 HELIX 13 AB4 ALA A 190 ARG A 195 1 6 HELIX 14 AB5 GLY A 202 GLU A 215 1 14 HELIX 15 AB6 VAL A 220 THR A 223 5 4 HELIX 16 AB7 LYS A 224 VAL A 236 1 13 HELIX 17 AB8 TYR A 245 TYR A 249 5 5 HELIX 18 AB9 LEU A 250 ASN A 266 1 17 HELIX 19 AC1 LEU A 269 GLY A 300 1 32 HELIX 20 AC2 ASP A 301 VAL A 303 5 3 HELIX 21 AC3 THR A 305 GLU A 310 1 6 HELIX 22 AC4 HIS A 318 ILE A 326 1 9 HELIX 23 AC5 ILE A 326 GLY A 335 1 10 HELIX 24 AC6 ILE A 338 ALA A 369 1 32 HELIX 25 AC7 ALA A 369 GLN A 386 1 18 HELIX 26 AC8 ASP A 466 LEU A 471 5 6 HELIX 27 AC9 SER B 13 THR B 26 1 14 HELIX 28 AD1 ASN B 27 HIS B 31 5 5 HELIX 29 AD2 ARG B 48 LEU B 55 5 8 HELIX 30 AD3 GLY B 62 ILE B 66 5 5 HELIX 31 AD4 ASN B 68 ALA B 84 1 17 HELIX 32 AD5 LYS B 97 TYR B 105 1 9 HELIX 33 AD6 SER B 106 GLY B 126 1 21 HELIX 34 AD7 PHE B 127 VAL B 132 1 6 HELIX 35 AD8 THR B 139 SER B 149 1 11 HELIX 36 AD9 SER B 159 GLY B 167 1 9 HELIX 37 AE1 ASP B 170 PHE B 182 1 13 HELIX 38 AE2 PHE B 182 LEU B 187 1 6 HELIX 39 AE3 ALA B 190 ARG B 195 1 6 HELIX 40 AE4 GLY B 202 GLU B 215 1 14 HELIX 41 AE5 LYS B 224 VAL B 236 1 13 HELIX 42 AE6 TYR B 245 TYR B 249 5 5 HELIX 43 AE7 LEU B 250 ASN B 266 1 17 HELIX 44 AE8 LEU B 269 GLY B 300 1 32 HELIX 45 AE9 ASP B 301 VAL B 303 5 3 HELIX 46 AF1 THR B 305 GLU B 310 1 6 HELIX 47 AF2 HIS B 318 ILE B 326 1 9 HELIX 48 AF3 ILE B 326 GLY B 335 1 10 HELIX 49 AF4 ILE B 338 ALA B 369 1 32 HELIX 50 AF5 ALA B 369 GLY B 387 1 19 HELIX 51 AF6 ASP B 466 LEU B 471 5 6 SHEET 1 AA1 2 VAL A 87 PHE A 88 0 SHEET 2 AA1 2 GLY B 199 TYR B 200 1 O TYR B 200 N VAL A 87 SHEET 1 AA2 2 GLY A 199 TYR A 200 0 SHEET 2 AA2 2 VAL B 87 PHE B 88 1 O VAL B 87 N TYR A 200 SHEET 1 AA3 4 VAL A 393 PRO A 399 0 SHEET 2 AA3 4 GLU A 456 GLY A 465 -1 O TYR A 459 N LEU A 396 SHEET 3 AA3 4 ASP A 412 SER A 419 -1 N LEU A 414 O HIS A 462 SHEET 4 AA3 4 GLY A 439 ILE A 442 -1 O ILE A 442 N GLU A 413 SHEET 1 AA4 4 SER A 404 HIS A 407 0 SHEET 2 AA4 4 HIS A 448 ILE A 452 -1 O ALA A 450 N SER A 404 SHEET 3 AA4 4 MET A 422 GLY A 427 -1 N ARG A 423 O ASN A 451 SHEET 4 AA4 4 SER A 430 LEU A 434 -1 O LEU A 432 N PHE A 424 SHEET 1 AA5 4 VAL B 393 PRO B 399 0 SHEET 2 AA5 4 GLU B 456 GLY B 465 -1 O TYR B 459 N LEU B 396 SHEET 3 AA5 4 ASP B 412 SER B 419 -1 N LEU B 414 O HIS B 462 SHEET 4 AA5 4 GLY B 439 ILE B 442 -1 O ILE B 442 N GLU B 413 SHEET 1 AA6 4 SER B 404 HIS B 407 0 SHEET 2 AA6 4 HIS B 448 ILE B 452 -1 O ALA B 450 N SER B 404 SHEET 3 AA6 4 MET B 422 GLY B 427 -1 N ARG B 423 O ASN B 451 SHEET 4 AA6 4 SER B 430 LEU B 434 -1 O LEU B 432 N PHE B 424 LINK NE2 HIS A 407 FE FE A 502 1555 1555 2.15 LINK NE2 HIS A 409 FE FE A 502 1555 1555 2.05 LINK NE2 HIS A 448 FE FE A 502 1555 1555 2.24 LINK NH2 J9Y A 501 FE FE A 502 1555 1555 2.02 LINK O1 J9Y A 501 FE FE A 502 1555 1555 2.27 LINK NE2 HIS B 407 FE FE B 502 1555 1555 2.18 LINK NE2 HIS B 409 FE FE B 502 1555 1555 2.01 LINK NE2 HIS B 448 FE FE B 502 1555 1555 2.24 LINK NH2AJ9Y B 501 FE FE B 502 1555 1555 2.17 LINK O1 AJ9Y B 501 FE FE B 502 1555 1555 2.23 CISPEP 1 LEU A 242 HIS A 243 0 -16.08 CISPEP 2 LEU B 242 HIS B 243 0 -16.84 SITE 1 AC1 15 ARG A 48 LEU A 396 GLU A 398 SER A 404 SITE 2 AC1 15 HIS A 407 HIS A 409 HIS A 448 ALA A 450 SITE 3 AC1 15 TYR A 459 FE A 502 HOH A 628 HOH A 642 SITE 4 AC1 15 HOH A 723 HOH A 752 HOH A 828 SITE 1 AC2 4 HIS A 407 HIS A 409 HIS A 448 J9Y A 501 SITE 1 AC3 15 ARG B 48 GLU B 398 SER B 404 HIS B 407 SITE 2 AC3 15 HIS B 409 HIS B 448 TYR B 459 FE B 502 SITE 3 AC3 15 HOH B 680 HOH B 700 HOH B 701 HOH B 761 SITE 4 AC3 15 HOH B 818 HOH B 839 HOH B 871 SITE 1 AC4 4 HIS B 407 HIS B 409 HIS B 448 J9Y B 501 CRYST1 57.950 107.730 150.540 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017256 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009282 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006643 0.00000