HEADER SUGAR BINDING PROTEIN/INHIBITOR 28-AUG-18 6MAP TITLE F9 PILUS ADHESIN FMLH LECTIN DOMAIN FROM E. COLI UTI89 IN COMPLEX WITH TITLE 2 GALACTOSIDE 5-NITRO-2'-{[(2S,3R,4S,5R,6R)-3,4,5-TRIHYDROXY-6- TITLE 3 (HYDROXYMETHYL)OXAN-2-YL]OXY}-[1,1'-BIPHENYL]-3-CARBOXYLIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIMBRIAL ADHESIN FMLD; COMPND 3 CHAIN: B; COMPND 4 SYNONYM: FIMBRIAL PROTEIN,FIMBRIAL-LIKE PROTEIN YDEQ,FML FIMBRIAL COMPND 5 ADHESIN FMLD,PUTATIVE ADHESIN SIMILAR TO FIMH PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI UTI89; SOURCE 3 ORGANISM_TAXID: 364106; SOURCE 4 STRAIN: UTI89; SOURCE 5 GENE: B1502, FMLD, YDEQ, AC789_1C16310, ACN002_1542, B1K96_25685, SOURCE 6 BK292_08390, BN17_21261, C7B02_22960, CR538_13120, CWS33_06125, SOURCE 7 CXB56_15680, HW43_11455, RX35_00290; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 83333 KEYWDS PILUS, ADHESIN, GALACTOSE, LECTIN, SUGAR BINDING PROTEIN, SUGAR KEYWDS 2 BINDING PROTEIN-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.D.KLEIN,S.J.HULTGREN REVDAT 4 13-DEC-23 6MAP 1 JRNL REVDAT 3 11-OCT-23 6MAP 1 REMARK REVDAT 2 18-DEC-19 6MAP 1 REMARK REVDAT 1 04-SEP-19 6MAP 0 JRNL AUTH A.R.MADDIRALA,R.KLEIN,J.S.PINKNER,V.KALAS,S.J.HULTGREN, JRNL AUTH 2 J.W.JANETKA JRNL TITL BIPHENYL GAL AND GALNAC FMLH LECTIN ANTAGONISTS OF JRNL TITL 2 UROPATHOGENIC E. COLI (UPEC): OPTIMIZATION THROUGH ITERATIVE JRNL TITL 3 RATIONAL DRUG DESIGN. JRNL REF J.MED.CHEM. V. 62 467 2019 JRNL REFN ISSN 0022-2623 JRNL PMID 30540910 JRNL DOI 10.1021/ACS.JMEDCHEM.8B01561 REMARK 2 REMARK 2 RESOLUTION. 1.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.32 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 82908 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 4137 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.3440 - 3.3551 1.00 3022 152 0.1797 0.2050 REMARK 3 2 3.3551 - 2.6633 1.00 2884 146 0.1905 0.2094 REMARK 3 3 2.6633 - 2.3267 1.00 2823 151 0.1914 0.2295 REMARK 3 4 2.3267 - 2.1140 1.00 2824 112 0.1748 0.1985 REMARK 3 5 2.1140 - 1.9624 1.00 2754 159 0.1688 0.1813 REMARK 3 6 1.9624 - 1.8467 1.00 2766 155 0.1708 0.1689 REMARK 3 7 1.8467 - 1.7543 1.00 2780 139 0.1783 0.1753 REMARK 3 8 1.7543 - 1.6779 1.00 2744 141 0.1752 0.1852 REMARK 3 9 1.6779 - 1.6133 1.00 2769 136 0.1880 0.2168 REMARK 3 10 1.6133 - 1.5576 1.00 2704 169 0.1814 0.1784 REMARK 3 11 1.5576 - 1.5089 1.00 2765 138 0.1859 0.2101 REMARK 3 12 1.5089 - 1.4658 1.00 2693 164 0.1903 0.2162 REMARK 3 13 1.4658 - 1.4272 1.00 2734 147 0.1968 0.2094 REMARK 3 14 1.4272 - 1.3924 1.00 2726 146 0.2067 0.2071 REMARK 3 15 1.3924 - 1.3607 1.00 2711 159 0.2055 0.2223 REMARK 3 16 1.3607 - 1.3318 1.00 2748 120 0.2179 0.2091 REMARK 3 17 1.3318 - 1.3051 1.00 2719 135 0.2179 0.2387 REMARK 3 18 1.3051 - 1.2805 1.00 2704 159 0.2269 0.2500 REMARK 3 19 1.2805 - 1.2576 1.00 2724 146 0.2380 0.2302 REMARK 3 20 1.2576 - 1.2363 1.00 2728 132 0.2528 0.2430 REMARK 3 21 1.2363 - 1.2164 1.00 2685 145 0.2491 0.2956 REMARK 3 22 1.2164 - 1.1976 1.00 2721 140 0.2518 0.2643 REMARK 3 23 1.1976 - 1.1800 1.00 2732 143 0.2591 0.2510 REMARK 3 24 1.1800 - 1.1634 1.00 2674 155 0.2606 0.2972 REMARK 3 25 1.1634 - 1.1477 1.00 2712 122 0.2743 0.2877 REMARK 3 26 1.1477 - 1.1328 1.00 2694 138 0.2863 0.3410 REMARK 3 27 1.1328 - 1.1186 0.97 2600 150 0.3146 0.3204 REMARK 3 28 1.1186 - 1.1051 0.61 1486 71 0.3456 0.3882 REMARK 3 29 1.1051 - 1.0923 0.58 1034 57 0.3215 0.3716 REMARK 3 30 1.0923 - 1.0800 0.78 2111 110 0.3498 0.3395 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1309 REMARK 3 ANGLE : 1.298 1795 REMARK 3 CHIRALITY : 0.075 200 REMARK 3 PLANARITY : 0.005 224 REMARK 3 DIHEDRAL : 16.349 450 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6MAP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1000236543. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41077 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.390 REMARK 200 RESOLUTION RANGE LOW (A) : 38.320 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 14.20 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.20 REMARK 200 R MERGE FOR SHELL (I) : 0.52600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.180 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 6AOW REMARK 200 REMARK 200 REMARK: BIPYRIMIDAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS 8.0, 0.8 M AMSO4, 10% DSMO, REMARK 280 PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.64600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.55900 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.55900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 90.96900 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.55900 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.55900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 30.32300 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.55900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.55900 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 90.96900 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.55900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.55900 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 30.32300 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 60.64600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA B 113 REMARK 465 ALA B 114 REMARK 465 GLY B 115 REMARK 465 THR B 158 REMARK 465 GLY B 159 REMARK 465 GLY B 160 REMARK 465 HIS B 161 REMARK 465 HIS B 162 REMARK 465 HIS B 163 REMARK 465 HIS B 164 REMARK 465 HIS B 165 REMARK 465 HIS B 166 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER B 66 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 444 O HOH B 488 1.81 REMARK 500 O HOH B 459 O HOH B 481 1.90 REMARK 500 O HOH B 309 O HOH B 322 1.92 REMARK 500 O HOH B 511 O HOH B 520 1.95 REMARK 500 O4 SO4 B 201 O HOH B 301 1.95 REMARK 500 O HOH B 323 O HOH B 511 1.96 REMARK 500 O3 SO4 B 201 O HOH B 302 1.96 REMARK 500 O HOH B 461 O HOH B 462 1.99 REMARK 500 O HOH B 368 O HOH B 490 2.02 REMARK 500 OD1 ASP B 96 O HOH B 303 2.03 REMARK 500 NZ LYS B 71 O HOH B 304 2.12 REMARK 500 NH2 ARG B 127 O3 SO4 B 201 2.13 REMARK 500 O HOH B 405 O HOH B 509 2.16 REMARK 500 OG SER B 153 O HOH B 305 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE ARG B 127 O2 SO4 B 204 4555 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 78 0.20 81.71 REMARK 500 ALA B 134 -152.47 -95.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 525 DISTANCE = 5.82 ANGSTROMS REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 SO4 B 201 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue JC4 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue JC4 B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 206 DBREF 6MAP B 1 160 UNP J7QR14 J7QR14_ECOLX 25 184 SEQADV 6MAP HIS B 161 UNP J7QR14 EXPRESSION TAG SEQADV 6MAP HIS B 162 UNP J7QR14 EXPRESSION TAG SEQADV 6MAP HIS B 163 UNP J7QR14 EXPRESSION TAG SEQADV 6MAP HIS B 164 UNP J7QR14 EXPRESSION TAG SEQADV 6MAP HIS B 165 UNP J7QR14 EXPRESSION TAG SEQADV 6MAP HIS B 166 UNP J7QR14 EXPRESSION TAG SEQRES 1 B 166 PHE SER CYS ASN VAL ASP GLY GLY SER SER ILE GLY ALA SEQRES 2 B 166 GLY THR THR SER VAL TYR VAL ASN LEU ASP PRO VAL ILE SEQRES 3 B 166 GLN PRO GLY GLN ASN LEU VAL VAL ASP LEU SER GLN HIS SEQRES 4 B 166 ILE SER CYS TRP ASN ASP TYR GLY GLY TRP TYR ASP THR SEQRES 5 B 166 ASP HIS ILE ASN LEU VAL GLN GLY SER ALA PHE ALA GLY SEQRES 6 B 166 SER LEU GLN SER TYR LYS GLY SER LEU TYR TRP ASN ASN SEQRES 7 B 166 VAL THR TYR PRO PHE PRO LEU THR THR ASN THR ASN VAL SEQRES 8 B 166 LEU ASP ILE GLY ASP LYS THR PRO MET PRO LEU PRO LEU SEQRES 9 B 166 LYS LEU TYR ILE THR PRO VAL GLY ALA ALA GLY GLY VAL SEQRES 10 B 166 VAL ILE LYS ALA GLY GLU VAL ILE ALA ARG ILE HIS MET SEQRES 11 B 166 TYR LYS ILE ALA THR LEU GLY SER GLY ASN PRO ARG ASN SEQRES 12 B 166 PHE THR TRP ASN ILE ILE SER ASN ASN SER VAL VAL MET SEQRES 13 B 166 PRO THR GLY GLY HIS HIS HIS HIS HIS HIS HET SO4 B 201 5 HET JC4 B 202 30 HET JC4 B 203 30 HET SO4 B 204 5 HET GOL B 205 14 HET GOL B 206 14 HETNAM SO4 SULFATE ION HETNAM JC4 2'-(BETA-D-GALACTOPYRANOSYLOXY)-5-NITRO[1,1'-BIPHENYL]- HETNAM 2 JC4 3-CARBOXYLIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SO4 2(O4 S 2-) FORMUL 3 JC4 2(C19 H19 N O10) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 8 HOH *225(H2 O) HELIX 1 AA1 GLY B 65 GLN B 68 5 4 SHEET 1 AA1 3 SER B 2 VAL B 5 0 SHEET 2 AA1 3 ILE B 40 TRP B 43 -1 O TRP B 43 N SER B 2 SHEET 3 AA1 3 MET B 100 PRO B 101 -1 O MET B 100 N CYS B 42 SHEET 1 AA2 4 GLY B 14 VAL B 20 0 SHEET 2 AA2 4 ARG B 142 SER B 150 1 O ASN B 143 N GLY B 14 SHEET 3 AA2 4 VAL B 124 ILE B 133 -1 N ILE B 125 O ILE B 148 SHEET 4 AA2 4 ALA B 62 PHE B 63 -1 N ALA B 62 O ARG B 127 SHEET 1 AA3 5 GLY B 14 VAL B 20 0 SHEET 2 AA3 5 ARG B 142 SER B 150 1 O ASN B 143 N GLY B 14 SHEET 3 AA3 5 VAL B 124 ILE B 133 -1 N ILE B 125 O ILE B 148 SHEET 4 AA3 5 ASP B 53 LEU B 57 -1 N ASN B 56 O TYR B 131 SHEET 5 AA3 5 LEU B 92 ILE B 94 -1 O LEU B 92 N ILE B 55 SHEET 1 AA4 4 LEU B 32 ASP B 35 0 SHEET 2 AA4 4 LEU B 104 THR B 109 -1 O LEU B 106 N VAL B 34 SHEET 3 AA4 4 LYS B 71 TRP B 76 -1 N LYS B 71 O THR B 109 SHEET 4 AA4 4 VAL B 79 PHE B 83 -1 O TYR B 81 N LEU B 74 SHEET 1 AA5 2 VAL B 117 ILE B 119 0 SHEET 2 AA5 2 VAL B 154 VAL B 155 -1 O VAL B 154 N VAL B 118 SSBOND 1 CYS B 3 CYS B 42 1555 1555 2.04 CISPEP 1 PHE B 83 PRO B 84 0 7.83 SITE 1 AC1 23 PHE B 1 SER B 2 ILE B 11 GLY B 12 SITE 2 AC1 23 GLY B 29 ASN B 44 ASP B 45 TYR B 46 SITE 3 AC1 23 ASP B 51 ASP B 53 LYS B 132 ALA B 134 SITE 4 AC1 23 GLY B 139 ASN B 140 ARG B 142 HOH B 313 SITE 5 AC1 23 HOH B 332 HOH B 346 HOH B 356 HOH B 393 SITE 6 AC1 23 HOH B 398 HOH B 417 HOH B 438 SITE 1 AC2 14 TYR B 46 TYR B 50 ASN B 56 VAL B 58 SITE 2 AC2 14 ASN B 88 MET B 130 TYR B 131 ASN B 143 SITE 3 AC2 14 HOH B 360 HOH B 389 HOH B 406 HOH B 421 SITE 4 AC2 14 HOH B 439 HOH B 456 SITE 1 AC3 9 THR B 52 HIS B 54 PHE B 63 ALA B 64 SITE 2 AC3 9 GLY B 65 ASP B 93 ARG B 127 THR B 135 SITE 3 AC3 9 HOH B 310 SITE 1 AC4 10 ASP B 6 VAL B 79 THR B 80 TYR B 81 SITE 2 AC4 10 PRO B 82 ASN B 151 HOH B 309 HOH B 312 SITE 3 AC4 10 HOH B 316 HOH B 322 SITE 1 AC5 7 VAL B 20 ASN B 21 VAL B 33 VAL B 34 SITE 2 AC5 7 ASP B 35 HIS B 39 HOH B 319 CRYST1 57.118 57.118 121.292 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017508 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017508 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008245 0.00000