HEADER TRANSFERASE/ANTIBIOTIC 29-AUG-18 6MB8 TITLE APO STRUCTURE OF AAC-IIIB COMPND MOL_ID: 1; COMPND 2 MOLECULE: AAC(3)-IIIB PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: AAC(3)-IIIB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI DH1; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 536056; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: DH1 KEYWDS ACETYLTRANSFERASE, PROMISCUITY, GNAT, ANTIBIOTIC RESISTANCE, KEYWDS 2 ANTIBIOTIC, TRANSFERASE-ANTIBIOTIC COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.J.CUNEO,P.KUMAR REVDAT 3 11-OCT-23 6MB8 1 REMARK REVDAT 2 05-DEC-18 6MB8 1 JRNL REVDAT 1 07-NOV-18 6MB8 0 JRNL AUTH P.KUMAR,B.SELVARAJ,E.H.SERPERSU,M.J.CUNEO JRNL TITL ENCODING OF PROMISCUITY IN AN AMINOGLYCOSIDE JRNL TITL 2 ACETYLTRANSFERASE. JRNL REF J. MED. CHEM. V. 61 10218 2018 JRNL REFN ISSN 1520-4804 JRNL PMID 30347146 JRNL DOI 10.1021/ACS.JMEDCHEM.8B01393 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 140555 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.420 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.9976 - 3.8551 1.00 10278 149 0.1512 0.1510 REMARK 3 2 3.8551 - 3.0602 1.00 9979 143 0.1517 0.1674 REMARK 3 3 3.0602 - 2.6735 1.00 9954 143 0.1857 0.2003 REMARK 3 4 2.6735 - 2.4291 1.00 9896 143 0.1838 0.1981 REMARK 3 5 2.4291 - 2.2550 1.00 9894 144 0.1832 0.2023 REMARK 3 6 2.2550 - 2.1221 1.00 9895 142 0.1833 0.2031 REMARK 3 7 2.1221 - 2.0158 1.00 9823 142 0.1901 0.2163 REMARK 3 8 2.0158 - 1.9280 1.00 9874 142 0.1982 0.1879 REMARK 3 9 1.9280 - 1.8538 1.00 9859 142 0.2059 0.2437 REMARK 3 10 1.8538 - 1.7898 1.00 9820 142 0.2169 0.2475 REMARK 3 11 1.7898 - 1.7339 1.00 9844 143 0.2396 0.2576 REMARK 3 12 1.7339 - 1.6843 1.00 9831 141 0.2587 0.2935 REMARK 3 13 1.6843 - 1.6400 1.00 9781 141 0.2599 0.2708 REMARK 3 14 1.6400 - 1.6000 0.99 9828 142 0.2702 0.2675 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 7 THROUGH 52 OR RESID REMARK 3 54 THROUGH 105 OR RESID 108 THROUGH 188 REMARK 3 OR RESID 190 THROUGH 206 OR RESID 208 REMARK 3 THROUGH 211 OR RESID 213 THROUGH 270)) REMARK 3 SELECTION : (CHAIN B AND (RESID 7 THROUGH 52 OR RESID REMARK 3 54 THROUGH 105 OR RESID 108 THROUGH 188 REMARK 3 OR RESID 190 THROUGH 206 OR RESID 208 REMARK 3 THROUGH 211 OR RESID 213 THROUGH 270)) REMARK 3 ATOM PAIRS NUMBER : 1542 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6MB8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1000236420. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-AUG-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 140647 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.03800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.66000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6BC3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.0 M SODIUM FORMATE, 10-20 % REMARK 280 GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.56300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.56300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 68.62800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 81.94850 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 68.62800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 81.94850 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.56300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 68.62800 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 81.94850 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 47.56300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 68.62800 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 81.94850 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -47.56300 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 814 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 SER A 3 REMARK 465 ALA A 4 REMARK 465 THR A 5 REMARK 465 ALA A 6 REMARK 465 PRO A 272 REMARK 465 SER A 273 REMARK 465 PRO A 274 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 SER B 3 REMARK 465 ALA B 4 REMARK 465 THR B 5 REMARK 465 THR B 271 REMARK 465 PRO B 272 REMARK 465 SER B 273 REMARK 465 PRO B 274 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 271 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 558 O HOH B 703 1.84 REMARK 500 O HOH A 650 O HOH A 728 1.87 REMARK 500 O HOH B 526 O HOH B 575 1.89 REMARK 500 O HOH B 404 O HOH B 687 1.90 REMARK 500 O HOH A 510 O HOH A 523 1.93 REMARK 500 O HOH B 619 O HOH B 731 1.95 REMARK 500 O HOH A 587 O HOH A 632 1.96 REMARK 500 NH2 ARG B 97 O HOH B 401 1.98 REMARK 500 CL CL B 301 O HOH B 682 2.01 REMARK 500 O HOH A 510 O HOH A 728 2.01 REMARK 500 OD2 ASP B 43 O HOH B 402 2.03 REMARK 500 O HOH B 599 O HOH B 691 2.04 REMARK 500 O HOH B 403 O HOH B 589 2.04 REMARK 500 O HOH A 433 O HOH B 417 2.04 REMARK 500 O HOH B 413 O HOH B 541 2.05 REMARK 500 CL CL A 301 O HOH B 671 2.06 REMARK 500 NE2 GLN A 96 O HOH A 401 2.07 REMARK 500 O HOH A 745 O HOH A 807 2.08 REMARK 500 NH2 ARG A 53 O HOH A 402 2.09 REMARK 500 O ALA A 9 O HOH A 403 2.10 REMARK 500 O HOH B 549 O HOH B 690 2.10 REMARK 500 O HOH B 414 O HOH B 427 2.10 REMARK 500 O HOH A 773 O HOH A 790 2.10 REMARK 500 O HOH A 413 O HOH A 680 2.11 REMARK 500 NH1 ARG B 97 O HOH B 403 2.11 REMARK 500 O HOH B 575 O HOH B 627 2.11 REMARK 500 O HOH A 682 O HOH A 807 2.12 REMARK 500 O HOH B 415 O HOH B 755 2.12 REMARK 500 O HOH A 516 O HOH A 633 2.12 REMARK 500 O HOH A 412 O HOH A 419 2.13 REMARK 500 O HOH A 408 O HOH A 499 2.13 REMARK 500 O HOH A 447 O HOH A 676 2.13 REMARK 500 O HOH A 657 O HOH A 701 2.14 REMARK 500 O HOH A 681 O HOH A 816 2.16 REMARK 500 O HOH A 516 O HOH B 537 2.16 REMARK 500 O HOH A 510 O HOH A 643 2.16 REMARK 500 O HOH B 795 O HOH B 812 2.16 REMARK 500 O HOH A 756 O HOH A 800 2.18 REMARK 500 O HOH B 713 O HOH B 766 2.18 REMARK 500 NH1 ARG B 240 O HOH B 404 2.18 REMARK 500 O HOH A 599 O HOH A 756 2.19 REMARK 500 O HOH A 601 O HOH A 711 2.19 REMARK 500 O PHE B 269 O HOH B 405 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 499 O HOH B 453 6445 1.79 REMARK 500 O HOH A 522 O HOH A 771 3554 2.09 REMARK 500 O HOH A 681 O HOH A 783 3554 2.11 REMARK 500 O HOH A 662 O HOH A 703 3554 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 97 NE - CZ - NH1 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG B 97 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 67 -161.20 56.77 REMARK 500 ASP B 67 -160.73 57.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA B 6 SER B 7 121.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 839 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH A 840 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH B 855 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH B 856 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH B 857 DISTANCE = 6.71 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 301 REMARK 999 REMARK 999 SEQUENCE REMARK 999 SEE NCBI REFERENCE SEQUENCE: WP_088170001.1 DBREF 6MB8 A 30 274 UNP Q51405 Q51405_PSEAI 1 245 DBREF 6MB8 B 30 274 UNP Q51405 Q51405_PSEAI 1 245 SEQADV 6MB8 MET A 1 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 THR A 2 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 SER A 3 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ALA A 4 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 THR A 5 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ALA A 6 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 SER A 7 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 PHE A 8 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ALA A 9 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 THR A 10 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ARG A 11 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 THR A 12 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 SER A 13 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 LEU A 14 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ALA A 15 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ALA A 16 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ASP A 17 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 LEU A 18 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ALA A 19 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ALA A 20 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 LEU A 21 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 GLY A 22 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 LEU A 23 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ALA A 24 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 TRP A 25 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 GLY A 26 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ASP A 27 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ALA A 28 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ILE A 29 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 MET B 1 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 THR B 2 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 SER B 3 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ALA B 4 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 THR B 5 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ALA B 6 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 SER B 7 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 PHE B 8 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ALA B 9 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 THR B 10 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ARG B 11 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 THR B 12 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 SER B 13 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 LEU B 14 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ALA B 15 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ALA B 16 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ASP B 17 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 LEU B 18 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ALA B 19 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ALA B 20 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 LEU B 21 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 GLY B 22 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 LEU B 23 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ALA B 24 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 TRP B 25 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 GLY B 26 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ASP B 27 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ALA B 28 UNP Q51405 SEE REMARK 999 SEQADV 6MB8 ILE B 29 UNP Q51405 SEE REMARK 999 SEQRES 1 A 274 MET THR SER ALA THR ALA SER PHE ALA THR ARG THR SER SEQRES 2 A 274 LEU ALA ALA ASP LEU ALA ALA LEU GLY LEU ALA TRP GLY SEQRES 3 A 274 ASP ALA ILE MET VAL HIS ALA ALA VAL SER ARG VAL GLY SEQRES 4 A 274 ARG LEU LEU ASP GLY PRO ASP THR ILE ILE ALA ALA LEU SEQRES 5 A 274 ARG ASP THR VAL GLY PRO GLY GLY THR VAL LEU ALA TYR SEQRES 6 A 274 ALA ASP TRP GLU ALA ARG TYR GLU ASP LEU VAL ASP ASP SEQRES 7 A 274 ALA GLY ARG VAL PRO PRO GLU TRP ARG GLU HIS VAL PRO SEQRES 8 A 274 PRO PHE ASP PRO GLN ARG SER ARG ALA ILE ARG ASP ASN SEQRES 9 A 274 GLY VAL LEU PRO GLU PHE LEU ARG THR THR PRO GLY THR SEQRES 10 A 274 LEU ARG SER GLY ASN PRO GLY ALA SER LEU VAL ALA LEU SEQRES 11 A 274 GLY ALA LYS ALA GLU TRP PHE THR ALA ASP HIS PRO LEU SEQRES 12 A 274 ASP TYR GLY TYR GLY GLU GLY SER PRO LEU ALA LYS LEU SEQRES 13 A 274 VAL GLU ALA GLY GLY LYS VAL LEU MET LEU GLY ALA PRO SEQRES 14 A 274 LEU ASP THR LEU THR LEU LEU HIS HIS ALA GLU HIS LEU SEQRES 15 A 274 ALA ASP ILE PRO GLY LYS ARG ILE LYS ARG ILE GLU VAL SEQRES 16 A 274 PRO PHE ALA THR PRO THR GLY THR GLN TRP ARG MET ILE SEQRES 17 A 274 GLU GLU PHE ASP THR GLY ASP PRO ILE VAL ALA GLY LEU SEQRES 18 A 274 ALA GLU ASP TYR PHE ALA GLY ILE VAL THR GLU PHE LEU SEQRES 19 A 274 ALA SER GLY GLN GLY ARG GLN GLY LEU ILE GLY ALA ALA SEQRES 20 A 274 PRO SER VAL LEU VAL ASP ALA ALA ALA ILE THR ALA PHE SEQRES 21 A 274 GLY VAL THR TRP LEU GLU LYS ARG PHE GLY THR PRO SER SEQRES 22 A 274 PRO SEQRES 1 B 274 MET THR SER ALA THR ALA SER PHE ALA THR ARG THR SER SEQRES 2 B 274 LEU ALA ALA ASP LEU ALA ALA LEU GLY LEU ALA TRP GLY SEQRES 3 B 274 ASP ALA ILE MET VAL HIS ALA ALA VAL SER ARG VAL GLY SEQRES 4 B 274 ARG LEU LEU ASP GLY PRO ASP THR ILE ILE ALA ALA LEU SEQRES 5 B 274 ARG ASP THR VAL GLY PRO GLY GLY THR VAL LEU ALA TYR SEQRES 6 B 274 ALA ASP TRP GLU ALA ARG TYR GLU ASP LEU VAL ASP ASP SEQRES 7 B 274 ALA GLY ARG VAL PRO PRO GLU TRP ARG GLU HIS VAL PRO SEQRES 8 B 274 PRO PHE ASP PRO GLN ARG SER ARG ALA ILE ARG ASP ASN SEQRES 9 B 274 GLY VAL LEU PRO GLU PHE LEU ARG THR THR PRO GLY THR SEQRES 10 B 274 LEU ARG SER GLY ASN PRO GLY ALA SER LEU VAL ALA LEU SEQRES 11 B 274 GLY ALA LYS ALA GLU TRP PHE THR ALA ASP HIS PRO LEU SEQRES 12 B 274 ASP TYR GLY TYR GLY GLU GLY SER PRO LEU ALA LYS LEU SEQRES 13 B 274 VAL GLU ALA GLY GLY LYS VAL LEU MET LEU GLY ALA PRO SEQRES 14 B 274 LEU ASP THR LEU THR LEU LEU HIS HIS ALA GLU HIS LEU SEQRES 15 B 274 ALA ASP ILE PRO GLY LYS ARG ILE LYS ARG ILE GLU VAL SEQRES 16 B 274 PRO PHE ALA THR PRO THR GLY THR GLN TRP ARG MET ILE SEQRES 17 B 274 GLU GLU PHE ASP THR GLY ASP PRO ILE VAL ALA GLY LEU SEQRES 18 B 274 ALA GLU ASP TYR PHE ALA GLY ILE VAL THR GLU PHE LEU SEQRES 19 B 274 ALA SER GLY GLN GLY ARG GLN GLY LEU ILE GLY ALA ALA SEQRES 20 B 274 PRO SER VAL LEU VAL ASP ALA ALA ALA ILE THR ALA PHE SEQRES 21 B 274 GLY VAL THR TRP LEU GLU LYS ARG PHE GLY THR PRO SER SEQRES 22 B 274 PRO HET CL A 301 1 HET CL B 301 1 HETNAM CL CHLORIDE ION FORMUL 3 CL 2(CL 1-) FORMUL 5 HOH *897(H2 O) HELIX 1 AA1 THR A 10 GLY A 22 1 13 HELIX 2 AA2 VAL A 35 GLY A 39 5 5 HELIX 3 AA3 GLY A 44 GLY A 57 1 14 HELIX 4 AA4 ALA A 70 VAL A 76 5 7 HELIX 5 AA5 PRO A 83 GLU A 88 1 6 HELIX 6 AA6 VAL A 106 THR A 113 1 8 HELIX 7 AA7 LYS A 133 ALA A 139 1 7 HELIX 8 AA8 SER A 151 ALA A 159 1 9 HELIX 9 AA9 PRO A 169 THR A 174 5 6 HELIX 10 AB1 LEU A 175 ALA A 183 1 9 HELIX 11 AB2 ASP A 224 SER A 236 1 13 HELIX 12 AB3 ALA A 254 GLY A 270 1 17 HELIX 13 AB4 THR B 10 GLY B 22 1 13 HELIX 14 AB5 VAL B 35 GLY B 39 5 5 HELIX 15 AB6 GLY B 44 GLY B 57 1 14 HELIX 16 AB7 ALA B 70 VAL B 76 5 7 HELIX 17 AB8 PRO B 83 GLU B 88 1 6 HELIX 18 AB9 VAL B 106 THR B 113 1 8 HELIX 19 AC1 LYS B 133 ALA B 139 1 7 HELIX 20 AC2 SER B 151 ALA B 159 1 9 HELIX 21 AC3 PRO B 169 THR B 174 5 6 HELIX 22 AC4 LEU B 175 ALA B 183 1 9 HELIX 23 AC5 ASP B 224 SER B 236 1 13 HELIX 24 AC6 ALA B 254 GLY B 270 1 17 SHEET 1 AA1 7 LEU A 118 ARG A 119 0 SHEET 2 AA1 7 LEU A 127 GLY A 131 -1 O ALA A 129 N LEU A 118 SHEET 3 AA1 7 THR A 61 TYR A 65 -1 N VAL A 62 O LEU A 130 SHEET 4 AA1 7 ALA A 28 ALA A 33 1 N ILE A 29 O THR A 61 SHEET 5 AA1 7 LYS A 162 LEU A 166 1 O LEU A 166 N HIS A 32 SHEET 6 AA1 7 ALA A 247 ASP A 253 -1 O VAL A 250 N MET A 165 SHEET 7 AA1 7 ARG A 240 ILE A 244 -1 N ARG A 240 O LEU A 251 SHEET 1 AA2 2 ILE A 190 PHE A 197 0 SHEET 2 AA2 2 GLN A 204 PHE A 211 -1 O GLU A 210 N LYS A 191 SHEET 1 AA3 7 LEU B 118 ARG B 119 0 SHEET 2 AA3 7 LEU B 127 GLY B 131 -1 O ALA B 129 N LEU B 118 SHEET 3 AA3 7 THR B 61 TYR B 65 -1 N VAL B 62 O LEU B 130 SHEET 4 AA3 7 ALA B 28 ALA B 33 1 N ILE B 29 O THR B 61 SHEET 5 AA3 7 LYS B 162 LEU B 166 1 O LEU B 166 N HIS B 32 SHEET 6 AA3 7 ALA B 247 ASP B 253 -1 O VAL B 250 N MET B 165 SHEET 7 AA3 7 ARG B 240 ILE B 244 -1 N ARG B 240 O LEU B 251 SHEET 1 AA4 2 ILE B 190 PHE B 197 0 SHEET 2 AA4 2 GLN B 204 PHE B 211 -1 O GLU B 210 N LYS B 191 CISPEP 1 PHE B 269 GLY B 270 0 10.03 SITE 1 AC1 4 PRO A 45 ARG B 102 HOH B 671 HOH B 699 SITE 1 AC2 5 ASN B 104 HOH B 575 HOH B 627 HOH B 645 SITE 2 AC2 5 HOH B 682 CRYST1 137.256 163.897 95.126 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007286 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006101 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010512 0.00000