data_6MC3 # _entry.id 6MC3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6MC3 pdb_00006mc3 10.2210/pdb6mc3/pdb WWPDB D_1000236597 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-11-14 2 'Structure model' 1 1 2018-12-12 3 'Structure model' 1 2 2019-11-27 4 'Structure model' 1 3 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' pdbx_audit_support 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 6 4 'Structure model' pdbx_struct_conn_angle 7 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.title' 5 3 'Structure model' '_pdbx_audit_support.funding_organization' 6 4 'Structure model' '_database_2.pdbx_DOI' 7 4 'Structure model' '_database_2.pdbx_database_accession' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.value' 26 4 'Structure model' '_struct_conn.pdbx_dist_value' 27 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 28 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 29 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 32 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 33 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 34 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 35 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 36 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 39 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6MC3 _pdbx_database_status.recvd_initial_deposition_date 2018-08-30 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Chu, B.' 1 0000-0002-9429-8893 'Paukstelis, P.J.' 2 0000-0001-8536-4361 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Am. Chem. Soc.' _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 140 _citation.language ? _citation.page_first 16291 _citation.page_last 16298 _citation.title 'Crystal Structure of a Tetrameric DNA Fold-Back Quadruplex.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.8b10153 _citation.pdbx_database_id_PubMed 30384604 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chu, B.' 1 ? primary 'Zhang, D.' 2 ? primary 'Hwang, W.' 3 ? primary 'Paukstelis, P.J.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*GP*TP*GP*AP*GP*GP*CP*G)-3') ; 2796.835 4 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 6 ? ? ? ? 3 water nat water 18.015 110 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DT)(DG)(DA)(DG)(DG)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGTGAGGCG _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DT n 1 4 DG n 1 5 DA n 1 6 DG n 1 7 DG n 1 8 DC n 1 9 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 9 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DT 3 3 3 DT DT A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DA 5 5 5 DA DA A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DG 7 7 7 DG DG A . n A 1 8 DC 8 8 8 DC DC A . n A 1 9 DG 9 9 9 DG DG A . n B 1 1 DC 1 1 1 DC DC B . n B 1 2 DG 2 2 2 DG DG B . n B 1 3 DT 3 3 3 DT DT B . n B 1 4 DG 4 4 4 DG DG B . n B 1 5 DA 5 5 5 DA DA B . n B 1 6 DG 6 6 6 DG DG B . n B 1 7 DG 7 7 7 DG DG B . n B 1 8 DC 8 8 8 DC DC B . n B 1 9 DG 9 9 9 DG DG B . n C 1 1 DC 1 1 1 DC DC C . n C 1 2 DG 2 2 2 DG DG C . n C 1 3 DT 3 3 3 DT DT C . n C 1 4 DG 4 4 4 DG DG C . n C 1 5 DA 5 5 5 DA DA C . n C 1 6 DG 6 6 6 DG DG C . n C 1 7 DG 7 7 7 DG DG C . n C 1 8 DC 8 8 8 DC DC C . n C 1 9 DG 9 9 9 DG DG C . n D 1 1 DC 1 1 1 DC DC D . n D 1 2 DG 2 2 2 DG DG D . n D 1 3 DT 3 3 3 DT DT D . n D 1 4 DG 4 4 4 DG DG D . n D 1 5 DA 5 5 5 DA DA D . n D 1 6 DG 6 6 6 DG DG D . n D 1 7 DG 7 7 7 DG DG D . n D 1 8 DC 8 8 8 DC DC D . n D 1 9 DG 9 9 9 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MG 1 101 4 MG MG A . F 2 MG 1 101 3 MG MG C . G 2 MG 1 101 1 MG MG D . H 2 MG 1 102 2 MG MG D . I 2 MG 1 103 5 MG MG D . J 2 MG 1 104 6 MG MG D . K 3 HOH 1 201 23 HOH HOH A . K 3 HOH 2 202 77 HOH HOH A . K 3 HOH 3 203 16 HOH HOH A . K 3 HOH 4 204 59 HOH HOH A . K 3 HOH 5 205 63 HOH HOH A . K 3 HOH 6 206 17 HOH HOH A . K 3 HOH 7 207 37 HOH HOH A . K 3 HOH 8 208 60 HOH HOH A . K 3 HOH 9 209 5 HOH HOH A . K 3 HOH 10 210 35 HOH HOH A . K 3 HOH 11 211 31 HOH HOH A . K 3 HOH 12 212 42 HOH HOH A . K 3 HOH 13 213 15 HOH HOH A . K 3 HOH 14 214 64 HOH HOH A . K 3 HOH 15 215 103 HOH HOH A . K 3 HOH 16 216 98 HOH HOH A . K 3 HOH 17 217 28 HOH HOH A . K 3 HOH 18 218 65 HOH HOH A . L 3 HOH 1 101 107 HOH HOH B . L 3 HOH 2 102 92 HOH HOH B . L 3 HOH 3 103 88 HOH HOH B . L 3 HOH 4 104 52 HOH HOH B . L 3 HOH 5 105 32 HOH HOH B . L 3 HOH 6 106 30 HOH HOH B . L 3 HOH 7 107 45 HOH HOH B . L 3 HOH 8 108 85 HOH HOH B . L 3 HOH 9 109 100 HOH HOH B . L 3 HOH 10 110 79 HOH HOH B . L 3 HOH 11 111 33 HOH HOH B . L 3 HOH 12 112 9 HOH HOH B . L 3 HOH 13 113 47 HOH HOH B . L 3 HOH 14 114 25 HOH HOH B . L 3 HOH 15 115 20 HOH HOH B . L 3 HOH 16 116 46 HOH HOH B . L 3 HOH 17 117 62 HOH HOH B . L 3 HOH 18 118 54 HOH HOH B . L 3 HOH 19 119 7 HOH HOH B . L 3 HOH 20 120 78 HOH HOH B . L 3 HOH 21 121 55 HOH HOH B . L 3 HOH 22 122 111 HOH HOH B . L 3 HOH 23 123 101 HOH HOH B . L 3 HOH 24 124 110 HOH HOH B . L 3 HOH 25 125 109 HOH HOH B . L 3 HOH 26 126 58 HOH HOH B . L 3 HOH 27 127 105 HOH HOH B . M 3 HOH 1 201 89 HOH HOH C . M 3 HOH 2 202 53 HOH HOH C . M 3 HOH 3 203 3 HOH HOH C . M 3 HOH 4 204 24 HOH HOH C . M 3 HOH 5 205 40 HOH HOH C . M 3 HOH 6 206 2 HOH HOH C . M 3 HOH 7 207 73 HOH HOH C . M 3 HOH 8 208 76 HOH HOH C . M 3 HOH 9 209 95 HOH HOH C . M 3 HOH 10 210 14 HOH HOH C . M 3 HOH 11 211 51 HOH HOH C . M 3 HOH 12 212 6 HOH HOH C . M 3 HOH 13 213 26 HOH HOH C . M 3 HOH 14 214 56 HOH HOH C . M 3 HOH 15 215 80 HOH HOH C . M 3 HOH 16 216 96 HOH HOH C . M 3 HOH 17 217 74 HOH HOH C . M 3 HOH 18 218 94 HOH HOH C . M 3 HOH 19 219 50 HOH HOH C . M 3 HOH 20 220 38 HOH HOH C . M 3 HOH 21 221 87 HOH HOH C . M 3 HOH 22 222 102 HOH HOH C . M 3 HOH 23 223 93 HOH HOH C . M 3 HOH 24 224 81 HOH HOH C . M 3 HOH 25 225 57 HOH HOH C . N 3 HOH 1 201 67 HOH HOH D . N 3 HOH 2 202 106 HOH HOH D . N 3 HOH 3 203 71 HOH HOH D . N 3 HOH 4 204 21 HOH HOH D . N 3 HOH 5 205 97 HOH HOH D . N 3 HOH 6 206 22 HOH HOH D . N 3 HOH 7 207 61 HOH HOH D . N 3 HOH 8 208 10 HOH HOH D . N 3 HOH 9 209 8 HOH HOH D . N 3 HOH 10 210 90 HOH HOH D . N 3 HOH 11 211 86 HOH HOH D . N 3 HOH 12 212 4 HOH HOH D . N 3 HOH 13 213 29 HOH HOH D . N 3 HOH 14 214 19 HOH HOH D . N 3 HOH 15 215 43 HOH HOH D . N 3 HOH 16 216 34 HOH HOH D . N 3 HOH 17 217 18 HOH HOH D . N 3 HOH 18 218 13 HOH HOH D . N 3 HOH 19 219 1 HOH HOH D . N 3 HOH 20 220 82 HOH HOH D . N 3 HOH 21 221 99 HOH HOH D . N 3 HOH 22 222 49 HOH HOH D . N 3 HOH 23 223 41 HOH HOH D . N 3 HOH 24 224 12 HOH HOH D . N 3 HOH 25 225 75 HOH HOH D . N 3 HOH 26 226 11 HOH HOH D . N 3 HOH 27 227 91 HOH HOH D . N 3 HOH 28 228 27 HOH HOH D . N 3 HOH 29 229 48 HOH HOH D . N 3 HOH 30 230 68 HOH HOH D . N 3 HOH 31 231 66 HOH HOH D . N 3 HOH 32 232 36 HOH HOH D . N 3 HOH 33 233 44 HOH HOH D . N 3 HOH 34 234 72 HOH HOH D . N 3 HOH 35 235 104 HOH HOH D . N 3 HOH 36 236 108 HOH HOH D . N 3 HOH 37 237 83 HOH HOH D . N 3 HOH 38 238 84 HOH HOH D . N 3 HOH 39 239 70 HOH HOH D . N 3 HOH 40 240 69 HOH HOH D . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0155 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6MC3 _cell.details ? _cell.formula_units_Z ? _cell.length_a 34.135 _cell.length_a_esd ? _cell.length_b 46.430 _cell.length_b_esd ? _cell.length_c 71.894 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MC3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 17 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6MC3 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.55 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 51.69 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.4 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '15% PEG400, 120 mM magnesium chloride, 30 mM sodium cacodylate, equilibrated against 20% PEG400' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-04-23 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.92 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 23-ID-D' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.92 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 23-ID-D _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6MC3 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.57 _reflns.d_resolution_low 28.42 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 16520 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.4 _reflns.pdbx_Rmerge_I_obs 0.082 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.036 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.57 _reflns_shell.d_res_low 1.60 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 802 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 3.668 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 1.531 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -1.77 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][2] -1.22 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 2.99 _refine.B_iso_max ? _refine.B_iso_mean 37.605 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.971 _refine.correlation_coeff_Fo_to_Fc_free 0.968 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6MC3 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.57 _refine.ls_d_res_low 28.42 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15701 _refine.ls_number_reflns_R_free 793 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.34 _refine.ls_percent_reflns_R_free 4.8 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.20272 _refine.ls_R_factor_R_free 0.24344 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.20042 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.112 _refine.pdbx_overall_ESU_R_Free 0.094 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 10.313 _refine.overall_SU_ML 0.138 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 744 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 110 _refine_hist.number_atoms_total 860 _refine_hist.d_res_high 1.57 _refine_hist.d_res_low 28.42 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.013 0.011 898 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.006 0.020 431 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.086 1.145 1392 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.968 3.000 1019 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.115 0.200 117 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.022 0.020 480 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 204 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 6.622 3.793 897 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 6.622 3.793 896 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 7.466 5.699 1392 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 8.322 35.772 1421 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 7.786 34.812 1377 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? 6.003 3.000 1328 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? 34.314 5.000 47 ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? 22.410 5.000 1296 ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.570 _refine_ls_shell.d_res_low 1.611 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 61 _refine_ls_shell.number_reflns_R_work 1133 _refine_ls_shell.percent_reflns_obs 99.17 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.389 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.388 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6MC3 _struct.title 'Crystal structure of a tetrameric DNA fold-back quadruplex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6MC3 _struct_keywords.text 'quadruplex, fold-back, hexad, non-canonical, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6MC3 _struct_ref.pdbx_db_accession 6MC3 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6MC3 A 1 ? 9 ? 6MC3 1 ? 9 ? 1 9 2 1 6MC3 B 1 ? 9 ? 6MC3 1 ? 9 ? 1 9 3 1 6MC3 C 1 ? 9 ? 6MC3 1 ? 9 ? 1 9 4 1 6MC3 D 1 ? 9 ? 6MC3 1 ? 9 ? 1 9 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3860 ? 1 MORE -31 ? 1 'SSA (A^2)' 5120 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support SAXS _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DT 3 OP1 ? ? ? 1_555 E MG . MG ? ? A DT 3 A MG 101 1_555 ? ? ? ? ? ? ? 2.252 ? ? metalc2 metalc ? ? A DA 5 OP1 A ? ? 1_555 E MG . MG ? ? A DA 5 A MG 101 1_555 ? ? ? ? ? ? ? 2.127 ? ? metalc3 metalc ? ? A DA 5 OP1 B ? ? 1_555 E MG . MG ? ? A DA 5 A MG 101 1_555 ? ? ? ? ? ? ? 2.190 ? ? metalc4 metalc ? ? E MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 101 A HOH 204 1_555 ? ? ? ? ? ? ? 2.524 ? ? metalc5 metalc ? ? K HOH . O ? ? ? 1_555 I MG . MG ? ? A HOH 205 D MG 103 1_555 ? ? ? ? ? ? ? 2.201 ? ? metalc6 metalc ? ? K HOH . O ? ? ? 1_555 G MG . MG ? ? A HOH 209 D MG 101 1_555 ? ? ? ? ? ? ? 2.042 ? ? metalc7 metalc ? ? K HOH . O ? ? ? 1_555 I MG . MG ? ? A HOH 214 D MG 103 1_555 ? ? ? ? ? ? ? 1.968 ? ? metalc8 metalc ? ? K HOH . O ? ? ? 1_555 I MG . MG ? ? A HOH 218 D MG 103 1_555 ? ? ? ? ? ? ? 2.226 ? ? metalc9 metalc ? ? L HOH . O ? ? ? 1_555 F MG . MG ? ? B HOH 118 C MG 101 1_555 ? ? ? ? ? ? ? 2.004 ? ? metalc10 metalc ? ? L HOH . O ? ? ? 1_555 G MG . MG ? ? B HOH 119 D MG 101 1_555 ? ? ? ? ? ? ? 2.159 ? ? metalc11 metalc ? ? L HOH . O ? ? ? 1_555 F MG . MG ? ? B HOH 121 C MG 101 1_555 ? ? ? ? ? ? ? 1.957 ? ? metalc12 metalc ? ? L HOH . O ? ? ? 1_555 F MG . MG ? ? B HOH 126 C MG 101 1_555 ? ? ? ? ? ? ? 1.951 ? ? metalc13 metalc ? ? F MG . MG ? ? ? 1_555 M HOH . O ? ? C MG 101 C HOH 202 1_555 ? ? ? ? ? ? ? 2.304 ? ? metalc14 metalc ? ? F MG . MG ? ? ? 1_555 M HOH . O ? ? C MG 101 C HOH 214 1_555 ? ? ? ? ? ? ? 2.060 ? ? metalc15 metalc ? ? F MG . MG ? ? ? 1_555 M HOH . O ? ? C MG 101 C HOH 225 1_555 ? ? ? ? ? ? ? 2.083 ? ? metalc16 metalc ? ? M HOH . O ? ? ? 1_555 G MG . MG ? ? C HOH 203 D MG 101 1_555 ? ? ? ? ? ? ? 1.906 ? ? metalc17 metalc ? ? M HOH . O ? ? ? 1_555 G MG . MG ? ? C HOH 212 D MG 101 1_555 ? ? ? ? ? ? ? 2.027 ? ? metalc18 metalc ? ? D DT 3 OP1 ? ? ? 1_555 H MG . MG ? ? D DT 3 D MG 102 1_555 ? ? ? ? ? ? ? 2.044 ? ? metalc19 metalc ? ? D DA 5 OP1 ? ? ? 1_555 H MG . MG ? ? D DA 5 D MG 102 1_555 ? ? ? ? ? ? ? 1.930 ? ? metalc20 metalc ? ? G MG . MG ? ? ? 1_555 N HOH . O ? ? D MG 101 D HOH 209 1_555 ? ? ? ? ? ? ? 2.217 ? ? metalc21 metalc ? ? G MG . MG ? ? ? 1_555 N HOH . O ? ? D MG 101 D HOH 212 1_555 ? ? ? ? ? ? ? 1.990 ? ? metalc22 metalc ? ? H MG . MG ? ? ? 1_555 N HOH . O ? ? D MG 102 D HOH 208 1_555 ? ? ? ? ? ? ? 2.003 ? ? metalc23 metalc ? ? H MG . MG ? ? ? 1_555 N HOH . O ? ? D MG 102 D HOH 218 1_555 ? ? ? ? ? ? ? 1.975 ? ? metalc24 metalc ? ? H MG . MG ? ? ? 1_555 N HOH . O ? ? D MG 102 D HOH 224 1_555 ? ? ? ? ? ? ? 2.124 ? ? metalc25 metalc ? ? H MG . MG ? ? ? 1_555 N HOH . O ? ? D MG 102 D HOH 226 1_555 ? ? ? ? ? ? ? 2.164 ? ? metalc26 metalc ? ? I MG . MG ? ? ? 1_555 N HOH . O ? ? D MG 103 D HOH 231 1_555 ? ? ? ? ? ? ? 2.028 ? ? metalc27 metalc ? ? J MG . MG ? ? ? 1_555 N HOH . O ? ? D MG 104 D HOH 201 1_555 ? ? ? ? ? ? ? 2.343 ? ? metalc28 metalc ? ? J MG . MG ? ? ? 1_555 N HOH . O ? ? D MG 104 D HOH 203 1_555 ? ? ? ? ? ? ? 1.985 ? ? metalc29 metalc ? ? J MG . MG ? ? ? 1_555 N HOH . O ? ? D MG 104 D HOH 230 1_555 ? ? ? ? ? ? ? 1.967 ? ? metalc30 metalc ? ? J MG . MG ? ? ? 1_555 N HOH . O ? ? D MG 104 D HOH 239 1_555 ? ? ? ? ? ? ? 2.241 ? ? metalc31 metalc ? ? J MG . MG ? ? ? 1_555 N HOH . O ? ? D MG 104 D HOH 240 1_555 ? ? ? ? ? ? ? 2.220 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 1 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 1 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 1 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DG 2 N3 ? ? A DG 2 B DG 2 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog5 hydrog ? ? A DG 2 N3 ? ? ? 1_555 B DG 2 N2 ? ? A DG 2 B DG 2 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog6 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DA 5 N7 ? ? A DG 2 B DA 5 1_555 ? ? ? ? ? ? TYPE_9_PAIR ? ? ? hydrog7 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DA 5 N6 ? ? A DG 2 B DA 5 1_555 ? ? ? ? ? ? TYPE_9_PAIR ? ? ? hydrog8 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DG 2 O6 ? ? A DA 5 B DG 2 1_555 ? ? ? ? ? ? TYPE_9_PAIR ? ? ? hydrog9 hydrog ? ? A DA 5 N7 ? ? ? 1_555 B DG 2 N1 ? ? A DA 5 B DG 2 1_555 ? ? ? ? ? ? TYPE_9_PAIR ? ? ? hydrog10 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 6 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 6 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 6 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DG 6 N3 ? ? A DG 6 B DG 6 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog14 hydrog ? ? A DG 6 N3 ? ? ? 1_555 B DG 6 N2 ? ? A DG 6 B DG 6 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog15 hydrog ? ? A DG 6 N7 ? ? ? 1_555 D DG 9 N1 ? ? A DG 6 D DG 9 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog16 hydrog ? ? A DG 6 O6 ? ? ? 1_555 D DG 9 N2 ? ? A DG 6 D DG 9 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog17 hydrog ? ? A DG 7 N1 ? ? ? 1_555 C DC 8 N3 ? ? A DG 7 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 7 N2 ? ? ? 1_555 C DC 8 O2 ? ? A DG 7 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 7 O6 ? ? ? 1_555 C DC 8 N4 ? ? A DG 7 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 N3 ? ? ? 1_555 C DG 7 N1 ? ? A DC 8 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 8 N4 ? ? ? 1_555 C DG 7 O6 ? ? A DC 8 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 8 O2 ? ? ? 1_555 C DG 7 N2 ? ? A DC 8 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 9 N1 ? ? ? 1_555 D DG 6 N7 ? ? A DG 9 D DG 6 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog24 hydrog ? ? A DG 9 N2 ? ? ? 1_555 D DG 6 O6 ? ? A DG 9 D DG 6 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog25 hydrog ? ? B DG 6 N7 ? ? ? 1_555 C DG 9 N1 ? ? B DG 6 C DG 9 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog26 hydrog ? ? B DG 6 O6 ? ? ? 1_555 C DG 9 N2 ? ? B DG 6 C DG 9 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog27 hydrog ? ? B DG 7 N1 ? ? ? 1_555 D DC 8 N3 ? ? B DG 7 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DG 7 N2 ? ? ? 1_555 D DC 8 O2 ? ? B DG 7 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DG 7 O6 ? ? ? 1_555 D DC 8 N4 ? ? B DG 7 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DC 8 N3 ? ? ? 1_555 D DG 7 N1 ? ? B DC 8 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DC 8 N4 ? ? ? 1_555 D DG 7 O6 ? ? B DC 8 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 8 O2 ? ? ? 1_555 D DG 7 N2 ? ? B DC 8 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DG 9 N1 ? ? ? 1_555 C DG 6 N7 ? ? B DG 9 C DG 6 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog34 hydrog ? ? B DG 9 N2 ? ? ? 1_555 C DG 6 O6 ? ? B DG 9 C DG 6 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog35 hydrog ? ? C DC 1 N3 ? ? ? 1_555 D DG 6 N1 ? ? C DC 1 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DC 1 N4 ? ? ? 1_555 D DG 6 O6 ? ? C DC 1 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DC 1 O2 ? ? ? 1_555 D DG 6 N2 ? ? C DC 1 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DG 2 N2 ? ? ? 1_555 D DG 2 N3 ? ? C DG 2 D DG 2 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog39 hydrog ? ? C DG 2 N3 ? ? ? 1_555 D DG 2 N2 ? ? C DG 2 D DG 2 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog40 hydrog ? ? C DG 2 N1 ? ? ? 1_555 D DA 5 N7 ? ? C DG 2 D DA 5 1_555 ? ? ? ? ? ? TYPE_9_PAIR ? ? ? hydrog41 hydrog ? ? C DG 2 O6 ? ? ? 1_555 D DA 5 N6 ? ? C DG 2 D DA 5 1_555 ? ? ? ? ? ? TYPE_9_PAIR ? ? ? hydrog42 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DG 2 O6 ? ? C DA 5 D DG 2 1_555 ? ? ? ? ? ? TYPE_9_PAIR ? ? ? hydrog43 hydrog ? ? C DA 5 N7 ? ? ? 1_555 D DG 2 N1 ? ? C DA 5 D DG 2 1_555 ? ? ? ? ? ? TYPE_9_PAIR ? ? ? hydrog44 hydrog ? ? C DG 6 N1 ? ? ? 1_555 D DC 1 N3 ? ? C DG 6 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DG 6 N2 ? ? ? 1_555 D DC 1 O2 ? ? C DG 6 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DG 6 O6 ? ? ? 1_555 D DC 1 N4 ? ? C DG 6 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C DG 6 N2 ? ? ? 1_555 D DG 6 N3 ? ? C DG 6 D DG 6 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog48 hydrog ? ? C DG 6 N3 ? ? ? 1_555 D DG 6 N2 ? ? C DG 6 D DG 6 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? A DT 3 ? A DT 3 ? 1_555 MG ? E MG . ? A MG 101 ? 1_555 OP1 A A DA 5 ? A DA 5 ? 1_555 122.8 ? 2 OP1 ? A DT 3 ? A DT 3 ? 1_555 MG ? E MG . ? A MG 101 ? 1_555 OP1 B A DA 5 ? A DA 5 ? 1_555 108.2 ? 3 OP1 A A DA 5 ? A DA 5 ? 1_555 MG ? E MG . ? A MG 101 ? 1_555 OP1 B A DA 5 ? A DA 5 ? 1_555 57.2 ? 4 OP1 ? A DT 3 ? A DT 3 ? 1_555 MG ? E MG . ? A MG 101 ? 1_555 O ? K HOH . ? A HOH 204 ? 1_555 91.8 ? 5 OP1 A A DA 5 ? A DA 5 ? 1_555 MG ? E MG . ? A MG 101 ? 1_555 O ? K HOH . ? A HOH 204 ? 1_555 122.6 ? 6 OP1 B A DA 5 ? A DA 5 ? 1_555 MG ? E MG . ? A MG 101 ? 1_555 O ? K HOH . ? A HOH 204 ? 1_555 69.7 ? 7 O ? K HOH . ? A HOH 205 ? 1_555 MG ? I MG . ? D MG 103 ? 1_555 O ? K HOH . ? A HOH 214 ? 1_555 80.6 ? 8 O ? K HOH . ? A HOH 205 ? 1_555 MG ? I MG . ? D MG 103 ? 1_555 O ? K HOH . ? A HOH 218 ? 1_555 74.8 ? 9 O ? K HOH . ? A HOH 214 ? 1_555 MG ? I MG . ? D MG 103 ? 1_555 O ? K HOH . ? A HOH 218 ? 1_555 76.4 ? 10 O ? K HOH . ? A HOH 205 ? 1_555 MG ? I MG . ? D MG 103 ? 1_555 O ? N HOH . ? D HOH 231 ? 1_555 108.4 ? 11 O ? K HOH . ? A HOH 214 ? 1_555 MG ? I MG . ? D MG 103 ? 1_555 O ? N HOH . ? D HOH 231 ? 1_555 88.2 ? 12 O ? K HOH . ? A HOH 218 ? 1_555 MG ? I MG . ? D MG 103 ? 1_555 O ? N HOH . ? D HOH 231 ? 1_555 163.6 ? 13 O ? K HOH . ? A HOH 209 ? 1_555 MG ? G MG . ? D MG 101 ? 1_555 O ? L HOH . ? B HOH 119 ? 1_555 84.1 ? 14 O ? K HOH . ? A HOH 209 ? 1_555 MG ? G MG . ? D MG 101 ? 1_555 O ? M HOH . ? C HOH 203 ? 1_555 90.6 ? 15 O ? L HOH . ? B HOH 119 ? 1_555 MG ? G MG . ? D MG 101 ? 1_555 O ? M HOH . ? C HOH 203 ? 1_555 87.5 ? 16 O ? K HOH . ? A HOH 209 ? 1_555 MG ? G MG . ? D MG 101 ? 1_555 O ? M HOH . ? C HOH 212 ? 1_555 103.9 ? 17 O ? L HOH . ? B HOH 119 ? 1_555 MG ? G MG . ? D MG 101 ? 1_555 O ? M HOH . ? C HOH 212 ? 1_555 171.5 ? 18 O ? M HOH . ? C HOH 203 ? 1_555 MG ? G MG . ? D MG 101 ? 1_555 O ? M HOH . ? C HOH 212 ? 1_555 95.4 ? 19 O ? K HOH . ? A HOH 209 ? 1_555 MG ? G MG . ? D MG 101 ? 1_555 O ? N HOH . ? D HOH 209 ? 1_555 172.2 ? 20 O ? L HOH . ? B HOH 119 ? 1_555 MG ? G MG . ? D MG 101 ? 1_555 O ? N HOH . ? D HOH 209 ? 1_555 88.3 ? 21 O ? M HOH . ? C HOH 203 ? 1_555 MG ? G MG . ? D MG 101 ? 1_555 O ? N HOH . ? D HOH 209 ? 1_555 90.9 ? 22 O ? M HOH . ? C HOH 212 ? 1_555 MG ? G MG . ? D MG 101 ? 1_555 O ? N HOH . ? D HOH 209 ? 1_555 83.6 ? 23 O ? K HOH . ? A HOH 209 ? 1_555 MG ? G MG . ? D MG 101 ? 1_555 O ? N HOH . ? D HOH 212 ? 1_555 79.4 ? 24 O ? L HOH . ? B HOH 119 ? 1_555 MG ? G MG . ? D MG 101 ? 1_555 O ? N HOH . ? D HOH 212 ? 1_555 89.3 ? 25 O ? M HOH . ? C HOH 203 ? 1_555 MG ? G MG . ? D MG 101 ? 1_555 O ? N HOH . ? D HOH 212 ? 1_555 169.8 ? 26 O ? M HOH . ? C HOH 212 ? 1_555 MG ? G MG . ? D MG 101 ? 1_555 O ? N HOH . ? D HOH 212 ? 1_555 89.2 ? 27 O ? N HOH . ? D HOH 209 ? 1_555 MG ? G MG . ? D MG 101 ? 1_555 O ? N HOH . ? D HOH 212 ? 1_555 98.7 ? 28 O ? L HOH . ? B HOH 118 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? L HOH . ? B HOH 121 ? 1_555 86.7 ? 29 O ? L HOH . ? B HOH 118 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? L HOH . ? B HOH 126 ? 1_555 89.5 ? 30 O ? L HOH . ? B HOH 121 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? L HOH . ? B HOH 126 ? 1_555 82.3 ? 31 O ? L HOH . ? B HOH 118 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? M HOH . ? C HOH 202 ? 1_555 82.0 ? 32 O ? L HOH . ? B HOH 121 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? M HOH . ? C HOH 202 ? 1_555 102.5 ? 33 O ? L HOH . ? B HOH 126 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? M HOH . ? C HOH 202 ? 1_555 170.0 ? 34 O ? L HOH . ? B HOH 118 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? M HOH . ? C HOH 214 ? 1_555 91.0 ? 35 O ? L HOH . ? B HOH 121 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? M HOH . ? C HOH 214 ? 1_555 167.3 ? 36 O ? L HOH . ? B HOH 126 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? M HOH . ? C HOH 214 ? 1_555 85.1 ? 37 O ? M HOH . ? C HOH 202 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? M HOH . ? C HOH 214 ? 1_555 89.6 ? 38 O ? L HOH . ? B HOH 118 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? M HOH . ? C HOH 225 ? 1_555 171.5 ? 39 O ? L HOH . ? B HOH 121 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? M HOH . ? C HOH 225 ? 1_555 84.7 ? 40 O ? L HOH . ? B HOH 126 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? M HOH . ? C HOH 225 ? 1_555 89.0 ? 41 O ? M HOH . ? C HOH 202 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? M HOH . ? C HOH 225 ? 1_555 100.1 ? 42 O ? M HOH . ? C HOH 214 ? 1_555 MG ? F MG . ? C MG 101 ? 1_555 O ? M HOH . ? C HOH 225 ? 1_555 97.3 ? 43 OP1 ? D DT 3 ? D DT 3 ? 1_555 MG ? H MG . ? D MG 102 ? 1_555 OP1 ? D DA 5 ? D DA 5 ? 1_555 95.0 ? 44 OP1 ? D DT 3 ? D DT 3 ? 1_555 MG ? H MG . ? D MG 102 ? 1_555 O ? N HOH . ? D HOH 208 ? 1_555 93.5 ? 45 OP1 ? D DA 5 ? D DA 5 ? 1_555 MG ? H MG . ? D MG 102 ? 1_555 O ? N HOH . ? D HOH 208 ? 1_555 83.7 ? 46 OP1 ? D DT 3 ? D DT 3 ? 1_555 MG ? H MG . ? D MG 102 ? 1_555 O ? N HOH . ? D HOH 218 ? 1_555 174.0 ? 47 OP1 ? D DA 5 ? D DA 5 ? 1_555 MG ? H MG . ? D MG 102 ? 1_555 O ? N HOH . ? D HOH 218 ? 1_555 91.0 ? 48 O ? N HOH . ? D HOH 208 ? 1_555 MG ? H MG . ? D MG 102 ? 1_555 O ? N HOH . ? D HOH 218 ? 1_555 86.8 ? 49 OP1 ? D DT 3 ? D DT 3 ? 1_555 MG ? H MG . ? D MG 102 ? 1_555 O ? N HOH . ? D HOH 224 ? 1_555 87.4 ? 50 OP1 ? D DA 5 ? D DA 5 ? 1_555 MG ? H MG . ? D MG 102 ? 1_555 O ? N HOH . ? D HOH 224 ? 1_555 93.1 ? 51 O ? N HOH . ? D HOH 208 ? 1_555 MG ? H MG . ? D MG 102 ? 1_555 O ? N HOH . ? D HOH 224 ? 1_555 176.7 ? 52 O ? N HOH . ? D HOH 218 ? 1_555 MG ? H MG . ? D MG 102 ? 1_555 O ? N HOH . ? D HOH 224 ? 1_555 92.6 ? 53 OP1 ? D DT 3 ? D DT 3 ? 1_555 MG ? H MG . ? D MG 102 ? 1_555 O ? N HOH . ? D HOH 226 ? 1_555 89.2 ? 54 OP1 ? D DA 5 ? D DA 5 ? 1_555 MG ? H MG . ? D MG 102 ? 1_555 O ? N HOH . ? D HOH 226 ? 1_555 173.0 ? 55 O ? N HOH . ? D HOH 208 ? 1_555 MG ? H MG . ? D MG 102 ? 1_555 O ? N HOH . ? D HOH 226 ? 1_555 90.4 ? 56 O ? N HOH . ? D HOH 218 ? 1_555 MG ? H MG . ? D MG 102 ? 1_555 O ? N HOH . ? D HOH 226 ? 1_555 84.8 ? 57 O ? N HOH . ? D HOH 224 ? 1_555 MG ? H MG . ? D MG 102 ? 1_555 O ? N HOH . ? D HOH 226 ? 1_555 92.7 ? 58 O ? N HOH . ? D HOH 201 ? 1_555 MG ? J MG . ? D MG 104 ? 1_555 O ? N HOH . ? D HOH 203 ? 1_555 80.2 ? 59 O ? N HOH . ? D HOH 201 ? 1_555 MG ? J MG . ? D MG 104 ? 1_555 O ? N HOH . ? D HOH 230 ? 1_555 119.2 ? 60 O ? N HOH . ? D HOH 203 ? 1_555 MG ? J MG . ? D MG 104 ? 1_555 O ? N HOH . ? D HOH 230 ? 1_555 71.5 ? 61 O ? N HOH . ? D HOH 201 ? 1_555 MG ? J MG . ? D MG 104 ? 1_555 O ? N HOH . ? D HOH 239 ? 1_555 69.7 ? 62 O ? N HOH . ? D HOH 203 ? 1_555 MG ? J MG . ? D MG 104 ? 1_555 O ? N HOH . ? D HOH 239 ? 1_555 116.8 ? 63 O ? N HOH . ? D HOH 230 ? 1_555 MG ? J MG . ? D MG 104 ? 1_555 O ? N HOH . ? D HOH 239 ? 1_555 169.6 ? 64 O ? N HOH . ? D HOH 201 ? 1_555 MG ? J MG . ? D MG 104 ? 1_555 O ? N HOH . ? D HOH 240 ? 1_555 93.9 ? 65 O ? N HOH . ? D HOH 203 ? 1_555 MG ? J MG . ? D MG 104 ? 1_555 O ? N HOH . ? D HOH 240 ? 1_555 146.3 ? 66 O ? N HOH . ? D HOH 230 ? 1_555 MG ? J MG . ? D MG 104 ? 1_555 O ? N HOH . ? D HOH 240 ? 1_555 83.2 ? 67 O ? N HOH . ? D HOH 239 ? 1_555 MG ? J MG . ? D MG 104 ? 1_555 O ? N HOH . ? D HOH 240 ? 1_555 91.3 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 101 ? 4 'binding site for residue MG A 101' AC2 Software C MG 101 ? 6 'binding site for residue MG C 101' AC3 Software D MG 101 ? 6 'binding site for residue MG D 101' AC4 Software D MG 102 ? 6 'binding site for residue MG D 102' AC5 Software D MG 103 ? 5 'binding site for residue MG D 103' AC6 Software D MG 104 ? 5 'binding site for residue MG D 104' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 DT A 3 ? DT A 3 . ? 1_555 ? 2 AC1 4 DG A 4 ? DG A 4 . ? 1_555 ? 3 AC1 4 DA A 5 ? DA A 5 . ? 1_555 ? 4 AC1 4 HOH K . ? HOH A 204 . ? 1_555 ? 5 AC2 6 HOH L . ? HOH B 118 . ? 1_555 ? 6 AC2 6 HOH L . ? HOH B 121 . ? 1_555 ? 7 AC2 6 HOH L . ? HOH B 126 . ? 1_555 ? 8 AC2 6 HOH M . ? HOH C 202 . ? 1_555 ? 9 AC2 6 HOH M . ? HOH C 214 . ? 1_555 ? 10 AC2 6 HOH M . ? HOH C 225 . ? 1_555 ? 11 AC3 6 HOH K . ? HOH A 209 . ? 1_555 ? 12 AC3 6 HOH L . ? HOH B 119 . ? 1_555 ? 13 AC3 6 HOH M . ? HOH C 203 . ? 1_555 ? 14 AC3 6 HOH M . ? HOH C 212 . ? 1_555 ? 15 AC3 6 HOH N . ? HOH D 209 . ? 1_555 ? 16 AC3 6 HOH N . ? HOH D 212 . ? 1_555 ? 17 AC4 6 DT D 3 ? DT D 3 . ? 1_555 ? 18 AC4 6 DA D 5 ? DA D 5 . ? 1_555 ? 19 AC4 6 HOH N . ? HOH D 208 . ? 1_555 ? 20 AC4 6 HOH N . ? HOH D 218 . ? 1_555 ? 21 AC4 6 HOH N . ? HOH D 224 . ? 1_555 ? 22 AC4 6 HOH N . ? HOH D 226 . ? 1_555 ? 23 AC5 5 HOH K . ? HOH A 205 . ? 1_555 ? 24 AC5 5 HOH K . ? HOH A 214 . ? 1_555 ? 25 AC5 5 HOH K . ? HOH A 218 . ? 1_555 ? 26 AC5 5 DG D 6 ? DG D 6 . ? 1_555 ? 27 AC5 5 HOH N . ? HOH D 231 . ? 1_555 ? 28 AC6 5 HOH N . ? HOH D 201 . ? 1_555 ? 29 AC6 5 HOH N . ? HOH D 203 . ? 1_555 ? 30 AC6 5 HOH N . ? HOH D 230 . ? 1_555 ? 31 AC6 5 HOH N . ? HOH D 239 . ? 1_555 ? 32 AC6 5 HOH N . ? HOH D 240 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 123 ? ? O C HOH 218 ? ? 1.78 2 1 O B HOH 123 ? ? O C HOH 216 ? ? 1.85 3 1 OP1 C DG 7 ? ? O C HOH 201 ? ? 1.85 4 1 OP1 B DT 3 ? B O B HOH 101 ? ? 1.89 5 1 O B HOH 101 ? ? O B HOH 103 ? ? 2.09 6 1 OP1 B DT 3 ? A O B HOH 101 ? ? 2.09 7 1 O C HOH 215 ? ? O C HOH 224 ? ? 2.10 8 1 O B HOH 110 ? ? O C HOH 215 ? ? 2.12 9 1 OP1 D DG 6 ? ? O D HOH 201 ? ? 2.14 10 1 O B HOH 117 ? ? O B HOH 123 ? ? 2.16 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" B DA 5 ? ? P B DG 6 ? ? 1.528 1.607 -0.079 0.012 Y 2 1 "O3'" D DA 5 ? ? P D DG 6 ? ? 1.685 1.607 0.078 0.012 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" A DT 3 ? ? P A DT 3 ? ? OP1 A DT 3 ? ? 98.60 105.70 -7.10 0.90 N 2 1 "O5'" A DT 3 ? ? P A DT 3 ? ? OP2 A DT 3 ? ? 119.11 110.70 8.41 1.20 N 3 1 "O5'" A DG 4 ? B P A DG 4 ? B OP2 A DG 4 ? B 98.76 105.70 -6.94 0.90 N 4 1 "O5'" B DG 4 ? A "C5'" B DG 4 ? A "C4'" B DG 4 ? A 97.71 109.40 -11.69 0.80 N # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 B HOH 122 ? L HOH . 2 1 B HOH 125 ? L HOH . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 MG MG MG N N 147 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 # _ndb_struct_conf_na.entry_id 6MC3 _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 5 1_555 A DG 2 1_555 0.242 -5.188 -0.251 -6.303 4.028 82.217 1 B_DA5:DG2_A B 5 ? A 2 ? 9 3 1 B DG 6 1_555 A DC 1 1_555 -0.128 -0.103 0.564 11.917 -3.804 -1.615 2 B_DG6:DC1_A B 6 ? A 1 ? 19 1 1 C DC 8 1_555 A DG 7 1_555 0.340 -0.132 -0.317 14.681 -6.607 1.372 3 C_DC8:DG7_A C 8 ? A 7 ? 19 1 1 C DG 7 1_555 A DC 8 1_555 -0.387 -0.083 -0.215 -18.917 -10.049 -2.432 4 C_DG7:DC8_A C 7 ? A 8 ? 19 1 1 C DC 1 1_555 D DG 6 1_555 0.081 -0.178 0.319 -5.904 0.819 -2.362 5 C_DC1:DG6_D C 1 ? D 6 ? 19 1 1 C DG 2 1_555 D DA 5 1_555 -0.338 4.860 -0.319 22.123 -4.548 -83.849 6 C_DG2:DA5_D C 2 ? D 5 ? 9 3 1 A DA 5 1_555 B DG 2 1_555 0.293 -4.803 0.486 -13.122 1.895 85.204 7 A_DA5:DG2_B A 5 ? B 2 ? 9 3 1 A DG 6 1_555 B DC 1 1_555 -0.097 -0.072 0.294 7.467 0.526 -0.804 8 A_DG6:DC1_B A 6 ? B 1 ? 19 1 1 D DC 8 1_555 B DG 7 1_555 0.237 -0.211 0.041 11.986 -9.594 -3.287 9 D_DC8:DG7_B D 8 ? B 7 ? 19 1 1 D DG 7 1_555 B DC 8 1_555 -0.374 -0.203 0.097 -3.021 0.417 -1.170 10 D_DG7:DC8_B D 7 ? B 8 ? 19 1 1 D DC 1 1_555 C DG 6 1_555 0.094 -0.160 0.007 -3.521 -2.843 -2.128 11 D_DC1:DG6_C D 1 ? C 6 ? 19 1 1 D DG 2 1_555 C DA 5 1_555 -0.285 4.840 -0.157 13.660 -10.436 -85.117 12 D_DG2:DA5_C D 2 ? C 5 ? 9 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DA 5 1_555 A DG 2 1_555 B DG 6 1_555 A DC 1 1_555 -0.974 -2.677 -2.542 147.032 -95.492 99.964 -1.743 -0.135 -1.535 -48.044 -73.975 176.991 1 BB_DA5DG6:DC1DG2_AA B 5 ? A 2 ? B 6 ? A 1 ? 1 B DG 6 1_555 A DC 1 1_555 C DC 8 1_555 A DG 7 1_555 -3.202 4.947 0.254 45.372 171.869 -5.038 -0.763 -2.053 -3.951 -86.971 22.960 -177.759 2 BC_DG6DC8:DG7DC1_AA B 6 ? A 1 ? C 8 ? A 7 ? 1 C DC 8 1_555 A DG 7 1_555 C DG 7 1_555 A DC 8 1_555 -0.482 -1.688 -2.893 -0.702 -0.275 -42.817 2.287 -0.598 -2.911 0.377 -0.962 -42.824 3 CC_DC8DG7:DC8DG7_AA C 8 ? A 7 ? C 7 ? A 8 ? 1 C DG 7 1_555 A DC 8 1_555 C DC 1 1_555 D DG 6 1_555 -3.517 -2.021 -3.849 48.472 -164.330 175.489 -1.083 1.737 -3.809 -82.168 -24.237 179.659 4 CC_DG7DC1:DG6DC8_DA C 7 ? A 8 ? C 1 ? D 6 ? 1 C DC 1 1_555 D DG 6 1_555 C DG 2 1_555 D DA 5 1_555 1.238 -2.173 3.200 -3.294 2.686 65.867 -2.099 -1.264 3.061 2.468 3.026 65.988 5 CC_DC1DG2:DA5DG6_DD C 1 ? D 6 ? C 2 ? D 5 ? 1 A DA 5 1_555 B DG 2 1_555 A DG 6 1_555 B DC 1 1_555 0.005 -3.746 -1.368 145.738 -95.102 157.150 -1.936 -0.099 -0.936 -47.583 -72.919 178.817 6 AA_DA5DG6:DC1DG2_BB A 5 ? B 2 ? A 6 ? B 1 ? 1 A DG 6 1_555 B DC 1 1_555 D DC 8 1_555 B DG 7 1_555 4.078 0.381 -3.377 -46.105 -167.616 116.546 -0.769 -1.776 -3.635 -84.251 23.175 176.762 7 AD_DG6DC8:DG7DC1_BB A 6 ? B 1 ? D 8 ? B 7 ? 1 D DC 8 1_555 B DG 7 1_555 D DG 7 1_555 B DC 8 1_555 0.003 -2.431 -3.818 -1.877 -5.547 -42.550 2.654 0.229 -4.085 7.600 -2.572 -42.932 8 DD_DC8DG7:DC8DG7_BB D 8 ? B 7 ? D 7 ? B 8 ? 1 D DG 7 1_555 B DC 8 1_555 D DC 1 1_555 C DG 6 1_555 -3.867 1.016 -3.262 46.206 -172.523 109.636 -0.575 1.644 -3.808 -86.385 -23.136 179.195 9 DD_DG7DC1:DG6DC8_CB D 7 ? B 8 ? D 1 ? C 6 ? 1 D DC 1 1_555 C DG 6 1_555 D DG 2 1_555 C DA 5 1_555 1.533 -1.853 3.005 1.135 8.895 67.477 -1.957 -1.333 2.794 7.971 -1.017 68.000 10 DD_DC1DG2:DA5DG6_CC D 1 ? C 6 ? D 2 ? C 5 ? # _pdbx_audit_support.funding_organization 'National Science Foundation (NSF, United States)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 1149665 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 6MC3 _atom_sites.fract_transf_matrix[1][1] 0.029295 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021538 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013909 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P # loop_