HEADER PROTEIN BINDING 30-AUG-18 6MC9 TITLE CRYSTAL STRUCTURE OF HUMAN NAV1.4 C-TERMINAL (1599-1754) DOMAIN IN TITLE 2 COMPLEX WITH CALCIUM-BOUND CALMODULIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SODIUM CHANNEL PROTEIN TYPE 4 SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SKM1,SODIUM CHANNEL PROTEIN SKELETAL MUSCLE SUBUNIT ALPHA, COMPND 5 SODIUM CHANNEL PROTEIN TYPE IV SUBUNIT ALPHA,VOLTAGE-GATED SODIUM COMPND 6 CHANNEL SUBUNIT ALPHA NAV1.4; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: CALMODULIN-1; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SCN4A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 13 ORGANISM_COMMON: RAT; SOURCE 14 ORGANISM_TAXID: 10116; SOURCE 15 GENE: CALM1, CALM, CAM, CAM1, CAMI; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PET24 KEYWDS SCN4A, VOLTAGE GATED SODIUM CHANNEL, CALMODULIN, CALMODULIN-BINDING KEYWDS 2 PROTEIN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.B.YODER,S.B.GABELLI,L.M.AMZEL REVDAT 4 11-OCT-23 6MC9 1 REMARK REVDAT 3 04-DEC-19 6MC9 1 REMARK REVDAT 2 17-APR-19 6MC9 1 JRNL REVDAT 1 10-APR-19 6MC9 0 JRNL AUTH J.B.YODER,M.BEN-JOHNY,F.FARINELLI,L.SRINIVASAN, JRNL AUTH 2 S.R.SHOEMAKER,G.F.TOMASELLI,S.B.GABELLI,L.M.AMZEL JRNL TITL CA2+-DEPENDENT REGULATION OF SODIUM CHANNELS NAV1.4 AND JRNL TITL 2 NAV1.5 IS CONTROLLED BY THE POST-IQ MOTIF. JRNL REF NAT COMMUN V. 10 1514 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 30944319 JRNL DOI 10.1038/S41467-019-09570-7 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.940 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 10333 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.242 REMARK 3 R VALUE (WORKING SET) : 0.240 REMARK 3 FREE R VALUE : 0.285 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 513 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.8320 - 5.2357 1.00 2456 127 0.2226 0.2757 REMARK 3 2 5.2357 - 4.1571 1.00 2464 127 0.2322 0.2683 REMARK 3 3 4.1571 - 3.6320 1.00 2451 130 0.2642 0.2670 REMARK 3 4 3.6320 - 3.3001 1.00 2449 129 0.3261 0.4396 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.710 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.280 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 128.2 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 145.5 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 7 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.5695 -4.0074 25.0058 REMARK 3 T TENSOR REMARK 3 T11: 0.8311 T22: 1.1891 REMARK 3 T33: 1.4246 T12: -0.0196 REMARK 3 T13: 0.0879 T23: -0.2321 REMARK 3 L TENSOR REMARK 3 L11: 5.4977 L22: 4.6036 REMARK 3 L33: 4.4991 L12: -1.7303 REMARK 3 L13: 0.5308 L23: 2.8269 REMARK 3 S TENSOR REMARK 3 S11: 0.4280 S12: 0.5283 S13: 0.8871 REMARK 3 S21: 0.5850 S22: 0.5021 S23: -1.5969 REMARK 3 S31: -0.3711 S32: 0.7409 S33: -1.0230 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 80 THROUGH 147 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.5679 -8.7389 18.2320 REMARK 3 T TENSOR REMARK 3 T11: 1.1037 T22: 0.9669 REMARK 3 T33: 1.0876 T12: 0.1528 REMARK 3 T13: 0.0510 T23: -0.1995 REMARK 3 L TENSOR REMARK 3 L11: 5.9820 L22: 6.7526 REMARK 3 L33: 4.3850 L12: 1.9077 REMARK 3 L13: 3.5848 L23: -0.8548 REMARK 3 S TENSOR REMARK 3 S11: 0.0185 S12: -0.0694 S13: 1.1013 REMARK 3 S21: -0.2226 S22: -0.5220 S23: 0.8696 REMARK 3 S31: -0.0131 S32: -0.2525 S33: 0.4259 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1611 THROUGH 1711) REMARK 3 ORIGIN FOR THE GROUP (A): 12.4674 22.9458 24.3404 REMARK 3 T TENSOR REMARK 3 T11: 2.1244 T22: 0.9824 REMARK 3 T33: 1.5746 T12: -0.2482 REMARK 3 T13: -0.7745 T23: 0.0186 REMARK 3 L TENSOR REMARK 3 L11: 4.4138 L22: 3.3169 REMARK 3 L33: 6.0719 L12: -2.9263 REMARK 3 L13: -4.3212 L23: 2.2169 REMARK 3 S TENSOR REMARK 3 S11: -0.9746 S12: 1.1946 S13: 1.4111 REMARK 3 S21: -1.8862 S22: 0.1922 S23: 0.9377 REMARK 3 S31: -0.5831 S32: -0.7383 S33: 0.7348 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1717 THROUGH 1760) REMARK 3 ORIGIN FOR THE GROUP (A): 4.8344 -12.1137 8.2506 REMARK 3 T TENSOR REMARK 3 T11: 1.2355 T22: 1.1257 REMARK 3 T33: 0.8209 T12: -0.1047 REMARK 3 T13: -0.0436 T23: -0.2980 REMARK 3 L TENSOR REMARK 3 L11: 7.1395 L22: 2.7723 REMARK 3 L33: 6.0291 L12: 2.8765 REMARK 3 L13: 0.4991 L23: 1.4636 REMARK 3 S TENSOR REMARK 3 S11: -0.2510 S12: 1.0797 S13: -1.1818 REMARK 3 S21: 0.5440 S22: -0.1420 S23: -0.1424 REMARK 3 S31: 0.7138 S32: -0.3430 S33: 0.3690 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6MC9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1000236574. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : VDCM SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5845 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 40.829 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 24.82 REMARK 200 R MERGE (I) : 0.11900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.1100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 24.87 REMARK 200 R MERGE FOR SHELL (I) : 1.84100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.080 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3G43 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES PH 6.0, 20% PEG 6000, 1.0M REMARK 280 LICL, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.33050 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 36.30750 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 36.30750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 100.99575 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 36.30750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 36.30750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 33.66525 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 36.30750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 36.30750 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 100.99575 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 36.30750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.30750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 33.66525 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 67.33050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -69.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1594 REMARK 465 PRO A 1595 REMARK 465 LEU A 1596 REMARK 465 GLY A 1597 REMARK 465 SER A 1598 REMARK 465 GLU A 1599 REMARK 465 ASN A 1600 REMARK 465 PHE A 1601 REMARK 465 ASN A 1602 REMARK 465 VAL A 1603 REMARK 465 ALA A 1604 REMARK 465 THR A 1605 REMARK 465 GLU A 1606 REMARK 465 GLU A 1607 REMARK 465 SER A 1608 REMARK 465 SER A 1609 REMARK 465 GLU A 1610 REMARK 465 SER A 1761 REMARK 465 MET B 0 REMARK 465 ALA B 1 REMARK 465 ASP B 2 REMARK 465 GLN B 3 REMARK 465 LEU B 4 REMARK 465 THR B 5 REMARK 465 GLU B 6 REMARK 465 LYS B 148 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A1717 C - N - CA ANGL. DEV. = 9.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A1628 76.83 -152.42 REMARK 500 ALA A1654 153.49 -48.76 REMARK 500 ASP B 58 31.51 -93.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1003 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 20 OD1 REMARK 620 2 ASP B 22 OD1 65.4 REMARK 620 3 ASP B 24 OD1 86.0 87.2 REMARK 620 4 ASP B 24 OD2 119.9 79.8 43.2 REMARK 620 5 THR B 26 O 78.0 139.9 74.0 106.6 REMARK 620 6 GLU B 31 OE1 73.8 90.8 158.6 156.6 94.4 REMARK 620 7 GLU B 31 OE2 120.2 131.6 138.5 119.6 80.5 53.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1004 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 56 OD1 REMARK 620 2 ASP B 58 OD1 76.1 REMARK 620 3 THR B 62 O 77.9 146.7 REMARK 620 4 GLU B 67 OE1 116.3 125.3 85.1 REMARK 620 5 GLU B 67 OE2 67.1 88.0 100.8 56.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1002 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 93 OD1 REMARK 620 2 ASP B 95 OD1 84.8 REMARK 620 3 ASP B 95 OD2 124.4 48.8 REMARK 620 4 ASN B 97 OD1 83.6 69.2 101.8 REMARK 620 5 TYR B 99 O 70.0 133.1 163.2 69.2 REMARK 620 6 GLU B 104 OE1 81.6 120.4 95.9 161.3 94.9 REMARK 620 7 GLU B 104 OE2 126.0 133.9 85.5 138.2 92.2 48.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1001 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 129 OD1 REMARK 620 2 ASP B 133 OD1 79.7 REMARK 620 3 GLN B 135 O 69.6 88.5 REMARK 620 4 GLU B 140 OE1 85.9 149.8 111.3 REMARK 620 5 GLU B 140 OE2 69.1 145.4 67.1 44.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 1004 DBREF 6MC9 A 1599 1754 UNP P35499 SCN4A_HUMAN 1599 1754 DBREF 6MC9 B 0 148 UNP P0DP29 CALM1_RAT 1 149 SEQADV 6MC9 GLY A 1594 UNP P35499 EXPRESSION TAG SEQADV 6MC9 PRO A 1595 UNP P35499 EXPRESSION TAG SEQADV 6MC9 LEU A 1596 UNP P35499 EXPRESSION TAG SEQADV 6MC9 GLY A 1597 UNP P35499 EXPRESSION TAG SEQADV 6MC9 SER A 1598 UNP P35499 EXPRESSION TAG SEQADV 6MC9 LEU A 1755 UNP P35499 EXPRESSION TAG SEQADV 6MC9 THR A 1756 UNP P35499 EXPRESSION TAG SEQADV 6MC9 ARG A 1757 UNP P35499 EXPRESSION TAG SEQADV 6MC9 ALA A 1758 UNP P35499 EXPRESSION TAG SEQADV 6MC9 ALA A 1759 UNP P35499 EXPRESSION TAG SEQADV 6MC9 ALA A 1760 UNP P35499 EXPRESSION TAG SEQADV 6MC9 SER A 1761 UNP P35499 EXPRESSION TAG SEQRES 1 A 168 GLY PRO LEU GLY SER GLU ASN PHE ASN VAL ALA THR GLU SEQRES 2 A 168 GLU SER SER GLU PRO LEU GLY GLU ASP ASP PHE GLU MET SEQRES 3 A 168 PHE TYR GLU THR TRP GLU LYS PHE ASP PRO ASP ALA THR SEQRES 4 A 168 GLN PHE ILE ALA TYR SER ARG LEU SER ASP PHE VAL ASP SEQRES 5 A 168 THR LEU GLN GLU PRO LEU ARG ILE ALA LYS PRO ASN LYS SEQRES 6 A 168 ILE LYS LEU ILE THR LEU ASP LEU PRO MET VAL PRO GLY SEQRES 7 A 168 ASP LYS ILE HIS CYS LEU ASP ILE LEU PHE ALA LEU THR SEQRES 8 A 168 LYS GLU VAL LEU GLY ASP SER GLY GLU MET ASP ALA LEU SEQRES 9 A 168 LYS GLN THR MET GLU GLU LYS PHE MET ALA ALA ASN PRO SEQRES 10 A 168 SER LYS VAL SER TYR GLU PRO ILE THR THR THR LEU LYS SEQRES 11 A 168 ARG LYS HIS GLU GLU VAL CYS ALA ILE LYS ILE GLN ARG SEQRES 12 A 168 ALA TYR ARG ARG HIS LEU LEU GLN ARG SER MET LYS GLN SEQRES 13 A 168 ALA SER TYR MET TYR LEU THR ARG ALA ALA ALA SER SEQRES 1 B 149 MET ALA ASP GLN LEU THR GLU GLU GLN ILE ALA GLU PHE SEQRES 2 B 149 LYS GLU ALA PHE SER LEU PHE ASP LYS ASP GLY ASP GLY SEQRES 3 B 149 THR ILE THR THR LYS GLU LEU GLY THR VAL MET ARG SER SEQRES 4 B 149 LEU GLY GLN ASN PRO THR GLU ALA GLU LEU GLN ASP MET SEQRES 5 B 149 ILE ASN GLU VAL ASP ALA ASP GLY ASN GLY THR ILE ASP SEQRES 6 B 149 PHE PRO GLU PHE LEU THR MET MET ALA ARG LYS MET LYS SEQRES 7 B 149 ASP THR ASP SER GLU GLU GLU ILE ARG GLU ALA PHE ARG SEQRES 8 B 149 VAL PHE ASP LYS ASP GLY ASN GLY TYR ILE SER ALA ALA SEQRES 9 B 149 GLU LEU ARG HIS VAL MET THR ASN LEU GLY GLU LYS LEU SEQRES 10 B 149 THR ASP GLU GLU VAL ASP GLU MET ILE ARG GLU ALA ASP SEQRES 11 B 149 ILE ASP GLY ASP GLY GLN VAL ASN TYR GLU GLU PHE VAL SEQRES 12 B 149 GLN MET MET THR ALA LYS HET CA B1001 1 HET CA B1002 1 HET CA B1003 1 HET CA B1004 1 HETNAM CA CALCIUM ION FORMUL 3 CA 4(CA 2+) HELIX 1 AA1 GLY A 1613 ASP A 1628 1 16 HELIX 2 AA2 TYR A 1637 THR A 1646 1 10 HELIX 3 AA3 ASN A 1657 ASP A 1665 1 9 HELIX 4 AA4 CYS A 1676 LEU A 1688 1 13 HELIX 5 AA5 SER A 1691 ASN A 1709 1 19 HELIX 6 AA6 THR A 1721 ALA A 1760 1 40 HELIX 7 AA7 GLU B 11 ASP B 20 1 10 HELIX 8 AA8 THR B 28 LEU B 39 1 12 HELIX 9 AA9 THR B 44 VAL B 55 1 12 HELIX 10 AB1 ASP B 64 LYS B 77 1 14 HELIX 11 AB2 SER B 81 ASP B 93 1 13 HELIX 12 AB3 ALA B 102 ASN B 111 1 10 HELIX 13 AB4 THR B 117 ASP B 129 1 13 HELIX 14 AB5 TYR B 138 THR B 146 1 9 SHEET 1 AA1 4 PHE A1634 ALA A1636 0 SHEET 2 AA1 4 LYS A1673 HIS A1675 -1 O ILE A1674 N ILE A1635 SHEET 3 AA1 4 PRO A1667 VAL A1669 -1 N VAL A1669 O LYS A1673 SHEET 4 AA1 4 THR A1719 THR A1720 -1 O THR A1719 N MET A1668 SHEET 1 AA2 2 TYR B 99 SER B 101 0 SHEET 2 AA2 2 GLN B 135 ASN B 137 -1 O VAL B 136 N ILE B 100 LINK OD1 ASP B 20 CA CA B1003 1555 1555 2.43 LINK OD1 ASP B 22 CA CA B1003 1555 1555 2.64 LINK OD1 ASP B 24 CA CA B1003 1555 1555 2.40 LINK OD2 ASP B 24 CA CA B1003 1555 1555 3.19 LINK O THR B 26 CA CA B1003 1555 1555 2.45 LINK OE1 GLU B 31 CA CA B1003 1555 1555 2.31 LINK OE2 GLU B 31 CA CA B1003 1555 1555 2.59 LINK OD1 ASP B 56 CA CA B1004 1555 1555 2.91 LINK OD1 ASP B 58 CA CA B1004 1555 1555 2.42 LINK O THR B 62 CA CA B1004 1555 1555 2.44 LINK OE1 GLU B 67 CA CA B1004 1555 1555 2.31 LINK OE2 GLU B 67 CA CA B1004 1555 1555 2.31 LINK OD1 ASP B 93 CA CA B1002 1555 1555 2.65 LINK OD1 ASP B 95 CA CA B1002 1555 1555 2.65 LINK OD2 ASP B 95 CA CA B1002 1555 1555 2.66 LINK OD1 ASN B 97 CA CA B1002 1555 1555 2.68 LINK O TYR B 99 CA CA B1002 1555 1555 2.64 LINK OE1 GLU B 104 CA CA B1002 1555 1555 2.65 LINK OE2 GLU B 104 CA CA B1002 1555 1555 2.65 LINK OD1 ASP B 129 CA CA B1001 1555 1555 2.69 LINK OD1 ASP B 133 CA CA B1001 1555 1555 2.32 LINK O GLN B 135 CA CA B1001 1555 1555 2.41 LINK OE1 GLU B 140 CA CA B1001 1555 1555 2.86 LINK OE2 GLU B 140 CA CA B1001 1555 1555 2.95 CISPEP 1 PRO A 1670 GLY A 1671 0 -10.72 SITE 1 AC1 5 ASP B 129 ASP B 131 ASP B 133 GLN B 135 SITE 2 AC1 5 GLU B 140 SITE 1 AC2 5 ASP B 93 ASP B 95 ASN B 97 TYR B 99 SITE 2 AC2 5 GLU B 104 SITE 1 AC3 5 ASP B 20 ASP B 22 ASP B 24 THR B 26 SITE 2 AC3 5 GLU B 31 SITE 1 AC4 5 ASP B 56 ASP B 58 ASN B 60 THR B 62 SITE 2 AC4 5 GLU B 67 CRYST1 72.615 72.615 134.661 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013771 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013771 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007426 0.00000