data_6MDX # _entry.id 6MDX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.320 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6MDX WWPDB D_1000236734 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6MDX _pdbx_database_status.recvd_initial_deposition_date 2018-09-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Li, F.' 1 0000-0002-6442-9063 'Raczynska, J.' 2 ? 'Chen, Z.' 3 0000-0002-1668-4051 'Yu, H.' 4 0000-0002-8861-049X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2211-1247 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 26 _citation.language ? _citation.page_first 3336 _citation.page_last 3346.e4 _citation.title 'Structural Insight into DNA-Dependent Activation of Human Metalloprotease Spartan.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.celrep.2019.02.082 _citation.pdbx_database_id_PubMed 30893605 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, F.' 1 ? primary 'Raczynska, J.E.' 2 ? primary 'Chen, Z.' 3 ? primary 'Yu, H.' 4 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6MDX _cell.details ? _cell.formula_units_Z ? _cell.length_a 128.324 _cell.length_a_esd ? _cell.length_b 29.507 _cell.length_b_esd ? _cell.length_c 50.298 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6MDX _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SprT-like domain-containing protein Spartan' 22063.420 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(P*CP*C)-3') ; 533.406 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 non-polymer syn 'TRIETHYLENE GLYCOL' 150.173 1 ? ? ? ? 5 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 6 non-polymer syn 'CITRATE ANION' 189.100 1 ? ? ? ? 7 water nat water 18.015 213 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DNA damage protein targeting VCP,DVC1,Protein with SprT-like domain at the N terminus,Spartan' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;SLSLVDASWELVDPTPDLQALFVQFNDQFFWGQLEAVEVKWSVR(MSE)TLCAGICSYEGK(MSE)CSIRLSEPLLKLRP RKDLVETLLHE(MSE)IHAYLFVTNNDKDREGHGPEFCKH(MSE)HRINSLTGANITVYHTFHDEVDEYRRHWWRCNGPC QHRPPYYGYV(MLZ)RATNREPSAHDYWWAEHQKTCGGTYIKIKE ; ;SLSLVDASWELVDPTPDLQALFVQFNDQFFWGQLEAVEVKWSVRMTLCAGICSYEGKMCSIRLSEPLLKLRPRKDLVETL LHEMIHAYLFVTNNDKDREGHGPEFCKHMHRINSLTGANITVYHTFHDEVDEYRRHWWRCNGPCQHRPPYYGYVKRATNR EPSAHDYWWAEHQKTCGGTYIKIKE ; A ? 2 polydeoxyribonucleotide no no '(DC)(DC)' CC D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 LEU n 1 3 SER n 1 4 LEU n 1 5 VAL n 1 6 ASP n 1 7 ALA n 1 8 SER n 1 9 TRP n 1 10 GLU n 1 11 LEU n 1 12 VAL n 1 13 ASP n 1 14 PRO n 1 15 THR n 1 16 PRO n 1 17 ASP n 1 18 LEU n 1 19 GLN n 1 20 ALA n 1 21 LEU n 1 22 PHE n 1 23 VAL n 1 24 GLN n 1 25 PHE n 1 26 ASN n 1 27 ASP n 1 28 GLN n 1 29 PHE n 1 30 PHE n 1 31 TRP n 1 32 GLY n 1 33 GLN n 1 34 LEU n 1 35 GLU n 1 36 ALA n 1 37 VAL n 1 38 GLU n 1 39 VAL n 1 40 LYS n 1 41 TRP n 1 42 SER n 1 43 VAL n 1 44 ARG n 1 45 MSE n 1 46 THR n 1 47 LEU n 1 48 CYS n 1 49 ALA n 1 50 GLY n 1 51 ILE n 1 52 CYS n 1 53 SER n 1 54 TYR n 1 55 GLU n 1 56 GLY n 1 57 LYS n 1 58 MSE n 1 59 CYS n 1 60 SER n 1 61 ILE n 1 62 ARG n 1 63 LEU n 1 64 SER n 1 65 GLU n 1 66 PRO n 1 67 LEU n 1 68 LEU n 1 69 LYS n 1 70 LEU n 1 71 ARG n 1 72 PRO n 1 73 ARG n 1 74 LYS n 1 75 ASP n 1 76 LEU n 1 77 VAL n 1 78 GLU n 1 79 THR n 1 80 LEU n 1 81 LEU n 1 82 HIS n 1 83 GLU n 1 84 MSE n 1 85 ILE n 1 86 HIS n 1 87 ALA n 1 88 TYR n 1 89 LEU n 1 90 PHE n 1 91 VAL n 1 92 THR n 1 93 ASN n 1 94 ASN n 1 95 ASP n 1 96 LYS n 1 97 ASP n 1 98 ARG n 1 99 GLU n 1 100 GLY n 1 101 HIS n 1 102 GLY n 1 103 PRO n 1 104 GLU n 1 105 PHE n 1 106 CYS n 1 107 LYS n 1 108 HIS n 1 109 MSE n 1 110 HIS n 1 111 ARG n 1 112 ILE n 1 113 ASN n 1 114 SER n 1 115 LEU n 1 116 THR n 1 117 GLY n 1 118 ALA n 1 119 ASN n 1 120 ILE n 1 121 THR n 1 122 VAL n 1 123 TYR n 1 124 HIS n 1 125 THR n 1 126 PHE n 1 127 HIS n 1 128 ASP n 1 129 GLU n 1 130 VAL n 1 131 ASP n 1 132 GLU n 1 133 TYR n 1 134 ARG n 1 135 ARG n 1 136 HIS n 1 137 TRP n 1 138 TRP n 1 139 ARG n 1 140 CYS n 1 141 ASN n 1 142 GLY n 1 143 PRO n 1 144 CYS n 1 145 GLN n 1 146 HIS n 1 147 ARG n 1 148 PRO n 1 149 PRO n 1 150 TYR n 1 151 TYR n 1 152 GLY n 1 153 TYR n 1 154 VAL n 1 155 MLZ n 1 156 ARG n 1 157 ALA n 1 158 THR n 1 159 ASN n 1 160 ARG n 1 161 GLU n 1 162 PRO n 1 163 SER n 1 164 ALA n 1 165 HIS n 1 166 ASP n 1 167 TYR n 1 168 TRP n 1 169 TRP n 1 170 ALA n 1 171 GLU n 1 172 HIS n 1 173 GLN n 1 174 LYS n 1 175 THR n 1 176 CYS n 1 177 GLY n 1 178 GLY n 1 179 THR n 1 180 TYR n 1 181 ILE n 1 182 LYS n 1 183 ILE n 1 184 LYS n 1 185 GLU n 2 1 DC n 2 2 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 187 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'SPRTN, C1orf124, DVC1, UNQ1880/PRO4323' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 2 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SPRTN_HUMAN Q9H040 Q9H040-2 1 ;SLSLVDASWELVDPTPDLQALFVQFNDQFFWGQLEAVEVKWSVRMTLCAGICSYEGKGGMCSIRLSEPLLKLRPRKDLVE TLLHEMIHAYLFVTNNDKDREGHGPEFCKHMHRINSLTGANITVYHTFHDEVDEYRRHWWRCNGPCQHRPPYYGYVKRAT NREPSAHDYWWAEHQKTCGGTYIKIKE ; 28 2 PDB 6MDX 6MDX ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6MDX A 1 ? 154 ? Q9H040 28 ? 214 ? 28 183 2 2 6MDX D 1 ? 2 ? 6MDX 1 ? 2 ? 1 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 FLC non-polymer . 'CITRATE ANION' ? 'C6 H5 O7 -3' 189.100 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MLZ 'L-peptide linking' n N-METHYL-LYSINE ? 'C7 H16 N2 O2' 160.214 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PGE non-polymer . 'TRIETHYLENE GLYCOL' ? 'C6 H14 O4' 150.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6MDX _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.18 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 43.64 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M sodium citrate tribasic dihydrate at pH 5.5 and 14% (w/v) PEG8000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-11-09 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'SAGITALLY FOCUSED Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 11.97 _reflns.entry_id 6MDX _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.55 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 28797 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 13.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 29.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.028 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.55 _reflns_shell.d_res_low 1.58 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1396 _reflns_shell.percent_possible_all 99.8 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.510 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.11 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] 0.07 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] 0.04 _refine.B_iso_max ? _refine.B_iso_mean 18.285 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.965 _refine.correlation_coeff_Fo_to_Fc_free 0.952 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6MDX _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.55 _refine.ls_d_res_low 46.83 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 25729 _refine.ls_number_reflns_R_free 1868 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.32 _refine.ls_percent_reflns_R_free 6.8 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.16145 _refine.ls_R_factor_R_free 0.19278 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.15915 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.089 _refine.pdbx_overall_ESU_R_Free 0.088 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 1.764 _refine.overall_SU_ML 0.059 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 1527 _refine_hist.pdbx_number_atoms_nucleic_acid 39 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 213 _refine_hist.number_atoms_total 1808 _refine_hist.d_res_high 1.55 _refine_hist.d_res_low 46.83 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.013 0.014 1958 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.017 1627 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.660 1.673 2678 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.054 1.715 3835 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 24.976 5.668 247 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 32.966 21.150 113 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 12.813 15.000 279 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 17.470 15.000 14 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.089 0.200 234 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 0.020 2428 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 408 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 4.039 1.438 864 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 4.041 1.438 863 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 5.129 2.144 1082 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 5.127 2.145 1083 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 7.757 ? 1094 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 7.758 ? 1093 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 9.640 ? 1583 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 10.289 25.649 2119 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 10.290 25.644 2120 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? 8.944 3.000 4 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? 20.139 5.000 17 ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.550 _refine_ls_shell.d_res_low 1.590 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 110 _refine_ls_shell.number_reflns_R_work 1464 _refine_ls_shell.percent_reflns_obs 76.97 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.276 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.240 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6MDX _struct.title 'Mechanism of protease dependent DPC repair' _struct.pdbx_descriptor 'SprT-like domain-containing protein Spartan/DNA Complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6MDX _struct_keywords.text 'DPC repair, protease, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? H N N 7 ? I N N 7 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 6 ? LEU A 11 ? ASP A 33 LEU A 38 5 ? 6 HELX_P HELX_P2 AA2 ASP A 17 ? PHE A 30 ? ASP A 44 PHE A 57 1 ? 14 HELX_P HELX_P3 AA3 GLU A 65 ? LYS A 69 ? GLU A 94 LYS A 98 1 ? 5 HELX_P HELX_P4 AA4 PRO A 72 ? THR A 92 ? PRO A 101 THR A 121 1 ? 21 HELX_P HELX_P5 AA5 GLY A 102 ? GLY A 117 ? GLY A 131 GLY A 146 1 ? 16 HELX_P HELX_P6 AA6 HIS A 127 ? ARG A 134 ? HIS A 156 ARG A 163 1 ? 8 HELX_P HELX_P7 AA7 GLY A 142 ? ARG A 147 ? GLY A 171 ARG A 176 5 ? 6 HELX_P HELX_P8 AA8 TRP A 168 ? CYS A 176 ? TRP A 197 CYS A 205 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A ARG 44 C ? ? ? 1_555 A MSE 45 N ? ? A ARG 71 A MSE 72 1_555 ? ? ? ? ? ? ? 1.345 ? covale2 covale both ? A MSE 45 C ? ? ? 1_555 A THR 46 N ? ? A MSE 72 A THR 73 1_555 ? ? ? ? ? ? ? 1.337 ? covale3 covale none ? A CYS 48 SG ? ? ? 1_555 A MLZ 155 CM ? ? A CYS 75 A MLZ 184 1_555 ? ? ? ? ? ? ? 1.859 ? covale4 covale both ? A MSE 58 C ? ? ? 1_555 A CYS 59 N ? ? A MSE 87 A CYS 88 1_555 ? ? ? ? ? ? ? 1.325 ? metalc1 metalc ? ? A HIS 82 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 111 A ZN 303 1_555 ? ? ? ? ? ? ? 2.036 ? covale5 covale both ? A GLU 83 C ? ? ? 1_555 A MSE 84 N ? ? A GLU 112 A MSE 113 1_555 ? ? ? ? ? ? ? 1.333 ? covale6 covale both ? A MSE 84 C ? ? ? 1_555 A ILE 85 N ? ? A MSE 113 A ILE 114 1_555 ? ? ? ? ? ? ? 1.348 ? metalc2 metalc ? ? A HIS 86 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 115 A ZN 303 1_555 ? ? ? ? ? ? ? 2.065 ? metalc3 metalc ? ? A HIS 101 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 130 A ZN 303 1_555 ? ? ? ? ? ? ? 2.058 ? covale7 covale both ? A HIS 108 C ? ? ? 1_555 A MSE 109 N ? ? A HIS 137 A MSE 138 1_555 ? ? ? ? ? ? ? 1.328 ? covale8 covale both ? A MSE 109 C ? ? ? 1_555 A HIS 110 N ? ? A MSE 138 A HIS 139 1_555 ? ? ? ? ? ? ? 1.358 ? metalc4 metalc ? ? A CYS 140 SG A ? ? 1_555 F ZN . ZN A ? A CYS 169 A ZN 304 1_555 ? ? ? ? ? ? ? 2.295 ? metalc5 metalc ? ? A CYS 140 SG B ? ? 1_555 F ZN . ZN B ? A CYS 169 A ZN 304 1_555 ? ? ? ? ? ? ? 2.313 ? metalc6 metalc ? ? A CYS 144 SG A ? ? 1_555 F ZN . ZN A ? A CYS 173 A ZN 304 1_555 ? ? ? ? ? ? ? 2.269 ? metalc7 metalc ? ? A CYS 144 SG B ? ? 1_555 F ZN . ZN B ? A CYS 173 A ZN 304 1_555 ? ? ? ? ? ? ? 2.303 ? covale9 covale both ? A VAL 154 C ? ? ? 1_555 A MLZ 155 N ? ? A VAL 183 A MLZ 184 1_555 ? ? ? ? ? ? ? 1.316 ? covale10 covale both ? A MLZ 155 C ? ? ? 1_555 A ARG 156 N ? ? A MLZ 184 A ARG 185 1_555 ? ? ? ? ? ? ? 1.382 ? metalc8 metalc ? ? A HIS 172 NE2 A ? ? 1_555 F ZN . ZN A ? A HIS 201 A ZN 304 1_555 ? ? ? ? ? ? ? 2.004 ? metalc9 metalc ? ? A HIS 172 NE2 B ? ? 1_555 F ZN . ZN B ? A HIS 201 A ZN 304 1_555 ? ? ? ? ? ? ? 2.086 ? metalc10 metalc ? ? A CYS 176 SG A ? ? 1_555 F ZN . ZN A ? A CYS 205 A ZN 304 1_555 ? ? ? ? ? ? ? 2.371 ? metalc11 metalc ? ? A CYS 176 SG B ? ? 1_555 F ZN . ZN B ? A CYS 205 A ZN 304 1_555 ? ? ? ? ? ? ? 2.353 ? metalc12 metalc ? ? E ZN . ZN ? ? ? 1_555 G FLC . OHB ? ? A ZN 303 A FLC 305 1_555 ? ? ? ? ? ? ? 2.167 ? metalc13 metalc ? ? E ZN . ZN ? ? ? 1_555 G FLC . OB2 ? ? A ZN 303 A FLC 305 1_555 ? ? ? ? ? ? ? 2.088 ? metalc14 metalc ? ? E ZN . ZN ? ? ? 1_555 G FLC . OA2 ? ? A ZN 303 A FLC 305 1_555 ? ? ? ? ? ? ? 2.102 ? covale11 covale none ? B DC 1 C2 C ? ? 1_555 B DC 2 "C5'" C ? D DC 1 D DC 2 2_565 ? ? ? ? ? ? ? 1.555 ? covale12 covale none ? B DC 1 C4 C ? ? 1_555 B DC 2 C6 C ? D DC 1 D DC 2 2_565 ? ? ? ? ? ? ? 1.423 ? covale13 covale none ? B DC 1 N4 C ? ? 1_555 B DC 2 C6 C ? D DC 1 D DC 2 2_565 ? ? ? ? ? ? ? 1.419 ? covale14 covale none ? B DC 1 C5 C ? ? 1_555 B DC 2 "C1'" C ? D DC 1 D DC 2 2_565 ? ? ? ? ? ? ? 1.295 ? covale15 covale none ? B DC 1 C5 C ? ? 1_555 B DC 2 N1 C ? D DC 1 D DC 2 2_565 ? ? ? ? ? ? ? 1.275 ? covale16 covale none ? B DC 1 C5 C ? ? 1_555 B DC 2 C6 C ? D DC 1 D DC 2 2_565 ? ? ? ? ? ? ? 1.491 ? covale17 covale none ? B DC 1 C6 C ? ? 1_555 B DC 2 "C2'" C ? D DC 1 D DC 2 2_565 ? ? ? ? ? ? ? 1.158 ? covale18 covale none ? B DC 1 C6 C ? ? 1_555 B DC 2 "C1'" C ? D DC 1 D DC 2 2_565 ? ? ? ? ? ? ? 1.578 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 148 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 177 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 149 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 178 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.57 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 38 ? SER A 42 ? GLU A 65 SER A 69 AA1 2 SER A 60 ? SER A 64 ? SER A 89 SER A 93 AA1 3 GLY A 50 ? SER A 53 ? GLY A 77 SER A 80 AA2 1 TYR A 153 ? ARG A 156 ? TYR A 182 ARG A 185 AA2 2 HIS A 136 ? CYS A 140 ? HIS A 165 CYS A 169 AA2 3 TYR A 180 ? LYS A 184 ? TYR A 209 LYS A 213 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 38 ? N GLU A 65 O ILE A 61 ? O ILE A 90 AA1 2 3 O SER A 60 ? O SER A 89 N SER A 53 ? N SER A 80 AA2 1 2 O ARG A 156 ? O ARG A 185 N HIS A 136 ? N HIS A 165 AA2 2 3 N TRP A 137 ? N TRP A 166 O ILE A 183 ? O ILE A 212 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 301 ? 7 'binding site for residue EDO A 301' AC2 Software A PGE 302 ? 5 'binding site for residue PGE A 302' AC3 Software A ZN 303 ? 4 'binding site for residue ZN A 303' AC4 Software A ZN 304 ? 4 'binding site for residue ZN A 304' AC5 Software A FLC 305 ? 16 'binding site for residue FLC A 305' AC6 Software A MLZ 184 ? 22 'binding site for Di-peptide MLZ A 184 and ARG A 185' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 ARG A 139 ? ARG A 168 . ? 1_555 ? 2 AC1 7 TYR A 153 ? TYR A 182 . ? 1_555 ? 3 AC1 7 ILE A 183 ? ILE A 212 . ? 1_555 ? 4 AC1 7 FLC G . ? FLC A 305 . ? 1_555 ? 5 AC1 7 HOH H . ? HOH A 403 . ? 1_555 ? 6 AC1 7 HOH H . ? HOH A 485 . ? 1_555 ? 7 AC1 7 HOH H . ? HOH A 535 . ? 1_555 ? 8 AC2 5 THR A 46 ? THR A 73 . ? 2_565 ? 9 AC2 5 THR A 46 ? THR A 73 . ? 1_555 ? 10 AC2 5 LEU A 67 ? LEU A 96 . ? 1_555 ? 11 AC2 5 ARG A 134 ? ARG A 163 . ? 2_565 ? 12 AC2 5 ARG A 134 ? ARG A 163 . ? 1_555 ? 13 AC3 4 HIS A 82 ? HIS A 111 . ? 1_555 ? 14 AC3 4 HIS A 86 ? HIS A 115 . ? 1_555 ? 15 AC3 4 HIS A 101 ? HIS A 130 . ? 1_555 ? 16 AC3 4 FLC G . ? FLC A 305 . ? 1_555 ? 17 AC4 4 CYS A 140 ? CYS A 169 . ? 1_555 ? 18 AC4 4 CYS A 144 ? CYS A 173 . ? 1_555 ? 19 AC4 4 HIS A 172 ? HIS A 201 . ? 1_555 ? 20 AC4 4 CYS A 176 ? CYS A 205 . ? 1_555 ? 21 AC5 16 GLY A 50 ? GLY A 77 . ? 1_555 ? 22 AC5 16 ILE A 51 ? ILE A 78 . ? 1_555 ? 23 AC5 16 HIS A 82 ? HIS A 111 . ? 1_555 ? 24 AC5 16 GLU A 83 ? GLU A 112 . ? 1_555 ? 25 AC5 16 HIS A 86 ? HIS A 115 . ? 1_555 ? 26 AC5 16 HIS A 101 ? HIS A 130 . ? 1_555 ? 27 AC5 16 HIS A 124 ? HIS A 153 . ? 1_555 ? 28 AC5 16 TRP A 137 ? TRP A 166 . ? 1_555 ? 29 AC5 16 TYR A 153 ? TYR A 182 . ? 1_555 ? 30 AC5 16 EDO C . ? EDO A 301 . ? 1_555 ? 31 AC5 16 ZN E . ? ZN A 303 . ? 1_555 ? 32 AC5 16 HOH H . ? HOH A 417 . ? 1_555 ? 33 AC5 16 HOH H . ? HOH A 427 . ? 1_555 ? 34 AC5 16 HOH H . ? HOH A 436 . ? 1_555 ? 35 AC5 16 HOH H . ? HOH A 472 . ? 1_555 ? 36 AC5 16 HOH H . ? HOH A 535 . ? 1_555 ? 37 AC6 22 LEU A 47 ? LEU A 74 . ? 1_555 ? 38 AC6 22 CYS A 48 ? CYS A 75 . ? 1_555 ? 39 AC6 22 ARG A 134 ? ARG A 163 . ? 1_555 ? 40 AC6 22 ARG A 135 ? ARG A 164 . ? 1_555 ? 41 AC6 22 HIS A 136 ? HIS A 165 . ? 1_555 ? 42 AC6 22 TRP A 137 ? TRP A 166 . ? 1_555 ? 43 AC6 22 VAL A 154 ? VAL A 183 . ? 1_555 ? 44 AC6 22 ALA A 157 ? ALA A 186 . ? 1_555 ? 45 AC6 22 THR A 158 ? THR A 187 . ? 1_555 ? 46 AC6 22 ARG A 160 ? ARG A 189 . ? 1_555 ? 47 AC6 22 GLU A 161 ? GLU A 190 . ? 1_555 ? 48 AC6 22 PRO A 162 ? PRO A 191 . ? 1_555 ? 49 AC6 22 ASP A 166 ? ASP A 195 . ? 1_555 ? 50 AC6 22 TYR A 167 ? TYR A 196 . ? 2_565 ? 51 AC6 22 TRP A 168 ? TRP A 197 . ? 1_555 ? 52 AC6 22 HOH H . ? HOH A 408 . ? 1_555 ? 53 AC6 22 HOH H . ? HOH A 518 . ? 1_555 ? 54 AC6 22 HOH H . ? HOH A 610 . ? 1_555 ? 55 AC6 22 DC B 1 ? DC D 1 . ? 1_555 ? 56 AC6 22 DC B 2 ? DC D 2 . ? 1_555 ? 57 AC6 22 HOH I . ? HOH D 101 . ? 1_555 ? 58 AC6 22 HOH I . ? HOH D 102 . ? 2_565 ? # _atom_sites.entry_id 6MDX _atom_sites.fract_transf_matrix[1][1] 0.007793 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.033890 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019882 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 28 28 SER SER A . n A 1 2 LEU 2 29 29 LEU LEU A . n A 1 3 SER 3 30 30 SER SER A . n A 1 4 LEU 4 31 31 LEU LEU A . n A 1 5 VAL 5 32 32 VAL VAL A . n A 1 6 ASP 6 33 33 ASP ASP A . n A 1 7 ALA 7 34 34 ALA ALA A . n A 1 8 SER 8 35 35 SER SER A . n A 1 9 TRP 9 36 36 TRP TRP A . n A 1 10 GLU 10 37 37 GLU GLU A . n A 1 11 LEU 11 38 38 LEU LEU A . n A 1 12 VAL 12 39 39 VAL VAL A . n A 1 13 ASP 13 40 40 ASP ASP A . n A 1 14 PRO 14 41 41 PRO PRO A . n A 1 15 THR 15 42 42 THR THR A . n A 1 16 PRO 16 43 43 PRO PRO A . n A 1 17 ASP 17 44 44 ASP ASP A . n A 1 18 LEU 18 45 45 LEU LEU A . n A 1 19 GLN 19 46 46 GLN GLN A . n A 1 20 ALA 20 47 47 ALA ALA A . n A 1 21 LEU 21 48 48 LEU LEU A . n A 1 22 PHE 22 49 49 PHE PHE A . n A 1 23 VAL 23 50 50 VAL VAL A . n A 1 24 GLN 24 51 51 GLN GLN A . n A 1 25 PHE 25 52 52 PHE PHE A . n A 1 26 ASN 26 53 53 ASN ASN A . n A 1 27 ASP 27 54 54 ASP ASP A . n A 1 28 GLN 28 55 55 GLN GLN A . n A 1 29 PHE 29 56 56 PHE PHE A . n A 1 30 PHE 30 57 57 PHE PHE A . n A 1 31 TRP 31 58 58 TRP TRP A . n A 1 32 GLY 32 59 59 GLY GLY A . n A 1 33 GLN 33 60 60 GLN GLN A . n A 1 34 LEU 34 61 61 LEU LEU A . n A 1 35 GLU 35 62 62 GLU GLU A . n A 1 36 ALA 36 63 63 ALA ALA A . n A 1 37 VAL 37 64 64 VAL VAL A . n A 1 38 GLU 38 65 65 GLU GLU A . n A 1 39 VAL 39 66 66 VAL VAL A . n A 1 40 LYS 40 67 67 LYS LYS A . n A 1 41 TRP 41 68 68 TRP TRP A . n A 1 42 SER 42 69 69 SER SER A . n A 1 43 VAL 43 70 70 VAL VAL A . n A 1 44 ARG 44 71 71 ARG ARG A . n A 1 45 MSE 45 72 72 MSE MSE A . n A 1 46 THR 46 73 73 THR THR A . n A 1 47 LEU 47 74 74 LEU LEU A . n A 1 48 CYS 48 75 75 CYS CYS A . n A 1 49 ALA 49 76 76 ALA ALA A . n A 1 50 GLY 50 77 77 GLY GLY A . n A 1 51 ILE 51 78 78 ILE ILE A . n A 1 52 CYS 52 79 79 CYS CYS A . n A 1 53 SER 53 80 80 SER SER A . n A 1 54 TYR 54 81 81 TYR TYR A . n A 1 55 GLU 55 82 82 GLU GLU A . n A 1 56 GLY 56 85 ? ? ? A . n A 1 57 LYS 57 86 ? ? ? A . n A 1 58 MSE 58 87 87 MSE MSE A . n A 1 59 CYS 59 88 88 CYS CYS A . n A 1 60 SER 60 89 89 SER SER A . n A 1 61 ILE 61 90 90 ILE ILE A . n A 1 62 ARG 62 91 91 ARG ARG A . n A 1 63 LEU 63 92 92 LEU LEU A . n A 1 64 SER 64 93 93 SER SER A . n A 1 65 GLU 65 94 94 GLU GLU A . n A 1 66 PRO 66 95 95 PRO PRO A . n A 1 67 LEU 67 96 96 LEU LEU A . n A 1 68 LEU 68 97 97 LEU LEU A . n A 1 69 LYS 69 98 98 LYS LYS A . n A 1 70 LEU 70 99 99 LEU LEU A . n A 1 71 ARG 71 100 100 ARG ARG A . n A 1 72 PRO 72 101 101 PRO PRO A . n A 1 73 ARG 73 102 102 ARG ARG A . n A 1 74 LYS 74 103 103 LYS LYS A . n A 1 75 ASP 75 104 104 ASP ASP A . n A 1 76 LEU 76 105 105 LEU LEU A . n A 1 77 VAL 77 106 106 VAL VAL A . n A 1 78 GLU 78 107 107 GLU GLU A . n A 1 79 THR 79 108 108 THR THR A . n A 1 80 LEU 80 109 109 LEU LEU A . n A 1 81 LEU 81 110 110 LEU LEU A . n A 1 82 HIS 82 111 111 HIS HIS A . n A 1 83 GLU 83 112 112 GLU GLU A . n A 1 84 MSE 84 113 113 MSE MSE A . n A 1 85 ILE 85 114 114 ILE ILE A . n A 1 86 HIS 86 115 115 HIS HIS A . n A 1 87 ALA 87 116 116 ALA ALA A . n A 1 88 TYR 88 117 117 TYR TYR A . n A 1 89 LEU 89 118 118 LEU LEU A . n A 1 90 PHE 90 119 119 PHE PHE A . n A 1 91 VAL 91 120 120 VAL VAL A . n A 1 92 THR 92 121 121 THR THR A . n A 1 93 ASN 93 122 122 ASN ASN A . n A 1 94 ASN 94 123 123 ASN ASN A . n A 1 95 ASP 95 124 124 ASP ASP A . n A 1 96 LYS 96 125 125 LYS LYS A . n A 1 97 ASP 97 126 126 ASP ASP A . n A 1 98 ARG 98 127 127 ARG ARG A . n A 1 99 GLU 99 128 128 GLU GLU A . n A 1 100 GLY 100 129 129 GLY GLY A . n A 1 101 HIS 101 130 130 HIS HIS A . n A 1 102 GLY 102 131 131 GLY GLY A . n A 1 103 PRO 103 132 132 PRO PRO A . n A 1 104 GLU 104 133 133 GLU GLU A . n A 1 105 PHE 105 134 134 PHE PHE A . n A 1 106 CYS 106 135 135 CYS CYS A . n A 1 107 LYS 107 136 136 LYS LYS A . n A 1 108 HIS 108 137 137 HIS HIS A . n A 1 109 MSE 109 138 138 MSE MSE A . n A 1 110 HIS 110 139 139 HIS HIS A . n A 1 111 ARG 111 140 140 ARG ARG A . n A 1 112 ILE 112 141 141 ILE ILE A . n A 1 113 ASN 113 142 142 ASN ASN A . n A 1 114 SER 114 143 143 SER SER A . n A 1 115 LEU 115 144 144 LEU LEU A . n A 1 116 THR 116 145 145 THR THR A . n A 1 117 GLY 117 146 146 GLY GLY A . n A 1 118 ALA 118 147 147 ALA ALA A . n A 1 119 ASN 119 148 148 ASN ASN A . n A 1 120 ILE 120 149 149 ILE ILE A . n A 1 121 THR 121 150 150 THR THR A . n A 1 122 VAL 122 151 151 VAL VAL A . n A 1 123 TYR 123 152 152 TYR TYR A . n A 1 124 HIS 124 153 153 HIS HIS A . n A 1 125 THR 125 154 154 THR THR A . n A 1 126 PHE 126 155 155 PHE PHE A . n A 1 127 HIS 127 156 156 HIS HIS A . n A 1 128 ASP 128 157 157 ASP ASP A . n A 1 129 GLU 129 158 158 GLU GLU A . n A 1 130 VAL 130 159 159 VAL VAL A . n A 1 131 ASP 131 160 160 ASP ASP A . n A 1 132 GLU 132 161 161 GLU GLU A . n A 1 133 TYR 133 162 162 TYR TYR A . n A 1 134 ARG 134 163 163 ARG ARG A . n A 1 135 ARG 135 164 164 ARG ARG A . n A 1 136 HIS 136 165 165 HIS HIS A . n A 1 137 TRP 137 166 166 TRP TRP A . n A 1 138 TRP 138 167 167 TRP TRP A . n A 1 139 ARG 139 168 168 ARG ARG A . n A 1 140 CYS 140 169 169 CYS CYS A . n A 1 141 ASN 141 170 170 ASN ASN A . n A 1 142 GLY 142 171 171 GLY GLY A . n A 1 143 PRO 143 172 172 PRO PRO A . n A 1 144 CYS 144 173 173 CYS CYS A . n A 1 145 GLN 145 174 174 GLN GLN A . n A 1 146 HIS 146 175 175 HIS HIS A . n A 1 147 ARG 147 176 176 ARG ARG A . n A 1 148 PRO 148 177 177 PRO PRO A . n A 1 149 PRO 149 178 178 PRO PRO A . n A 1 150 TYR 150 179 179 TYR TYR A . n A 1 151 TYR 151 180 180 TYR TYR A . n A 1 152 GLY 152 181 181 GLY GLY A . n A 1 153 TYR 153 182 182 TYR TYR A . n A 1 154 VAL 154 183 183 VAL VAL A . n A 1 155 MLZ 155 184 184 MLZ MLZ A . n A 1 156 ARG 156 185 185 ARG ARG A . n A 1 157 ALA 157 186 186 ALA ALA A . n A 1 158 THR 158 187 187 THR THR A . n A 1 159 ASN 159 188 188 ASN ASN A . n A 1 160 ARG 160 189 189 ARG ARG A . n A 1 161 GLU 161 190 190 GLU GLU A . n A 1 162 PRO 162 191 191 PRO PRO A . n A 1 163 SER 163 192 192 SER SER A . n A 1 164 ALA 164 193 193 ALA ALA A . n A 1 165 HIS 165 194 194 HIS HIS A . n A 1 166 ASP 166 195 195 ASP ASP A . n A 1 167 TYR 167 196 196 TYR TYR A . n A 1 168 TRP 168 197 197 TRP TRP A . n A 1 169 TRP 169 198 198 TRP TRP A . n A 1 170 ALA 170 199 199 ALA ALA A . n A 1 171 GLU 171 200 200 GLU GLU A . n A 1 172 HIS 172 201 201 HIS HIS A . n A 1 173 GLN 173 202 202 GLN GLN A . n A 1 174 LYS 174 203 203 LYS LYS A . n A 1 175 THR 175 204 204 THR THR A . n A 1 176 CYS 176 205 205 CYS CYS A . n A 1 177 GLY 177 206 206 GLY GLY A . n A 1 178 GLY 178 207 207 GLY GLY A . n A 1 179 THR 179 208 208 THR THR A . n A 1 180 TYR 180 209 209 TYR TYR A . n A 1 181 ILE 181 210 210 ILE ILE A . n A 1 182 LYS 182 211 211 LYS LYS A . n A 1 183 ILE 183 212 212 ILE ILE A . n A 1 184 LYS 184 213 213 LYS LYS A . n A 1 185 GLU 185 214 214 GLU GLU A . n B 2 1 DC 1 1 1 DC DC D . n B 2 2 DC 2 2 2 DC DC D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO 1 301 301 EDO EDO A . D 4 PGE 1 302 401 PGE PG4 A . E 5 ZN 1 303 1 ZN ZN A . F 5 ZN 1 304 2 ZN ZN A . G 6 FLC 1 305 1 FLC FLC A . H 7 HOH 1 401 217 HOH HOH A . H 7 HOH 2 402 86 HOH HOH A . H 7 HOH 3 403 268 HOH HOH A . H 7 HOH 4 404 192 HOH HOH A . H 7 HOH 5 405 48 HOH HOH A . H 7 HOH 6 406 249 HOH HOH A . H 7 HOH 7 407 75 HOH HOH A . H 7 HOH 8 408 62 HOH HOH A . H 7 HOH 9 409 250 HOH HOH A . H 7 HOH 10 410 108 HOH HOH A . H 7 HOH 11 411 81 HOH HOH A . H 7 HOH 12 412 19 HOH HOH A . H 7 HOH 13 413 36 HOH HOH A . H 7 HOH 14 414 201 HOH HOH A . H 7 HOH 15 415 114 HOH HOH A . H 7 HOH 16 416 115 HOH HOH A . H 7 HOH 17 417 214 HOH HOH A . H 7 HOH 18 418 84 HOH HOH A . H 7 HOH 19 419 88 HOH HOH A . H 7 HOH 20 420 72 HOH HOH A . H 7 HOH 21 421 98 HOH HOH A . H 7 HOH 22 422 52 HOH HOH A . H 7 HOH 23 423 153 HOH HOH A . H 7 HOH 24 424 102 HOH HOH A . H 7 HOH 25 425 76 HOH HOH A . H 7 HOH 26 426 73 HOH HOH A . H 7 HOH 27 427 63 HOH HOH A . H 7 HOH 28 428 243 HOH HOH A . H 7 HOH 29 429 64 HOH HOH A . H 7 HOH 30 430 60 HOH HOH A . H 7 HOH 31 431 167 HOH HOH A . H 7 HOH 32 432 129 HOH HOH A . H 7 HOH 33 433 13 HOH HOH A . H 7 HOH 34 434 168 HOH HOH A . H 7 HOH 35 435 113 HOH HOH A . H 7 HOH 36 436 1 HOH HOH A . H 7 HOH 37 437 33 HOH HOH A . H 7 HOH 38 438 16 HOH HOH A . H 7 HOH 39 439 145 HOH HOH A . H 7 HOH 40 440 259 HOH HOH A . H 7 HOH 41 441 39 HOH HOH A . H 7 HOH 42 442 132 HOH HOH A . H 7 HOH 43 443 193 HOH HOH A . H 7 HOH 44 444 164 HOH HOH A . H 7 HOH 45 445 70 HOH HOH A . H 7 HOH 46 446 12 HOH HOH A . H 7 HOH 47 447 66 HOH HOH A . H 7 HOH 48 448 254 HOH HOH A . H 7 HOH 49 449 80 HOH HOH A . H 7 HOH 50 450 4 HOH HOH A . H 7 HOH 51 451 100 HOH HOH A . H 7 HOH 52 452 161 HOH HOH A . H 7 HOH 53 453 126 HOH HOH A . H 7 HOH 54 454 26 HOH HOH A . H 7 HOH 55 455 264 HOH HOH A . H 7 HOH 56 456 119 HOH HOH A . H 7 HOH 57 457 94 HOH HOH A . H 7 HOH 58 458 216 HOH HOH A . H 7 HOH 59 459 61 HOH HOH A . H 7 HOH 60 460 47 HOH HOH A . H 7 HOH 61 461 267 HOH HOH A . H 7 HOH 62 462 107 HOH HOH A . H 7 HOH 63 463 15 HOH HOH A . H 7 HOH 64 464 20 HOH HOH A . H 7 HOH 65 465 59 HOH HOH A . H 7 HOH 66 466 6 HOH HOH A . H 7 HOH 67 467 215 HOH HOH A . H 7 HOH 68 468 147 HOH HOH A . H 7 HOH 69 469 92 HOH HOH A . H 7 HOH 70 470 194 HOH HOH A . H 7 HOH 71 471 44 HOH HOH A . H 7 HOH 72 472 79 HOH HOH A . H 7 HOH 73 473 93 HOH HOH A . H 7 HOH 74 474 203 HOH HOH A . H 7 HOH 75 475 51 HOH HOH A . H 7 HOH 76 476 50 HOH HOH A . H 7 HOH 77 477 14 HOH HOH A . H 7 HOH 78 478 7 HOH HOH A . H 7 HOH 79 479 181 HOH HOH A . H 7 HOH 80 480 266 HOH HOH A . H 7 HOH 81 481 121 HOH HOH A . H 7 HOH 82 482 41 HOH HOH A . H 7 HOH 83 483 30 HOH HOH A . H 7 HOH 84 484 128 HOH HOH A . H 7 HOH 85 485 29 HOH HOH A . H 7 HOH 86 486 163 HOH HOH A . H 7 HOH 87 487 148 HOH HOH A . H 7 HOH 88 488 111 HOH HOH A . H 7 HOH 89 489 85 HOH HOH A . H 7 HOH 90 490 23 HOH HOH A . H 7 HOH 91 491 178 HOH HOH A . H 7 HOH 92 492 74 HOH HOH A . H 7 HOH 93 493 248 HOH HOH A . H 7 HOH 94 494 125 HOH HOH A . H 7 HOH 95 495 5 HOH HOH A . H 7 HOH 96 496 171 HOH HOH A . H 7 HOH 97 497 246 HOH HOH A . H 7 HOH 98 498 3 HOH HOH A . H 7 HOH 99 499 42 HOH HOH A . H 7 HOH 100 500 10 HOH HOH A . H 7 HOH 101 501 179 HOH HOH A . H 7 HOH 102 502 27 HOH HOH A . H 7 HOH 103 503 34 HOH HOH A . H 7 HOH 104 504 160 HOH HOH A . H 7 HOH 105 505 31 HOH HOH A . H 7 HOH 106 506 32 HOH HOH A . H 7 HOH 107 507 53 HOH HOH A . H 7 HOH 108 508 9 HOH HOH A . H 7 HOH 109 509 28 HOH HOH A . H 7 HOH 110 510 223 HOH HOH A . H 7 HOH 111 511 104 HOH HOH A . H 7 HOH 112 512 182 HOH HOH A . H 7 HOH 113 513 247 HOH HOH A . H 7 HOH 114 514 233 HOH HOH A . H 7 HOH 115 515 17 HOH HOH A . H 7 HOH 116 516 35 HOH HOH A . H 7 HOH 117 517 71 HOH HOH A . H 7 HOH 118 518 232 HOH HOH A . H 7 HOH 119 519 57 HOH HOH A . H 7 HOH 120 520 190 HOH HOH A . H 7 HOH 121 521 156 HOH HOH A . H 7 HOH 122 522 83 HOH HOH A . H 7 HOH 123 523 68 HOH HOH A . H 7 HOH 124 524 189 HOH HOH A . H 7 HOH 125 525 58 HOH HOH A . H 7 HOH 126 526 95 HOH HOH A . H 7 HOH 127 527 25 HOH HOH A . H 7 HOH 128 528 191 HOH HOH A . H 7 HOH 129 529 82 HOH HOH A . H 7 HOH 130 530 43 HOH HOH A . H 7 HOH 131 531 54 HOH HOH A . H 7 HOH 132 532 11 HOH HOH A . H 7 HOH 133 533 78 HOH HOH A . H 7 HOH 134 534 152 HOH HOH A . H 7 HOH 135 535 234 HOH HOH A . H 7 HOH 136 536 87 HOH HOH A . H 7 HOH 137 537 136 HOH HOH A . H 7 HOH 138 538 103 HOH HOH A . H 7 HOH 139 539 158 HOH HOH A . H 7 HOH 140 540 187 HOH HOH A . H 7 HOH 141 541 274 HOH HOH A . H 7 HOH 142 542 124 HOH HOH A . H 7 HOH 143 543 24 HOH HOH A . H 7 HOH 144 544 252 HOH HOH A . H 7 HOH 145 545 105 HOH HOH A . H 7 HOH 146 546 241 HOH HOH A . H 7 HOH 147 547 134 HOH HOH A . H 7 HOH 148 548 271 HOH HOH A . H 7 HOH 149 549 67 HOH HOH A . H 7 HOH 150 550 143 HOH HOH A . H 7 HOH 151 551 131 HOH HOH A . H 7 HOH 152 552 251 HOH HOH A . H 7 HOH 153 553 140 HOH HOH A . H 7 HOH 154 554 159 HOH HOH A . H 7 HOH 155 555 256 HOH HOH A . H 7 HOH 156 556 205 HOH HOH A . H 7 HOH 157 557 8 HOH HOH A . H 7 HOH 158 558 237 HOH HOH A . H 7 HOH 159 559 46 HOH HOH A . H 7 HOH 160 560 45 HOH HOH A . H 7 HOH 161 561 97 HOH HOH A . H 7 HOH 162 562 213 HOH HOH A . H 7 HOH 163 563 166 HOH HOH A . H 7 HOH 164 564 231 HOH HOH A . H 7 HOH 165 565 122 HOH HOH A . H 7 HOH 166 566 244 HOH HOH A . H 7 HOH 167 567 123 HOH HOH A . H 7 HOH 168 568 135 HOH HOH A . H 7 HOH 169 569 272 HOH HOH A . H 7 HOH 170 570 209 HOH HOH A . H 7 HOH 171 571 49 HOH HOH A . H 7 HOH 172 572 139 HOH HOH A . H 7 HOH 173 573 21 HOH HOH A . H 7 HOH 174 574 109 HOH HOH A . H 7 HOH 175 575 273 HOH HOH A . H 7 HOH 176 576 255 HOH HOH A . H 7 HOH 177 577 199 HOH HOH A . H 7 HOH 178 578 208 HOH HOH A . H 7 HOH 179 579 257 HOH HOH A . H 7 HOH 180 580 118 HOH HOH A . H 7 HOH 181 581 186 HOH HOH A . H 7 HOH 182 582 106 HOH HOH A . H 7 HOH 183 583 38 HOH HOH A . H 7 HOH 184 584 169 HOH HOH A . H 7 HOH 185 585 260 HOH HOH A . H 7 HOH 186 586 144 HOH HOH A . H 7 HOH 187 587 162 HOH HOH A . H 7 HOH 188 588 222 HOH HOH A . H 7 HOH 189 589 127 HOH HOH A . H 7 HOH 190 590 242 HOH HOH A . H 7 HOH 191 591 154 HOH HOH A . H 7 HOH 192 592 245 HOH HOH A . H 7 HOH 193 593 116 HOH HOH A . H 7 HOH 194 594 96 HOH HOH A . H 7 HOH 195 595 262 HOH HOH A . H 7 HOH 196 596 235 HOH HOH A . H 7 HOH 197 597 112 HOH HOH A . H 7 HOH 198 598 265 HOH HOH A . H 7 HOH 199 599 174 HOH HOH A . H 7 HOH 200 600 270 HOH HOH A . H 7 HOH 201 601 263 HOH HOH A . H 7 HOH 202 602 37 HOH HOH A . H 7 HOH 203 603 188 HOH HOH A . H 7 HOH 204 604 141 HOH HOH A . H 7 HOH 205 605 258 HOH HOH A . H 7 HOH 206 606 221 HOH HOH A . H 7 HOH 207 607 226 HOH HOH A . H 7 HOH 208 608 236 HOH HOH A . H 7 HOH 209 609 165 HOH HOH A . H 7 HOH 210 610 253 HOH HOH A . H 7 HOH 211 611 117 HOH HOH A . I 7 HOH 1 101 218 HOH HOH D . I 7 HOH 2 102 2 HOH HOH D . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 45 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 72 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 446 ? H HOH . 2 1 A HOH 549 ? H HOH . 3 1 A HOH 550 ? H HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 82 ? A HIS 111 ? 1_555 ZN ? E ZN . ? A ZN 303 ? 1_555 NE2 ? A HIS 86 ? A HIS 115 ? 1_555 96.8 ? 2 NE2 ? A HIS 82 ? A HIS 111 ? 1_555 ZN ? E ZN . ? A ZN 303 ? 1_555 NE2 ? A HIS 101 ? A HIS 130 ? 1_555 96.6 ? 3 NE2 ? A HIS 86 ? A HIS 115 ? 1_555 ZN ? E ZN . ? A ZN 303 ? 1_555 NE2 ? A HIS 101 ? A HIS 130 ? 1_555 97.6 ? 4 NE2 ? A HIS 82 ? A HIS 111 ? 1_555 ZN ? E ZN . ? A ZN 303 ? 1_555 OHB ? G FLC . ? A FLC 305 ? 1_555 167.2 ? 5 NE2 ? A HIS 86 ? A HIS 115 ? 1_555 ZN ? E ZN . ? A ZN 303 ? 1_555 OHB ? G FLC . ? A FLC 305 ? 1_555 92.6 ? 6 NE2 ? A HIS 101 ? A HIS 130 ? 1_555 ZN ? E ZN . ? A ZN 303 ? 1_555 OHB ? G FLC . ? A FLC 305 ? 1_555 90.7 ? 7 NE2 ? A HIS 82 ? A HIS 111 ? 1_555 ZN ? E ZN . ? A ZN 303 ? 1_555 OB2 ? G FLC . ? A FLC 305 ? 1_555 93.6 ? 8 NE2 ? A HIS 86 ? A HIS 115 ? 1_555 ZN ? E ZN . ? A ZN 303 ? 1_555 OB2 ? G FLC . ? A FLC 305 ? 1_555 165.2 ? 9 NE2 ? A HIS 101 ? A HIS 130 ? 1_555 ZN ? E ZN . ? A ZN 303 ? 1_555 OB2 ? G FLC . ? A FLC 305 ? 1_555 91.8 ? 10 OHB ? G FLC . ? A FLC 305 ? 1_555 ZN ? E ZN . ? A ZN 303 ? 1_555 OB2 ? G FLC . ? A FLC 305 ? 1_555 75.7 ? 11 NE2 ? A HIS 82 ? A HIS 111 ? 1_555 ZN ? E ZN . ? A ZN 303 ? 1_555 OA2 ? G FLC . ? A FLC 305 ? 1_555 90.7 ? 12 NE2 ? A HIS 86 ? A HIS 115 ? 1_555 ZN ? E ZN . ? A ZN 303 ? 1_555 OA2 ? G FLC . ? A FLC 305 ? 1_555 88.4 ? 13 NE2 ? A HIS 101 ? A HIS 130 ? 1_555 ZN ? E ZN . ? A ZN 303 ? 1_555 OA2 ? G FLC . ? A FLC 305 ? 1_555 170.0 ? 14 OHB ? G FLC . ? A FLC 305 ? 1_555 ZN ? E ZN . ? A ZN 303 ? 1_555 OA2 ? G FLC . ? A FLC 305 ? 1_555 80.9 ? 15 OB2 ? G FLC . ? A FLC 305 ? 1_555 ZN ? E ZN . ? A ZN 303 ? 1_555 OA2 ? G FLC . ? A FLC 305 ? 1_555 80.9 ? 16 SG A A CYS 140 ? A CYS 169 ? 1_555 ZN A F ZN . ? A ZN 304 ? 1_555 SG A A CYS 144 ? A CYS 173 ? 1_555 111.7 ? 17 SG A A CYS 140 ? A CYS 169 ? 1_555 ZN A F ZN . ? A ZN 304 ? 1_555 NE2 A A HIS 172 ? A HIS 201 ? 1_555 108.9 ? 18 SG A A CYS 144 ? A CYS 173 ? 1_555 ZN A F ZN . ? A ZN 304 ? 1_555 NE2 A A HIS 172 ? A HIS 201 ? 1_555 108.1 ? 19 SG A A CYS 140 ? A CYS 169 ? 1_555 ZN A F ZN . ? A ZN 304 ? 1_555 SG A A CYS 176 ? A CYS 205 ? 1_555 109.2 ? 20 SG A A CYS 144 ? A CYS 173 ? 1_555 ZN A F ZN . ? A ZN 304 ? 1_555 SG A A CYS 176 ? A CYS 205 ? 1_555 111.2 ? 21 NE2 A A HIS 172 ? A HIS 201 ? 1_555 ZN A F ZN . ? A ZN 304 ? 1_555 SG A A CYS 176 ? A CYS 205 ? 1_555 107.6 ? 22 SG B A CYS 140 ? A CYS 169 ? 1_555 ZN B F ZN . ? A ZN 304 ? 1_555 SG B A CYS 144 ? A CYS 173 ? 1_555 112.7 ? 23 SG B A CYS 140 ? A CYS 169 ? 1_555 ZN B F ZN . ? A ZN 304 ? 1_555 NE2 B A HIS 172 ? A HIS 201 ? 1_555 103.5 ? 24 SG B A CYS 144 ? A CYS 173 ? 1_555 ZN B F ZN . ? A ZN 304 ? 1_555 NE2 B A HIS 172 ? A HIS 201 ? 1_555 116.1 ? 25 SG B A CYS 140 ? A CYS 169 ? 1_555 ZN B F ZN . ? A ZN 304 ? 1_555 SG B A CYS 176 ? A CYS 205 ? 1_555 112.8 ? 26 SG B A CYS 144 ? A CYS 173 ? 1_555 ZN B F ZN . ? A ZN 304 ? 1_555 SG B A CYS 176 ? A CYS 205 ? 1_555 112.0 ? 27 NE2 B A HIS 172 ? A HIS 201 ? 1_555 ZN B F ZN . ? A ZN 304 ? 1_555 SG B A CYS 176 ? A CYS 205 ? 1_555 98.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-04-10 2 'Structure model' 1 1 2019-12-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Author supporting evidence' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category pdbx_audit_support # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 2 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_pdbx_audit_support.funding_organization' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0230 1 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? AutoSol ? ? ? . 4 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 585 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 585 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_565 _pdbx_validate_symm_contact.dist 2.02 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 140 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 140 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 140 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 116.97 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.33 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 205 ? A -123.61 -67.68 2 1 CYS A 205 ? B -128.02 -59.55 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 163 ? ? 0.075 'SIDE CHAIN' 2 1 ARG A 185 ? ? 0.120 'SIDE CHAIN' 3 1 ARG A 189 ? ? 0.105 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 85 ? A GLY 56 2 1 Y 1 A LYS 86 ? A LYS 57 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number RP150538-P2 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 1,2-ETHANEDIOL EDO 4 'TRIETHYLENE GLYCOL' PGE 5 'ZINC ION' ZN 6 'CITRATE ANION' FLC 7 water HOH #