HEADER LIGASE 06-SEP-18 6MEL TITLE SUCCINYL-COA SYNTHASE FROM CAMPYLOBACTER JEJUNI COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUCCINATE--COA LIGASE SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: SUCCINATE--COA LIGASE [ADP-FORMING] SUBUNIT BETA; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: SUCCINYL-COA SYNTHETASE SUBUNIT BETA,SCS-BETA; COMPND 9 EC: 6.2.1.5; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAMPYLOBACTER JEJUNI; SOURCE 3 ORGANISM_TAXID: 197; SOURCE 4 GENE: DDV82_04720, DDV86_02895; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG92; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: CAMPYLOBACTER JEJUNI (STRAIN RM1221); SOURCE 12 ORGANISM_TAXID: 195099; SOURCE 13 STRAIN: RM1221; SOURCE 14 GENE: SUCC, CJE0637; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PMCSG92 KEYWDS SUCCINYL-COA SYNTHASE, STRUCTURAL GENOMICS, CPX_90676_90715, KEYWDS 2 IDP90715, IDP90676, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 3 DISEASES, CSGID, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,N.MALTSEVA,R.JEDRZEJCZAK,K.J.F.SATCHELL,A.JOACHIMIAK,CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 3 11-OCT-23 6MEL 1 REMARK REVDAT 2 18-DEC-19 6MEL 1 REMARK REVDAT 1 19-SEP-18 6MEL 0 JRNL AUTH J.OSIPIUK,N.MALTSEVA,R.JEDRZEJCZAK,K.J.F.SATCHELL, JRNL AUTH 2 A.JOACHIMIAK, JRNL AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 4 (CSGID) JRNL TITL SUCCINYL-COA SYNTHASE FROM CAMPYLOBACTER JEJUNI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.06 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0230 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.06 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 76144 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4010 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.06 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.11 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5562 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.03 REMARK 3 BIN R VALUE (WORKING SET) : 0.2460 REMARK 3 BIN FREE R VALUE SET COUNT : 254 REMARK 3 BIN FREE R VALUE : 0.2740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5031 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 459 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.31000 REMARK 3 B22 (A**2) : 0.31000 REMARK 3 B33 (A**2) : -0.99000 REMARK 3 B12 (A**2) : 0.15000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.101 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.099 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.070 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.087 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.977 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.967 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5210 ; 0.013 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 5065 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7041 ; 1.517 ; 1.647 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11847 ; 1.004 ; 1.646 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 701 ; 5.953 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 210 ;34.515 ;25.238 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 968 ;15.153 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;16.102 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 715 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5835 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 889 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 601 REMARK 3 ORIGIN FOR THE GROUP (A): 31.8469 79.0779 -19.7102 REMARK 3 T TENSOR REMARK 3 T11: 0.0146 T22: 0.0277 REMARK 3 T33: 0.0266 T12: 0.0138 REMARK 3 T13: 0.0030 T23: 0.0049 REMARK 3 L TENSOR REMARK 3 L11: 0.2423 L22: 0.4503 REMARK 3 L33: 0.3602 L12: -0.2211 REMARK 3 L13: 0.1175 L23: -0.0832 REMARK 3 S TENSOR REMARK 3 S11: -0.0140 S12: -0.0064 S13: 0.0647 REMARK 3 S21: -0.0270 S22: -0.0462 S23: -0.0512 REMARK 3 S31: 0.0046 S32: 0.0619 S33: 0.0602 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 501 REMARK 3 ORIGIN FOR THE GROUP (A): 7.8818 66.6328 -10.4290 REMARK 3 T TENSOR REMARK 3 T11: 0.0231 T22: 0.0200 REMARK 3 T33: 0.0169 T12: 0.0036 REMARK 3 T13: 0.0008 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 0.2191 L22: 0.0734 REMARK 3 L33: 0.4504 L12: -0.0071 REMARK 3 L13: -0.0164 L23: -0.0940 REMARK 3 S TENSOR REMARK 3 S11: -0.0392 S12: -0.0182 S13: 0.0074 REMARK 3 S21: -0.0268 S22: -0.0207 S23: 0.0072 REMARK 3 S31: 0.0538 S32: -0.0133 S33: 0.0600 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6MEL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1000236762. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 80196 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.060 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : 0.10400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.06 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 8.10 REMARK 200 R MERGE FOR SHELL (I) : 0.94900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: 1JKJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0 M SODIUM CITRATE, 0.1 M CACODYLATE REMARK 280 BUFFER, PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.92933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 97.85867 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 97.85867 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 48.92933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 291 REMARK 465 LEU A 292 REMARK 465 TYR A 293 REMARK 465 PHE A 294 REMARK 465 GLN A 295 REMARK 465 GLY B 387 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 856 O HOH A 865 1.62 REMARK 500 O HOH B 675 O HOH B 841 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 98 CD GLU A 98 OE2 0.067 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 105 CG - SD - CE ANGL. DEV. = -14.6 DEGREES REMARK 500 ARG B 54 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 CYS B 261 CB - CA - C ANGL. DEV. = 9.6 DEGREES REMARK 500 ARG B 348 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 4 -45.34 70.49 REMARK 500 HIS A 42 10.69 81.72 REMARK 500 LYS A 65 19.28 59.18 REMARK 500 GLU A 132 -51.07 -127.27 REMARK 500 TYR A 170 -157.59 -116.31 REMARK 500 SER A 173 -71.99 -82.11 REMARK 500 ALA A 187 -147.57 -135.17 REMARK 500 MET A 245 72.94 -102.96 REMARK 500 ALA B 281 -165.57 -116.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CPX_90676_90715 RELATED DB: TARGETTRACK DBREF1 6MEL A 1 289 UNP A0A2U0Q9D2_CAMJU DBREF2 6MEL A A0A2U0Q9D2 1 289 DBREF 6MEL B 1 387 UNP Q5HVN3 SUCC_CAMJR 1 387 SEQADV 6MEL GLU A 290 UNP A0A2U0Q9D EXPRESSION TAG SEQADV 6MEL ASN A 291 UNP A0A2U0Q9D EXPRESSION TAG SEQADV 6MEL LEU A 292 UNP A0A2U0Q9D EXPRESSION TAG SEQADV 6MEL TYR A 293 UNP A0A2U0Q9D EXPRESSION TAG SEQADV 6MEL PHE A 294 UNP A0A2U0Q9D EXPRESSION TAG SEQADV 6MEL GLN A 295 UNP A0A2U0Q9D EXPRESSION TAG SEQRES 1 A 295 MET SER ILE LEU VAL ASN LYS ASN THR LYS VAL ILE VAL SEQRES 2 A 295 GLN GLY PHE THR GLY LYS GLU ALA THR PHE HIS ALA GLU SEQRES 3 A 295 GLN CYS MET ALA TYR GLY THR ASN ILE VAL GLY GLY ILE SEQRES 4 A 295 THR PRO HIS LYS GLY GLY GLN THR HIS LEU GLY LYS PRO SEQRES 5 A 295 VAL PHE ASP THR VAL ALA ASP ALA VAL LYS ALA THR LYS SEQRES 6 A 295 ALA ASP VAL SER LEU ILE PHE VAL PRO ALA PHE ALA VAL SEQRES 7 A 295 GLY ASP SER VAL ILE GLU ALA ALA ASP ALA GLY ILE LYS SEQRES 8 A 295 LEU ALA VAL VAL ILE THR GLU HIS THR PRO VAL LYS ASP SEQRES 9 A 295 MET MET PHE ALA LYS GLN TYR ALA ASN LYS LYS GLY MET SEQRES 10 A 295 LYS ILE ILE GLY PRO ASN CYS PRO GLY ILE ILE THR SER SEQRES 11 A 295 GLU GLU CYS LYS LEU GLY ILE MET PRO GLY PHE ILE PHE SEQRES 12 A 295 LYS LYS GLY CYS VAL GLY LEU ILE SER LYS SER GLY THR SEQRES 13 A 295 LEU THR TYR GLU ALA ALA ASN GLN VAL VAL GLN GLY GLY SEQRES 14 A 295 TYR GLY ILE SER THR ALA VAL GLY ILE GLY GLY ASP PRO SEQRES 15 A 295 ILE ILE GLY LEU ALA TYR LYS GLU LEU LEU SER GLU PHE SEQRES 16 A 295 GLN LYS ASP ASP GLU THR LYS ALA ILE VAL MET ILE GLY SEQRES 17 A 295 GLU ILE GLY GLY SER LEU GLU VAL GLU ALA ALA LYS PHE SEQRES 18 A 295 ILE LYS GLU ASN ILE SER LYS PRO VAL VAL ALA PHE ILE SEQRES 19 A 295 ALA GLY ALA THR ALA PRO LYS GLY LYS ARG MET GLY HIS SEQRES 20 A 295 ALA GLY ALA ILE VAL GLY SER ALA ASP GLU SER ALA ALA SEQRES 21 A 295 ALA LYS LYS GLU ALA LEU LYS SER TYR GLY ILE HIS VAL SEQRES 22 A 295 VAL ASP SER PRO ALA LEU ILE GLY GLU GLU ILE GLN LYS SEQRES 23 A 295 ILE LEU GLY GLU ASN LEU TYR PHE GLN SEQRES 1 B 387 MET ASN ILE HIS GLU TYR GLN ALA LYS ALA ILE PHE VAL SEQRES 2 B 387 ASP ASN GLY ILE PRO THR LEU LYS GLY LYS VAL ALA PHE SEQRES 3 B 387 SER VAL ASP GLU ALA VAL ALA ASN ALA LYS GLU LEU GLY SEQRES 4 B 387 GLY SER VAL TRP ALA VAL LYS ALA GLN ILE HIS ALA GLY SEQRES 5 B 387 GLY ARG GLY LEU GLY GLY GLY VAL LYS ILE ALA LYS ASN SEQRES 6 B 387 LEU ASP GLU VAL LYS ASP TYR ALA SER LYS ILE LEU GLY SEQRES 7 B 387 MET ASN LEU VAL THR HIS GLN THR GLY PRO GLU GLY LYS SEQRES 8 B 387 LEU VAL GLN LYS LEU TYR ILE GLU SER GLY ALA ASN ILE SEQRES 9 B 387 VAL LYS GLU TYR TYR LEU ALA ILE LEU PHE ASN ARG MET SEQRES 10 B 387 ALA GLU GLN ILE THR ILE ILE ALA SER SER GLU GLY GLY SEQRES 11 B 387 MET ASP ILE GLU LYS VAL ALA LYS GLU SER PRO GLU LYS SEQRES 12 B 387 ILE ALA LYS VAL GLY ILE ASP PRO GLN ILE GLY PHE LYS SEQRES 13 B 387 MET PHE HIS GLY LEU GLU VAL ALA ARG VAL LEU GLY LEU SEQRES 14 B 387 ASP LYS ASP GLU GLY LYS LYS LEU ILE SER MET ILE ALA SEQRES 15 B 387 LYS LEU TYR LYS LEU TYR MET ASP LYS ASP MET ASN MET SEQRES 16 B 387 LEU GLU ILE ASN PRO LEU ILE LYS THR ALA GLU GLY ASP SEQRES 17 B 387 PHE TYR ALA LEU ASP ALA LYS CYS SER PHE ASP ASP SER SEQRES 18 B 387 ALA LEU TYR ARG HIS PRO GLU ILE ALA GLU LEU ARG ASP SEQRES 19 B 387 THR THR GLU GLU ASN PRO ALA GLU ARG GLU ALA ALA GLU SEQRES 20 B 387 PHE GLY LEU SER TYR VAL LYS LEU ASP GLY ASP VAL ALA SEQRES 21 B 387 CYS MET VAL ASN GLY ALA GLY LEU ALA MET ALA THR MET SEQRES 22 B 387 ASP ILE ILE ASN TYR SER GLY ALA LYS PRO ALA ASN PHE SEQRES 23 B 387 LEU ASP VAL GLY GLY GLY ALA SER PRO GLU THR VAL ALA SEQRES 24 B 387 LYS ALA PHE GLU ILE ILE LEU ARG ASP LYS ASN VAL LYS SEQRES 25 B 387 VAL ILE PHE ILE ASN ILE PHE GLY GLY ILE VAL ARG CYS SEQRES 26 B 387 ASP ARG ILE ALA ASN GLY ILE LEU GLU ALA THR LYS ASN SEQRES 27 B 387 VAL GLU VAL ASN ILE PRO ILE VAL VAL ARG LEU ASP GLY SEQRES 28 B 387 THR ASN ALA ALA GLU ALA LYS THR ILE LEU ASP ASN SER SEQRES 29 B 387 ASN LEU LYS ASN ILE LYS ALA ALA THR ASN LEU LYS ASN SEQRES 30 B 387 GLY ALA GLU LEU VAL LYS SER LEU VAL GLY HET CL A 601 1 HET CIT B 501 13 HETNAM CL CHLORIDE ION HETNAM CIT CITRIC ACID FORMUL 3 CL CL 1- FORMUL 4 CIT C6 H8 O7 FORMUL 5 HOH *459(H2 O) HELIX 1 AA1 GLY A 18 GLY A 32 1 15 HELIX 2 AA2 THR A 56 LYS A 65 1 10 HELIX 3 AA3 PRO A 74 PHE A 76 5 3 HELIX 4 AA4 ALA A 77 ALA A 88 1 12 HELIX 5 AA5 PRO A 101 GLY A 116 1 16 HELIX 6 AA6 PRO A 139 PHE A 143 5 5 HELIX 7 AA7 GLY A 155 GLY A 168 1 14 HELIX 8 AA8 ALA A 187 ASP A 198 1 12 HELIX 9 AA9 SER A 213 ILE A 226 1 14 HELIX 10 AB1 SER A 254 GLU A 257 5 4 HELIX 11 AB2 SER A 258 TYR A 269 1 12 HELIX 12 AB3 SER A 276 ALA A 278 5 3 HELIX 13 AB4 LEU A 279 GLY A 289 1 11 HELIX 14 AB5 HIS B 4 ASN B 15 1 12 HELIX 15 AB6 SER B 27 GLY B 39 1 13 HELIX 16 AB7 GLY B 53 GLY B 58 1 6 HELIX 17 AB8 ASN B 65 LEU B 77 1 13 HELIX 18 AB9 ASP B 132 SER B 140 1 9 HELIX 19 AC1 LYS B 156 LEU B 167 1 12 HELIX 20 AC2 ASP B 170 LYS B 191 1 22 HELIX 21 AC3 ASP B 220 ARG B 225 5 6 HELIX 22 AC4 HIS B 226 GLU B 231 1 6 HELIX 23 AC5 LEU B 232 ARG B 233 5 2 HELIX 24 AC6 ASP B 234 GLU B 238 5 5 HELIX 25 AC7 ASN B 239 PHE B 248 1 10 HELIX 26 AC8 GLY B 265 SER B 279 1 15 HELIX 27 AC9 SER B 294 LEU B 306 1 13 HELIX 28 AD1 ARG B 324 THR B 336 1 13 HELIX 29 AD2 ASN B 353 SER B 364 1 12 HELIX 30 AD3 ASN B 374 VAL B 386 1 13 SHEET 1 AA1 7 THR A 47 HIS A 48 0 SHEET 2 AA1 7 LYS A 51 PHE A 54 -1 O LYS A 51 N HIS A 48 SHEET 3 AA1 7 ASN A 34 ILE A 39 1 N GLY A 38 O PHE A 54 SHEET 4 AA1 7 LYS A 10 GLN A 14 1 N VAL A 13 O ILE A 39 SHEET 5 AA1 7 VAL A 68 ILE A 71 1 O LEU A 70 N ILE A 12 SHEET 6 AA1 7 LEU A 92 VAL A 95 1 O VAL A 94 N ILE A 71 SHEET 7 AA1 7 LYS A 118 ILE A 120 1 O ILE A 120 N VAL A 95 SHEET 1 AA2 7 CYS A 133 GLY A 136 0 SHEET 2 AA2 7 GLY A 126 THR A 129 -1 N ILE A 127 O LEU A 135 SHEET 3 AA2 7 ILE A 172 GLY A 177 -1 O GLY A 177 N GLY A 126 SHEET 4 AA2 7 VAL A 148 SER A 152 1 N LEU A 150 O VAL A 176 SHEET 5 AA2 7 ALA A 203 GLU A 209 1 O VAL A 205 N GLY A 149 SHEET 6 AA2 7 VAL A 230 ALA A 235 1 O VAL A 231 N MET A 206 SHEET 7 AA2 7 HIS A 272 VAL A 273 1 O HIS A 272 N VAL A 230 SHEET 1 AA3 4 GLY B 22 ALA B 25 0 SHEET 2 AA3 4 LEU B 96 SER B 100 -1 O LEU B 96 N ALA B 25 SHEET 3 AA3 4 TRP B 43 ALA B 47 -1 N ALA B 44 O GLU B 99 SHEET 4 AA3 4 VAL B 60 ALA B 63 -1 O LYS B 61 N VAL B 45 SHEET 1 AA4 2 ASN B 80 LEU B 81 0 SHEET 2 AA4 2 LYS B 91 LEU B 92 -1 O LYS B 91 N LEU B 81 SHEET 1 AA5 5 ILE B 144 ILE B 149 0 SHEET 2 AA5 5 GLN B 120 SER B 126 -1 N ILE B 121 O ILE B 149 SHEET 3 AA5 5 ILE B 104 ASN B 115 -1 N ASN B 115 O GLN B 120 SHEET 4 AA5 5 MET B 193 THR B 204 -1 O ILE B 198 N LEU B 110 SHEET 5 AA5 5 PHE B 209 ALA B 211 -1 O TYR B 210 N ILE B 202 SHEET 1 AA6 5 ILE B 144 ILE B 149 0 SHEET 2 AA6 5 GLN B 120 SER B 126 -1 N ILE B 121 O ILE B 149 SHEET 3 AA6 5 ILE B 104 ASN B 115 -1 N ASN B 115 O GLN B 120 SHEET 4 AA6 5 MET B 193 THR B 204 -1 O ILE B 198 N LEU B 110 SHEET 5 AA6 5 LYS B 215 PHE B 218 -1 O LYS B 215 N GLU B 197 SHEET 1 AA7 2 SER B 251 LYS B 254 0 SHEET 2 AA7 2 ASN B 285 ASP B 288 -1 O PHE B 286 N VAL B 253 SHEET 1 AA8 4 VAL B 259 VAL B 263 0 SHEET 2 AA8 4 VAL B 313 GLY B 320 1 O PHE B 315 N ALA B 260 SHEET 3 AA8 4 ILE B 345 GLY B 351 1 O ARG B 348 N ILE B 316 SHEET 4 AA8 4 ILE B 369 ALA B 372 1 O LYS B 370 N ILE B 345 CISPEP 1 GLY A 121 PRO A 122 0 4.40 CISPEP 2 ASN B 199 PRO B 200 0 2.67 SITE 1 AC1 6 SER A 154 GLY A 155 HIS A 247 HOH A 788 SITE 2 AC1 6 ALA B 266 GLY B 267 SITE 1 AC2 13 HOH A 796 ASN B 264 GLY B 290 GLY B 291 SITE 2 AC2 13 GLY B 292 GLY B 321 ILE B 322 VAL B 323 SITE 3 AC2 13 HOH B 636 HOH B 666 HOH B 675 HOH B 677 SITE 4 AC2 13 HOH B 684 CRYST1 123.072 123.072 146.788 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008125 0.004691 0.000000 0.00000 SCALE2 0.000000 0.009382 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006813 0.00000