HEADER MEMBRANE PROTEIN 17-SEP-18 6MH8 TITLE HIGH-VISCOSITY INJECTOR-BASED PINK BEAM SERIAL CRYSTALLOGRAPHY OF TITLE 2 MICRO-CRYSTALS AT A SYNCHROTRON RADIATION SOURCE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENOSINE RECEPTOR A2A, SOLUBLE CYTOCHROME B562 CHIMERIC COMPND 3 CONSTRUCT; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: CYTOCHROME B-562; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, ESCHERICHIA COLI; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606, 562; SOURCE 5 GENE: ADORA2A, ADORA2, CYBC; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS GPCR, PINK BEAM SERIAL CRYSTALLOGRAPHY, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.M.MARTIN-GARCIA,L.ZHU,D.MENDEZ,M.LEE,E.CHUN,C.LI,H.HU, AUTHOR 2 G.SUBRAMANIAN,D.KISSICK,C.OGATA,R.HENNING,A.ISHCHENKO,Z.DOBSON, AUTHOR 3 S.ZHAN,U.WEIERSTALL,J.C.H.SPENCE,P.FROMME,N.A.ZATSEPIN, AUTHOR 4 R.F.FISCHETTI,V.CHEREZOV,W.LIU REVDAT 7 01-NOV-23 6MH8 1 REMARK REVDAT 6 11-OCT-23 6MH8 1 REMARK REVDAT 5 27-NOV-19 6MH8 1 REMARK REVDAT 4 06-NOV-19 6MH8 1 REMARK REVDAT 3 21-AUG-19 6MH8 1 REMARK REVDAT 2 29-MAY-19 6MH8 1 JRNL REVDAT 1 24-APR-19 6MH8 0 JRNL AUTH J.M.MARTIN-GARCIA,L.ZHU,D.MENDEZ,M.Y.LEE,E.CHUN,C.LI,H.HU, JRNL AUTH 2 G.SUBRAMANIAN,D.KISSICK,C.OGATA,R.HENNING,A.ISHCHENKO, JRNL AUTH 3 Z.DOBSON,S.ZHANG,U.WEIERSTALL,J.C.H.SPENCE,P.FROMME, JRNL AUTH 4 N.A.ZATSEPIN,R.F.FISCHETTI,V.CHEREZOV,W.LIU JRNL TITL HIGH-VISCOSITY INJECTOR-BASED PINK-BEAM SERIAL JRNL TITL 2 CRYSTALLOGRAPHY OF MICROCRYSTALS AT A SYNCHROTRON RADIATION JRNL TITL 3 SOURCE. JRNL REF IUCRJ V. 6 412 2019 JRNL REFN ESSN 2052-2525 JRNL PMID 31098022 JRNL DOI 10.1107/S205225251900263X REMARK 2 REMARK 2 RESOLUTION. 4.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 87.8 REMARK 3 NUMBER OF REFLECTIONS : 3179 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.254 REMARK 3 R VALUE (WORKING SET) : 0.250 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 353 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 4.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 4.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 209 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.84 REMARK 3 BIN R VALUE (WORKING SET) : 0.2080 REMARK 3 BIN FREE R VALUE SET COUNT : 22 REMARK 3 BIN FREE R VALUE : 0.2380 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2978 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.74000 REMARK 3 B22 (A**2) : 0.82000 REMARK 3 B33 (A**2) : -0.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 1.270 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 1.114 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 84.914 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.841 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.798 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3073 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2985 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4192 ; 1.043 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6789 ; 0.861 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 387 ; 4.073 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 117 ;39.518 ;23.675 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 475 ;11.458 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;15.128 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 499 ; 0.045 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3466 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 731 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1560 ; 2.402 ; 5.951 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1559 ; 2.382 ; 5.946 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1943 ; 4.222 ; 8.906 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1944 ; 4.223 ; 8.911 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1513 ; 1.853 ; 5.922 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1514 ; 1.852 ; 5.921 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2250 ; 3.470 ; 8.820 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 13268 ;11.522 ;54.854 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 13269 ;11.522 ;54.853 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6MH8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1000236951. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : L REMARK 200 WAVELENGTH OR RANGE (A) : 1.033-1.67 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX340-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTFEL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4021 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.8 REMARK 200 DATA REDUNDANCY : 11.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.30 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: LAUE REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5UVI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM CITRATE PH 5.0, PEG 400, SODIUM REMARK 280 THIOCYANATE, LIPIDIC CUBIC PHASE, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 20.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 89.50000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 20.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 89.50000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 71.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 20.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 89.50000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 71.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 20.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 89.50000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -24 REMARK 465 LYS A -23 REMARK 465 THR A -22 REMARK 465 ILE A -21 REMARK 465 ILE A -20 REMARK 465 ALA A -19 REMARK 465 LEU A -18 REMARK 465 SER A -17 REMARK 465 TYR A -16 REMARK 465 ILE A -15 REMARK 465 PHE A -14 REMARK 465 CYS A -13 REMARK 465 LEU A -12 REMARK 465 VAL A -11 REMARK 465 PHE A -10 REMARK 465 ALA A -9 REMARK 465 ASP A -8 REMARK 465 TYR A -7 REMARK 465 LYS A -6 REMARK 465 ASP A -5 REMARK 465 ASP A -4 REMARK 465 ASP A -3 REMARK 465 THR A 1044 REMARK 465 PRO A 1045 REMARK 465 PRO A 1046 REMARK 465 LYS A 1047 REMARK 465 LEU A 1048 REMARK 465 GLU A 1049 REMARK 465 ASP A 1050 REMARK 465 LYS A 1051 REMARK 465 SER A 1052 REMARK 465 PRO A 1053 REMARK 465 ASP A 1054 REMARK 465 SER A 1055 REMARK 465 PRO A 1056 REMARK 465 GLU A 1057 REMARK 465 MET A 1058 REMARK 465 LYS A 1059 REMARK 465 ARG A 309 REMARK 465 GLN A 310 REMARK 465 GLN A 311 REMARK 465 GLU A 312 REMARK 465 PRO A 313 REMARK 465 PHE A 314 REMARK 465 LYS A 315 REMARK 465 ALA A 316 REMARK 465 HIS A 317 REMARK 465 HIS A 318 REMARK 465 HIS A 319 REMARK 465 HIS A 320 REMARK 465 HIS A 321 REMARK 465 HIS A 322 REMARK 465 HIS A 323 REMARK 465 HIS A 324 REMARK 465 HIS A 325 REMARK 465 HIS A 326 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 111 CD NE CZ NH1 NH2 REMARK 470 GLN A 148 CG CD OE1 NE2 REMARK 470 GLU A 151 CG CD OE1 OE2 REMARK 470 GLU A 161 CG CD OE1 OE2 REMARK 470 ARG A 206 CD NE CZ NH1 NH2 REMARK 470 LYS A1015 CG CD CE NZ REMARK 470 LYS A1019 CG CD CE NZ REMARK 470 ASP A1021 CG OD1 OD2 REMARK 470 GLN A1025 CG CD OE1 NE2 REMARK 470 ASP A1060 CG OD1 OD2 REMARK 470 ARG A1062 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1077 CG CD CE NZ REMARK 470 ARG A 222 NE CZ NH1 NH2 REMARK 470 LYS A 227 CG CD CE NZ REMARK 470 LYS A 301 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD22 ASN A 34 HG1 THR A 298 1.28 REMARK 500 O ILE A 303 C LEU A 308 1.81 REMARK 500 O GLN A 1093 OG1 THR A 1096 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LEU A 208 C ALA A1001 N 0.160 REMARK 500 LEU A1106 C GLU A 219 N 0.159 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 38 75.68 -102.76 REMARK 500 LEU A 58 -52.34 -124.15 REMARK 500 VAL A 186 -53.62 -128.44 REMARK 500 VAL A1084 -71.69 -80.96 REMARK 500 TYR A1101 -60.02 -139.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZMA A 1201 DBREF 6MH8 A 2 208 UNP P29274 AA2AR_HUMAN 2 208 DBREF 6MH8 A 1001 1105 UNP P0ABE7 C562_ECOLX 23 127 DBREF 6MH8 A 219 316 UNP P29274 AA2AR_HUMAN 219 316 SEQADV 6MH8 MET A -24 UNP P29274 INITIATING METHIONINE SEQADV 6MH8 LYS A -23 UNP P29274 EXPRESSION TAG SEQADV 6MH8 THR A -22 UNP P29274 EXPRESSION TAG SEQADV 6MH8 ILE A -21 UNP P29274 EXPRESSION TAG SEQADV 6MH8 ILE A -20 UNP P29274 EXPRESSION TAG SEQADV 6MH8 ALA A -19 UNP P29274 EXPRESSION TAG SEQADV 6MH8 LEU A -18 UNP P29274 EXPRESSION TAG SEQADV 6MH8 SER A -17 UNP P29274 EXPRESSION TAG SEQADV 6MH8 TYR A -16 UNP P29274 EXPRESSION TAG SEQADV 6MH8 ILE A -15 UNP P29274 EXPRESSION TAG SEQADV 6MH8 PHE A -14 UNP P29274 EXPRESSION TAG SEQADV 6MH8 CYS A -13 UNP P29274 EXPRESSION TAG SEQADV 6MH8 LEU A -12 UNP P29274 EXPRESSION TAG SEQADV 6MH8 VAL A -11 UNP P29274 EXPRESSION TAG SEQADV 6MH8 PHE A -10 UNP P29274 EXPRESSION TAG SEQADV 6MH8 ALA A -9 UNP P29274 EXPRESSION TAG SEQADV 6MH8 ASP A -8 UNP P29274 EXPRESSION TAG SEQADV 6MH8 TYR A -7 UNP P29274 EXPRESSION TAG SEQADV 6MH8 LYS A -6 UNP P29274 EXPRESSION TAG SEQADV 6MH8 ASP A -5 UNP P29274 EXPRESSION TAG SEQADV 6MH8 ASP A -4 UNP P29274 EXPRESSION TAG SEQADV 6MH8 ASP A -3 UNP P29274 EXPRESSION TAG SEQADV 6MH8 ASP A -2 UNP P29274 EXPRESSION TAG SEQADV 6MH8 GLY A -1 UNP P29274 EXPRESSION TAG SEQADV 6MH8 ALA A 0 UNP P29274 EXPRESSION TAG SEQADV 6MH8 PRO A 1 UNP P29274 EXPRESSION TAG SEQADV 6MH8 TRP A 1007 UNP P0ABE7 MET 29 CONFLICT SEQADV 6MH8 ILE A 1102 UNP P0ABE7 HIS 124 CONFLICT SEQADV 6MH8 LEU A 1106 UNP P0ABE7 LINKER SEQADV 6MH8 HIS A 317 UNP P29274 EXPRESSION TAG SEQADV 6MH8 HIS A 318 UNP P29274 EXPRESSION TAG SEQADV 6MH8 HIS A 319 UNP P29274 EXPRESSION TAG SEQADV 6MH8 HIS A 320 UNP P29274 EXPRESSION TAG SEQADV 6MH8 HIS A 321 UNP P29274 EXPRESSION TAG SEQADV 6MH8 HIS A 322 UNP P29274 EXPRESSION TAG SEQADV 6MH8 HIS A 323 UNP P29274 EXPRESSION TAG SEQADV 6MH8 HIS A 324 UNP P29274 EXPRESSION TAG SEQADV 6MH8 HIS A 325 UNP P29274 EXPRESSION TAG SEQADV 6MH8 HIS A 326 UNP P29274 EXPRESSION TAG SEQRES 1 A 447 MET LYS THR ILE ILE ALA LEU SER TYR ILE PHE CYS LEU SEQRES 2 A 447 VAL PHE ALA ASP TYR LYS ASP ASP ASP ASP GLY ALA PRO SEQRES 3 A 447 PRO ILE MET GLY SER SER VAL TYR ILE THR VAL GLU LEU SEQRES 4 A 447 ALA ILE ALA VAL LEU ALA ILE LEU GLY ASN VAL LEU VAL SEQRES 5 A 447 CYS TRP ALA VAL TRP LEU ASN SER ASN LEU GLN ASN VAL SEQRES 6 A 447 THR ASN TYR PHE VAL VAL SER LEU ALA ALA ALA ASP ILE SEQRES 7 A 447 ALA VAL GLY VAL LEU ALA ILE PRO PHE ALA ILE THR ILE SEQRES 8 A 447 SER THR GLY PHE CYS ALA ALA CYS HIS GLY CYS LEU PHE SEQRES 9 A 447 ILE ALA CYS PHE VAL LEU VAL LEU THR GLN SER SER ILE SEQRES 10 A 447 PHE SER LEU LEU ALA ILE ALA ILE ASP ARG TYR ILE ALA SEQRES 11 A 447 ILE ARG ILE PRO LEU ARG TYR ASN GLY LEU VAL THR GLY SEQRES 12 A 447 THR ARG ALA LYS GLY ILE ILE ALA ILE CYS TRP VAL LEU SEQRES 13 A 447 SER PHE ALA ILE GLY LEU THR PRO MET LEU GLY TRP ASN SEQRES 14 A 447 ASN CYS GLY GLN PRO LYS GLU GLY LYS ASN HIS SER GLN SEQRES 15 A 447 GLY CYS GLY GLU GLY GLN VAL ALA CYS LEU PHE GLU ASP SEQRES 16 A 447 VAL VAL PRO MET ASN TYR MET VAL TYR PHE ASN PHE PHE SEQRES 17 A 447 ALA CYS VAL LEU VAL PRO LEU LEU LEU MET LEU GLY VAL SEQRES 18 A 447 TYR LEU ARG ILE PHE LEU ALA ALA ARG ARG GLN LEU ALA SEQRES 19 A 447 ASP LEU GLU ASP ASN TRP GLU THR LEU ASN ASP ASN LEU SEQRES 20 A 447 LYS VAL ILE GLU LYS ALA ASP ASN ALA ALA GLN VAL LYS SEQRES 21 A 447 ASP ALA LEU THR LYS MET ARG ALA ALA ALA LEU ASP ALA SEQRES 22 A 447 GLN LYS ALA THR PRO PRO LYS LEU GLU ASP LYS SER PRO SEQRES 23 A 447 ASP SER PRO GLU MET LYS ASP PHE ARG HIS GLY PHE ASP SEQRES 24 A 447 ILE LEU VAL GLY GLN ILE ASP ASP ALA LEU LYS LEU ALA SEQRES 25 A 447 ASN GLU GLY LYS VAL LYS GLU ALA GLN ALA ALA ALA GLU SEQRES 26 A 447 GLN LEU LYS THR THR ARG ASN ALA TYR ILE GLN LYS TYR SEQRES 27 A 447 LEU GLU ARG ALA ARG SER THR LEU GLN LYS GLU VAL HIS SEQRES 28 A 447 ALA ALA LYS SER LEU ALA ILE ILE VAL GLY LEU PHE ALA SEQRES 29 A 447 LEU CYS TRP LEU PRO LEU HIS ILE ILE ASN CYS PHE THR SEQRES 30 A 447 PHE PHE CYS PRO ASP CYS SER HIS ALA PRO LEU TRP LEU SEQRES 31 A 447 MET TYR LEU ALA ILE VAL LEU SER HIS THR ASN SER VAL SEQRES 32 A 447 VAL ASN PRO PHE ILE TYR ALA TYR ARG ILE ARG GLU PHE SEQRES 33 A 447 ARG GLN THR PHE ARG LYS ILE ILE ARG SER HIS VAL LEU SEQRES 34 A 447 ARG GLN GLN GLU PRO PHE LYS ALA HIS HIS HIS HIS HIS SEQRES 35 A 447 HIS HIS HIS HIS HIS HET ZMA A1201 40 HETNAM ZMA 4-{2-[(7-AMINO-2-FURAN-2-YL[1,2,4]TRIAZOLO[1,5-A][1,3, HETNAM 2 ZMA 5]TRIAZIN-5-YL)AMINO]ETHYL}PHENOL FORMUL 2 ZMA C16 H15 N7 O2 HELIX 1 AA1 PRO A 1 ASN A 34 1 34 HELIX 2 AA2 ASN A 39 LEU A 58 1 20 HELIX 3 AA3 LEU A 58 SER A 67 1 10 HELIX 4 AA4 ALA A 73 ILE A 108 1 36 HELIX 5 AA5 ARG A 111 VAL A 116 1 6 HELIX 6 AA6 THR A 117 LEU A 137 1 21 HELIX 7 AA7 THR A 138 GLY A 142 5 5 HELIX 8 AA8 LYS A 150 GLN A 157 1 8 HELIX 9 AA9 LEU A 167 VAL A 172 1 6 HELIX 10 AB1 PRO A 173 TYR A 179 1 7 HELIX 11 AB2 VAL A 186 ALA A 1020 1 43 HELIX 12 AB3 ASN A 1022 GLN A 1041 1 20 HELIX 13 AB4 PHE A 1061 GLU A 1081 1 21 HELIX 14 AB5 LYS A 1083 ALA A 1091 1 9 HELIX 15 AB6 GLN A 1093 TYR A 1101 1 9 HELIX 16 AB7 TYR A 1101 PHE A 258 1 46 HELIX 17 AB8 PRO A 266 ILE A 292 1 27 HELIX 18 AB9 ILE A 292 ARG A 304 1 13 SHEET 1 AA1 2 CYS A 71 ALA A 72 0 SHEET 2 AA1 2 VAL A 164 ALA A 165 -1 O VAL A 164 N ALA A 72 SSBOND 1 CYS A 71 CYS A 159 1555 1555 2.04 SSBOND 2 CYS A 74 CYS A 146 1555 1555 2.02 SSBOND 3 CYS A 77 CYS A 166 1555 1555 2.05 SSBOND 4 CYS A 259 CYS A 262 1555 1555 2.03 SITE 1 AC1 7 PHE A 168 GLU A 169 MET A 177 TRP A 246 SITE 2 AC1 7 ASN A 253 MET A 270 ILE A 274 CRYST1 40.000 179.000 142.000 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025000 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005587 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007042 0.00000