HEADER LYASE 24-SEP-18 6MK3 TITLE CRYSTALLOGRAPHIC SOLVENT MAPPING ANALYSIS OF DMSO BOUND TO APE1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 40-318; COMPND 5 SYNONYM: APEX NUCLEASE, APEN, APURINIC-APYRIMIDINIC ENDONUCLEASE 1, COMPND 6 APE-1, REF-1, REDOX FACTOR-1; COMPND 7 EC: 3.1.-.-,4.2.99.18; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: APEX1, APE, APE1, APEX, APX, HAP1, REF1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS APURINIC/APYRIMIDINIC ENDONUCLEASE, DNA REPAIR, ABASIC SITE, SOLVENT KEYWDS 2 MAPPING, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR M.M.GEORGIADIS,H.HE,Q.CHEN REVDAT 4 13-MAR-24 6MK3 1 REMARK REVDAT 3 04-DEC-19 6MK3 1 REMARK REVDAT 2 13-MAR-19 6MK3 1 JRNL REVDAT 1 30-JAN-19 6MK3 0 JRNL AUTH R.TRILLES,D.BEGLOV,Q.CHEN,H.HE,R.WIREMAN,A.REED, JRNL AUTH 2 S.CHENNAMADHAVUNI,J.S.PANEK,L.E.BROWN,S.VAJDA,J.A.PORCO JR., JRNL AUTH 3 M.R.KELLEY,M.M.GEORGIADIS JRNL TITL DISCOVERY OF MACROCYCLIC INHIBITORS OF APURINIC/APYRIMIDINIC JRNL TITL 2 ENDONUCLEASE 1. JRNL REF J. MED. CHEM. V. 62 1971 2019 JRNL REFN ISSN 1520-4804 JRNL PMID 30653918 JRNL DOI 10.1021/ACS.JMEDCHEM.8B01529 REMARK 2 REMARK 2 RESOLUTION. 1.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 48386 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2454 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.8299 - 3.8733 0.88 2481 131 0.1747 0.1983 REMARK 3 2 3.8733 - 3.0748 0.87 2342 125 0.1612 0.1708 REMARK 3 3 3.0748 - 2.6862 0.93 2472 128 0.1732 0.1990 REMARK 3 4 2.6862 - 2.4407 0.96 2555 121 0.1814 0.2179 REMARK 3 5 2.4407 - 2.2658 0.99 2571 159 0.1841 0.2193 REMARK 3 6 2.2658 - 2.1322 1.00 2617 140 0.1854 0.2196 REMARK 3 7 2.1322 - 2.0254 1.00 2597 135 0.1832 0.2020 REMARK 3 8 2.0254 - 1.9372 1.00 2624 128 0.1808 0.2046 REMARK 3 9 1.9372 - 1.8627 1.00 2602 116 0.1818 0.1908 REMARK 3 10 1.8627 - 1.7984 1.00 2609 136 0.1900 0.2196 REMARK 3 11 1.7984 - 1.7422 1.00 2598 147 0.1988 0.2666 REMARK 3 12 1.7422 - 1.6924 1.00 2562 154 0.2075 0.2552 REMARK 3 13 1.6924 - 1.6478 1.00 2593 137 0.2048 0.2318 REMARK 3 14 1.6478 - 1.6076 1.00 2577 141 0.2136 0.2549 REMARK 3 15 1.6076 - 1.5711 1.00 2576 141 0.2126 0.2435 REMARK 3 16 1.5711 - 1.5376 1.00 2584 137 0.2283 0.2475 REMARK 3 17 1.5376 - 1.5069 1.00 2540 135 0.2470 0.2696 REMARK 3 18 1.5069 - 1.4784 0.94 2432 143 0.2729 0.3481 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.41 REMARK 3 B_SOL : 67.07 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.410 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.42 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.61020 REMARK 3 B22 (A**2) : 4.36750 REMARK 3 B33 (A**2) : 0.24260 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2356 REMARK 3 ANGLE : 1.029 3197 REMARK 3 CHIRALITY : 0.070 336 REMARK 3 PLANARITY : 0.005 419 REMARK 3 DIHEDRAL : 15.818 872 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6MK3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1000237088. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-AUG-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 130 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48453 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.478 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.48 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES, PH 6.0, 200 MM SODIUM REMARK 280 CHLORIDE, 18-21% PEG4000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 23.29150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 68.89450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.29150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 68.89450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 748 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 34 REMARK 465 SER A 35 REMARK 465 HIS A 36 REMARK 465 MET A 37 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 111 64.81 -116.43 REMARK 500 SER A 129 -142.52 48.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 DBREF 6MK3 A 40 318 UNP P27695 APEX1_HUMAN 40 318 SEQADV 6MK3 GLY A 34 UNP P27695 EXPRESSION TAG SEQADV 6MK3 SER A 35 UNP P27695 EXPRESSION TAG SEQADV 6MK3 HIS A 36 UNP P27695 EXPRESSION TAG SEQADV 6MK3 MET A 37 UNP P27695 EXPRESSION TAG SEQADV 6MK3 ALA A 38 UNP P27695 EXPRESSION TAG SEQADV 6MK3 SER A 39 UNP P27695 EXPRESSION TAG SEQADV 6MK3 ALA A 138 UNP P27695 CYS 138 CONFLICT SEQRES 1 A 285 GLY SER HIS MET ALA SER GLU GLY PRO ALA LEU TYR GLU SEQRES 2 A 285 ASP PRO PRO ASP GLN LYS THR SER PRO SER GLY LYS PRO SEQRES 3 A 285 ALA THR LEU LYS ILE CYS SER TRP ASN VAL ASP GLY LEU SEQRES 4 A 285 ARG ALA TRP ILE LYS LYS LYS GLY LEU ASP TRP VAL LYS SEQRES 5 A 285 GLU GLU ALA PRO ASP ILE LEU CYS LEU GLN GLU THR LYS SEQRES 6 A 285 CYS SER GLU ASN LYS LEU PRO ALA GLU LEU GLN GLU LEU SEQRES 7 A 285 PRO GLY LEU SER HIS GLN TYR TRP SER ALA PRO SER ASP SEQRES 8 A 285 LYS GLU GLY TYR SER GLY VAL GLY LEU LEU SER ARG GLN SEQRES 9 A 285 ALA PRO LEU LYS VAL SER TYR GLY ILE GLY ASP GLU GLU SEQRES 10 A 285 HIS ASP GLN GLU GLY ARG VAL ILE VAL ALA GLU PHE ASP SEQRES 11 A 285 SER PHE VAL LEU VAL THR ALA TYR VAL PRO ASN ALA GLY SEQRES 12 A 285 ARG GLY LEU VAL ARG LEU GLU TYR ARG GLN ARG TRP ASP SEQRES 13 A 285 GLU ALA PHE ARG LYS PHE LEU LYS GLY LEU ALA SER ARG SEQRES 14 A 285 LYS PRO LEU VAL LEU CYS GLY ASP LEU ASN VAL ALA HIS SEQRES 15 A 285 GLU GLU ILE ASP LEU ARG ASN PRO LYS GLY ASN LYS LYS SEQRES 16 A 285 ASN ALA GLY PHE THR PRO GLN GLU ARG GLN GLY PHE GLY SEQRES 17 A 285 GLU LEU LEU GLN ALA VAL PRO LEU ALA ASP SER PHE ARG SEQRES 18 A 285 HIS LEU TYR PRO ASN THR PRO TYR ALA TYR THR PHE TRP SEQRES 19 A 285 THR TYR MET MET ASN ALA ARG SER LYS ASN VAL GLY TRP SEQRES 20 A 285 ARG LEU ASP TYR PHE LEU LEU SER HIS SER LEU LEU PRO SEQRES 21 A 285 ALA LEU CYS ASP SER LYS ILE ARG SER LYS ALA LEU GLY SEQRES 22 A 285 SER ASP HIS CYS PRO ILE THR LEU TYR LEU ALA LEU HET DMS A 401 4 HET DMS A 402 4 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HETNAM DMS DIMETHYL SULFOXIDE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 DMS 2(C2 H6 O S) FORMUL 4 EDO 3(C2 H6 O2) FORMUL 7 HOH *252(H2 O) HELIX 1 AA1 GLY A 71 LYS A 78 1 8 HELIX 2 AA2 LYS A 79 ALA A 88 1 10 HELIX 3 AA3 PRO A 105 SER A 115 5 11 HELIX 4 AA4 ASP A 148 ASP A 152 5 5 HELIX 5 AA5 GLY A 176 VAL A 180 5 5 HELIX 6 AA6 ARG A 181 SER A 201 1 21 HELIX 7 AA7 GLU A 216 LEU A 220 5 5 HELIX 8 AA8 THR A 233 VAL A 247 1 15 HELIX 9 AA9 SER A 252 TYR A 257 1 6 HELIX 10 AB1 HIS A 289 PRO A 293 5 5 SHEET 1 AA1 6 HIS A 116 SER A 120 0 SHEET 2 AA1 6 VAL A 131 SER A 135 -1 O LEU A 133 N TYR A 118 SHEET 3 AA1 6 ILE A 91 GLN A 95 -1 N LEU A 92 O LEU A 134 SHEET 4 AA1 6 LEU A 62 ASN A 68 1 N CYS A 65 O CYS A 93 SHEET 5 AA1 6 ILE A 312 LEU A 316 -1 O LEU A 314 N ILE A 64 SHEET 6 AA1 6 LEU A 295 ILE A 300 -1 N LYS A 299 O THR A 313 SHEET 1 AA2 6 LYS A 141 TYR A 144 0 SHEET 2 AA2 6 VAL A 157 GLU A 161 -1 O VAL A 159 N SER A 143 SHEET 3 AA2 6 VAL A 166 TYR A 171 -1 O LEU A 167 N ALA A 160 SHEET 4 AA2 6 LEU A 205 ASP A 210 1 O CYS A 208 N VAL A 168 SHEET 5 AA2 6 ASP A 283 LEU A 287 -1 O LEU A 286 N LEU A 207 SHEET 6 AA2 6 ALA A 250 ASP A 251 -1 N ALA A 250 O LEU A 287 CISPEP 1 VAL A 247 PRO A 248 0 -4.40 SITE 1 AC1 5 ASN A 174 ALA A 230 TRP A 280 LEU A 282 SITE 2 AC1 5 HOH A 606 SITE 1 AC2 6 GLN A 137 ALA A 138 PRO A 139 LEU A 140 SITE 2 AC2 6 PHE A 162 ASP A 163 SITE 1 AC3 5 HIS A 215 GLU A 216 ARG A 237 GLN A 238 SITE 2 AC3 5 GLY A 241 SITE 1 AC4 7 TYR A 45 TRP A 267 ARG A 274 ASN A 277 SITE 2 AC4 7 SER A 302 LYS A 303 HOH A 580 SITE 1 AC5 7 LYS A 78 TYR A 269 ARG A 274 LEU A 305 SITE 2 AC5 7 GLY A 306 SER A 307 HOH A 732 CRYST1 46.583 137.789 45.243 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021467 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007257 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022103 0.00000