HEADER TRANSCRIPTION/DNA 26-SEP-18 6ML3 TITLE ZBTB24 ZINC FINGERS 4-8 WITH 19+1MER DNA OLIGONUCLEOTIDE (SEQUENCE 2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZINC FINGER AND BTB DOMAIN-CONTAINING PROTEIN 24; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ZINC FINGERS 4-8 (UNP RESIDUES 375-519); COMPND 5 SYNONYM: BONE MORPHOGENETIC PROTEIN-INDUCED FACTOR 1, BRAIN-SPECIFIC COMPND 6 PROTEIN 1, ZINC FINGER PROTEIN 450; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'- COMPND 10 D(*AP*CP*GP*CP*AP*GP*GP*TP*CP*CP*TP*GP*GP*AP*AP*GP*CP*TP*AP*A)-3'); COMPND 11 CHAIN: E; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: DNA (5'- COMPND 15 D(*TP*TP*TP*AP*GP*CP*TP*TP*CP*CP*AP*GP*GP*AP*CP*CP*TP*GP*CP*G)-3'); COMPND 16 CHAIN: F; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: ZBTB24, BIF1, BSG1, ZNF450; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: MOUSE; SOURCE 12 ORGANISM_TAXID: 10090; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 16 ORGANISM_COMMON: MOUSE; SOURCE 17 ORGANISM_TAXID: 10090 KEYWDS PROTEIN-DNA COMPLEX, TRANSCRIPTION, TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.R.HORTON,X.CHENG,R.REN REVDAT 4 11-OCT-23 6ML3 1 REMARK REVDAT 3 01-JAN-20 6ML3 1 REMARK REVDAT 2 30-OCT-19 6ML3 1 JRNL REVDAT 1 03-JUL-19 6ML3 0 JRNL AUTH R.REN,S.HARDIKAR,J.R.HORTON,Y.LU,Y.ZENG,A.K.SINGH,K.LIN, JRNL AUTH 2 L.D.COLETTA,J.SHEN,C.S.LIN KONG,H.HASHIMOTO,X.ZHANG,T.CHEN, JRNL AUTH 3 X.CHENG JRNL TITL STRUCTURAL BASIS OF SPECIFIC DNA BINDING BY THE JRNL TITL 2 TRANSCRIPTION FACTOR ZBTB24. JRNL REF NUCLEIC ACIDS RES. V. 47 8388 2019 JRNL REFN ESSN 1362-4962 JRNL PMID 31226215 JRNL DOI 10.1093/NAR/GKZ557 REMARK 2 REMARK 2 RESOLUTION. 1.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 68.9 REMARK 3 NUMBER OF REFLECTIONS : 48114 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2426 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.3707 - 4.3260 0.95 3715 212 0.1584 0.1828 REMARK 3 2 4.3260 - 3.4343 0.98 3818 188 0.1770 0.2266 REMARK 3 3 3.4343 - 3.0004 0.97 3774 210 0.2416 0.2832 REMARK 3 4 3.0004 - 2.7262 0.93 3601 190 0.2673 0.3169 REMARK 3 5 2.7262 - 2.5308 0.93 3635 199 0.2799 0.2645 REMARK 3 6 2.5308 - 2.3816 0.96 3721 211 0.2782 0.2914 REMARK 3 7 2.3816 - 2.2624 0.98 3847 201 0.2821 0.3387 REMARK 3 8 2.2624 - 2.1639 0.97 3798 203 0.3158 0.3338 REMARK 3 9 2.1639 - 2.0806 0.96 3729 181 0.3160 0.3535 REMARK 3 10 2.0806 - 2.0088 0.89 3435 193 0.3454 0.3719 REMARK 3 11 2.0088 - 1.9460 0.61 2426 129 0.3537 0.3506 REMARK 3 12 1.9460 - 1.8904 0.45 1746 101 0.3548 0.3782 REMARK 3 13 1.8904 - 1.8406 0.37 1443 64 0.3414 0.4527 REMARK 3 14 1.8406 - 1.7957 0.29 1129 57 0.3732 0.3729 REMARK 3 15 1.7957 - 1.7549 0.21 840 32 0.3246 0.3870 REMARK 3 16 1.7549 - 1.7175 0.16 618 35 0.3249 0.3086 REMARK 3 17 1.7175 - 1.6832 0.10 413 20 0.3527 0.4151 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 43.150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 1823 REMARK 3 ANGLE : 0.525 2617 REMARK 3 CHIRALITY : 0.031 286 REMARK 3 PLANARITY : 0.003 193 REMARK 3 DIHEDRAL : 20.972 954 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 403 THROUGH 428 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.0578 19.5526 7.5987 REMARK 3 T TENSOR REMARK 3 T11: 0.4507 T22: 0.5664 REMARK 3 T33: 0.5520 T12: -0.0047 REMARK 3 T13: 0.0520 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 3.2108 L22: 3.2574 REMARK 3 L33: 2.9587 L12: 0.9946 REMARK 3 L13: 0.0155 L23: -0.7492 REMARK 3 S TENSOR REMARK 3 S11: -0.1292 S12: 0.4149 S13: 0.3961 REMARK 3 S21: -0.1678 S22: 0.2619 S23: -0.5582 REMARK 3 S31: -0.8508 S32: -0.1793 S33: -0.0880 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 429 THROUGH 461 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.4237 3.0849 8.1477 REMARK 3 T TENSOR REMARK 3 T11: 0.3705 T22: 0.2805 REMARK 3 T33: 0.3573 T12: 0.0380 REMARK 3 T13: -0.0402 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 3.0834 L22: 1.2802 REMARK 3 L33: 1.6668 L12: -0.4677 REMARK 3 L13: 0.5681 L23: 0.3097 REMARK 3 S TENSOR REMARK 3 S11: 0.1593 S12: 0.1887 S13: -0.5951 REMARK 3 S21: 0.0645 S22: -0.0030 S23: 0.1973 REMARK 3 S31: 0.1635 S32: -0.0451 S33: -0.1672 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 462 THROUGH 489 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.1221 18.7826 7.0685 REMARK 3 T TENSOR REMARK 3 T11: 0.3040 T22: 0.4855 REMARK 3 T33: 0.4385 T12: 0.0036 REMARK 3 T13: -0.0042 T23: 0.0710 REMARK 3 L TENSOR REMARK 3 L11: 1.1674 L22: 1.5040 REMARK 3 L33: 1.0548 L12: -0.0113 REMARK 3 L13: 0.2529 L23: -0.7127 REMARK 3 S TENSOR REMARK 3 S11: -0.1653 S12: -0.4470 S13: 0.0917 REMARK 3 S21: 0.3767 S22: 0.3149 S23: 0.4117 REMARK 3 S31: -0.2412 S32: -0.4260 S33: -0.1868 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 490 THROUGH 514 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.0083 27.1721 -11.8640 REMARK 3 T TENSOR REMARK 3 T11: 0.4987 T22: 0.4097 REMARK 3 T33: 0.3848 T12: -0.1176 REMARK 3 T13: -0.0874 T23: 0.0387 REMARK 3 L TENSOR REMARK 3 L11: 1.7850 L22: 2.8627 REMARK 3 L33: 1.9536 L12: -0.2211 REMARK 3 L13: 0.8176 L23: -0.7980 REMARK 3 S TENSOR REMARK 3 S11: -0.0145 S12: 0.1643 S13: 0.0874 REMARK 3 S21: -0.7708 S22: 0.1644 S23: 0.0133 REMARK 3 S31: 0.3133 S32: 0.0597 S33: -0.1513 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 1 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.9404 14.5036 -4.6372 REMARK 3 T TENSOR REMARK 3 T11: 0.4028 T22: 0.3874 REMARK 3 T33: 0.3757 T12: -0.0361 REMARK 3 T13: -0.1151 T23: 0.0222 REMARK 3 L TENSOR REMARK 3 L11: 3.2239 L22: 2.0725 REMARK 3 L33: 2.5639 L12: -1.7207 REMARK 3 L13: 2.3096 L23: -0.8841 REMARK 3 S TENSOR REMARK 3 S11: -0.0170 S12: 0.1887 S13: -0.5405 REMARK 3 S21: -0.4995 S22: 0.2086 S23: 0.6866 REMARK 3 S31: -0.2442 S32: 0.0734 S33: -0.1212 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 11 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.7207 16.6658 19.9393 REMARK 3 T TENSOR REMARK 3 T11: 0.4569 T22: 0.5792 REMARK 3 T33: 0.3187 T12: -0.0191 REMARK 3 T13: -0.0399 T23: -0.0344 REMARK 3 L TENSOR REMARK 3 L11: 1.5096 L22: 2.6163 REMARK 3 L33: 4.7262 L12: 0.5406 REMARK 3 L13: 1.9374 L23: -0.7538 REMARK 3 S TENSOR REMARK 3 S11: -0.0590 S12: -0.5547 S13: -0.0985 REMARK 3 S21: 0.5131 S22: 0.3307 S23: -0.1556 REMARK 3 S31: -0.2878 S32: -0.4086 S33: -0.2165 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 1 THROUGH 5 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.4490 19.8148 28.8663 REMARK 3 T TENSOR REMARK 3 T11: 0.6084 T22: 0.7254 REMARK 3 T33: 0.4611 T12: -0.0776 REMARK 3 T13: -0.1515 T23: -0.1508 REMARK 3 L TENSOR REMARK 3 L11: 1.5597 L22: 1.6297 REMARK 3 L33: 3.9261 L12: 0.4556 REMARK 3 L13: 0.2476 L23: -0.4443 REMARK 3 S TENSOR REMARK 3 S11: 0.4021 S12: -0.9982 S13: 0.5851 REMARK 3 S21: 0.5855 S22: -0.0162 S23: -0.1430 REMARK 3 S31: 0.0233 S32: -0.4831 S33: -0.2392 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 6 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.2489 16.1610 10.2235 REMARK 3 T TENSOR REMARK 3 T11: 0.4106 T22: 0.3578 REMARK 3 T33: 0.2889 T12: -0.0470 REMARK 3 T13: -0.0120 T23: -0.0353 REMARK 3 L TENSOR REMARK 3 L11: 2.5304 L22: 1.9810 REMARK 3 L33: 3.1752 L12: 0.1916 REMARK 3 L13: 1.8361 L23: 0.2191 REMARK 3 S TENSOR REMARK 3 S11: -0.0097 S12: -0.2181 S13: -0.1802 REMARK 3 S21: -0.1360 S22: 0.2849 S23: 0.0466 REMARK 3 S31: -0.1901 S32: -0.1680 S33: -0.3030 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 16 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.2363 10.4509 -8.9626 REMARK 3 T TENSOR REMARK 3 T11: 0.5330 T22: 0.5248 REMARK 3 T33: 0.5789 T12: -0.0575 REMARK 3 T13: -0.1310 T23: -0.0756 REMARK 3 L TENSOR REMARK 3 L11: 8.2296 L22: 5.9895 REMARK 3 L33: 3.8891 L12: 0.1760 REMARK 3 L13: 3.7806 L23: -0.3877 REMARK 3 S TENSOR REMARK 3 S11: -0.4689 S12: 1.0629 S13: -2.4117 REMARK 3 S21: -0.7484 S22: 0.7998 S23: 0.5409 REMARK 3 S31: -0.0520 S32: 0.2190 S33: -0.4332 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ML3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1000237125. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK DOUBLE CRYSTAL REMARK 200 SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48340 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.680 REMARK 200 RESOLUTION RANGE LOW (A) : 38.361 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 73.9 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 18.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.35800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 6ML2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 0.2 M SODIUM MALONATE, PH REMARK 280 5.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.37850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 370 REMARK 465 PRO A 371 REMARK 465 LEU A 372 REMARK 465 GLY A 373 REMARK 465 SER A 374 REMARK 465 LYS A 375 REMARK 465 SER A 376 REMARK 465 PHE A 377 REMARK 465 THR A 378 REMARK 465 CYS A 379 REMARK 465 ASP A 380 REMARK 465 GLN A 381 REMARK 465 CYS A 382 REMARK 465 GLY A 383 REMARK 465 LYS A 384 REMARK 465 TYR A 385 REMARK 465 PHE A 386 REMARK 465 SER A 387 REMARK 465 GLN A 388 REMARK 465 LYS A 389 REMARK 465 ARG A 390 REMARK 465 GLN A 391 REMARK 465 LEU A 392 REMARK 465 LYS A 393 REMARK 465 SER A 394 REMARK 465 HIS A 395 REMARK 465 TYR A 396 REMARK 465 ARG A 397 REMARK 465 VAL A 398 REMARK 465 HIS A 399 REMARK 465 THR A 400 REMARK 465 GLY A 401 REMARK 465 HIS A 402 REMARK 465 LYS A 515 REMARK 465 HIS A 516 REMARK 465 THR A 517 REMARK 465 ALA A 518 REMARK 465 ASP A 519 REMARK 465 TYR A 520 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 403 OG REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 407 SG REMARK 620 2 CYS A 410 SG 113.6 REMARK 620 3 HIS A 423 NE2 107.6 96.0 REMARK 620 4 HIS A 427 NE2 130.1 101.4 102.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 602 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 435 SG REMARK 620 2 CYS A 438 SG 113.2 REMARK 620 3 HIS A 451 NE2 107.0 107.6 REMARK 620 4 HIS A 455 NE2 112.7 118.3 95.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 603 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 463 SG REMARK 620 2 CYS A 466 SG 118.0 REMARK 620 3 HIS A 479 NE2 114.2 94.0 REMARK 620 4 HIS A 483 NE2 106.0 115.9 108.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 604 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 491 SG REMARK 620 2 CYS A 494 SG 110.8 REMARK 620 3 HIS A 507 NE2 104.8 97.8 REMARK 620 4 HIS A 511 NE2 120.6 107.6 112.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO E 102 DBREF 6ML3 A 375 519 UNP Q80X44 ZBT24_MOUSE 375 519 DBREF 6ML3 E 1 20 PDB 6ML3 6ML3 1 20 DBREF 6ML3 F 1 20 PDB 6ML3 6ML3 1 20 SEQADV 6ML3 GLY A 370 UNP Q80X44 EXPRESSION TAG SEQADV 6ML3 PRO A 371 UNP Q80X44 EXPRESSION TAG SEQADV 6ML3 LEU A 372 UNP Q80X44 EXPRESSION TAG SEQADV 6ML3 GLY A 373 UNP Q80X44 EXPRESSION TAG SEQADV 6ML3 SER A 374 UNP Q80X44 EXPRESSION TAG SEQADV 6ML3 TYR A 520 UNP Q80X44 EXPRESSION TAG SEQRES 1 A 151 GLY PRO LEU GLY SER LYS SER PHE THR CYS ASP GLN CYS SEQRES 2 A 151 GLY LYS TYR PHE SER GLN LYS ARG GLN LEU LYS SER HIS SEQRES 3 A 151 TYR ARG VAL HIS THR GLY HIS SER LEU PRO GLU CYS SER SEQRES 4 A 151 HIS CYS HIS ARG LYS PHE MET ASP VAL SER GLN LEU LYS SEQRES 5 A 151 LYS HIS LEU ARG THR HIS THR GLY GLU LYS PRO PHE THR SEQRES 6 A 151 CYS GLU ILE CYS GLY LYS SER PHE THR ALA LYS SER SER SEQRES 7 A 151 LEU GLN THR HIS ILE ARG ILE HIS ARG GLY GLU LYS PRO SEQRES 8 A 151 TYR SER CYS SER ILE CYS GLY LYS CYS PHE SER ASP SER SEQRES 9 A 151 SER ALA LYS ARG ARG HIS CYS ILE LEU HIS THR GLY LYS SEQRES 10 A 151 LYS PRO PHE SER CYS PRO GLU CYS GLY LEU GLN PHE ALA SEQRES 11 A 151 ARG LEU ASP ASN LEU LYS ALA HIS LEU LYS ILE HIS SER SEQRES 12 A 151 LYS GLU LYS HIS THR ALA ASP TYR SEQRES 1 E 20 DA DC DG DC DA DG DG DT DC DC DT DG DG SEQRES 2 E 20 DA DA DG DC DT DA DA SEQRES 1 F 20 DT DT DT DA DG DC DT DT DC DC DA DG DG SEQRES 2 F 20 DA DC DC DT DG DC DG HET ZN A 601 1 HET ZN A 602 1 HET ZN A 603 1 HET ZN A 604 1 HET ZN E 101 1 HET EDO E 102 4 HETNAM ZN ZINC ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 4 ZN 5(ZN 2+) FORMUL 9 EDO C2 H6 O2 FORMUL 10 HOH *76(H2 O) HELIX 1 AA1 ASP A 416 GLY A 429 1 14 HELIX 2 AA2 ALA A 444 GLY A 457 1 14 HELIX 3 AA3 ASP A 472 ILE A 481 1 10 HELIX 4 AA4 LEU A 482 GLY A 485 5 4 HELIX 5 AA5 ARG A 500 LYS A 513 1 14 SHEET 1 AA1 2 PHE A 433 THR A 434 0 SHEET 2 AA1 2 SER A 441 PHE A 442 -1 O PHE A 442 N PHE A 433 SHEET 1 AA2 2 TYR A 461 SER A 462 0 SHEET 2 AA2 2 CYS A 469 PHE A 470 -1 O PHE A 470 N TYR A 461 SHEET 1 AA3 2 PHE A 489 SER A 490 0 SHEET 2 AA3 2 GLN A 497 PHE A 498 -1 O PHE A 498 N PHE A 489 LINK SG CYS A 407 ZN ZN A 601 1555 1555 2.33 LINK SG CYS A 410 ZN ZN A 601 1555 1555 2.28 LINK NE2 HIS A 423 ZN ZN A 601 1555 1555 2.03 LINK NE2 HIS A 427 ZN ZN A 601 1555 1555 2.03 LINK SG CYS A 435 ZN ZN A 602 1555 1555 2.29 LINK SG CYS A 438 ZN ZN A 602 1555 1555 2.26 LINK NE2 HIS A 451 ZN ZN A 602 1555 1555 2.03 LINK NE2 HIS A 455 ZN ZN A 602 1555 1555 2.03 LINK SG CYS A 463 ZN ZN A 603 1555 1555 2.32 LINK SG CYS A 466 ZN ZN A 603 1555 1555 2.30 LINK NE2 HIS A 479 ZN ZN A 603 1555 1555 2.04 LINK NE2 HIS A 483 ZN ZN A 603 1555 1555 2.02 LINK SG CYS A 491 ZN ZN A 604 1555 1555 2.30 LINK SG CYS A 494 ZN ZN A 604 1555 1555 2.30 LINK NE2 HIS A 507 ZN ZN A 604 1555 1555 2.04 LINK NE2 HIS A 511 ZN ZN A 604 1555 1555 2.03 SITE 1 AC1 4 CYS A 407 CYS A 410 HIS A 423 HIS A 427 SITE 1 AC2 4 CYS A 435 CYS A 438 HIS A 451 HIS A 455 SITE 1 AC3 4 CYS A 463 CYS A 466 HIS A 479 HIS A 483 SITE 1 AC4 4 CYS A 491 CYS A 494 HIS A 507 HIS A 511 SITE 1 AC5 6 LYS A 440 HIS A 451 HIS A 455 HOH A 702 SITE 2 AC5 6 DT E 8 DC E 9 CRYST1 46.297 68.757 50.010 90.00 93.23 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021600 0.000000 0.001218 0.00000 SCALE2 0.000000 0.014544 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020028 0.00000