HEADER ISOMERASE 03-OCT-18 6MNV TITLE CRYSTAL STRUCTURE OF X. CITRI PHOSPHOGLUCOMUTASE IN COMPLEX WITH TITLE 2 CH2FG1P COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOMANNOMUTASE/PHOSPHOGLUCOMUTASE; COMPND 3 CHAIN: A; COMPND 4 EC: 5.4.2.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XANTHOMONAS CITRI; SOURCE 3 ORGANISM_TAXID: 346; SOURCE 4 GENE: XAVTCFBP7764_14885; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ENZYME, CARBOHYDRATE BIOSYNTHESIS, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.BEAMER,K.STIERS REVDAT 5 11-OCT-23 6MNV 1 HETSYN REVDAT 4 29-JUL-20 6MNV 1 REMARK SITE ATOM REVDAT 3 27-NOV-19 6MNV 1 REMARK REVDAT 2 14-AUG-19 6MNV 1 JRNL REVDAT 1 31-JUL-19 6MNV 0 JRNL AUTH J.S.ZHU,K.M.STIERS,E.SOLEIMANI,B.R.GROVES,L.J.BEAMER, JRNL AUTH 2 D.L.JAKEMAN JRNL TITL INHIBITORY EVALUATION OF ALPHA PMM/PGM FROMPSEUDOMONAS JRNL TITL 2 AERUGINOSA: CHEMICAL SYNTHESIS, ENZYME KINETICS, AND PROTEIN JRNL TITL 3 CRYSTALLOGRAPHIC STUDY. JRNL REF J.ORG.CHEM. V. 84 9627 2019 JRNL REFN ISSN 0022-3263 JRNL PMID 31264865 JRNL DOI 10.1021/ACS.JOC.9B01305 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.310 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 50079 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 4607 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.3100 - 5.1200 1.00 2994 168 0.1488 0.1546 REMARK 3 2 5.1200 - 4.0700 1.00 3004 156 0.1187 0.1443 REMARK 3 3 4.0700 - 3.5500 1.00 2989 172 0.1333 0.1567 REMARK 3 4 3.5500 - 3.2300 1.00 2987 190 0.1482 0.1751 REMARK 3 5 3.2300 - 3.0000 1.00 2998 152 0.1589 0.1814 REMARK 3 6 3.0000 - 2.8200 1.00 3025 146 0.1684 0.1887 REMARK 3 7 2.8200 - 2.6800 1.00 2990 155 0.1702 0.2224 REMARK 3 8 2.6800 - 2.5600 1.00 3006 130 0.1646 0.2279 REMARK 3 9 2.5600 - 2.4600 1.00 3050 136 0.1664 0.1737 REMARK 3 10 2.4600 - 2.3800 1.00 3040 134 0.1694 0.2368 REMARK 3 11 2.3800 - 2.3100 1.00 3003 143 0.1737 0.2681 REMARK 3 12 2.3100 - 2.2400 1.00 3045 149 0.1802 0.2298 REMARK 3 13 2.2400 - 2.1800 1.00 2921 139 0.1764 0.2490 REMARK 3 14 2.1800 - 2.1300 1.00 3086 172 0.1796 0.2124 REMARK 3 15 2.1300 - 2.0800 1.00 2955 166 0.1900 0.2460 REMARK 3 16 2.0800 - 2.0300 1.00 3016 183 0.2140 0.2455 REMARK 3 17 2.0300 - 1.9900 1.00 2983 136 0.2046 0.2387 REMARK 3 18 1.9900 - 1.9600 1.00 3036 142 0.2138 0.2335 REMARK 3 19 1.9600 - 1.9200 1.00 2992 172 0.2160 0.2654 REMARK 3 20 1.9200 - 1.8900 1.00 2957 166 0.2248 0.2610 REMARK 3 21 1.8900 - 1.8600 1.00 3073 145 0.2354 0.3047 REMARK 3 22 1.8600 - 1.8300 1.00 2933 173 0.2348 0.2651 REMARK 3 23 1.8300 - 1.8000 1.00 3014 139 0.2432 0.3001 REMARK 3 24 1.8000 - 1.7800 0.99 3029 115 0.2551 0.2961 REMARK 3 25 1.7800 - 1.7500 0.99 2993 131 0.2552 0.2108 REMARK 3 26 1.7500 - 1.7300 0.99 3032 152 0.2650 0.3070 REMARK 3 27 1.7300 - 1.7100 0.99 2933 178 0.2816 0.3018 REMARK 3 28 1.7100 - 1.6900 0.99 2954 157 0.3062 0.3308 REMARK 3 29 1.6900 - 1.6700 0.98 2965 153 0.3230 0.4252 REMARK 3 30 1.6700 - 1.6500 0.97 2884 157 0.3263 0.3590 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.228 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.726 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.81 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3622 REMARK 3 ANGLE : 0.864 4933 REMARK 3 CHIRALITY : 0.052 544 REMARK 3 PLANARITY : 0.006 655 REMARK 3 DIHEDRAL : 6.292 2933 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.0466 40.4056 21.4977 REMARK 3 T TENSOR REMARK 3 T11: 0.1986 T22: 0.2055 REMARK 3 T33: 0.1670 T12: 0.0158 REMARK 3 T13: 0.0084 T23: -0.0214 REMARK 3 L TENSOR REMARK 3 L11: 1.0099 L22: 1.2809 REMARK 3 L33: 2.5156 L12: -0.7555 REMARK 3 L13: -1.0967 L23: 1.2924 REMARK 3 S TENSOR REMARK 3 S11: -0.0697 S12: -0.0236 S13: -0.0477 REMARK 3 S21: -0.0297 S22: 0.0977 S23: -0.0510 REMARK 3 S31: 0.1587 S32: 0.2245 S33: -0.0086 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 182 THROUGH 386 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.4990 56.3939 27.8996 REMARK 3 T TENSOR REMARK 3 T11: 0.1397 T22: 0.1617 REMARK 3 T33: 0.1367 T12: -0.0071 REMARK 3 T13: 0.0262 T23: -0.0202 REMARK 3 L TENSOR REMARK 3 L11: 0.2739 L22: 0.6480 REMARK 3 L33: 0.8212 L12: -0.1906 REMARK 3 L13: -0.0254 L23: -0.3354 REMARK 3 S TENSOR REMARK 3 S11: -0.0194 S12: 0.0332 S13: -0.0117 REMARK 3 S21: -0.0151 S22: -0.0017 S23: -0.0133 REMARK 3 S31: 0.0043 S32: 0.0033 S33: 0.0091 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 387 THROUGH 448 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.6956 64.1880 11.1738 REMARK 3 T TENSOR REMARK 3 T11: 0.1854 T22: 0.1957 REMARK 3 T33: 0.1678 T12: 0.0021 REMARK 3 T13: 0.0132 T23: -0.0223 REMARK 3 L TENSOR REMARK 3 L11: 2.4623 L22: 1.5954 REMARK 3 L33: 2.7924 L12: 0.3399 REMARK 3 L13: -0.2196 L23: 0.1165 REMARK 3 S TENSOR REMARK 3 S11: -0.0086 S12: 0.2739 S13: -0.1611 REMARK 3 S21: -0.1475 S22: -0.0022 S23: -0.0767 REMARK 3 S31: -0.0258 S32: -0.0561 S33: -0.0083 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6MNV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1000237210. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00001 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50208 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 43.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.60 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 10.30 REMARK 200 R MERGE FOR SHELL (I) : 1.68300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5BMN REMARK 200 REMARK 200 REMARK: LONG HOLLOW TUBES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8K 22%, 0.2 M MGCL2, 0.1 M HEPES, REMARK 280 PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.82500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.58000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.23000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 85.58000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.82500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.23000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 14 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 216 CG CD OE1 OE2 REMARK 470 LYS A 374 CG CD CE NZ REMARK 470 GLU A 387 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 936 O HOH A 964 1.90 REMARK 500 O HOH A 715 O HOH A 939 1.94 REMARK 500 O HOH A 857 O HOH A 956 1.94 REMARK 500 OH TYR A 103 O HOH A 601 1.98 REMARK 500 NH2 ARG A 162 O HOH A 602 2.00 REMARK 500 OE1 GLU A 308 O HOH A 603 2.02 REMARK 500 OE1 GLU A 193 O HOH A 604 2.03 REMARK 500 OE2 GLU A 193 O HOH A 605 2.07 REMARK 500 O HOH A 756 O HOH A 996 2.10 REMARK 500 O HOH A 629 O HOH A 663 2.10 REMARK 500 OE1 GLN A 144 O HOH A 606 2.11 REMARK 500 O HOH A 895 O HOH A 1036 2.17 REMARK 500 OE2 GLU A 254 O HOH A 607 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 923 O HOH A 965 3645 1.86 REMARK 500 O HOH A 851 O HOH A 965 3645 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 45 -166.15 -100.63 REMARK 500 SER A 97 -89.06 57.02 REMARK 500 ARG A 110 -150.87 -106.27 REMARK 500 ARG A 110 -150.61 -106.58 REMARK 500 PHE A 240 37.06 37.06 REMARK 500 THR A 282 -42.64 -136.26 REMARK 500 ALA A 323 37.42 71.47 REMARK 500 PHE A 330 43.73 -94.97 REMARK 500 ASP A 400 87.05 -158.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 97 OG REMARK 620 2 ASP A 237 OD2 83.7 REMARK 620 3 ASP A 239 OD1 88.6 94.2 REMARK 620 4 ASP A 241 OD1 175.8 99.7 93.5 REMARK 620 5 HOH A 638 O 84.4 165.2 94.2 91.8 REMARK 620 6 HOH A 833 O 86.8 90.0 173.3 90.8 80.6 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6MLF RELATED DB: PDB REMARK 900 RELATED ID: 6MLH RELATED DB: PDB REMARK 900 RELATED ID: 6MLW RELATED DB: PDB DBREF1 6MNV A 1 448 UNP A0A2K2R2Z1_XANCI DBREF2 6MNV A A0A2K2R2Z1 1 448 SEQADV 6MNV MET A -19 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV GLY A -18 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV SER A -17 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV SER A -16 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV HIS A -15 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV HIS A -14 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV HIS A -13 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV HIS A -12 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV HIS A -11 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV HIS A -10 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV SER A -9 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV SER A -8 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV GLY A -7 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV LEU A -6 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV VAL A -5 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV PRO A -4 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV ARG A -3 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV GLY A -2 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV SER A -1 UNP A0A2K2R2Z EXPRESSION TAG SEQADV 6MNV HIS A 0 UNP A0A2K2R2Z EXPRESSION TAG SEQRES 1 A 468 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 468 LEU VAL PRO ARG GLY SER HIS MET THR LEU PRO ALA PHE SEQRES 3 A 468 LYS ALA TYR ASP ILE ARG GLY ARG VAL PRO ASP GLU LEU SEQRES 4 A 468 ASN GLU ASP LEU ALA ARG ARG ILE GLY VAL ALA LEU ALA SEQRES 5 A 468 ALA GLN LEU ASP GLN GLY PRO VAL VAL LEU GLY HIS ASP SEQRES 6 A 468 VAL ARG LEU ALA SER PRO ALA LEU GLN GLU ALA LEU SER SEQRES 7 A 468 ALA GLY LEU ARG ALA SER GLY ARG ASP VAL ILE ASP ILE SEQRES 8 A 468 GLY LEU CYS GLY THR GLU GLU VAL TYR PHE GLN THR ASP SEQRES 9 A 468 TYR LEU LYS ALA ALA GLY GLY VAL MET VAL THR ALA SER SEQRES 10 A 468 HIS ASN PRO MET ASP TYR ASN GLY MET LYS LEU VAL ARG SEQRES 11 A 468 GLU GLN ALA ARG PRO ILE SER SER ASP THR GLY LEU PHE SEQRES 12 A 468 ALA ILE ARG ASP THR VAL ALA ALA ASP THR ALA ALA PRO SEQRES 13 A 468 GLY GLU PRO THR ALA SER GLU GLN SER ARG THR ASP LYS SEQRES 14 A 468 THR ALA TYR LEU GLU HIS LEU LEU SER TYR VAL ASP ARG SEQRES 15 A 468 SER THR LEU LYS PRO LEU LYS LEU VAL VAL ASN ALA GLY SEQRES 16 A 468 ASN GLY GLY ALA GLY LEU ILE VAL ASP LEU LEU ALA PRO SEQRES 17 A 468 HIS LEU PRO PHE GLU PHE VAL ARG VAL PHE HIS GLU PRO SEQRES 18 A 468 ASP GLY ASN PHE PRO ASN GLY ILE PRO ASN PRO LEU LEU SEQRES 19 A 468 PRO GLU ASN ARG ASP ALA THR ALA LYS ALA VAL LYS ASP SEQRES 20 A 468 ASN GLY ALA ASP PHE GLY ILE ALA TRP ASP GLY ASP PHE SEQRES 21 A 468 ASP ARG CYS PHE PHE PHE ASP HIS THR GLY ARG PHE ILE SEQRES 22 A 468 GLU GLY TYR TYR LEU VAL GLY LEU LEU ALA GLN ALA ILE SEQRES 23 A 468 LEU ALA LYS GLN PRO GLY GLY LYS VAL VAL HIS ASP PRO SEQRES 24 A 468 ARG LEU THR TRP ASN THR VAL GLU GLN VAL GLU GLU ALA SEQRES 25 A 468 GLY GLY ILE PRO VAL LEU CYS LYS SER GLY HIS ALA PHE SEQRES 26 A 468 ILE LYS GLU LYS MET ARG SER GLU ASN ALA VAL TYR GLY SEQRES 27 A 468 GLY GLU MET SER ALA HIS HIS TYR PHE ARG GLU PHE ALA SEQRES 28 A 468 TYR ALA ASP SER GLY MET ILE PRO TRP LEU LEU ILE ALA SEQRES 29 A 468 GLU LEU VAL SER GLN SER GLY ARG SER LEU ALA ASP LEU SEQRES 30 A 468 VAL GLU ALA ARG MET GLN LYS PHE PRO CYS SER GLY GLU SEQRES 31 A 468 ILE ASN PHE LYS VAL ALA ASP ALA LYS ALA SER VAL ALA SEQRES 32 A 468 ARG VAL MET GLU HIS TYR ALA SER LEU SER PRO GLU LEU SEQRES 33 A 468 ASP TYR THR ASP GLY ILE SER ALA ASP PHE GLY GLN TRP SEQRES 34 A 468 ARG PHE ASN LEU ARG SER SER ASN THR GLU PRO LEU LEU SEQRES 35 A 468 ARG LEU ASN VAL GLU THR ARG GLY ASP ALA ALA LEU LEU SEQRES 36 A 468 GLU THR ARG THR GLN GLU ILE SER ASN LEU LEU ARG GLY HET JVS A 501 18 HET MG A 502 1 HET PGE A 503 10 HETNAM JVS 1-DEOXY-1-FLUORO-2-O-PHOSPHONO-ALPHA-D-GLUCO-HEPT-2- HETNAM 2 JVS ULOPYRANOSE HETNAM MG MAGNESIUM ION HETNAM PGE TRIETHYLENE GLYCOL HETSYN JVS 1-DEOXY-1-FLUORO-2-O-PHOSPHONO-ALPHA-D-GLUCO-HEPT-2- HETSYN 2 JVS ULOSE; 1-DEOXY-1-FLUORO-2-O-PHOSPHONO-D-GLUCO-HEPT-2- HETSYN 3 JVS ULOSE; 1-DEOXY-1-FLUORO-2-O-PHOSPHONO-GLUCO-HEPT-2- HETSYN 4 JVS ULOSE FORMUL 2 JVS C7 H14 F O9 P FORMUL 3 MG MG 2+ FORMUL 4 PGE C6 H14 O4 FORMUL 5 HOH *469(H2 O) HELIX 1 AA1 ASN A 20 LEU A 35 1 16 HELIX 2 AA2 ALA A 49 SER A 64 1 16 HELIX 3 AA3 GLY A 75 LEU A 86 1 12 HELIX 4 AA4 ARG A 110 ARG A 114 5 5 HELIX 5 AA5 SER A 117 THR A 120 5 4 HELIX 6 AA6 GLY A 121 ASP A 132 1 12 HELIX 7 AA7 LYS A 149 SER A 158 1 10 HELIX 8 AA8 TYR A 159 VAL A 160 5 2 HELIX 9 AA9 ASP A 161 LEU A 165 5 5 HELIX 10 AB1 GLY A 178 ALA A 187 1 10 HELIX 11 AB2 PRO A 188 LEU A 190 5 3 HELIX 12 AB3 LEU A 214 GLY A 229 1 16 HELIX 13 AB4 GLU A 254 GLN A 270 1 17 HELIX 14 AB5 THR A 282 ALA A 292 1 11 HELIX 15 AB6 GLY A 302 ASN A 314 1 13 HELIX 16 AB7 GLU A 329 ALA A 331 5 3 HELIX 17 AB8 MET A 337 GLY A 351 1 15 HELIX 18 AB9 SER A 353 PHE A 365 1 13 HELIX 19 AC1 ASP A 377 ALA A 390 1 14 HELIX 20 AC2 SER A 391 SER A 393 5 3 HELIX 21 AC3 ASP A 431 GLY A 448 1 18 SHEET 1 AA1 6 ILE A 11 ARG A 14 0 SHEET 2 AA1 6 TYR A 103 VAL A 109 -1 O MET A 106 N ILE A 11 SHEET 3 AA1 6 GLY A 90 VAL A 94 -1 N GLY A 91 O VAL A 109 SHEET 4 AA1 6 VAL A 40 HIS A 44 1 N GLY A 43 O VAL A 94 SHEET 5 AA1 6 VAL A 68 LEU A 73 1 O ILE A 69 N LEU A 42 SHEET 6 AA1 6 GLU A 143 SER A 145 1 O GLN A 144 N ASP A 70 SHEET 1 AA2 4 GLU A 193 VAL A 197 0 SHEET 2 AA2 4 LYS A 169 ASN A 173 1 N VAL A 172 O VAL A 197 SHEET 3 AA2 4 PHE A 232 TRP A 236 1 O ILE A 234 N ASN A 173 SHEET 4 AA2 4 CYS A 243 PHE A 246 -1 O PHE A 246 N GLY A 233 SHEET 1 AA3 4 ILE A 295 LEU A 298 0 SHEET 2 AA3 4 LYS A 274 HIS A 277 1 N VAL A 275 O VAL A 297 SHEET 3 AA3 4 TYR A 317 GLU A 320 1 O GLY A 319 N VAL A 276 SHEET 4 AA3 4 HIS A 324 PHE A 327 -1 O TYR A 326 N GLY A 318 SHEET 1 AA4 5 ILE A 371 PHE A 373 0 SHEET 2 AA4 5 LEU A 422 THR A 428 -1 O LEU A 422 N PHE A 373 SHEET 3 AA4 5 TRP A 409 SER A 415 -1 N ARG A 414 O ARG A 423 SHEET 4 AA4 5 ILE A 402 ASP A 405 -1 N ALA A 404 O PHE A 411 SHEET 5 AA4 5 GLU A 395 ASP A 397 -1 N GLU A 395 O ASP A 405 LINK OG SER A 97 MG MG A 502 1555 1555 2.26 LINK OD2 ASP A 237 MG MG A 502 1555 1555 1.94 LINK OD1 ASP A 239 MG MG A 502 1555 1555 2.06 LINK OD1 ASP A 241 MG MG A 502 1555 1555 2.09 LINK MG MG A 502 O HOH A 638 1555 1555 2.13 LINK MG MG A 502 O HOH A 833 1555 1555 2.10 CISPEP 1 VAL A 15 PRO A 16 0 7.71 CRYST1 43.650 54.460 171.160 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022910 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018362 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005842 0.00000