HEADER TOXIN 09-OCT-18 6MQF TITLE MYOTOXIN II FROM BOTHROPS MOOJENI COMPLEXED WITH ACETYLSALICYLIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: BASIC PHOSPHOLIPASE A2 HOMOLOG 2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SVPLA2 HOMOLOG,M-VI,MJTX-II,MYOTOXIN II SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOTHROPS MOOJENI; SOURCE 3 ORGANISM_COMMON: LANCE-HEADED VIPER; SOURCE 4 ORGANISM_TAXID: 98334; SOURCE 5 TISSUE: VENOM GLAND KEYWDS ASPIRIN, ACETYLSALICYLIC ACID, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR G.H.M.SALVADOR,M.R.M.FONTES REVDAT 2 11-OCT-23 6MQF 1 REMARK HETSYN REVDAT 1 20-MAR-19 6MQF 0 JRNL AUTH G.H.M.SALVADOR,F.F.CARDOSO,A.A.GOMES,W.L.G.CAVALCANTE, JRNL AUTH 2 M.GALLACCI,M.R.M.FONTES JRNL TITL SEARCH FOR EFFICIENT INHIBITORS OF MYOTOXIC ACTIVITY INDUCED JRNL TITL 2 BY OPHIDIAN PHOSPHOLIPASE A2-LIKE PROTEINS USING FUNCTIONAL, JRNL TITL 3 STRUCTURAL AND BIOINFORMATICS APPROACHES. JRNL REF SCI REP V. 9 510 2019 JRNL REFN ESSN 2045-2322 JRNL PMID 30679550 JRNL DOI 10.1038/S41598-018-36839-6 REMARK 2 REMARK 2 RESOLUTION. 1.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 3 NUMBER OF REFLECTIONS : 29545 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 1441 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 18.8853 - 3.6399 0.96 2928 147 0.1600 0.1848 REMARK 3 2 3.6399 - 2.8924 0.96 2889 145 0.1678 0.1919 REMARK 3 3 2.8924 - 2.5278 0.96 2877 156 0.1777 0.2178 REMARK 3 4 2.5278 - 2.2971 0.96 2873 144 0.1798 0.2454 REMARK 3 5 2.2971 - 2.1327 0.94 2827 139 0.1932 0.2278 REMARK 3 6 2.1327 - 2.0071 0.95 2806 155 0.1762 0.2577 REMARK 3 7 2.0071 - 1.9067 0.93 2762 141 0.2026 0.2527 REMARK 3 8 1.9067 - 1.8238 0.93 2749 150 0.1861 0.2256 REMARK 3 9 1.8238 - 1.7536 0.92 2759 135 0.2300 0.2743 REMARK 3 10 1.7536 - 1.6931 0.89 2634 129 0.2369 0.2892 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.240 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 1995 REMARK 3 ANGLE : 1.216 2683 REMARK 3 CHIRALITY : 0.065 268 REMARK 3 PLANARITY : 0.008 342 REMARK 3 DIHEDRAL : 16.946 1198 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 1:61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.826 -73.361 50.748 REMARK 3 T TENSOR REMARK 3 T11: 0.0821 T22: 0.1291 REMARK 3 T33: 0.1387 T12: 0.0041 REMARK 3 T13: -0.0187 T23: 0.0014 REMARK 3 L TENSOR REMARK 3 L11: 1.3382 L22: 0.9947 REMARK 3 L33: 1.5038 L12: 0.4393 REMARK 3 L13: -0.4695 L23: -0.3243 REMARK 3 S TENSOR REMARK 3 S11: -0.0685 S12: -0.0115 S13: -0.0276 REMARK 3 S21: 0.0254 S22: 0.0051 S23: -0.1512 REMARK 3 S31: -0.0221 S32: -0.0032 S33: 0.0520 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 67:79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.401 -65.914 36.597 REMARK 3 T TENSOR REMARK 3 T11: 0.1749 T22: 0.2222 REMARK 3 T33: 0.2103 T12: -0.0158 REMARK 3 T13: -0.0087 T23: 0.0460 REMARK 3 L TENSOR REMARK 3 L11: 1.0535 L22: 0.4350 REMARK 3 L33: 0.5429 L12: -0.0712 REMARK 3 L13: -0.5517 L23: 0.2742 REMARK 3 S TENSOR REMARK 3 S11: -0.1208 S12: 0.0283 S13: -0.1114 REMARK 3 S21: -0.1592 S22: -0.0688 S23: -0.3450 REMARK 3 S31: -0.2370 S32: 0.3088 S33: 0.1178 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 80:122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.456 -76.421 50.260 REMARK 3 T TENSOR REMARK 3 T11: 0.0784 T22: 0.1415 REMARK 3 T33: 0.1448 T12: 0.0070 REMARK 3 T13: 0.0039 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 0.7333 L22: 0.7673 REMARK 3 L33: 1.2806 L12: 0.6665 REMARK 3 L13: -0.1923 L23: 0.0745 REMARK 3 S TENSOR REMARK 3 S11: -0.1568 S12: 0.1227 S13: -0.0550 REMARK 3 S21: -0.0156 S22: 0.0514 S23: -0.0154 REMARK 3 S31: 0.1154 S32: -0.1679 S33: 0.0576 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN B AND RESID 1:53 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.985 -73.346 74.965 REMARK 3 T TENSOR REMARK 3 T11: 0.1871 T22: 0.1346 REMARK 3 T33: 0.1104 T12: -0.0130 REMARK 3 T13: -0.0036 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 1.1957 L22: 2.0195 REMARK 3 L33: 2.2273 L12: -0.0863 REMARK 3 L13: -0.0895 L23: -0.7475 REMARK 3 S TENSOR REMARK 3 S11: -0.0355 S12: -0.0489 S13: -0.0594 REMARK 3 S21: 0.3130 S22: -0.0501 S23: -0.0409 REMARK 3 S31: -0.3809 S32: -0.0041 S33: 0.0436 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN B AND RESID 57:79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.492 -86.667 83.281 REMARK 3 T TENSOR REMARK 3 T11: 0.3053 T22: 0.1476 REMARK 3 T33: 0.2155 T12: 0.0563 REMARK 3 T13: 0.0510 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 1.3267 L22: 0.4225 REMARK 3 L33: 4.1997 L12: -0.1513 REMARK 3 L13: -1.8244 L23: 0.8449 REMARK 3 S TENSOR REMARK 3 S11: -0.2922 S12: 0.0654 S13: -0.0967 REMARK 3 S21: 0.3319 S22: -0.0214 S23: -0.0592 REMARK 3 S31: 0.5589 S32: -0.0080 S33: 0.1122 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN B AND RESID 80:107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.637 -73.369 80.802 REMARK 3 T TENSOR REMARK 3 T11: 0.3452 T22: 0.1514 REMARK 3 T33: 0.1258 T12: 0.0002 REMARK 3 T13: 0.0173 T23: -0.0159 REMARK 3 L TENSOR REMARK 3 L11: 1.2651 L22: 2.4257 REMARK 3 L33: 1.9404 L12: -0.3003 REMARK 3 L13: 0.0688 L23: -0.1410 REMARK 3 S TENSOR REMARK 3 S11: -0.0668 S12: -0.0630 S13: 0.1290 REMARK 3 S21: 0.7395 S22: -0.0544 S23: -0.0730 REMARK 3 S31: -0.4441 S32: -0.0068 S33: -0.0115 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN B AND RESID 108:122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.519 -66.215 65.756 REMARK 3 T TENSOR REMARK 3 T11: 0.2488 T22: 0.1860 REMARK 3 T33: 0.1740 T12: -0.0677 REMARK 3 T13: -0.0378 T23: 0.0324 REMARK 3 L TENSOR REMARK 3 L11: 2.0127 L22: 2.1821 REMARK 3 L33: 2.4433 L12: -0.5685 REMARK 3 L13: 0.0070 L23: 0.1439 REMARK 3 S TENSOR REMARK 3 S11: 0.0598 S12: -0.0959 S13: -0.0279 REMARK 3 S21: 0.3208 S22: -0.1719 S23: -0.1565 REMARK 3 S31: -0.6120 S32: 0.1288 S33: 0.1523 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6MQF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1000237403. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.459 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.32 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29583 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.690 REMARK 200 RESOLUTION RANGE LOW (A) : 55.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.38200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.0 REMARK 200 STARTING MODEL: 6B80 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000, ISOPROPANOL, SODIUM CITRATE, REMARK 280 PH 4.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.77000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 7 CD CE NZ REMARK 470 LYS A 69 CD CE NZ REMARK 470 LYS A 128 CE NZ REMARK 470 LYS B 57 CG CD CE NZ REMARK 470 LYS B 78 CE NZ REMARK 470 LYS B 115 CE NZ REMARK 470 LYS B 128 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 379 O HOH B 387 1.97 REMARK 500 O TYR B 73 O HOH B 301 2.02 REMARK 500 O HOH A 432 O HOH A 470 2.02 REMARK 500 O HOH A 424 O HOH A 481 2.05 REMARK 500 O HOH A 487 O HOH A 489 2.05 REMARK 500 O HOH B 382 O HOH B 387 2.06 REMARK 500 OE2 GLU B 4 O HOH B 301 2.09 REMARK 500 O HOH A 418 O HOH A 439 2.11 REMARK 500 O HOH A 426 O HOH A 435 2.12 REMARK 500 O HOH A 492 O HOH B 419 2.14 REMARK 500 O HOH A 379 O HOH A 409 2.16 REMARK 500 N VAL A 31 C9 AIN A 202 2.16 REMARK 500 O HOH B 416 O HOH B 421 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 423 O HOH A 439 2657 2.02 REMARK 500 O HOH A 405 O HOH A 434 2657 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 79 -120.09 49.18 REMARK 500 ASN A 87 -147.24 48.51 REMARK 500 ASP B 79 -113.23 53.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 492 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A 493 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH B 419 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH B 420 DISTANCE = 6.81 ANGSTROMS REMARK 525 HOH B 421 DISTANCE = 7.28 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AIN A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AIN B 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6MQD RELATED DB: PDB REMARK 900 SAME PROTEIN COMPLEXED WITH ROSMARINIC ACID DBREF 6MQF A 1 133 UNP Q9I834 PA2H2_BOTMO 1 122 DBREF 6MQF B 1 133 UNP Q9I834 PA2H2_BOTMO 1 122 SEQRES 1 A 122 SER LEU PHE GLU LEU GLY LYS MET ILE LEU GLN GLU THR SEQRES 2 A 122 GLY LYS ASN PRO ALA LYS SER TYR GLY VAL TYR GLY CYS SEQRES 3 A 122 ASN CYS GLY VAL GLY GLY ARG GLY LYS PRO LYS ASP ALA SEQRES 4 A 122 THR ASP ARG CYS CYS TYR VAL HIS LYS CYS CYS TYR LYS SEQRES 5 A 122 LYS LEU THR GLY CYS ASP PRO LYS LYS ASP ARG TYR SER SEQRES 6 A 122 TYR SER TRP LYS ASP LYS THR ILE VAL CYS GLY GLU ASN SEQRES 7 A 122 ASN SER CYS LEU LYS GLU LEU CYS GLU CYS ASP LYS ALA SEQRES 8 A 122 VAL ALA ILE CYS LEU ARG GLU ASN LEU ASP THR TYR ASN SEQRES 9 A 122 LYS LYS TYR ARG TYR ASN TYR LEU LYS PRO PHE CYS LYS SEQRES 10 A 122 LYS ALA ASP PRO CYS SEQRES 1 B 122 SER LEU PHE GLU LEU GLY LYS MET ILE LEU GLN GLU THR SEQRES 2 B 122 GLY LYS ASN PRO ALA LYS SER TYR GLY VAL TYR GLY CYS SEQRES 3 B 122 ASN CYS GLY VAL GLY GLY ARG GLY LYS PRO LYS ASP ALA SEQRES 4 B 122 THR ASP ARG CYS CYS TYR VAL HIS LYS CYS CYS TYR LYS SEQRES 5 B 122 LYS LEU THR GLY CYS ASP PRO LYS LYS ASP ARG TYR SER SEQRES 6 B 122 TYR SER TRP LYS ASP LYS THR ILE VAL CYS GLY GLU ASN SEQRES 7 B 122 ASN SER CYS LEU LYS GLU LEU CYS GLU CYS ASP LYS ALA SEQRES 8 B 122 VAL ALA ILE CYS LEU ARG GLU ASN LEU ASP THR TYR ASN SEQRES 9 B 122 LYS LYS TYR ARG TYR ASN TYR LEU LYS PRO PHE CYS LYS SEQRES 10 B 122 LYS ALA ASP PRO CYS HET DMS A 201 4 HET AIN A 202 13 HET DMS B 201 4 HET DMS B 202 4 HET AIN B 203 13 HETNAM DMS DIMETHYL SULFOXIDE HETNAM AIN 2-(ACETYLOXY)BENZOIC ACID HETSYN AIN ACETYLSALICYLIC ACID; ASPIRIN FORMUL 3 DMS 3(C2 H6 O S) FORMUL 4 AIN 2(C9 H8 O4) FORMUL 8 HOH *314(H2 O) HELIX 1 AA1 SER A 1 GLY A 15 1 14 HELIX 2 AA2 ASN A 17 GLY A 23 1 7 HELIX 3 AA3 ASP A 39 LYS A 57 1 16 HELIX 4 AA4 ASN A 88 ASN A 109 1 21 HELIX 5 AA5 LEU A 110 TYR A 113 5 4 HELIX 6 AA6 ASN A 114 ARG A 118 5 5 HELIX 7 AA7 LEU A 122 CYS A 127 5 5 HELIX 8 AA8 LEU B 2 GLY B 15 1 13 HELIX 9 AA9 ASN B 17 GLY B 23 1 7 HELIX 10 AB1 ASP B 39 LEU B 58 1 17 HELIX 11 AB2 ASN B 88 ASN B 109 1 21 HELIX 12 AB3 LEU B 110 TYR B 113 5 4 HELIX 13 AB4 ASN B 114 ARG B 118 5 5 HELIX 14 AB5 LEU B 122 CYS B 127 5 5 SHEET 1 AA1 2 TYR A 75 LYS A 78 0 SHEET 2 AA1 2 THR A 81 CYS A 84 -1 O VAL A 83 N SER A 76 SHEET 1 AA2 2 SER B 74 LYS B 78 0 SHEET 2 AA2 2 THR B 81 GLY B 85 -1 O VAL B 83 N SER B 76 SSBOND 1 CYS A 27 CYS A 127 1555 1555 2.10 SSBOND 2 CYS A 29 CYS A 45 1555 1555 2.06 SSBOND 3 CYS A 44 CYS A 105 1555 1555 2.04 SSBOND 4 CYS A 50 CYS A 133 1555 1555 2.07 SSBOND 5 CYS A 51 CYS A 98 1555 1555 2.00 SSBOND 6 CYS A 61 CYS A 90 1555 1555 2.05 SSBOND 7 CYS A 84 CYS A 96 1555 1555 2.04 SSBOND 8 CYS B 27 CYS B 127 1555 1555 2.07 SSBOND 9 CYS B 29 CYS B 45 1555 1555 2.05 SSBOND 10 CYS B 44 CYS B 105 1555 1555 2.06 SSBOND 11 CYS B 50 CYS B 133 1555 1555 2.05 SSBOND 12 CYS B 51 CYS B 98 1555 1555 2.05 SSBOND 13 CYS B 61 CYS B 90 1555 1555 2.06 SSBOND 14 CYS B 84 CYS B 96 1555 1555 2.03 SITE 1 AC1 7 TYR A 22 CYS A 29 GLY A 30 VAL A 102 SITE 2 AC1 7 AIN A 202 HOH A 348 DMS B 202 SITE 1 AC2 15 GLY A 23 GLY A 30 VAL A 31 LYS A 49 SITE 2 AC2 15 TYR A 52 DMS A 201 HOH A 317 HOH A 335 SITE 3 AC2 15 HOH A 380 HOH A 403 HOH A 412 PRO B 125 SITE 4 AC2 15 DMS B 202 HOH B 307 HOH B 345 SITE 1 AC3 6 TYR B 22 CYS B 29 GLY B 30 VAL B 102 SITE 2 AC3 6 AIN B 203 HOH B 343 SITE 1 AC4 6 LEU A 5 DMS A 201 AIN A 202 HOH A 444 SITE 2 AC4 6 PHE B 126 HOH B 307 SITE 1 AC5 11 PRO A 125 LEU B 2 GLY B 30 VAL B 31 SITE 2 AC5 11 LYS B 49 LYS B 69 DMS B 201 HOH B 315 SITE 3 AC5 11 HOH B 337 HOH B 349 HOH B 350 CRYST1 39.553 65.540 55.121 90.00 92.72 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025283 0.000000 0.001200 0.00000 SCALE2 0.000000 0.015258 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018162 0.00000