HEADER HYDROLASE 12-OCT-18 6MRF TITLE CRYSTAL STRUCTURE OF A METHIONINE AMINOPEPTIDASE METAP FROM TITLE 2 ACINETOBACTER BAUMANNII COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHIONINE AMINOPEPTIDASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: METAP,PEPTIDASE M; COMPND 5 EC: 3.4.11.18; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII; SOURCE 3 ORGANISM_TAXID: 470; SOURCE 4 ATCC: ATCC 17978 / NCDC KC 755; SOURCE 5 GENE: MAP_1, MAP, MAP1, MAP_2, A7M79_08180, A7M90_04815, SOURCE 6 A7N09_12540, ABUW_1234, APD06_11055, AZE33_14285, B4R90_02870, SOURCE 7 B9X91_03550, B9X95_11705, BGC29_02575, BWP00_06705, C2U32_08280, SOURCE 8 C7G90_05480, CBE85_00465, CBI29_02666, CEJ63_06330, CHQ89_03925, SOURCE 9 CPI82_15740, DCD76_03690, DCD77_06610, IX87_07995, LV38_03303, SOURCE 10 NCTC13421_01191; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NIAID, STRUCTURAL GENOMICS, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 2 INFECTIOUS DISEASE, METALLOPROTEASE, METAL DEPENDENT PROTEASE, KEYWDS 3 MANGANESE, NICKEL, METHIONINE, CYTOPLASM, SEATTLE STRUCTURAL KEYWDS 4 GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 11-OCT-23 6MRF 1 REMARK REVDAT 1 31-OCT-18 6MRF 0 JRNL AUTH T.E.EDWARDS,S.J.MAYCLIN,D.D.LORIMER,P.S.HORANYI, JRNL AUTH 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE JRNL TITL CRYSTAL STRUCTURE OF A METHIONINE AMINOPEPTIDASE METAP FROM JRNL TITL 2 ACINETOBACTER BAUMANNII JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 29468 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.690 REMARK 3 FREE R VALUE TEST SET COUNT : 1381 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.7411 - 3.5542 1.00 3023 99 0.1593 0.2155 REMARK 3 2 3.5542 - 2.8212 1.00 2878 123 0.1617 0.1980 REMARK 3 3 2.8212 - 2.4646 1.00 2804 154 0.1655 0.2177 REMARK 3 4 2.4646 - 2.2393 1.00 2794 151 0.1627 0.2197 REMARK 3 5 2.2393 - 2.0788 1.00 2802 123 0.1584 0.2039 REMARK 3 6 2.0788 - 1.9562 1.00 2796 128 0.1681 0.2009 REMARK 3 7 1.9562 - 1.8582 1.00 2763 154 0.1786 0.2450 REMARK 3 8 1.8582 - 1.7773 1.00 2757 153 0.2001 0.2221 REMARK 3 9 1.7773 - 1.7089 1.00 2712 145 0.2168 0.2528 REMARK 3 10 1.7089 - 1.6500 0.99 2758 151 0.2478 0.2780 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5919 18.6675 2.8075 REMARK 3 T TENSOR REMARK 3 T11: 0.5570 T22: 0.2859 REMARK 3 T33: 0.2769 T12: 0.0380 REMARK 3 T13: 0.1442 T23: 0.0454 REMARK 3 L TENSOR REMARK 3 L11: 2.1576 L22: 5.4495 REMARK 3 L33: 2.6809 L12: -1.4137 REMARK 3 L13: -0.9683 L23: -0.1534 REMARK 3 S TENSOR REMARK 3 S11: 0.5118 S12: 0.0634 S13: 0.4948 REMARK 3 S21: -0.5174 S22: -0.3138 S23: -0.5667 REMARK 3 S31: -1.1513 S32: 0.0769 S33: -0.1620 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.9556 -1.2190 -3.1558 REMARK 3 T TENSOR REMARK 3 T11: 0.2742 T22: 0.2146 REMARK 3 T33: 0.1214 T12: 0.0308 REMARK 3 T13: 0.0381 T23: -0.0303 REMARK 3 L TENSOR REMARK 3 L11: 1.0358 L22: 6.2903 REMARK 3 L33: 4.6382 L12: -0.3280 REMARK 3 L13: -0.1724 L23: -2.4938 REMARK 3 S TENSOR REMARK 3 S11: -0.0298 S12: 0.2180 S13: -0.0755 REMARK 3 S21: -0.7332 S22: -0.0292 S23: -0.2086 REMARK 3 S31: 0.3293 S32: -0.0694 S33: 0.0707 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 49 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.5541 9.0260 -3.7562 REMARK 3 T TENSOR REMARK 3 T11: 0.6385 T22: 0.3644 REMARK 3 T33: 0.3458 T12: 0.0011 REMARK 3 T13: 0.1451 T23: -0.0073 REMARK 3 L TENSOR REMARK 3 L11: 3.0101 L22: 2.0160 REMARK 3 L33: 2.0018 L12: 3.3676 REMARK 3 L13: -1.6458 L23: 0.3333 REMARK 3 S TENSOR REMARK 3 S11: 0.0268 S12: 0.1720 S13: 0.2325 REMARK 3 S21: -0.1825 S22: 0.0455 S23: -1.3581 REMARK 3 S31: -0.8066 S32: 0.3664 S33: -0.0149 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 72 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.3642 -6.4987 7.2069 REMARK 3 T TENSOR REMARK 3 T11: 0.2538 T22: 0.1492 REMARK 3 T33: 0.1678 T12: 0.0677 REMARK 3 T13: 0.0431 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 3.4351 L22: 1.9834 REMARK 3 L33: 5.4302 L12: -0.2610 REMARK 3 L13: -1.2040 L23: 0.0711 REMARK 3 S TENSOR REMARK 3 S11: -0.1607 S12: -0.0551 S13: -0.2064 REMARK 3 S21: -0.1410 S22: -0.0189 S23: -0.2457 REMARK 3 S31: 0.5172 S32: 0.4506 S33: 0.1631 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 96 THROUGH 123 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.3045 4.9638 6.6130 REMARK 3 T TENSOR REMARK 3 T11: 0.1830 T22: 0.1400 REMARK 3 T33: 0.1263 T12: 0.0188 REMARK 3 T13: 0.0231 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 2.5743 L22: 6.8662 REMARK 3 L33: 5.0127 L12: 1.2081 REMARK 3 L13: -2.0675 L23: -2.3185 REMARK 3 S TENSOR REMARK 3 S11: 0.1228 S12: 0.1728 S13: 0.2536 REMARK 3 S21: -0.3264 S22: -0.0186 S23: -0.2322 REMARK 3 S31: -0.3371 S32: 0.0822 S33: -0.0699 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 124 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.9360 4.2035 20.7537 REMARK 3 T TENSOR REMARK 3 T11: 0.2010 T22: 0.1963 REMARK 3 T33: 0.1488 T12: 0.0067 REMARK 3 T13: 0.0215 T23: -0.0132 REMARK 3 L TENSOR REMARK 3 L11: 1.1932 L22: 2.6204 REMARK 3 L33: 1.0194 L12: 1.4515 REMARK 3 L13: 0.1661 L23: -0.7513 REMARK 3 S TENSOR REMARK 3 S11: 0.0549 S12: -0.0741 S13: 0.0449 REMARK 3 S21: 0.2348 S22: -0.0792 S23: 0.0730 REMARK 3 S31: 0.0379 S32: -0.0508 S33: 0.0386 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 144 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9339 15.2583 26.4186 REMARK 3 T TENSOR REMARK 3 T11: 0.2871 T22: 0.2264 REMARK 3 T33: 0.2219 T12: 0.0049 REMARK 3 T13: -0.0392 T23: -0.0534 REMARK 3 L TENSOR REMARK 3 L11: 1.4351 L22: 2.2857 REMARK 3 L33: 2.3883 L12: -0.4426 REMARK 3 L13: 0.4381 L23: -2.3034 REMARK 3 S TENSOR REMARK 3 S11: -0.0175 S12: -0.2529 S13: 0.2317 REMARK 3 S21: 0.8668 S22: -0.0451 S23: -0.3232 REMARK 3 S31: -0.3600 S32: 0.2062 S33: 0.0229 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 164 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.3053 11.1034 22.3493 REMARK 3 T TENSOR REMARK 3 T11: 0.2791 T22: 0.3820 REMARK 3 T33: 0.3935 T12: -0.0451 REMARK 3 T13: -0.0873 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 3.4587 L22: 5.7419 REMARK 3 L33: 1.0448 L12: -0.4119 REMARK 3 L13: 0.8234 L23: 0.4973 REMARK 3 S TENSOR REMARK 3 S11: -0.1431 S12: -0.0300 S13: 0.5590 REMARK 3 S21: 0.1796 S22: 0.0082 S23: -0.9480 REMARK 3 S31: -0.2556 S32: 0.5133 S33: 0.0826 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 198 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.8074 10.1372 19.5184 REMARK 3 T TENSOR REMARK 3 T11: 0.1474 T22: 0.2807 REMARK 3 T33: 0.2962 T12: -0.0121 REMARK 3 T13: -0.0002 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.8977 L22: 1.1438 REMARK 3 L33: 2.1467 L12: -0.3721 REMARK 3 L13: 0.0975 L23: 0.3852 REMARK 3 S TENSOR REMARK 3 S11: 0.1129 S12: -0.0465 S13: 0.3028 REMARK 3 S21: 0.0266 S22: -0.1639 S23: -0.6050 REMARK 3 S31: 0.0092 S32: 0.5507 S33: 0.0420 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 221 THROUGH 234 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4171 -5.4508 15.7568 REMARK 3 T TENSOR REMARK 3 T11: 0.3011 T22: 0.3606 REMARK 3 T33: 0.2736 T12: 0.1393 REMARK 3 T13: 0.0083 T23: -0.0204 REMARK 3 L TENSOR REMARK 3 L11: 6.1311 L22: 4.7446 REMARK 3 L33: 5.6623 L12: 1.4699 REMARK 3 L13: -1.7462 L23: -0.7201 REMARK 3 S TENSOR REMARK 3 S11: -0.2101 S12: -0.0993 S13: -0.0495 REMARK 3 S21: -0.2404 S22: 0.0996 S23: -0.7698 REMARK 3 S31: 0.6875 S32: 1.0097 S33: 0.1520 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 235 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.4181 14.5144 12.6013 REMARK 3 T TENSOR REMARK 3 T11: 0.1976 T22: 0.2046 REMARK 3 T33: 0.2126 T12: -0.0089 REMARK 3 T13: 0.0331 T23: -0.0129 REMARK 3 L TENSOR REMARK 3 L11: 0.8525 L22: 3.1050 REMARK 3 L33: 2.0247 L12: -0.9406 REMARK 3 L13: -0.2031 L23: 1.6714 REMARK 3 S TENSOR REMARK 3 S11: 0.1275 S12: 0.0769 S13: 0.0478 REMARK 3 S21: -0.0687 S22: -0.2301 S23: 0.1704 REMARK 3 S31: -0.1680 S32: -0.1593 S33: 0.1539 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6MRF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1000237441. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29484 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 44.725 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.676 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.73 REMARK 200 R MERGE FOR SHELL (I) : 0.59600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.830 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.2 REMARK 200 STARTING MODEL: 3MX6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: ACBAB.00039.A.B6.PW38090 AT 26.5 MG/ML REMARK 280 WITH 5 MM METHIONINE AND 5 MM MGCL2 AGAINST JCSG+ SCREEN REMARK 280 CONDITION B9: 0.1 M SODIUM CITRATE PH 5.0, 20% PEG 6,000; CRYO- REMARK 280 PROTECTANT 20% ETHYLENE GLYCOL, UNIQUE PUCK ID JHT7-2, CRYSTAL REMARK 280 TRACKING ID 286134B9, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.38500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.13500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.84500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.13500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.38500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 26.84500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 GLY A 60 REMARK 465 GLY A 61 REMARK 465 ALA A 62 REMARK 465 PRO A 63 REMARK 465 GLY A 64 REMARK 465 ARG A 65 REMARK 465 PRO A 66 REMARK 465 ALA A 67 REMARK 465 VAL A 180 REMARK 465 PHE A 181 REMARK 465 HIS A 182 REMARK 465 ASP A 183 REMARK 465 GLU A 184 REMARK 465 PRO A 185 REMARK 465 ARG A 262 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 GLU A 9 CG CD OE1 OE2 REMARK 470 PHE A 68 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 69 CG CD OE1 NE2 REMARK 470 GLU A 171 CG CD OE1 OE2 REMARK 470 GLN A 186 CG CD OE1 NE2 REMARK 470 VAL A 187 CG1 CG2 REMARK 470 GLN A 192 CG CD OE1 NE2 REMARK 470 LYS A 224 CG CD CE NZ REMARK 470 LYS A 246 CG CD CE NZ REMARK 470 GLU A 257 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 403 O HOH A 489 3555 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 77 -112.97 60.09 REMARK 500 GLU A 208 60.44 -152.98 REMARK 500 TRP A 225 -55.10 -143.76 REMARK 500 LEU A 260 34.87 -95.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 77 O REMARK 620 2 VAL A 79 O 100.4 REMARK 620 3 SER A 235 O 90.4 132.0 REMARK 620 4 HOH A 428 O 124.5 111.9 98.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: ACBAB.00039.A RELATED DB: TARGETTRACK DBREF 6MRF A 2 262 UNP V5VCW7 V5VCW7_ACIBA 12 272 SEQADV 6MRF MET A -7 UNP V5VCW7 EXPRESSION TAG SEQADV 6MRF ALA A -6 UNP V5VCW7 EXPRESSION TAG SEQADV 6MRF HIS A -5 UNP V5VCW7 EXPRESSION TAG SEQADV 6MRF HIS A -4 UNP V5VCW7 EXPRESSION TAG SEQADV 6MRF HIS A -3 UNP V5VCW7 EXPRESSION TAG SEQADV 6MRF HIS A -2 UNP V5VCW7 EXPRESSION TAG SEQADV 6MRF HIS A -1 UNP V5VCW7 EXPRESSION TAG SEQADV 6MRF HIS A 0 UNP V5VCW7 EXPRESSION TAG SEQADV 6MRF MET A 1 UNP V5VCW7 EXPRESSION TAG SEQRES 1 A 270 MET ALA HIS HIS HIS HIS HIS HIS MET ILE LYS THR PRO SEQRES 2 A 270 ASP GLU ILE GLU LYS MET ARG ILE ALA GLY ARG LEU ALA SEQRES 3 A 270 ALA GLU VAL LEU ASP MET ILE LYS PRO HIS ILE LYS ALA SEQRES 4 A 270 GLY VAL SER THR LEU GLU LEU ASP THR ILE CYS ARG ASN SEQRES 5 A 270 HIS ILE GLU ASN VAL GLN HIS ALA ILE PRO ALA CYS VAL SEQRES 6 A 270 GLY TYR GLY GLY ALA PRO GLY ARG PRO ALA PHE GLN HIS SEQRES 7 A 270 SER ILE CYS THR SER VAL ASN HIS VAL VAL CYS HIS GLY SEQRES 8 A 270 ILE PRO SER GLU ASN LYS ILE LEU LYS ASN GLY ASP ILE SEQRES 9 A 270 LEU ASN ILE ASP VAL THR VAL ILE LYS ASP GLY TYR HIS SEQRES 10 A 270 GLY ASP THR ASN MET MET TYR ILE VAL GLY GLY GLU THR SEQRES 11 A 270 SER ILE LEU ALA ASN ARG LEU CYS LYS VAL ALA GLN GLU SEQRES 12 A 270 ALA MET TYR ARG GLY MET ALA THR VAL ARG ASP GLY SER SEQRES 13 A 270 TYR LEU GLY ASP ILE GLY HIS ALA ILE GLN LYS TYR VAL SEQRES 14 A 270 GLU SER GLU ARG PHE SER VAL VAL ARG GLU TYR CYS GLY SEQRES 15 A 270 HIS GLY ILE GLY THR VAL PHE HIS ASP GLU PRO GLN VAL SEQRES 16 A 270 LEU HIS TYR GLY GLN ALA GLY THR GLY MET ARG LEU GLU SEQRES 17 A 270 ALA GLY MET THR PHE THR ILE GLU PRO MET VAL ASN ALA SEQRES 18 A 270 GLY VAL TRP GLN THR LYS LEU LEU GLY ASP LYS TRP THR SEQRES 19 A 270 VAL VAL THR LYS ASP HIS LYS LEU SER ALA GLN TYR GLU SEQRES 20 A 270 HIS THR ILE LEU VAL THR LYS THR GLY ILE GLU VAL LEU SEQRES 21 A 270 THR ALA ARG PRO GLU GLU ASP LEU SER ARG HET EDO A 301 4 HET EDO A 302 4 HET NA A 303 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM NA SODIUM ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 2(C2 H6 O2) FORMUL 4 NA NA 1+ FORMUL 5 HOH *180(H2 O) HELIX 1 AA1 THR A 4 ILE A 25 1 22 HELIX 2 AA2 LYS A 26 ILE A 29 5 4 HELIX 3 AA3 SER A 34 VAL A 49 1 16 HELIX 4 AA4 GLY A 119 GLU A 121 5 3 HELIX 5 AA5 SER A 123 ALA A 142 1 20 HELIX 6 AA6 TYR A 149 GLU A 164 1 16 SHEET 1 AA1 3 ILE A 53 PRO A 54 0 SHEET 2 AA1 3 ILE A 96 LYS A 105 -1 O ILE A 104 N ILE A 53 SHEET 3 AA1 3 ILE A 72 VAL A 76 -1 N SER A 75 O ASN A 98 SHEET 1 AA2 3 ILE A 53 PRO A 54 0 SHEET 2 AA2 3 ILE A 96 LYS A 105 -1 O ILE A 104 N ILE A 53 SHEET 3 AA2 3 TYR A 108 ILE A 117 -1 O TYR A 108 N LYS A 105 SHEET 1 AA3 3 VAL A 79 CYS A 81 0 SHEET 2 AA3 3 VAL A 227 THR A 229 -1 O VAL A 227 N VAL A 80 SHEET 3 AA3 3 THR A 218 LEU A 220 -1 N LYS A 219 O VAL A 228 SHEET 1 AA4 3 SER A 167 VAL A 168 0 SHEET 2 AA4 3 MET A 210 ASN A 212 -1 O ASN A 212 N SER A 167 SHEET 3 AA4 3 SER A 235 GLN A 237 -1 O ALA A 236 N VAL A 211 SHEET 1 AA5 5 VAL A 187 LEU A 188 0 SHEET 2 AA5 5 GLY A 174 GLY A 176 -1 N GLY A 174 O LEU A 188 SHEET 3 AA5 5 THR A 204 ILE A 207 -1 O THR A 206 N HIS A 175 SHEET 4 AA5 5 HIS A 240 VAL A 244 -1 O ILE A 242 N PHE A 205 SHEET 5 AA5 5 ILE A 249 VAL A 251 -1 O GLU A 250 N LEU A 243 LINK O ASN A 77 NA NA A 303 1555 1555 2.33 LINK O VAL A 79 NA NA A 303 1555 1555 2.30 LINK O SER A 235 NA NA A 303 1555 1555 2.35 LINK NA NA A 303 O HOH A 428 1555 1555 2.15 SITE 1 AC1 5 SER A 123 ILE A 124 GLU A 135 TYR A 138 SITE 2 AC1 5 HOH A 489 SITE 1 AC2 4 GLU A 162 ARG A 170 HOH A 419 HOH A 520 SITE 1 AC3 4 ASN A 77 VAL A 79 SER A 235 HOH A 428 CRYST1 52.770 53.690 84.270 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018950 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018625 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011867 0.00000