HEADER IMMUNE SYSTEM 21-OCT-18 6MTQ TITLE CRYSTAL STRUCTURE OF VRC42.N1 FAB IN COMPLEX WITH T117-F MPER SCAFFOLD COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTIBODY VRC42.N1 FAB LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ANTIBODY VRC42.N1 FAB HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: VRC42 EPITOPE T117-F SCAFFOLD; COMPND 11 CHAIN: T; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 EXPRESSION_SYSTEM_CELL_LINE: HEK293F; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PVRC8400; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM_CELL_LINE: HEK293F; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PVRC8400; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 19 ORGANISM_TAXID: 11676; SOURCE 20 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 22 EXPRESSION_SYSTEM_CELL_LINE: HEK293F; SOURCE 23 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 24 EXPRESSION_SYSTEM_PLASMID: PVRC8400 KEYWDS ANTI-HIV-1 HUMAN ANTIBODY, MPER, GP41, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR Y.D.KWON,W.H.LAW,R.VERADI,N.A.DORIA-ROSE,P.D.KWONG REVDAT 3 11-OCT-23 6MTQ 1 REMARK REVDAT 2 04-DEC-19 6MTQ 1 REMARK REVDAT 1 27-MAR-19 6MTQ 0 JRNL AUTH S.J.KREBS,Y.D.KWON,C.A.SCHRAMM,W.H.LAW,G.DONOFRIO,K.H.ZHOU, JRNL AUTH 2 S.GIFT,V.DUSSUPT,I.S.GEORGIEV,S.SCHATZLE,J.R.MCDANIEL, JRNL AUTH 3 Y.T.LAI,M.SASTRY,B.ZHANG,M.C.JAROSINSKI,A.RANSIER, JRNL AUTH 4 A.L.CHENINE,M.ASOKAN,R.T.BAILER,M.BOSE,A.CAGIGI,E.M.CALE, JRNL AUTH 5 G.Y.CHUANG,S.DARKO,J.I.DRISCOLL,A.DRUZ,J.GORMAN,F.LABOUNE, JRNL AUTH 6 M.K.LOUDER,K.MCKEE,L.MENDEZ,M.A.MOODY,A.M.O'SULLIVAN,C.OWEN, JRNL AUTH 7 D.PENG,R.RAWI,E.SANDERS-BUELL,C.H.SHEN,A.R.SHIAKOLAS, JRNL AUTH 8 T.STEPHENS,Y.TSYBOVSKY,C.TUCKER,R.VERARDI,K.WANG,J.ZHOU, JRNL AUTH 9 T.ZHOU,G.GEORGIOU,S.M.ALAM,B.F.HAYNES,M.ROLLAND,G.R.MATYAS, JRNL AUTH10 V.R.POLONIS,A.B.MCDERMOTT,D.C.DOUEK,L.SHAPIRO,S.TOVANABUTRA, JRNL AUTH11 N.L.MICHAEL,J.R.MASCOLA,M.L.ROBB,P.D.KWONG,N.A.DORIA-ROSE JRNL TITL LONGITUDINAL ANALYSIS REVEALS EARLY DEVELOPMENT OF THREE JRNL TITL 2 MPER-DIRECTED NEUTRALIZING ANTIBODY LINEAGES FROM AN JRNL TITL 3 HIV-1-INFECTED INDIVIDUAL. JRNL REF IMMUNITY V. 50 677 2019 JRNL REFN ISSN 1097-4180 JRNL PMID 30876875 JRNL DOI 10.1016/J.IMMUNI.2019.02.008 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 18386 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 919 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.8505 - 5.1610 0.95 2600 137 0.1915 0.2185 REMARK 3 2 5.1610 - 4.0981 0.97 2524 133 0.1640 0.2417 REMARK 3 3 4.0981 - 3.5806 0.98 2499 131 0.1960 0.2597 REMARK 3 4 3.5806 - 3.2534 0.98 2504 132 0.2236 0.2753 REMARK 3 5 3.2534 - 3.0204 0.98 2476 131 0.2392 0.3012 REMARK 3 6 3.0204 - 2.8424 0.97 2450 129 0.2733 0.3003 REMARK 3 7 2.8424 - 2.7001 0.96 2414 126 0.2964 0.3460 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4775 REMARK 3 ANGLE : 0.492 6531 REMARK 3 CHIRALITY : 0.044 733 REMARK 3 PLANARITY : 0.004 846 REMARK 3 DIHEDRAL : 14.433 2878 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN H AND RESID 1:114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.5768 2.6159 -44.5197 REMARK 3 T TENSOR REMARK 3 T11: 0.1614 T22: 0.2327 REMARK 3 T33: 0.2884 T12: 0.0081 REMARK 3 T13: 0.0333 T23: 0.0625 REMARK 3 L TENSOR REMARK 3 L11: 2.0708 L22: 3.6113 REMARK 3 L33: 5.4904 L12: 0.7679 REMARK 3 L13: 1.3857 L23: 1.4699 REMARK 3 S TENSOR REMARK 3 S11: 0.0649 S12: 0.0214 S13: -0.1002 REMARK 3 S21: -0.1623 S22: 0.0152 S23: -0.1599 REMARK 3 S31: -0.0661 S32: 0.3722 S33: -0.0828 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN H AND RESID 125:227 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.3260 -4.3416 -11.4069 REMARK 3 T TENSOR REMARK 3 T11: 0.2579 T22: 0.4210 REMARK 3 T33: 0.2991 T12: -0.0136 REMARK 3 T13: -0.0308 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 1.5506 L22: 6.2726 REMARK 3 L33: 4.3420 L12: 0.5971 REMARK 3 L13: -0.5745 L23: -4.7999 REMARK 3 S TENSOR REMARK 3 S11: -0.1540 S12: -0.1790 S13: -0.1051 REMARK 3 S21: 0.0871 S22: -0.1376 S23: -0.4113 REMARK 3 S31: -0.0955 S32: 0.1659 S33: 0.3488 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN L AND RESID 1:108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9567 -7.7235 -36.0618 REMARK 3 T TENSOR REMARK 3 T11: 0.2269 T22: 0.3762 REMARK 3 T33: 0.3824 T12: -0.0913 REMARK 3 T13: -0.0033 T23: -0.0487 REMARK 3 L TENSOR REMARK 3 L11: 0.1711 L22: 2.0223 REMARK 3 L33: 5.7958 L12: 0.0584 REMARK 3 L13: -0.0020 L23: -1.5016 REMARK 3 S TENSOR REMARK 3 S11: 0.0752 S12: -0.1516 S13: -0.0887 REMARK 3 S21: -0.0023 S22: -0.0615 S23: 0.3590 REMARK 3 S31: 0.3582 S32: -0.3866 S33: -0.0452 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN L AND RESID 109:211 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7127 0.5813 -3.4310 REMARK 3 T TENSOR REMARK 3 T11: 0.3267 T22: 0.3732 REMARK 3 T33: 0.3022 T12: 0.0261 REMARK 3 T13: 0.0462 T23: 0.0818 REMARK 3 L TENSOR REMARK 3 L11: 6.0478 L22: 6.1479 REMARK 3 L33: 5.9164 L12: 4.1553 REMARK 3 L13: 3.0521 L23: 3.1448 REMARK 3 S TENSOR REMARK 3 S11: 0.1077 S12: -0.0576 S13: 0.2444 REMARK 3 S21: 0.2295 S22: 0.0174 S23: 0.1154 REMARK 3 S31: -0.4006 S32: -0.0240 S33: -0.0990 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN T AND RESID 11:166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7001 2.8428 -71.2516 REMARK 3 T TENSOR REMARK 3 T11: 0.4646 T22: 0.3493 REMARK 3 T33: 0.3366 T12: 0.0489 REMARK 3 T13: -0.0754 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 3.8575 L22: 4.4037 REMARK 3 L33: 4.8613 L12: -0.4777 REMARK 3 L13: -1.3621 L23: 1.2782 REMARK 3 S TENSOR REMARK 3 S11: -0.0486 S12: 0.2841 S13: 0.0932 REMARK 3 S21: -0.4665 S22: -0.0005 S23: 0.2069 REMARK 3 S31: -0.2707 S32: -0.0481 S33: 0.0347 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6MTQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1000237563. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL - LIQUID NITROGEN REMARK 200 COOLED REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18549 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.14500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.71700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6MTP, VRC42.04 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% PEG 400, 0.1M MAGNESIUM SULFATE, 2M REMARK 280 AMMONIUM SULFATE, 0.1M TRIS, PH 8.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.10300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.07600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.12850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 106.07600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.10300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.12850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY L 212 REMARK 465 GLU L 213 REMARK 465 CYS L 214 REMARK 465 SER H 139 REMARK 465 SER H 140 REMARK 465 LYS H 141 REMARK 465 SER H 142 REMARK 465 THR H 143 REMARK 465 SER H 144 REMARK 465 GLY H 145 REMARK 465 GLN T 10 REMARK 465 GLN T 167 REMARK 465 GLY T 168 REMARK 465 PRO T 169 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH H 323 O HOH H 326 1.97 REMARK 500 O HOH L 301 O HOH H 325 2.08 REMARK 500 OD1 ASP L 167 O HOH L 301 2.15 REMARK 500 OD2 ASP L 70 O HOH L 302 2.16 REMARK 500 O HOH L 308 O HOH L 311 2.17 REMARK 500 OD1 ASP L 167 O HOH L 303 2.19 REMARK 500 O HOH L 303 O HOH L 322 2.19 REMARK 500 O HOH L 301 O HOH L 303 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU L 47 -63.98 -101.99 REMARK 500 ALA L 51 -28.67 69.91 REMARK 500 ALA L 84 -162.54 -167.30 REMARK 500 PHE L 91 47.59 -147.30 REMARK 500 LYS L 93 63.54 -106.48 REMARK 500 ASN L 138 78.33 57.30 REMARK 500 SER H 25 -145.34 -131.05 REMARK 500 GLN H 43 -168.68 -123.58 REMARK 500 ASP H 156 79.48 61.54 REMARK 500 PRO T 68 -79.95 -61.61 REMARK 500 LEU T 162 -76.43 -133.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH H 330 DISTANCE = 6.84 ANGSTROMS DBREF 6MTQ L 1 214 PDB 6MTQ 6MTQ 1 214 DBREF 6MTQ H 1 227 PDB 6MTQ 6MTQ 1 227 DBREF 6MTQ T 10 169 PDB 6MTQ 6MTQ 10 169 SEQRES 1 L 215 GLU ILE VAL LEU THR GLN SER PRO ASP THR LEU SER LEU SEQRES 2 L 215 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 L 215 GLN SER VAL GLY SER SER TYR PHE ALA TRP TYR GLN GLN SEQRES 4 L 215 LYS PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR GLY ALA SEQRES 5 L 215 SER THR ARG ALA THR GLY ILE PRO GLY ARG PHE SER GLY SEQRES 6 L 215 SER GLY SER GLY THR ASP PHE THR LEU ALA ILE THR ARG SEQRES 7 L 215 VAL GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN SEQRES 8 L 215 PHE ASP LYS SER HIS VAL THR PHE GLY GLN GLY THR LYS SEQRES 9 L 215 VAL GLU PHE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 L 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 L 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 L 215 SER PHE ASN ARG GLY GLU CYS SEQRES 1 H 228 GLN VAL GLN LEU MET GLN SER GLY ALA GLU VAL LYS ARG SEQRES 2 H 228 PRO GLY SER SER VAL LYS VAL SER CYS LYS SER SER GLY SEQRES 3 H 228 GLY SER PHE SER ASP TYR THR LEU SER TRP VAL ARG GLN SEQRES 4 H 228 ALA PRO GLY GLN GLY LEU GLN TRP MET GLY SER ILE VAL SEQRES 5 H 228 PRO LEU LEU ASN LEU VAL ASN TYR ALA GLN ARG PHE GLN SEQRES 6 H 228 GLY ARG VAL THR ILE THR ALA ASP LYS SER THR SER THR SEQRES 7 H 228 ALA TYR MET GLU LEU ARG THR LEU ARG PRO GLN ASP THR SEQRES 8 H 228 ALA VAL TYR TYR CYS ALA ARG GLU GLY ALA GLU GLY TRP SEQRES 9 H 228 GLY TRP PHE ALA LYS PRO VAL GLY ALA LEU GLY VAL TRP SEQRES 10 H 228 GLY GLN GLY THR THR VAL THR VAL SER SER ALA SER THR SEQRES 11 H 228 LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SEQRES 12 H 228 SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL SEQRES 13 H 228 LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SEQRES 14 H 228 SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA SEQRES 15 H 228 VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 16 H 228 VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR SEQRES 17 H 228 ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL SEQRES 18 H 228 ASP LYS LYS VAL GLU PRO LYS SEQRES 1 T 160 GLN GLY ILE HIS PHE ARG ARG HIS TYR VAL ARG HIS LEU SEQRES 2 T 160 PRO LYS GLU VAL SER GLN ASN ASP ILE ILE LYS ALA LEU SEQRES 3 T 160 ALA SER PRO LEU ILE ASN ASP GLY MET VAL VAL SER ASP SEQRES 4 T 160 PHE ALA ASP HIS VAL ILE THR ARG GLU GLN ASN PHE PRO SEQRES 5 T 160 THR GLY LEU PRO VAL GLU PRO VAL GLY VAL ALA ILE PRO SEQRES 6 T 160 HIS THR ASP SER LYS TYR VAL ARG GLN ASN ALA ILE SER SEQRES 7 T 160 VAL GLY ILE LEU ALA GLU PRO VAL ASN PHE GLU ASP ALA SEQRES 8 T 160 GLY GLY GLU PRO ASP PRO VAL PRO VAL ARG VAL VAL PHE SEQRES 9 T 160 MET LEU ALA LEU GLY ASN TRP PHE ASP ILE THR LYS TRP SEQRES 10 T 160 LEU TRP TYR ILE LYS ALA VAL ILE GLN ASP GLU ASP PHE SEQRES 11 T 160 MET GLN GLN LEU LEU VAL MET ASN ASP ASP GLU ILE TYR SEQRES 12 T 160 GLN SER ILE TYR THR ARG ILE SER GLU LEU GLU VAL LEU SEQRES 13 T 160 PHE GLN GLY PRO FORMUL 4 HOH *59(H2 O) HELIX 1 AA1 GLY L 29 SER L 31 5 3 HELIX 2 AA2 GLU L 79 PHE L 83 5 5 HELIX 3 AA3 SER L 121 GLY L 128 1 8 HELIX 4 AA4 LYS L 183 LYS L 188 1 6 HELIX 5 AA5 GLN H 61 GLN H 64 5 4 HELIX 6 AA6 ARG H 83 THR H 87 5 5 HELIX 7 AA7 TRP H 100 ALA H 100D 5 5 HELIX 8 AA8 SER H 200 LEU H 202 5 3 HELIX 9 AA9 ARG T 15 HIS T 17 5 3 HELIX 10 AB1 SER T 27 ASP T 42 1 16 HELIX 11 AB2 ASP T 48 PHE T 60 1 13 HELIX 12 AB3 ASP T 77 VAL T 81 5 5 HELIX 13 AB4 ASN T 119 PHE T 121 5 3 HELIX 14 AB5 ASP T 122 GLN T 135 1 14 HELIX 15 AB6 ASP T 136 MET T 146 1 11 HELIX 16 AB7 ASN T 147 GLU T 161 1 15 SHEET 1 AA1 3 LEU L 4 SER L 7 0 SHEET 2 AA1 3 ALA L 19 VAL L 28 -1 O ARG L 24 N THR L 5 SHEET 3 AA1 3 PHE L 62 ILE L 75 -1 O LEU L 73 N LEU L 21 SHEET 1 AA2 6 THR L 10 LEU L 13 0 SHEET 2 AA2 6 THR L 102 PHE L 106 1 O LYS L 103 N LEU L 11 SHEET 3 AA2 6 VAL L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AA2 6 PHE L 33 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 AA2 6 ARG L 45 TYR L 49 -1 O ARG L 45 N GLN L 37 SHEET 6 AA2 6 THR L 53 ARG L 54 -1 O THR L 53 N TYR L 49 SHEET 1 AA3 4 THR L 10 LEU L 13 0 SHEET 2 AA3 4 THR L 102 PHE L 106 1 O LYS L 103 N LEU L 11 SHEET 3 AA3 4 VAL L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AA3 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AA4 4 SER L 114 PHE L 118 0 SHEET 2 AA4 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AA4 4 TYR L 173 SER L 182 -1 O LEU L 179 N VAL L 132 SHEET 4 AA4 4 SER L 159 VAL L 163 -1 N SER L 162 O SER L 176 SHEET 1 AA5 3 ALA L 144 VAL L 150 0 SHEET 2 AA5 3 VAL L 191 HIS L 198 -1 O GLU L 195 N GLN L 147 SHEET 3 AA5 3 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SHEET 1 AA6 4 MET H 5 GLN H 6 0 SHEET 2 AA6 4 VAL H 18 LYS H 23 -1 O LYS H 23 N MET H 5 SHEET 3 AA6 4 THR H 77 LEU H 82 -1 O MET H 80 N VAL H 20 SHEET 4 AA6 4 VAL H 67 ASP H 72 -1 N ASP H 72 O THR H 77 SHEET 1 AA7 6 GLU H 10 LYS H 12 0 SHEET 2 AA7 6 THR H 107 VAL H 111 1 O THR H 110 N LYS H 12 SHEET 3 AA7 6 ALA H 88 GLU H 98 -1 N TYR H 90 O THR H 107 SHEET 4 AA7 6 LEU H 34 GLN H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 AA7 6 LEU H 45 VAL H 52 -1 O ILE H 51 N LEU H 34 SHEET 6 AA7 6 LEU H 56 TYR H 59 -1 O ASN H 58 N SER H 50 SHEET 1 AA8 4 GLU H 10 LYS H 12 0 SHEET 2 AA8 4 THR H 107 VAL H 111 1 O THR H 110 N LYS H 12 SHEET 3 AA8 4 ALA H 88 GLU H 98 -1 N TYR H 90 O THR H 107 SHEET 4 AA8 4 LYS H 100E TRP H 103 -1 O VAL H 102 N ARG H 94 SHEET 1 AA9 4 SER H 130 LEU H 134 0 SHEET 2 AA9 4 THR H 147 TYR H 157 -1 O GLY H 151 N LEU H 134 SHEET 3 AA9 4 TYR H 189 PRO H 198 -1 O VAL H 197 N ALA H 148 SHEET 4 AA9 4 VAL H 175 THR H 177 -1 N HIS H 176 O VAL H 194 SHEET 1 AB1 4 SER H 130 LEU H 134 0 SHEET 2 AB1 4 THR H 147 TYR H 157 -1 O GLY H 151 N LEU H 134 SHEET 3 AB1 4 TYR H 189 PRO H 198 -1 O VAL H 197 N ALA H 148 SHEET 4 AB1 4 VAL H 181 LEU H 182 -1 N VAL H 181 O SER H 190 SHEET 1 AB2 3 THR H 163 TRP H 166 0 SHEET 2 AB2 3 TYR H 207 HIS H 213 -1 O ASN H 212 N THR H 163 SHEET 3 AB2 3 THR H 218 VAL H 224 -1 O THR H 218 N HIS H 213 SHEET 1 AB3 5 VAL T 19 LEU T 22 0 SHEET 2 AB3 5 ALA T 85 PHE T 97 1 O ILE T 90 N LEU T 22 SHEET 3 AB3 5 VAL T 107 ALA T 116 -1 O MET T 114 N SER T 87 SHEET 4 AB3 5 GLY T 70 ALA T 72 1 N ALA T 72 O PHE T 113 SHEET 5 AB3 5 GLY T 63 LEU T 64 -1 N LEU T 64 O VAL T 71 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 2 CYS L 134 CYS L 194 1555 1555 2.04 SSBOND 3 CYS H 22 CYS H 92 1555 1555 2.03 SSBOND 4 CYS H 152 CYS H 209 1555 1555 2.03 CISPEP 1 SER L 7 PRO L 8 0 -2.21 CISPEP 2 TYR L 140 PRO L 141 0 3.77 CISPEP 3 PHE H 158 PRO H 159 0 -3.21 CISPEP 4 GLU H 160 PRO H 161 0 0.10 CRYST1 44.206 70.257 212.152 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022621 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014233 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004714 0.00000