HEADER LIGASE 07-NOV-18 6N0W TITLE CRYSTAL STRUCTURE OF A TYROSINE--TRNA LIGASE FROM ELIZABETHKINGIA TITLE 2 ANOPHELIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE--TRNA LIGASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TYROSYL-TRNA SYNTHETASE,TYRRS; COMPND 5 EC: 6.1.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ELIZABETHKINGIA ANOPHELIS NUHP1; SOURCE 3 ORGANISM_TAXID: 1338011; SOURCE 4 GENE: TYRS, BD94_1246, TYRS; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NIAID, STRUCTURAL GENOMICS, AMINOACYL-TRNA LIGASE, LARGE C-TERMINAL KEYWDS 2 DISORDERED DOMAIN, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS KEYWDS 3 DISEASE, SSGCID, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 11-OCT-23 6N0W 1 REMARK REVDAT 2 15-JAN-20 6N0W 1 REMARK REVDAT 1 05-DEC-18 6N0W 0 JRNL AUTH T.E.EDWARDS,J.ABENDROTH,D.D.LORIMER,P.S.HORANYI, JRNL AUTH 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE JRNL AUTH 3 (SSGCID) JRNL TITL CRYSTAL STRUCTURE OF A TYROSINE--TRNA LIGASE FROM JRNL TITL 2 ELIZABETHKINGIA ANOPHELIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.96 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 15636 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1573 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.9648 - 6.0014 0.99 1309 187 0.2301 0.2801 REMARK 3 2 6.0014 - 4.7648 1.00 1283 158 0.2177 0.2647 REMARK 3 3 4.7648 - 4.1629 1.00 1302 140 0.1908 0.2244 REMARK 3 4 4.1629 - 3.7825 1.00 1291 128 0.2144 0.3202 REMARK 3 5 3.7825 - 3.5115 1.00 1307 126 0.2215 0.3468 REMARK 3 6 3.5115 - 3.3045 1.00 1301 112 0.2332 0.3333 REMARK 3 7 3.3045 - 3.1390 1.00 1221 164 0.2327 0.2954 REMARK 3 8 3.1390 - 3.0024 1.00 1257 162 0.2563 0.3567 REMARK 3 9 3.0024 - 2.8868 1.00 1288 115 0.2644 0.2956 REMARK 3 10 2.8868 - 2.7872 1.00 1268 146 0.2630 0.3128 REMARK 3 11 2.7872 - 2.7001 1.00 1236 135 0.2971 0.3603 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 66.78 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2787 REMARK 3 ANGLE : 0.742 3770 REMARK 3 CHIRALITY : 0.041 416 REMARK 3 PLANARITY : 0.004 484 REMARK 3 DIHEDRAL : 3.149 1625 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -45.6618 -20.6731 42.6285 REMARK 3 T TENSOR REMARK 3 T11: 0.3471 T22: 0.4966 REMARK 3 T33: 0.8975 T12: 0.0660 REMARK 3 T13: -0.0000 T23: 0.0578 REMARK 3 L TENSOR REMARK 3 L11: 2.0703 L22: 2.9210 REMARK 3 L33: 3.2742 L12: -0.0194 REMARK 3 L13: 1.3429 L23: -0.3159 REMARK 3 S TENSOR REMARK 3 S11: -0.0931 S12: -0.4568 S13: -0.4299 REMARK 3 S21: 0.3054 S22: -0.0107 S23: -0.0342 REMARK 3 S31: 0.0645 S32: -0.0765 S33: 0.1082 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 60 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.4429 -13.2648 34.5125 REMARK 3 T TENSOR REMARK 3 T11: 0.2788 T22: 0.5720 REMARK 3 T33: 0.8167 T12: 0.0393 REMARK 3 T13: -0.1371 T23: -0.0675 REMARK 3 L TENSOR REMARK 3 L11: 1.7641 L22: 3.2435 REMARK 3 L33: 2.9710 L12: 0.6966 REMARK 3 L13: 1.8252 L23: -0.4443 REMARK 3 S TENSOR REMARK 3 S11: -0.0649 S12: 0.7664 S13: -0.7339 REMARK 3 S21: -0.2625 S22: -0.1838 S23: -0.6379 REMARK 3 S31: -0.4078 S32: 0.5934 S33: 0.3670 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 90 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.6026 -6.8846 37.0226 REMARK 3 T TENSOR REMARK 3 T11: 0.4507 T22: 0.3944 REMARK 3 T33: 0.9480 T12: 0.0389 REMARK 3 T13: -0.0937 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 4.3049 L22: 2.2316 REMARK 3 L33: 5.2892 L12: 0.6729 REMARK 3 L13: 2.4559 L23: -1.8383 REMARK 3 S TENSOR REMARK 3 S11: -0.3651 S12: 0.1657 S13: 0.5073 REMARK 3 S21: 0.1507 S22: 0.0224 S23: -0.4252 REMARK 3 S31: -0.4828 S32: 0.4258 S33: 0.3290 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 139 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.6557 -27.8004 39.8858 REMARK 3 T TENSOR REMARK 3 T11: 0.3168 T22: 0.8961 REMARK 3 T33: 1.5906 T12: 0.0371 REMARK 3 T13: -0.0340 T23: 0.1708 REMARK 3 L TENSOR REMARK 3 L11: 3.8866 L22: 2.9405 REMARK 3 L33: 6.4542 L12: 0.3216 REMARK 3 L13: -0.2006 L23: -4.3436 REMARK 3 S TENSOR REMARK 3 S11: -0.3726 S12: -0.7073 S13: -1.2500 REMARK 3 S21: -0.4958 S22: -0.4403 S23: -0.0210 REMARK 3 S31: 1.3666 S32: 0.2475 S33: 0.2114 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 169 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.4441 -21.1486 43.8731 REMARK 3 T TENSOR REMARK 3 T11: 0.4103 T22: 0.5734 REMARK 3 T33: 1.1064 T12: 0.0509 REMARK 3 T13: -0.0652 T23: 0.1641 REMARK 3 L TENSOR REMARK 3 L11: 4.1336 L22: 2.7010 REMARK 3 L33: 2.3195 L12: 0.3559 REMARK 3 L13: 0.8662 L23: 0.7682 REMARK 3 S TENSOR REMARK 3 S11: -0.0832 S12: -0.2574 S13: -0.6927 REMARK 3 S21: -0.0569 S22: 0.0146 S23: -0.6290 REMARK 3 S31: -0.0980 S32: 0.4482 S33: 0.0475 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 230 THROUGH 252 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.6015 -20.4542 20.1362 REMARK 3 T TENSOR REMARK 3 T11: 0.5582 T22: 0.5554 REMARK 3 T33: 0.9057 T12: -0.1208 REMARK 3 T13: 0.2329 T23: -0.0997 REMARK 3 L TENSOR REMARK 3 L11: 9.0968 L22: 2.4048 REMARK 3 L33: 7.7955 L12: 0.8762 REMARK 3 L13: -0.3425 L23: -0.3196 REMARK 3 S TENSOR REMARK 3 S11: -0.4176 S12: 0.5041 S13: 0.6951 REMARK 3 S21: -0.1060 S22: 0.4974 S23: 0.0045 REMARK 3 S31: 0.9082 S32: 0.0755 S33: -0.0334 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 253 THROUGH 312 ) REMARK 3 ORIGIN FOR THE GROUP (A): -60.7545 -25.3437 28.4446 REMARK 3 T TENSOR REMARK 3 T11: 0.2494 T22: 0.5265 REMARK 3 T33: 0.6700 T12: -0.0175 REMARK 3 T13: 0.0792 T23: -0.0680 REMARK 3 L TENSOR REMARK 3 L11: 4.1812 L22: 7.3676 REMARK 3 L33: 4.7599 L12: 2.3231 REMARK 3 L13: -1.3006 L23: -3.8009 REMARK 3 S TENSOR REMARK 3 S11: -0.2192 S12: 0.3774 S13: -1.0308 REMARK 3 S21: -0.0152 S22: 0.1335 S23: 0.2492 REMARK 3 S31: 0.2626 S32: -0.5200 S33: 0.0658 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 313 THROUGH 345 ) REMARK 3 ORIGIN FOR THE GROUP (A): -64.2716 -11.9620 15.1358 REMARK 3 T TENSOR REMARK 3 T11: 0.3985 T22: 0.8753 REMARK 3 T33: 0.5133 T12: -0.1079 REMARK 3 T13: 0.1026 T23: 0.0042 REMARK 3 L TENSOR REMARK 3 L11: 3.6253 L22: 6.2898 REMARK 3 L33: 2.7566 L12: -3.8931 REMARK 3 L13: 2.8700 L23: -2.2907 REMARK 3 S TENSOR REMARK 3 S11: 0.0228 S12: 0.4666 S13: -0.0198 REMARK 3 S21: -0.3615 S22: 0.1342 S23: 0.0557 REMARK 3 S31: 0.4457 S32: -1.2181 S33: -0.2281 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6N0W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1000237985. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-AUG-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15648 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 47.957 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.926 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.1600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.77 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.08 REMARK 200 R MERGE FOR SHELL (I) : 0.66900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.630 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2TS1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: ELANA.01032.A.B1.PW38270 AT 26 MG/ML REMARK 280 AGAINST THE MORPHEUS SCREEN CONDITION D9: 10% PEG 20,000, 20% REMARK 280 PEG 550 MME, 0.02 M EACH ALCOHOL (1,6-HEXANEDIOL, 1-BUTANOL, R,S- REMARK 280 1,2-PROPANEDIOL, 2-PROPANOL, 1,4-BUTANEDIOL, 1,3-PROPANEDIOL), REMARK 280 0.1 M BICINE/TRIZMA BASE PH 8.5, UNIQUE PUCK ID XYO1-1, CRYSTAL REMARK 280 TRACKING ID 292624D9, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 98.64500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 18.78000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 98.64500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 18.78000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 GLY A 80 REMARK 465 LYS A 81 REMARK 465 SER A 82 REMARK 465 ALA A 83 REMARK 465 GLU A 84 REMARK 465 ARG A 85 REMARK 465 ASN A 86 REMARK 465 VAL A 154 REMARK 465 LYS A 155 REMARK 465 LYS A 156 REMARK 465 ARG A 157 REMARK 465 PHE A 158 REMARK 465 SER A 159 REMARK 465 GLY A 160 REMARK 465 GLU A 161 REMARK 465 ASP A 162 REMARK 465 SER A 331 REMARK 465 THR A 332 REMARK 465 ALA A 333 REMARK 465 GLU A 334 REMARK 465 ASP A 335 REMARK 465 GLN A 346 REMARK 465 ILE A 347 REMARK 465 PHE A 348 REMARK 465 ASP A 349 REMARK 465 GLY A 350 REMARK 465 VAL A 351 REMARK 465 PRO A 352 REMARK 465 GLN A 353 REMARK 465 LYS A 354 REMARK 465 GLU A 355 REMARK 465 VAL A 356 REMARK 465 ALA A 357 REMARK 465 LYS A 358 REMARK 465 SER A 359 REMARK 465 GLU A 360 REMARK 465 VAL A 361 REMARK 465 ILE A 362 REMARK 465 GLY A 363 REMARK 465 SER A 364 REMARK 465 ASN A 365 REMARK 465 ILE A 366 REMARK 465 VAL A 367 REMARK 465 ASP A 368 REMARK 465 LEU A 369 REMARK 465 ILE A 370 REMARK 465 SER A 371 REMARK 465 ASP A 372 REMARK 465 LYS A 373 REMARK 465 SER A 374 REMARK 465 GLY A 375 REMARK 465 PHE A 376 REMARK 465 LEU A 377 REMARK 465 LYS A 378 REMARK 465 SER A 379 REMARK 465 LYS A 380 REMARK 465 GLY A 381 REMARK 465 GLU A 382 REMARK 465 ALA A 383 REMARK 465 LYS A 384 REMARK 465 ARG A 385 REMARK 465 GLU A 386 REMARK 465 LEU A 387 REMARK 465 THR A 388 REMARK 465 GLY A 389 REMARK 465 ASN A 390 REMARK 465 ALA A 391 REMARK 465 ILE A 392 REMARK 465 SER A 393 REMARK 465 VAL A 394 REMARK 465 ASN A 395 REMARK 465 LYS A 396 REMARK 465 GLU A 397 REMARK 465 LYS A 398 REMARK 465 VAL A 399 REMARK 465 ASN A 400 REMARK 465 ASP A 401 REMARK 465 THR A 402 REMARK 465 PHE A 403 REMARK 465 GLU A 404 REMARK 465 VAL A 405 REMARK 465 SER A 406 REMARK 465 GLU A 407 REMARK 465 LYS A 408 REMARK 465 ASP A 409 REMARK 465 LEU A 410 REMARK 465 ILE A 411 REMARK 465 ASP A 412 REMARK 465 GLY A 413 REMARK 465 LYS A 414 REMARK 465 PHE A 415 REMARK 465 LEU A 416 REMARK 465 LEU A 417 REMARK 465 LEU A 418 REMARK 465 GLN A 419 REMARK 465 LYS A 420 REMARK 465 GLY A 421 REMARK 465 LYS A 422 REMARK 465 LYS A 423 REMARK 465 SER A 424 REMARK 465 TYR A 425 REMARK 465 PHE A 426 REMARK 465 ILE A 427 REMARK 465 VAL A 428 REMARK 465 LYS A 429 REMARK 465 THR A 430 REMARK 465 VAL A 431 REMARK 465 UNK A 473 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 GLU A 6 CG CD OE1 OE2 REMARK 470 ASP A 37 CG OD1 OD2 REMARK 470 SER A 79 OG REMARK 470 LEU A 87 CG CD1 CD2 REMARK 470 GLU A 91 CG CD OE1 OE2 REMARK 470 ASP A 113 CG OD1 OD2 REMARK 470 ARG A 117 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 128 CG CD CE NZ REMARK 470 ASP A 152 CG OD1 OD2 REMARK 470 SER A 153 OG REMARK 470 GLU A 171 CG CD OE1 OE2 REMARK 470 GLU A 188 CG CD OE1 OE2 REMARK 470 ASP A 231 CG OD1 OD2 REMARK 470 LYS A 234 CG CD CE NZ REMARK 470 GLU A 239 CG CD OE1 OE2 REMARK 470 LYS A 249 CG CD CE NZ REMARK 470 LYS A 322 CG CD CE NZ REMARK 470 LEU A 327 CG CD1 CD2 REMARK 470 PHE A 328 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 330 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 336 CG CD1 CD2 REMARK 470 VAL A 337 CG1 CG2 REMARK 470 GLU A 341 CG CD OE1 OE2 REMARK 470 GLU A 342 CG CD OE1 OE2 REMARK 470 LEU A 345 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 306 O HOH A 501 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 15 -63.06 -109.56 REMARK 500 ILE A 139 -61.29 -151.02 REMARK 500 GLN A 216 62.65 -101.75 REMARK 500 LYS A 234 100.57 -179.82 REMARK 500 LEU A 327 -65.44 -92.03 REMARK 500 LEU A 343 -62.78 -103.24 REMARK 500 UNK A 433 -97.86 -123.67 REMARK 500 UNK A 435 31.60 -152.58 REMARK 500 UNK A 436 -147.89 -92.36 REMARK 500 UNK A 440 70.91 -118.53 REMARK 500 UNK A 445 40.65 -98.50 REMARK 500 UNK A 449 97.58 -58.25 REMARK 500 UNK A 452 -75.31 -77.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE AUTHORS STATE THAT THE STRETCHES OF UNKNOWN RESIDUES (UNK) REMARK 999 REPRESENT DIFFERENT UNASSIGNED PORTIONS OF THE C-TERMINAL REGION OF REMARK 999 THE TARGET PROTEIN IN CHAIN A. DBREF1 6N0W A 1 431 UNP A0A077EBU6_9FLAO DBREF2 6N0W A A0A077EBU6 1 431 DBREF 6N0W A 432 473 PDB 6N0W 6N0W 432 473 SEQADV 6N0W MET A -7 UNP A0A077EBU INITIATING METHIONINE SEQADV 6N0W ALA A -6 UNP A0A077EBU EXPRESSION TAG SEQADV 6N0W HIS A -5 UNP A0A077EBU EXPRESSION TAG SEQADV 6N0W HIS A -4 UNP A0A077EBU EXPRESSION TAG SEQADV 6N0W HIS A -3 UNP A0A077EBU EXPRESSION TAG SEQADV 6N0W HIS A -2 UNP A0A077EBU EXPRESSION TAG SEQADV 6N0W HIS A -1 UNP A0A077EBU EXPRESSION TAG SEQADV 6N0W HIS A 0 UNP A0A077EBU EXPRESSION TAG SEQRES 1 A 480 MET ALA HIS HIS HIS HIS HIS HIS MET ASN ALA PHE ILE SEQRES 2 A 480 GLU GLU LEU LYS TRP ARG GLY LEU TRP ALA ASP MET THR SEQRES 3 A 480 PRO GLY THR GLU ASP GLN LEU ASN LYS GLU MET THR THR SEQRES 4 A 480 ALA TYR ILE GLY PHE ASP PRO THR ALA ASP SER LEU HIS SEQRES 5 A 480 ILE GLY SER LEU ILE PRO ILE LYS ILE LEU ALA HIS PHE SEQRES 6 A 480 GLN ARG HIS GLY HIS LYS PRO ILE ALA LEU VAL GLY GLY SEQRES 7 A 480 ALA THR GLY MET ILE GLY ASP PRO SER GLY LYS SER ALA SEQRES 8 A 480 GLU ARG ASN LEU LEU ASP GLU GLU THR LEU LEU TYR TYR SEQRES 9 A 480 VAL ASP CYS LEU LYS ASN GLN LEU SER ARG PHE LEU ASP SEQRES 10 A 480 PHE GLU GLY ASP GLY PRO ASN ARG ALA GLU LEU VAL ASN SEQRES 11 A 480 ASN TYR ASP TRP MET LYS ASN VAL THR PHE LEU ASP PHE SEQRES 12 A 480 ALA LYS ASN ILE GLY LYS HIS ILE THR VAL ASN TYR MET SEQRES 13 A 480 MET ALA LYS ASP SER VAL LYS LYS ARG PHE SER GLY GLU SEQRES 14 A 480 ASP GLY ALA ASP GLY MET SER PHE THR GLU PHE THR TYR SEQRES 15 A 480 GLN LEU LEU GLN GLY TYR ASP TYR LEU HIS LEU TYR LYS SEQRES 16 A 480 GLU LYS GLY VAL LYS LEU GLN MET GLY GLY SER ASP GLN SEQRES 17 A 480 TRP GLY ASN ILE THR THR GLY THR GLU LEU ILE ARG ARG SEQRES 18 A 480 LYS ALA GLN GLY GLU ALA PHE ALA LEU THR THR LYS LEU SEQRES 19 A 480 ILE THR LYS ALA ASP GLY SER LYS PHE GLY LYS SER GLU SEQRES 20 A 480 SER GLY GLU ASN TYR TRP LEU ASP ALA LYS ARG THR SER SEQRES 21 A 480 PRO TYR ARG PHE TYR GLN PHE TRP LEU ASN ALA THR ASP SEQRES 22 A 480 GLU ASP GLY GLU ARG PHE ILE LYS PHE TYR THR PHE LEU SEQRES 23 A 480 GLU LYS GLU GLU ILE ASP LYS LEU ILE GLU GLU HIS ARG SEQRES 24 A 480 THR ALA PRO HIS GLU ARG LYS LEU GLN LYS LYS LEU ALA SEQRES 25 A 480 GLU GLU VAL THR VAL TRP VAL HIS GLY ARG ALA GLU TYR SEQRES 26 A 480 LYS ARG ALA LEU LYS ALA SER GLU ILE LEU PHE GLY ARG SEQRES 27 A 480 SER THR ALA GLU ASP LEU VAL SER LEU ASP GLU GLU LEU SEQRES 28 A 480 PHE LEU GLN ILE PHE ASP GLY VAL PRO GLN LYS GLU VAL SEQRES 29 A 480 ALA LYS SER GLU VAL ILE GLY SER ASN ILE VAL ASP LEU SEQRES 30 A 480 ILE SER ASP LYS SER GLY PHE LEU LYS SER LYS GLY GLU SEQRES 31 A 480 ALA LYS ARG GLU LEU THR GLY ASN ALA ILE SER VAL ASN SEQRES 32 A 480 LYS GLU LYS VAL ASN ASP THR PHE GLU VAL SER GLU LYS SEQRES 33 A 480 ASP LEU ILE ASP GLY LYS PHE LEU LEU LEU GLN LYS GLY SEQRES 34 A 480 LYS LYS SER TYR PHE ILE VAL LYS THR VAL UNK UNK UNK SEQRES 35 A 480 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 36 A 480 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 37 A 480 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK FORMUL 2 HOH *30(H2 O) HELIX 1 AA1 ASN A 2 ARG A 11 1 10 HELIX 2 AA2 GLY A 20 GLU A 28 1 9 HELIX 3 AA3 HIS A 44 GLY A 46 5 3 HELIX 4 AA4 SER A 47 HIS A 60 1 14 HELIX 5 AA5 GLY A 69 MET A 74 1 6 HELIX 6 AA6 ASP A 89 SER A 105 1 17 HELIX 7 AA7 ASN A 123 LYS A 128 1 6 HELIX 8 AA8 THR A 131 ILE A 139 1 9 HELIX 9 AA9 GLY A 140 ILE A 143 5 4 HELIX 10 AB1 THR A 144 ALA A 150 1 7 HELIX 11 AB2 THR A 173 LYS A 189 1 17 HELIX 12 AB3 GLN A 200 LYS A 214 1 15 HELIX 13 AB4 SER A 252 ASN A 262 1 11 HELIX 14 AB5 THR A 264 TYR A 275 1 12 HELIX 15 AB6 GLU A 279 ALA A 293 1 15 HELIX 16 AB7 PRO A 294 GLU A 296 5 3 HELIX 17 AB8 ARG A 297 GLY A 313 1 17 HELIX 18 AB9 GLY A 313 GLY A 329 1 17 HELIX 19 AC1 ASP A 340 LEU A 345 1 6 HELIX 20 AC2 UNK A 442 UNK A 447 5 6 HELIX 21 AC3 UNK A 449 UNK A 454 1 6 SHEET 1 AA1 6 TRP A 14 MET A 17 0 SHEET 2 AA1 6 PHE A 220 THR A 224 -1 O THR A 223 N ASP A 16 SHEET 3 AA1 6 VAL A 191 GLY A 197 1 N GLY A 196 O THR A 224 SHEET 4 AA1 6 THR A 31 PHE A 36 1 N TYR A 33 O MET A 195 SHEET 5 AA1 6 LYS A 63 VAL A 68 1 O LEU A 67 N PHE A 36 SHEET 6 AA1 6 GLU A 119 ASN A 122 1 O VAL A 121 N VAL A 68 SHEET 1 AA2 2 UNK A 458 UNK A 462 0 SHEET 2 AA2 2 UNK A 467 UNK A 471 -1 O UNK A 468 N UNK A 461 CRYST1 197.290 37.560 81.760 90.00 112.40 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005069 0.000000 0.002089 0.00000 SCALE2 0.000000 0.026624 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013229 0.00000