data_6N37 # _entry.id 6N37 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6N37 pdb_00006n37 10.2210/pdb6n37/pdb WWPDB D_1000238101 ? ? EMDB EMD-9339 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-06-26 2 'Structure model' 1 1 2019-07-10 3 'Structure model' 1 2 2019-07-17 4 'Structure model' 1 3 2019-12-18 5 'Structure model' 1 4 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Author supporting evidence' 6 4 'Structure model' Other 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 4 'Structure model' atom_sites 5 4 'Structure model' pdbx_audit_support 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 2 'Structure model' '_citation.title' 3 3 'Structure model' '_citation.journal_volume' 4 3 'Structure model' '_citation.page_first' 5 3 'Structure model' '_citation.page_last' 6 4 'Structure model' '_atom_sites.fract_transf_matrix[1][1]' 7 4 'Structure model' '_atom_sites.fract_transf_matrix[2][2]' 8 4 'Structure model' '_atom_sites.fract_transf_matrix[3][3]' 9 4 'Structure model' '_pdbx_audit_support.funding_organization' 10 5 'Structure model' '_database_2.pdbx_DOI' 11 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6N37 _pdbx_database_status.recvd_initial_deposition_date 2018-11-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'SegA-sym, conformation of TDP-43 low complexity domain segment A sym' _pdbx_database_related.db_id EMD-9339 _pdbx_database_related.content_type 'associated EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Cao, Q.' 1 0000-0003-4207-2697 'Boyer, D.R.' 2 0000-0002-4487-0230 'Sawaya, M.R.' 3 0000-0003-0874-9043 'Eisenberg, D.S.' 4 0000-0003-2432-5419 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1545-9985 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 26 _citation.language ? _citation.page_first 619 _citation.page_last 627 _citation.title 'Cryo-EM structures of four polymorphic TDP-43 amyloid cores.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41594-019-0248-4 _citation.pdbx_database_id_PubMed 31235914 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cao, Q.' 1 ? primary 'Boyer, D.R.' 2 ? primary 'Sawaya, M.R.' 3 ? primary 'Ge, P.' 4 ? primary 'Eisenberg, D.S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'TAR DNA-binding protein 43' _entity.formula_weight 5207.797 _entity.pdbx_number_of_molecules 10 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'TDP-43, SegA' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQNQGNMQ _entity_poly.pdbx_seq_one_letter_code_can MNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQNQGNMQ _entity_poly.pdbx_strand_id A,B,C,D,E,F,G,H,I,J _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 PHE n 1 4 GLY n 1 5 ALA n 1 6 PHE n 1 7 SER n 1 8 ILE n 1 9 ASN n 1 10 PRO n 1 11 ALA n 1 12 MET n 1 13 MET n 1 14 ALA n 1 15 ALA n 1 16 ALA n 1 17 GLN n 1 18 ALA n 1 19 ALA n 1 20 LEU n 1 21 GLN n 1 22 SER n 1 23 SER n 1 24 TRP n 1 25 GLY n 1 26 MET n 1 27 MET n 1 28 GLY n 1 29 MET n 1 30 LEU n 1 31 ALA n 1 32 SER n 1 33 GLN n 1 34 GLN n 1 35 ASN n 1 36 GLN n 1 37 SER n 1 38 GLY n 1 39 PRO n 1 40 SER n 1 41 GLY n 1 42 ASN n 1 43 ASN n 1 44 GLN n 1 45 ASN n 1 46 GLN n 1 47 GLY n 1 48 ASN n 1 49 MET n 1 50 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 50 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'TARDBP, TDP43' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 311 ? ? ? A . n A 1 2 ASN 2 312 312 ASN ASN A . n A 1 3 PHE 3 313 313 PHE PHE A . n A 1 4 GLY 4 314 314 GLY GLY A . n A 1 5 ALA 5 315 315 ALA ALA A . n A 1 6 PHE 6 316 316 PHE PHE A . n A 1 7 SER 7 317 317 SER SER A . n A 1 8 ILE 8 318 318 ILE ILE A . n A 1 9 ASN 9 319 319 ASN ASN A . n A 1 10 PRO 10 320 320 PRO PRO A . n A 1 11 ALA 11 321 321 ALA ALA A . n A 1 12 MET 12 322 322 MET MET A . n A 1 13 MET 13 323 323 MET MET A . n A 1 14 ALA 14 324 324 ALA ALA A . n A 1 15 ALA 15 325 325 ALA ALA A . n A 1 16 ALA 16 326 326 ALA ALA A . n A 1 17 GLN 17 327 327 GLN GLN A . n A 1 18 ALA 18 328 328 ALA ALA A . n A 1 19 ALA 19 329 329 ALA ALA A . n A 1 20 LEU 20 330 330 LEU LEU A . n A 1 21 GLN 21 331 331 GLN GLN A . n A 1 22 SER 22 332 332 SER SER A . n A 1 23 SER 23 333 333 SER SER A . n A 1 24 TRP 24 334 334 TRP TRP A . n A 1 25 GLY 25 335 335 GLY GLY A . n A 1 26 MET 26 336 336 MET MET A . n A 1 27 MET 27 337 337 MET MET A . n A 1 28 GLY 28 338 338 GLY GLY A . n A 1 29 MET 29 339 339 MET MET A . n A 1 30 LEU 30 340 340 LEU LEU A . n A 1 31 ALA 31 341 341 ALA ALA A . n A 1 32 SER 32 342 342 SER SER A . n A 1 33 GLN 33 343 343 GLN GLN A . n A 1 34 GLN 34 344 344 GLN GLN A . n A 1 35 ASN 35 345 345 ASN ASN A . n A 1 36 GLN 36 346 346 GLN GLN A . n A 1 37 SER 37 347 347 SER SER A . n A 1 38 GLY 38 348 ? ? ? A . n A 1 39 PRO 39 349 ? ? ? A . n A 1 40 SER 40 350 ? ? ? A . n A 1 41 GLY 41 351 ? ? ? A . n A 1 42 ASN 42 352 ? ? ? A . n A 1 43 ASN 43 353 ? ? ? A . n A 1 44 GLN 44 354 ? ? ? A . n A 1 45 ASN 45 355 ? ? ? A . n A 1 46 GLN 46 356 ? ? ? A . n A 1 47 GLY 47 357 ? ? ? A . n A 1 48 ASN 48 358 ? ? ? A . n A 1 49 MET 49 359 ? ? ? A . n A 1 50 GLN 50 360 ? ? ? A . n B 1 1 MET 1 311 ? ? ? B . n B 1 2 ASN 2 312 312 ASN ASN B . n B 1 3 PHE 3 313 313 PHE PHE B . n B 1 4 GLY 4 314 314 GLY GLY B . n B 1 5 ALA 5 315 315 ALA ALA B . n B 1 6 PHE 6 316 316 PHE PHE B . n B 1 7 SER 7 317 317 SER SER B . n B 1 8 ILE 8 318 318 ILE ILE B . n B 1 9 ASN 9 319 319 ASN ASN B . n B 1 10 PRO 10 320 320 PRO PRO B . n B 1 11 ALA 11 321 321 ALA ALA B . n B 1 12 MET 12 322 322 MET MET B . n B 1 13 MET 13 323 323 MET MET B . n B 1 14 ALA 14 324 324 ALA ALA B . n B 1 15 ALA 15 325 325 ALA ALA B . n B 1 16 ALA 16 326 326 ALA ALA B . n B 1 17 GLN 17 327 327 GLN GLN B . n B 1 18 ALA 18 328 328 ALA ALA B . n B 1 19 ALA 19 329 329 ALA ALA B . n B 1 20 LEU 20 330 330 LEU LEU B . n B 1 21 GLN 21 331 331 GLN GLN B . n B 1 22 SER 22 332 332 SER SER B . n B 1 23 SER 23 333 333 SER SER B . n B 1 24 TRP 24 334 334 TRP TRP B . n B 1 25 GLY 25 335 335 GLY GLY B . n B 1 26 MET 26 336 336 MET MET B . n B 1 27 MET 27 337 337 MET MET B . n B 1 28 GLY 28 338 338 GLY GLY B . n B 1 29 MET 29 339 339 MET MET B . n B 1 30 LEU 30 340 340 LEU LEU B . n B 1 31 ALA 31 341 341 ALA ALA B . n B 1 32 SER 32 342 342 SER SER B . n B 1 33 GLN 33 343 343 GLN GLN B . n B 1 34 GLN 34 344 344 GLN GLN B . n B 1 35 ASN 35 345 345 ASN ASN B . n B 1 36 GLN 36 346 346 GLN GLN B . n B 1 37 SER 37 347 347 SER SER B . n B 1 38 GLY 38 348 ? ? ? B . n B 1 39 PRO 39 349 ? ? ? B . n B 1 40 SER 40 350 ? ? ? B . n B 1 41 GLY 41 351 ? ? ? B . n B 1 42 ASN 42 352 ? ? ? B . n B 1 43 ASN 43 353 ? ? ? B . n B 1 44 GLN 44 354 ? ? ? B . n B 1 45 ASN 45 355 ? ? ? B . n B 1 46 GLN 46 356 ? ? ? B . n B 1 47 GLY 47 357 ? ? ? B . n B 1 48 ASN 48 358 ? ? ? B . n B 1 49 MET 49 359 ? ? ? B . n B 1 50 GLN 50 360 ? ? ? B . n C 1 1 MET 1 311 ? ? ? C . n C 1 2 ASN 2 312 312 ASN ASN C . n C 1 3 PHE 3 313 313 PHE PHE C . n C 1 4 GLY 4 314 314 GLY GLY C . n C 1 5 ALA 5 315 315 ALA ALA C . n C 1 6 PHE 6 316 316 PHE PHE C . n C 1 7 SER 7 317 317 SER SER C . n C 1 8 ILE 8 318 318 ILE ILE C . n C 1 9 ASN 9 319 319 ASN ASN C . n C 1 10 PRO 10 320 320 PRO PRO C . n C 1 11 ALA 11 321 321 ALA ALA C . n C 1 12 MET 12 322 322 MET MET C . n C 1 13 MET 13 323 323 MET MET C . n C 1 14 ALA 14 324 324 ALA ALA C . n C 1 15 ALA 15 325 325 ALA ALA C . n C 1 16 ALA 16 326 326 ALA ALA C . n C 1 17 GLN 17 327 327 GLN GLN C . n C 1 18 ALA 18 328 328 ALA ALA C . n C 1 19 ALA 19 329 329 ALA ALA C . n C 1 20 LEU 20 330 330 LEU LEU C . n C 1 21 GLN 21 331 331 GLN GLN C . n C 1 22 SER 22 332 332 SER SER C . n C 1 23 SER 23 333 333 SER SER C . n C 1 24 TRP 24 334 334 TRP TRP C . n C 1 25 GLY 25 335 335 GLY GLY C . n C 1 26 MET 26 336 336 MET MET C . n C 1 27 MET 27 337 337 MET MET C . n C 1 28 GLY 28 338 338 GLY GLY C . n C 1 29 MET 29 339 339 MET MET C . n C 1 30 LEU 30 340 340 LEU LEU C . n C 1 31 ALA 31 341 341 ALA ALA C . n C 1 32 SER 32 342 342 SER SER C . n C 1 33 GLN 33 343 343 GLN GLN C . n C 1 34 GLN 34 344 344 GLN GLN C . n C 1 35 ASN 35 345 345 ASN ASN C . n C 1 36 GLN 36 346 346 GLN GLN C . n C 1 37 SER 37 347 347 SER SER C . n C 1 38 GLY 38 348 ? ? ? C . n C 1 39 PRO 39 349 ? ? ? C . n C 1 40 SER 40 350 ? ? ? C . n C 1 41 GLY 41 351 ? ? ? C . n C 1 42 ASN 42 352 ? ? ? C . n C 1 43 ASN 43 353 ? ? ? C . n C 1 44 GLN 44 354 ? ? ? C . n C 1 45 ASN 45 355 ? ? ? C . n C 1 46 GLN 46 356 ? ? ? C . n C 1 47 GLY 47 357 ? ? ? C . n C 1 48 ASN 48 358 ? ? ? C . n C 1 49 MET 49 359 ? ? ? C . n C 1 50 GLN 50 360 ? ? ? C . n D 1 1 MET 1 311 ? ? ? D . n D 1 2 ASN 2 312 312 ASN ASN D . n D 1 3 PHE 3 313 313 PHE PHE D . n D 1 4 GLY 4 314 314 GLY GLY D . n D 1 5 ALA 5 315 315 ALA ALA D . n D 1 6 PHE 6 316 316 PHE PHE D . n D 1 7 SER 7 317 317 SER SER D . n D 1 8 ILE 8 318 318 ILE ILE D . n D 1 9 ASN 9 319 319 ASN ASN D . n D 1 10 PRO 10 320 320 PRO PRO D . n D 1 11 ALA 11 321 321 ALA ALA D . n D 1 12 MET 12 322 322 MET MET D . n D 1 13 MET 13 323 323 MET MET D . n D 1 14 ALA 14 324 324 ALA ALA D . n D 1 15 ALA 15 325 325 ALA ALA D . n D 1 16 ALA 16 326 326 ALA ALA D . n D 1 17 GLN 17 327 327 GLN GLN D . n D 1 18 ALA 18 328 328 ALA ALA D . n D 1 19 ALA 19 329 329 ALA ALA D . n D 1 20 LEU 20 330 330 LEU LEU D . n D 1 21 GLN 21 331 331 GLN GLN D . n D 1 22 SER 22 332 332 SER SER D . n D 1 23 SER 23 333 333 SER SER D . n D 1 24 TRP 24 334 334 TRP TRP D . n D 1 25 GLY 25 335 335 GLY GLY D . n D 1 26 MET 26 336 336 MET MET D . n D 1 27 MET 27 337 337 MET MET D . n D 1 28 GLY 28 338 338 GLY GLY D . n D 1 29 MET 29 339 339 MET MET D . n D 1 30 LEU 30 340 340 LEU LEU D . n D 1 31 ALA 31 341 341 ALA ALA D . n D 1 32 SER 32 342 342 SER SER D . n D 1 33 GLN 33 343 343 GLN GLN D . n D 1 34 GLN 34 344 344 GLN GLN D . n D 1 35 ASN 35 345 345 ASN ASN D . n D 1 36 GLN 36 346 346 GLN GLN D . n D 1 37 SER 37 347 347 SER SER D . n D 1 38 GLY 38 348 ? ? ? D . n D 1 39 PRO 39 349 ? ? ? D . n D 1 40 SER 40 350 ? ? ? D . n D 1 41 GLY 41 351 ? ? ? D . n D 1 42 ASN 42 352 ? ? ? D . n D 1 43 ASN 43 353 ? ? ? D . n D 1 44 GLN 44 354 ? ? ? D . n D 1 45 ASN 45 355 ? ? ? D . n D 1 46 GLN 46 356 ? ? ? D . n D 1 47 GLY 47 357 ? ? ? D . n D 1 48 ASN 48 358 ? ? ? D . n D 1 49 MET 49 359 ? ? ? D . n D 1 50 GLN 50 360 ? ? ? D . n E 1 1 MET 1 311 ? ? ? E . n E 1 2 ASN 2 312 312 ASN ASN E . n E 1 3 PHE 3 313 313 PHE PHE E . n E 1 4 GLY 4 314 314 GLY GLY E . n E 1 5 ALA 5 315 315 ALA ALA E . n E 1 6 PHE 6 316 316 PHE PHE E . n E 1 7 SER 7 317 317 SER SER E . n E 1 8 ILE 8 318 318 ILE ILE E . n E 1 9 ASN 9 319 319 ASN ASN E . n E 1 10 PRO 10 320 320 PRO PRO E . n E 1 11 ALA 11 321 321 ALA ALA E . n E 1 12 MET 12 322 322 MET MET E . n E 1 13 MET 13 323 323 MET MET E . n E 1 14 ALA 14 324 324 ALA ALA E . n E 1 15 ALA 15 325 325 ALA ALA E . n E 1 16 ALA 16 326 326 ALA ALA E . n E 1 17 GLN 17 327 327 GLN GLN E . n E 1 18 ALA 18 328 328 ALA ALA E . n E 1 19 ALA 19 329 329 ALA ALA E . n E 1 20 LEU 20 330 330 LEU LEU E . n E 1 21 GLN 21 331 331 GLN GLN E . n E 1 22 SER 22 332 332 SER SER E . n E 1 23 SER 23 333 333 SER SER E . n E 1 24 TRP 24 334 334 TRP TRP E . n E 1 25 GLY 25 335 335 GLY GLY E . n E 1 26 MET 26 336 336 MET MET E . n E 1 27 MET 27 337 337 MET MET E . n E 1 28 GLY 28 338 338 GLY GLY E . n E 1 29 MET 29 339 339 MET MET E . n E 1 30 LEU 30 340 340 LEU LEU E . n E 1 31 ALA 31 341 341 ALA ALA E . n E 1 32 SER 32 342 342 SER SER E . n E 1 33 GLN 33 343 343 GLN GLN E . n E 1 34 GLN 34 344 344 GLN GLN E . n E 1 35 ASN 35 345 345 ASN ASN E . n E 1 36 GLN 36 346 346 GLN GLN E . n E 1 37 SER 37 347 347 SER SER E . n E 1 38 GLY 38 348 ? ? ? E . n E 1 39 PRO 39 349 ? ? ? E . n E 1 40 SER 40 350 ? ? ? E . n E 1 41 GLY 41 351 ? ? ? E . n E 1 42 ASN 42 352 ? ? ? E . n E 1 43 ASN 43 353 ? ? ? E . n E 1 44 GLN 44 354 ? ? ? E . n E 1 45 ASN 45 355 ? ? ? E . n E 1 46 GLN 46 356 ? ? ? E . n E 1 47 GLY 47 357 ? ? ? E . n E 1 48 ASN 48 358 ? ? ? E . n E 1 49 MET 49 359 ? ? ? E . n E 1 50 GLN 50 360 ? ? ? E . n F 1 1 MET 1 311 ? ? ? F . n F 1 2 ASN 2 312 312 ASN ASN F . n F 1 3 PHE 3 313 313 PHE PHE F . n F 1 4 GLY 4 314 314 GLY GLY F . n F 1 5 ALA 5 315 315 ALA ALA F . n F 1 6 PHE 6 316 316 PHE PHE F . n F 1 7 SER 7 317 317 SER SER F . n F 1 8 ILE 8 318 318 ILE ILE F . n F 1 9 ASN 9 319 319 ASN ASN F . n F 1 10 PRO 10 320 320 PRO PRO F . n F 1 11 ALA 11 321 321 ALA ALA F . n F 1 12 MET 12 322 322 MET MET F . n F 1 13 MET 13 323 323 MET MET F . n F 1 14 ALA 14 324 324 ALA ALA F . n F 1 15 ALA 15 325 325 ALA ALA F . n F 1 16 ALA 16 326 326 ALA ALA F . n F 1 17 GLN 17 327 327 GLN GLN F . n F 1 18 ALA 18 328 328 ALA ALA F . n F 1 19 ALA 19 329 329 ALA ALA F . n F 1 20 LEU 20 330 330 LEU LEU F . n F 1 21 GLN 21 331 331 GLN GLN F . n F 1 22 SER 22 332 332 SER SER F . n F 1 23 SER 23 333 333 SER SER F . n F 1 24 TRP 24 334 334 TRP TRP F . n F 1 25 GLY 25 335 335 GLY GLY F . n F 1 26 MET 26 336 336 MET MET F . n F 1 27 MET 27 337 337 MET MET F . n F 1 28 GLY 28 338 338 GLY GLY F . n F 1 29 MET 29 339 339 MET MET F . n F 1 30 LEU 30 340 340 LEU LEU F . n F 1 31 ALA 31 341 341 ALA ALA F . n F 1 32 SER 32 342 342 SER SER F . n F 1 33 GLN 33 343 343 GLN GLN F . n F 1 34 GLN 34 344 344 GLN GLN F . n F 1 35 ASN 35 345 345 ASN ASN F . n F 1 36 GLN 36 346 346 GLN GLN F . n F 1 37 SER 37 347 347 SER SER F . n F 1 38 GLY 38 348 ? ? ? F . n F 1 39 PRO 39 349 ? ? ? F . n F 1 40 SER 40 350 ? ? ? F . n F 1 41 GLY 41 351 ? ? ? F . n F 1 42 ASN 42 352 ? ? ? F . n F 1 43 ASN 43 353 ? ? ? F . n F 1 44 GLN 44 354 ? ? ? F . n F 1 45 ASN 45 355 ? ? ? F . n F 1 46 GLN 46 356 ? ? ? F . n F 1 47 GLY 47 357 ? ? ? F . n F 1 48 ASN 48 358 ? ? ? F . n F 1 49 MET 49 359 ? ? ? F . n F 1 50 GLN 50 360 ? ? ? F . n G 1 1 MET 1 311 ? ? ? G . n G 1 2 ASN 2 312 312 ASN ASN G . n G 1 3 PHE 3 313 313 PHE PHE G . n G 1 4 GLY 4 314 314 GLY GLY G . n G 1 5 ALA 5 315 315 ALA ALA G . n G 1 6 PHE 6 316 316 PHE PHE G . n G 1 7 SER 7 317 317 SER SER G . n G 1 8 ILE 8 318 318 ILE ILE G . n G 1 9 ASN 9 319 319 ASN ASN G . n G 1 10 PRO 10 320 320 PRO PRO G . n G 1 11 ALA 11 321 321 ALA ALA G . n G 1 12 MET 12 322 322 MET MET G . n G 1 13 MET 13 323 323 MET MET G . n G 1 14 ALA 14 324 324 ALA ALA G . n G 1 15 ALA 15 325 325 ALA ALA G . n G 1 16 ALA 16 326 326 ALA ALA G . n G 1 17 GLN 17 327 327 GLN GLN G . n G 1 18 ALA 18 328 328 ALA ALA G . n G 1 19 ALA 19 329 329 ALA ALA G . n G 1 20 LEU 20 330 330 LEU LEU G . n G 1 21 GLN 21 331 331 GLN GLN G . n G 1 22 SER 22 332 332 SER SER G . n G 1 23 SER 23 333 333 SER SER G . n G 1 24 TRP 24 334 334 TRP TRP G . n G 1 25 GLY 25 335 335 GLY GLY G . n G 1 26 MET 26 336 336 MET MET G . n G 1 27 MET 27 337 337 MET MET G . n G 1 28 GLY 28 338 338 GLY GLY G . n G 1 29 MET 29 339 339 MET MET G . n G 1 30 LEU 30 340 340 LEU LEU G . n G 1 31 ALA 31 341 341 ALA ALA G . n G 1 32 SER 32 342 342 SER SER G . n G 1 33 GLN 33 343 343 GLN GLN G . n G 1 34 GLN 34 344 344 GLN GLN G . n G 1 35 ASN 35 345 345 ASN ASN G . n G 1 36 GLN 36 346 346 GLN GLN G . n G 1 37 SER 37 347 347 SER SER G . n G 1 38 GLY 38 348 ? ? ? G . n G 1 39 PRO 39 349 ? ? ? G . n G 1 40 SER 40 350 ? ? ? G . n G 1 41 GLY 41 351 ? ? ? G . n G 1 42 ASN 42 352 ? ? ? G . n G 1 43 ASN 43 353 ? ? ? G . n G 1 44 GLN 44 354 ? ? ? G . n G 1 45 ASN 45 355 ? ? ? G . n G 1 46 GLN 46 356 ? ? ? G . n G 1 47 GLY 47 357 ? ? ? G . n G 1 48 ASN 48 358 ? ? ? G . n G 1 49 MET 49 359 ? ? ? G . n G 1 50 GLN 50 360 ? ? ? G . n H 1 1 MET 1 311 ? ? ? H . n H 1 2 ASN 2 312 312 ASN ASN H . n H 1 3 PHE 3 313 313 PHE PHE H . n H 1 4 GLY 4 314 314 GLY GLY H . n H 1 5 ALA 5 315 315 ALA ALA H . n H 1 6 PHE 6 316 316 PHE PHE H . n H 1 7 SER 7 317 317 SER SER H . n H 1 8 ILE 8 318 318 ILE ILE H . n H 1 9 ASN 9 319 319 ASN ASN H . n H 1 10 PRO 10 320 320 PRO PRO H . n H 1 11 ALA 11 321 321 ALA ALA H . n H 1 12 MET 12 322 322 MET MET H . n H 1 13 MET 13 323 323 MET MET H . n H 1 14 ALA 14 324 324 ALA ALA H . n H 1 15 ALA 15 325 325 ALA ALA H . n H 1 16 ALA 16 326 326 ALA ALA H . n H 1 17 GLN 17 327 327 GLN GLN H . n H 1 18 ALA 18 328 328 ALA ALA H . n H 1 19 ALA 19 329 329 ALA ALA H . n H 1 20 LEU 20 330 330 LEU LEU H . n H 1 21 GLN 21 331 331 GLN GLN H . n H 1 22 SER 22 332 332 SER SER H . n H 1 23 SER 23 333 333 SER SER H . n H 1 24 TRP 24 334 334 TRP TRP H . n H 1 25 GLY 25 335 335 GLY GLY H . n H 1 26 MET 26 336 336 MET MET H . n H 1 27 MET 27 337 337 MET MET H . n H 1 28 GLY 28 338 338 GLY GLY H . n H 1 29 MET 29 339 339 MET MET H . n H 1 30 LEU 30 340 340 LEU LEU H . n H 1 31 ALA 31 341 341 ALA ALA H . n H 1 32 SER 32 342 342 SER SER H . n H 1 33 GLN 33 343 343 GLN GLN H . n H 1 34 GLN 34 344 344 GLN GLN H . n H 1 35 ASN 35 345 345 ASN ASN H . n H 1 36 GLN 36 346 346 GLN GLN H . n H 1 37 SER 37 347 347 SER SER H . n H 1 38 GLY 38 348 ? ? ? H . n H 1 39 PRO 39 349 ? ? ? H . n H 1 40 SER 40 350 ? ? ? H . n H 1 41 GLY 41 351 ? ? ? H . n H 1 42 ASN 42 352 ? ? ? H . n H 1 43 ASN 43 353 ? ? ? H . n H 1 44 GLN 44 354 ? ? ? H . n H 1 45 ASN 45 355 ? ? ? H . n H 1 46 GLN 46 356 ? ? ? H . n H 1 47 GLY 47 357 ? ? ? H . n H 1 48 ASN 48 358 ? ? ? H . n H 1 49 MET 49 359 ? ? ? H . n H 1 50 GLN 50 360 ? ? ? H . n I 1 1 MET 1 311 ? ? ? I . n I 1 2 ASN 2 312 312 ASN ASN I . n I 1 3 PHE 3 313 313 PHE PHE I . n I 1 4 GLY 4 314 314 GLY GLY I . n I 1 5 ALA 5 315 315 ALA ALA I . n I 1 6 PHE 6 316 316 PHE PHE I . n I 1 7 SER 7 317 317 SER SER I . n I 1 8 ILE 8 318 318 ILE ILE I . n I 1 9 ASN 9 319 319 ASN ASN I . n I 1 10 PRO 10 320 320 PRO PRO I . n I 1 11 ALA 11 321 321 ALA ALA I . n I 1 12 MET 12 322 322 MET MET I . n I 1 13 MET 13 323 323 MET MET I . n I 1 14 ALA 14 324 324 ALA ALA I . n I 1 15 ALA 15 325 325 ALA ALA I . n I 1 16 ALA 16 326 326 ALA ALA I . n I 1 17 GLN 17 327 327 GLN GLN I . n I 1 18 ALA 18 328 328 ALA ALA I . n I 1 19 ALA 19 329 329 ALA ALA I . n I 1 20 LEU 20 330 330 LEU LEU I . n I 1 21 GLN 21 331 331 GLN GLN I . n I 1 22 SER 22 332 332 SER SER I . n I 1 23 SER 23 333 333 SER SER I . n I 1 24 TRP 24 334 334 TRP TRP I . n I 1 25 GLY 25 335 335 GLY GLY I . n I 1 26 MET 26 336 336 MET MET I . n I 1 27 MET 27 337 337 MET MET I . n I 1 28 GLY 28 338 338 GLY GLY I . n I 1 29 MET 29 339 339 MET MET I . n I 1 30 LEU 30 340 340 LEU LEU I . n I 1 31 ALA 31 341 341 ALA ALA I . n I 1 32 SER 32 342 342 SER SER I . n I 1 33 GLN 33 343 343 GLN GLN I . n I 1 34 GLN 34 344 344 GLN GLN I . n I 1 35 ASN 35 345 345 ASN ASN I . n I 1 36 GLN 36 346 346 GLN GLN I . n I 1 37 SER 37 347 347 SER SER I . n I 1 38 GLY 38 348 ? ? ? I . n I 1 39 PRO 39 349 ? ? ? I . n I 1 40 SER 40 350 ? ? ? I . n I 1 41 GLY 41 351 ? ? ? I . n I 1 42 ASN 42 352 ? ? ? I . n I 1 43 ASN 43 353 ? ? ? I . n I 1 44 GLN 44 354 ? ? ? I . n I 1 45 ASN 45 355 ? ? ? I . n I 1 46 GLN 46 356 ? ? ? I . n I 1 47 GLY 47 357 ? ? ? I . n I 1 48 ASN 48 358 ? ? ? I . n I 1 49 MET 49 359 ? ? ? I . n I 1 50 GLN 50 360 ? ? ? I . n J 1 1 MET 1 311 ? ? ? J . n J 1 2 ASN 2 312 312 ASN ASN J . n J 1 3 PHE 3 313 313 PHE PHE J . n J 1 4 GLY 4 314 314 GLY GLY J . n J 1 5 ALA 5 315 315 ALA ALA J . n J 1 6 PHE 6 316 316 PHE PHE J . n J 1 7 SER 7 317 317 SER SER J . n J 1 8 ILE 8 318 318 ILE ILE J . n J 1 9 ASN 9 319 319 ASN ASN J . n J 1 10 PRO 10 320 320 PRO PRO J . n J 1 11 ALA 11 321 321 ALA ALA J . n J 1 12 MET 12 322 322 MET MET J . n J 1 13 MET 13 323 323 MET MET J . n J 1 14 ALA 14 324 324 ALA ALA J . n J 1 15 ALA 15 325 325 ALA ALA J . n J 1 16 ALA 16 326 326 ALA ALA J . n J 1 17 GLN 17 327 327 GLN GLN J . n J 1 18 ALA 18 328 328 ALA ALA J . n J 1 19 ALA 19 329 329 ALA ALA J . n J 1 20 LEU 20 330 330 LEU LEU J . n J 1 21 GLN 21 331 331 GLN GLN J . n J 1 22 SER 22 332 332 SER SER J . n J 1 23 SER 23 333 333 SER SER J . n J 1 24 TRP 24 334 334 TRP TRP J . n J 1 25 GLY 25 335 335 GLY GLY J . n J 1 26 MET 26 336 336 MET MET J . n J 1 27 MET 27 337 337 MET MET J . n J 1 28 GLY 28 338 338 GLY GLY J . n J 1 29 MET 29 339 339 MET MET J . n J 1 30 LEU 30 340 340 LEU LEU J . n J 1 31 ALA 31 341 341 ALA ALA J . n J 1 32 SER 32 342 342 SER SER J . n J 1 33 GLN 33 343 343 GLN GLN J . n J 1 34 GLN 34 344 344 GLN GLN J . n J 1 35 ASN 35 345 345 ASN ASN J . n J 1 36 GLN 36 346 346 GLN GLN J . n J 1 37 SER 37 347 347 SER SER J . n J 1 38 GLY 38 348 ? ? ? J . n J 1 39 PRO 39 349 ? ? ? J . n J 1 40 SER 40 350 ? ? ? J . n J 1 41 GLY 41 351 ? ? ? J . n J 1 42 ASN 42 352 ? ? ? J . n J 1 43 ASN 43 353 ? ? ? J . n J 1 44 GLN 44 354 ? ? ? J . n J 1 45 ASN 45 355 ? ? ? J . n J 1 46 GLN 46 356 ? ? ? J . n J 1 47 GLY 47 357 ? ? ? J . n J 1 48 ASN 48 358 ? ? ? J . n J 1 49 MET 49 359 ? ? ? J . n J 1 50 GLN 50 360 ? ? ? J . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6N37 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1 _cell.length_a_esd ? _cell.length_b 1 _cell.length_b_esd ? _cell.length_c 1 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 1 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N37 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6N37 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 6N37 _struct.title 'SegA-sym, conformation of TDP-43 low complexity domain segment A sym' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6N37 _struct_keywords.text 'Amyloid, TDP43, ALS, FTLD-TDP, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 1 ? J N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TADBP_HUMAN _struct_ref.pdbx_db_accession Q13148 _struct_ref.pdbx_db_isoform Q13148-4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQNQGNMQ _struct_ref.pdbx_align_begin 195 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6N37 A 1 ? 50 ? Q13148 195 ? 244 ? 311 360 2 1 6N37 B 1 ? 50 ? Q13148 195 ? 244 ? 311 360 3 1 6N37 C 1 ? 50 ? Q13148 195 ? 244 ? 311 360 4 1 6N37 D 1 ? 50 ? Q13148 195 ? 244 ? 311 360 5 1 6N37 E 1 ? 50 ? Q13148 195 ? 244 ? 311 360 6 1 6N37 F 1 ? 50 ? Q13148 195 ? 244 ? 311 360 7 1 6N37 G 1 ? 50 ? Q13148 195 ? 244 ? 311 360 8 1 6N37 H 1 ? 50 ? Q13148 195 ? 244 ? 311 360 9 1 6N37 I 1 ? 50 ? Q13148 195 ? 244 ? 311 360 10 1 6N37 J 1 ? 50 ? Q13148 195 ? 244 ? 311 360 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details decameric _pdbx_struct_assembly.oligomeric_count 10 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support microscopy _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 5 ? AA3 ? 5 ? AA4 ? 5 ? AA5 ? 5 ? AA6 ? 5 ? AA7 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA3 1 2 ? parallel AA3 2 3 ? parallel AA3 3 4 ? parallel AA3 4 5 ? parallel AA4 1 2 ? parallel AA4 2 3 ? parallel AA4 3 4 ? parallel AA4 4 5 ? parallel AA5 1 2 ? parallel AA5 2 3 ? parallel AA5 3 4 ? parallel AA5 4 5 ? parallel AA6 1 2 ? parallel AA6 2 3 ? parallel AA6 3 4 ? parallel AA6 4 5 ? parallel AA7 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 MET A 13 ? ALA A 14 ? MET A 323 ALA A 324 AA1 2 MET E 13 ? ALA E 14 ? MET E 323 ALA E 324 AA1 3 MET I 13 ? ALA I 14 ? MET I 323 ALA I 324 AA2 1 GLY H 25 ? SER H 32 ? GLY H 335 SER H 342 AA2 2 TRP D 24 ? SER D 32 ? TRP D 334 SER D 342 AA2 3 TRP A 24 ? GLN A 36 ? TRP A 334 GLN A 346 AA2 4 GLY E 25 ? GLN E 36 ? GLY E 335 GLN E 346 AA2 5 GLY I 25 ? SER I 32 ? GLY I 335 SER I 342 AA3 1 ASN H 35 ? GLN H 36 ? ASN H 345 GLN H 346 AA3 2 ASN D 35 ? GLN D 36 ? ASN D 345 GLN D 346 AA3 3 TRP A 24 ? GLN A 36 ? TRP A 334 GLN A 346 AA3 4 GLY E 25 ? GLN E 36 ? GLY E 335 GLN E 346 AA3 5 ASN I 35 ? GLN I 36 ? ASN I 345 GLN I 346 AA4 1 MET G 13 ? ALA G 14 ? MET G 323 ALA G 324 AA4 2 MET C 13 ? ALA C 14 ? MET C 323 ALA C 324 AA4 3 MET B 13 ? ALA B 14 ? MET B 323 ALA B 324 AA4 4 MET F 13 ? ALA F 14 ? MET F 323 ALA F 324 AA4 5 MET J 13 ? ALA J 14 ? MET J 323 ALA J 324 AA5 1 GLY G 25 ? SER G 32 ? GLY G 335 SER G 342 AA5 2 GLY C 25 ? SER C 32 ? GLY C 335 SER C 342 AA5 3 GLY B 25 ? SER B 32 ? GLY B 335 SER B 342 AA5 4 GLY F 25 ? SER F 32 ? GLY F 335 SER F 342 AA5 5 GLY J 25 ? SER J 32 ? GLY J 335 SER J 342 AA6 1 ASN G 35 ? GLN G 36 ? ASN G 345 GLN G 346 AA6 2 ASN C 35 ? GLN C 36 ? ASN C 345 GLN C 346 AA6 3 ASN B 35 ? GLN B 36 ? ASN B 345 GLN B 346 AA6 4 ASN F 35 ? GLN F 36 ? ASN F 345 GLN F 346 AA6 5 ASN J 35 ? GLN J 36 ? ASN J 345 GLN J 346 AA7 1 MET D 13 ? ALA D 14 ? MET D 323 ALA D 324 AA7 2 MET H 13 ? ALA H 14 ? MET H 323 ALA H 324 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N MET A 13 ? N MET A 323 O ALA E 14 ? O ALA E 324 AA1 2 3 N MET E 13 ? N MET E 323 O ALA I 14 ? O ALA I 324 AA2 1 2 O LEU H 30 ? O LEU H 340 N MET D 29 ? N MET D 339 AA2 2 3 O GLY D 25 ? O GLY D 335 N MET A 26 ? N MET A 336 AA2 3 4 N LEU A 30 ? N LEU A 340 O MET E 29 ? O MET E 339 AA2 4 5 N LEU E 30 ? N LEU E 340 O MET I 29 ? O MET I 339 AA3 1 2 O GLN H 36 ? O GLN H 346 N ASN D 35 ? N ASN D 345 AA3 2 3 O GLN D 36 ? O GLN D 346 N ASN A 35 ? N ASN A 345 AA3 3 4 N LEU A 30 ? N LEU A 340 O MET E 29 ? O MET E 339 AA3 4 5 N GLN E 34 ? N GLN E 344 O ASN I 35 ? O ASN I 345 AA4 1 2 O ALA G 14 ? O ALA G 324 N MET C 13 ? N MET C 323 AA4 2 3 O ALA C 14 ? O ALA C 324 N MET B 13 ? N MET B 323 AA4 3 4 N ALA B 14 ? N ALA B 324 O MET F 13 ? O MET F 323 AA4 4 5 N ALA F 14 ? N ALA F 324 O MET J 13 ? O MET J 323 AA5 1 2 O MET G 29 ? O MET G 339 N LEU C 30 ? N LEU C 340 AA5 2 3 O MET C 29 ? O MET C 339 N LEU B 30 ? N LEU B 340 AA5 3 4 N MET B 29 ? N MET B 339 O LEU F 30 ? O LEU F 340 AA5 4 5 N MET F 29 ? N MET F 339 O LEU J 30 ? O LEU J 340 AA6 1 2 O ASN G 35 ? O ASN G 345 N GLN C 36 ? N GLN C 346 AA6 2 3 O ASN C 35 ? O ASN C 345 N GLN B 36 ? N GLN B 346 AA6 3 4 N ASN B 35 ? N ASN B 345 O GLN F 36 ? O GLN F 346 AA6 4 5 N ASN F 35 ? N ASN F 345 O GLN J 36 ? O GLN J 346 AA7 1 2 N ALA D 14 ? N ALA D 324 O MET H 13 ? O MET H 323 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 315 ? ? -171.03 121.27 2 1 ASN A 319 ? ? -153.91 83.86 3 1 MET A 322 ? ? -161.70 115.34 4 1 ALA B 315 ? ? -171.00 121.28 5 1 ASN B 319 ? ? -153.85 83.81 6 1 MET B 322 ? ? -161.68 115.35 7 1 ALA C 315 ? ? -171.01 121.25 8 1 ASN C 319 ? ? -153.94 83.90 9 1 MET C 322 ? ? -161.71 115.32 10 1 ALA D 315 ? ? -170.98 121.28 11 1 ASN D 319 ? ? -153.92 83.83 12 1 MET D 322 ? ? -161.70 115.36 13 1 ALA E 315 ? ? -171.03 121.27 14 1 ASN E 319 ? ? -153.90 83.84 15 1 MET E 322 ? ? -161.67 115.35 16 1 ALA F 315 ? ? -171.05 121.24 17 1 ASN F 319 ? ? -153.95 83.90 18 1 MET F 322 ? ? -161.69 115.36 19 1 ALA G 315 ? ? -171.05 121.23 20 1 ASN G 319 ? ? -153.89 83.89 21 1 MET G 322 ? ? -161.70 115.32 22 1 ALA H 315 ? ? -170.96 121.24 23 1 ASN H 319 ? ? -153.88 83.88 24 1 MET H 322 ? ? -161.68 115.34 25 1 ALA I 315 ? ? -171.09 121.22 26 1 ASN I 319 ? ? -153.92 83.88 27 1 MET I 322 ? ? -161.71 115.36 28 1 ALA J 315 ? ? -171.05 121.32 29 1 ASN J 319 ? ? -153.87 83.83 30 1 MET J 322 ? ? -161.74 115.35 # _em_3d_fitting.entry_id 6N37 _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol 'AB INITIO MODEL' _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 6N37 _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 8033 _em_3d_reconstruction.resolution 3.8 _em_3d_reconstruction.resolution_method 'FSC 0.5 CUT-OFF' _em_3d_reconstruction.symmetry_type HELICAL _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.euler_angles_details ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.4 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'TDP43 fibril' _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type 'ORGANELLE OR CELLULAR COMPONENT' _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_imaging.id 1 _em_imaging.entry_id 6N37 _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter 50 _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_max 2.0 _em_imaging.nominal_defocus_min 2.0 _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.citation_id ? _em_sample_support.details . _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? _em_sample_support.id 1 _em_sample_support.method ? _em_sample_support.specimen_id 1 # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.entry_id 6N37 _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 6N37 _em_experiment.id 1 _em_experiment.aggregation_state FILAMENT _em_experiment.reconstruction_method HELICAL _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 311 ? A MET 1 2 1 Y 1 A GLY 348 ? A GLY 38 3 1 Y 1 A PRO 349 ? A PRO 39 4 1 Y 1 A SER 350 ? A SER 40 5 1 Y 1 A GLY 351 ? A GLY 41 6 1 Y 1 A ASN 352 ? A ASN 42 7 1 Y 1 A ASN 353 ? A ASN 43 8 1 Y 1 A GLN 354 ? A GLN 44 9 1 Y 1 A ASN 355 ? A ASN 45 10 1 Y 1 A GLN 356 ? A GLN 46 11 1 Y 1 A GLY 357 ? A GLY 47 12 1 Y 1 A ASN 358 ? A ASN 48 13 1 Y 1 A MET 359 ? A MET 49 14 1 Y 1 A GLN 360 ? A GLN 50 15 1 Y 1 B MET 311 ? B MET 1 16 1 Y 1 B GLY 348 ? B GLY 38 17 1 Y 1 B PRO 349 ? B PRO 39 18 1 Y 1 B SER 350 ? B SER 40 19 1 Y 1 B GLY 351 ? B GLY 41 20 1 Y 1 B ASN 352 ? B ASN 42 21 1 Y 1 B ASN 353 ? B ASN 43 22 1 Y 1 B GLN 354 ? B GLN 44 23 1 Y 1 B ASN 355 ? B ASN 45 24 1 Y 1 B GLN 356 ? B GLN 46 25 1 Y 1 B GLY 357 ? B GLY 47 26 1 Y 1 B ASN 358 ? B ASN 48 27 1 Y 1 B MET 359 ? B MET 49 28 1 Y 1 B GLN 360 ? B GLN 50 29 1 Y 1 C MET 311 ? C MET 1 30 1 Y 1 C GLY 348 ? C GLY 38 31 1 Y 1 C PRO 349 ? C PRO 39 32 1 Y 1 C SER 350 ? C SER 40 33 1 Y 1 C GLY 351 ? C GLY 41 34 1 Y 1 C ASN 352 ? C ASN 42 35 1 Y 1 C ASN 353 ? C ASN 43 36 1 Y 1 C GLN 354 ? C GLN 44 37 1 Y 1 C ASN 355 ? C ASN 45 38 1 Y 1 C GLN 356 ? C GLN 46 39 1 Y 1 C GLY 357 ? C GLY 47 40 1 Y 1 C ASN 358 ? C ASN 48 41 1 Y 1 C MET 359 ? C MET 49 42 1 Y 1 C GLN 360 ? C GLN 50 43 1 Y 1 D MET 311 ? D MET 1 44 1 Y 1 D GLY 348 ? D GLY 38 45 1 Y 1 D PRO 349 ? D PRO 39 46 1 Y 1 D SER 350 ? D SER 40 47 1 Y 1 D GLY 351 ? D GLY 41 48 1 Y 1 D ASN 352 ? D ASN 42 49 1 Y 1 D ASN 353 ? D ASN 43 50 1 Y 1 D GLN 354 ? D GLN 44 51 1 Y 1 D ASN 355 ? D ASN 45 52 1 Y 1 D GLN 356 ? D GLN 46 53 1 Y 1 D GLY 357 ? D GLY 47 54 1 Y 1 D ASN 358 ? D ASN 48 55 1 Y 1 D MET 359 ? D MET 49 56 1 Y 1 D GLN 360 ? D GLN 50 57 1 Y 1 E MET 311 ? E MET 1 58 1 Y 1 E GLY 348 ? E GLY 38 59 1 Y 1 E PRO 349 ? E PRO 39 60 1 Y 1 E SER 350 ? E SER 40 61 1 Y 1 E GLY 351 ? E GLY 41 62 1 Y 1 E ASN 352 ? E ASN 42 63 1 Y 1 E ASN 353 ? E ASN 43 64 1 Y 1 E GLN 354 ? E GLN 44 65 1 Y 1 E ASN 355 ? E ASN 45 66 1 Y 1 E GLN 356 ? E GLN 46 67 1 Y 1 E GLY 357 ? E GLY 47 68 1 Y 1 E ASN 358 ? E ASN 48 69 1 Y 1 E MET 359 ? E MET 49 70 1 Y 1 E GLN 360 ? E GLN 50 71 1 Y 1 F MET 311 ? F MET 1 72 1 Y 1 F GLY 348 ? F GLY 38 73 1 Y 1 F PRO 349 ? F PRO 39 74 1 Y 1 F SER 350 ? F SER 40 75 1 Y 1 F GLY 351 ? F GLY 41 76 1 Y 1 F ASN 352 ? F ASN 42 77 1 Y 1 F ASN 353 ? F ASN 43 78 1 Y 1 F GLN 354 ? F GLN 44 79 1 Y 1 F ASN 355 ? F ASN 45 80 1 Y 1 F GLN 356 ? F GLN 46 81 1 Y 1 F GLY 357 ? F GLY 47 82 1 Y 1 F ASN 358 ? F ASN 48 83 1 Y 1 F MET 359 ? F MET 49 84 1 Y 1 F GLN 360 ? F GLN 50 85 1 Y 1 G MET 311 ? G MET 1 86 1 Y 1 G GLY 348 ? G GLY 38 87 1 Y 1 G PRO 349 ? G PRO 39 88 1 Y 1 G SER 350 ? G SER 40 89 1 Y 1 G GLY 351 ? G GLY 41 90 1 Y 1 G ASN 352 ? G ASN 42 91 1 Y 1 G ASN 353 ? G ASN 43 92 1 Y 1 G GLN 354 ? G GLN 44 93 1 Y 1 G ASN 355 ? G ASN 45 94 1 Y 1 G GLN 356 ? G GLN 46 95 1 Y 1 G GLY 357 ? G GLY 47 96 1 Y 1 G ASN 358 ? G ASN 48 97 1 Y 1 G MET 359 ? G MET 49 98 1 Y 1 G GLN 360 ? G GLN 50 99 1 Y 1 H MET 311 ? H MET 1 100 1 Y 1 H GLY 348 ? H GLY 38 101 1 Y 1 H PRO 349 ? H PRO 39 102 1 Y 1 H SER 350 ? H SER 40 103 1 Y 1 H GLY 351 ? H GLY 41 104 1 Y 1 H ASN 352 ? H ASN 42 105 1 Y 1 H ASN 353 ? H ASN 43 106 1 Y 1 H GLN 354 ? H GLN 44 107 1 Y 1 H ASN 355 ? H ASN 45 108 1 Y 1 H GLN 356 ? H GLN 46 109 1 Y 1 H GLY 357 ? H GLY 47 110 1 Y 1 H ASN 358 ? H ASN 48 111 1 Y 1 H MET 359 ? H MET 49 112 1 Y 1 H GLN 360 ? H GLN 50 113 1 Y 1 I MET 311 ? I MET 1 114 1 Y 1 I GLY 348 ? I GLY 38 115 1 Y 1 I PRO 349 ? I PRO 39 116 1 Y 1 I SER 350 ? I SER 40 117 1 Y 1 I GLY 351 ? I GLY 41 118 1 Y 1 I ASN 352 ? I ASN 42 119 1 Y 1 I ASN 353 ? I ASN 43 120 1 Y 1 I GLN 354 ? I GLN 44 121 1 Y 1 I ASN 355 ? I ASN 45 122 1 Y 1 I GLN 356 ? I GLN 46 123 1 Y 1 I GLY 357 ? I GLY 47 124 1 Y 1 I ASN 358 ? I ASN 48 125 1 Y 1 I MET 359 ? I MET 49 126 1 Y 1 I GLN 360 ? I GLN 50 127 1 Y 1 J MET 311 ? J MET 1 128 1 Y 1 J GLY 348 ? J GLY 38 129 1 Y 1 J PRO 349 ? J PRO 39 130 1 Y 1 J SER 350 ? J SER 40 131 1 Y 1 J GLY 351 ? J GLY 41 132 1 Y 1 J ASN 352 ? J ASN 42 133 1 Y 1 J ASN 353 ? J ASN 43 134 1 Y 1 J GLN 354 ? J GLN 44 135 1 Y 1 J ASN 355 ? J ASN 45 136 1 Y 1 J GLN 356 ? J GLN 46 137 1 Y 1 J GLY 357 ? J GLY 47 138 1 Y 1 J ASN 358 ? J ASN 48 139 1 Y 1 J MET 359 ? J MET 49 140 1 Y 1 J GLN 360 ? J GLN 50 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASN N N N N 14 ASN CA C N S 15 ASN C C N N 16 ASN O O N N 17 ASN CB C N N 18 ASN CG C N N 19 ASN OD1 O N N 20 ASN ND2 N N N 21 ASN OXT O N N 22 ASN H H N N 23 ASN H2 H N N 24 ASN HA H N N 25 ASN HB2 H N N 26 ASN HB3 H N N 27 ASN HD21 H N N 28 ASN HD22 H N N 29 ASN HXT H N N 30 GLN N N N N 31 GLN CA C N S 32 GLN C C N N 33 GLN O O N N 34 GLN CB C N N 35 GLN CG C N N 36 GLN CD C N N 37 GLN OE1 O N N 38 GLN NE2 N N N 39 GLN OXT O N N 40 GLN H H N N 41 GLN H2 H N N 42 GLN HA H N N 43 GLN HB2 H N N 44 GLN HB3 H N N 45 GLN HG2 H N N 46 GLN HG3 H N N 47 GLN HE21 H N N 48 GLN HE22 H N N 49 GLN HXT H N N 50 GLY N N N N 51 GLY CA C N N 52 GLY C C N N 53 GLY O O N N 54 GLY OXT O N N 55 GLY H H N N 56 GLY H2 H N N 57 GLY HA2 H N N 58 GLY HA3 H N N 59 GLY HXT H N N 60 ILE N N N N 61 ILE CA C N S 62 ILE C C N N 63 ILE O O N N 64 ILE CB C N S 65 ILE CG1 C N N 66 ILE CG2 C N N 67 ILE CD1 C N N 68 ILE OXT O N N 69 ILE H H N N 70 ILE H2 H N N 71 ILE HA H N N 72 ILE HB H N N 73 ILE HG12 H N N 74 ILE HG13 H N N 75 ILE HG21 H N N 76 ILE HG22 H N N 77 ILE HG23 H N N 78 ILE HD11 H N N 79 ILE HD12 H N N 80 ILE HD13 H N N 81 ILE HXT H N N 82 LEU N N N N 83 LEU CA C N S 84 LEU C C N N 85 LEU O O N N 86 LEU CB C N N 87 LEU CG C N N 88 LEU CD1 C N N 89 LEU CD2 C N N 90 LEU OXT O N N 91 LEU H H N N 92 LEU H2 H N N 93 LEU HA H N N 94 LEU HB2 H N N 95 LEU HB3 H N N 96 LEU HG H N N 97 LEU HD11 H N N 98 LEU HD12 H N N 99 LEU HD13 H N N 100 LEU HD21 H N N 101 LEU HD22 H N N 102 LEU HD23 H N N 103 LEU HXT H N N 104 MET N N N N 105 MET CA C N S 106 MET C C N N 107 MET O O N N 108 MET CB C N N 109 MET CG C N N 110 MET SD S N N 111 MET CE C N N 112 MET OXT O N N 113 MET H H N N 114 MET H2 H N N 115 MET HA H N N 116 MET HB2 H N N 117 MET HB3 H N N 118 MET HG2 H N N 119 MET HG3 H N N 120 MET HE1 H N N 121 MET HE2 H N N 122 MET HE3 H N N 123 MET HXT H N N 124 PHE N N N N 125 PHE CA C N S 126 PHE C C N N 127 PHE O O N N 128 PHE CB C N N 129 PHE CG C Y N 130 PHE CD1 C Y N 131 PHE CD2 C Y N 132 PHE CE1 C Y N 133 PHE CE2 C Y N 134 PHE CZ C Y N 135 PHE OXT O N N 136 PHE H H N N 137 PHE H2 H N N 138 PHE HA H N N 139 PHE HB2 H N N 140 PHE HB3 H N N 141 PHE HD1 H N N 142 PHE HD2 H N N 143 PHE HE1 H N N 144 PHE HE2 H N N 145 PHE HZ H N N 146 PHE HXT H N N 147 PRO N N N N 148 PRO CA C N S 149 PRO C C N N 150 PRO O O N N 151 PRO CB C N N 152 PRO CG C N N 153 PRO CD C N N 154 PRO OXT O N N 155 PRO H H N N 156 PRO HA H N N 157 PRO HB2 H N N 158 PRO HB3 H N N 159 PRO HG2 H N N 160 PRO HG3 H N N 161 PRO HD2 H N N 162 PRO HD3 H N N 163 PRO HXT H N N 164 SER N N N N 165 SER CA C N S 166 SER C C N N 167 SER O O N N 168 SER CB C N N 169 SER OG O N N 170 SER OXT O N N 171 SER H H N N 172 SER H2 H N N 173 SER HA H N N 174 SER HB2 H N N 175 SER HB3 H N N 176 SER HG H N N 177 SER HXT H N N 178 TRP N N N N 179 TRP CA C N S 180 TRP C C N N 181 TRP O O N N 182 TRP CB C N N 183 TRP CG C Y N 184 TRP CD1 C Y N 185 TRP CD2 C Y N 186 TRP NE1 N Y N 187 TRP CE2 C Y N 188 TRP CE3 C Y N 189 TRP CZ2 C Y N 190 TRP CZ3 C Y N 191 TRP CH2 C Y N 192 TRP OXT O N N 193 TRP H H N N 194 TRP H2 H N N 195 TRP HA H N N 196 TRP HB2 H N N 197 TRP HB3 H N N 198 TRP HD1 H N N 199 TRP HE1 H N N 200 TRP HE3 H N N 201 TRP HZ2 H N N 202 TRP HZ3 H N N 203 TRP HH2 H N N 204 TRP HXT H N N 205 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASN N CA sing N N 13 ASN N H sing N N 14 ASN N H2 sing N N 15 ASN CA C sing N N 16 ASN CA CB sing N N 17 ASN CA HA sing N N 18 ASN C O doub N N 19 ASN C OXT sing N N 20 ASN CB CG sing N N 21 ASN CB HB2 sing N N 22 ASN CB HB3 sing N N 23 ASN CG OD1 doub N N 24 ASN CG ND2 sing N N 25 ASN ND2 HD21 sing N N 26 ASN ND2 HD22 sing N N 27 ASN OXT HXT sing N N 28 GLN N CA sing N N 29 GLN N H sing N N 30 GLN N H2 sing N N 31 GLN CA C sing N N 32 GLN CA CB sing N N 33 GLN CA HA sing N N 34 GLN C O doub N N 35 GLN C OXT sing N N 36 GLN CB CG sing N N 37 GLN CB HB2 sing N N 38 GLN CB HB3 sing N N 39 GLN CG CD sing N N 40 GLN CG HG2 sing N N 41 GLN CG HG3 sing N N 42 GLN CD OE1 doub N N 43 GLN CD NE2 sing N N 44 GLN NE2 HE21 sing N N 45 GLN NE2 HE22 sing N N 46 GLN OXT HXT sing N N 47 GLY N CA sing N N 48 GLY N H sing N N 49 GLY N H2 sing N N 50 GLY CA C sing N N 51 GLY CA HA2 sing N N 52 GLY CA HA3 sing N N 53 GLY C O doub N N 54 GLY C OXT sing N N 55 GLY OXT HXT sing N N 56 ILE N CA sing N N 57 ILE N H sing N N 58 ILE N H2 sing N N 59 ILE CA C sing N N 60 ILE CA CB sing N N 61 ILE CA HA sing N N 62 ILE C O doub N N 63 ILE C OXT sing N N 64 ILE CB CG1 sing N N 65 ILE CB CG2 sing N N 66 ILE CB HB sing N N 67 ILE CG1 CD1 sing N N 68 ILE CG1 HG12 sing N N 69 ILE CG1 HG13 sing N N 70 ILE CG2 HG21 sing N N 71 ILE CG2 HG22 sing N N 72 ILE CG2 HG23 sing N N 73 ILE CD1 HD11 sing N N 74 ILE CD1 HD12 sing N N 75 ILE CD1 HD13 sing N N 76 ILE OXT HXT sing N N 77 LEU N CA sing N N 78 LEU N H sing N N 79 LEU N H2 sing N N 80 LEU CA C sing N N 81 LEU CA CB sing N N 82 LEU CA HA sing N N 83 LEU C O doub N N 84 LEU C OXT sing N N 85 LEU CB CG sing N N 86 LEU CB HB2 sing N N 87 LEU CB HB3 sing N N 88 LEU CG CD1 sing N N 89 LEU CG CD2 sing N N 90 LEU CG HG sing N N 91 LEU CD1 HD11 sing N N 92 LEU CD1 HD12 sing N N 93 LEU CD1 HD13 sing N N 94 LEU CD2 HD21 sing N N 95 LEU CD2 HD22 sing N N 96 LEU CD2 HD23 sing N N 97 LEU OXT HXT sing N N 98 MET N CA sing N N 99 MET N H sing N N 100 MET N H2 sing N N 101 MET CA C sing N N 102 MET CA CB sing N N 103 MET CA HA sing N N 104 MET C O doub N N 105 MET C OXT sing N N 106 MET CB CG sing N N 107 MET CB HB2 sing N N 108 MET CB HB3 sing N N 109 MET CG SD sing N N 110 MET CG HG2 sing N N 111 MET CG HG3 sing N N 112 MET SD CE sing N N 113 MET CE HE1 sing N N 114 MET CE HE2 sing N N 115 MET CE HE3 sing N N 116 MET OXT HXT sing N N 117 PHE N CA sing N N 118 PHE N H sing N N 119 PHE N H2 sing N N 120 PHE CA C sing N N 121 PHE CA CB sing N N 122 PHE CA HA sing N N 123 PHE C O doub N N 124 PHE C OXT sing N N 125 PHE CB CG sing N N 126 PHE CB HB2 sing N N 127 PHE CB HB3 sing N N 128 PHE CG CD1 doub Y N 129 PHE CG CD2 sing Y N 130 PHE CD1 CE1 sing Y N 131 PHE CD1 HD1 sing N N 132 PHE CD2 CE2 doub Y N 133 PHE CD2 HD2 sing N N 134 PHE CE1 CZ doub Y N 135 PHE CE1 HE1 sing N N 136 PHE CE2 CZ sing Y N 137 PHE CE2 HE2 sing N N 138 PHE CZ HZ sing N N 139 PHE OXT HXT sing N N 140 PRO N CA sing N N 141 PRO N CD sing N N 142 PRO N H sing N N 143 PRO CA C sing N N 144 PRO CA CB sing N N 145 PRO CA HA sing N N 146 PRO C O doub N N 147 PRO C OXT sing N N 148 PRO CB CG sing N N 149 PRO CB HB2 sing N N 150 PRO CB HB3 sing N N 151 PRO CG CD sing N N 152 PRO CG HG2 sing N N 153 PRO CG HG3 sing N N 154 PRO CD HD2 sing N N 155 PRO CD HD3 sing N N 156 PRO OXT HXT sing N N 157 SER N CA sing N N 158 SER N H sing N N 159 SER N H2 sing N N 160 SER CA C sing N N 161 SER CA CB sing N N 162 SER CA HA sing N N 163 SER C O doub N N 164 SER C OXT sing N N 165 SER CB OG sing N N 166 SER CB HB2 sing N N 167 SER CB HB3 sing N N 168 SER OG HG sing N N 169 SER OXT HXT sing N N 170 TRP N CA sing N N 171 TRP N H sing N N 172 TRP N H2 sing N N 173 TRP CA C sing N N 174 TRP CA CB sing N N 175 TRP CA HA sing N N 176 TRP C O doub N N 177 TRP C OXT sing N N 178 TRP CB CG sing N N 179 TRP CB HB2 sing N N 180 TRP CB HB3 sing N N 181 TRP CG CD1 doub Y N 182 TRP CG CD2 sing Y N 183 TRP CD1 NE1 sing Y N 184 TRP CD1 HD1 sing N N 185 TRP CD2 CE2 doub Y N 186 TRP CD2 CE3 sing Y N 187 TRP NE1 CE2 sing Y N 188 TRP NE1 HE1 sing N N 189 TRP CE2 CZ2 sing Y N 190 TRP CE3 CZ3 doub Y N 191 TRP CE3 HE3 sing N N 192 TRP CZ2 CH2 doub Y N 193 TRP CZ2 HZ2 sing N N 194 TRP CZ3 CH2 sing Y N 195 TRP CZ3 HZ3 sing N N 196 TRP CH2 HH2 sing N N 197 TRP OXT HXT sing N N 198 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.angular_rotation_per_subunit 178.61 _em_helical_entity.axial_rise_per_subunit 2.38 _em_helical_entity.axial_symmetry C1 _em_helical_entity.details ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 56 _em_image_recording.average_exposure_time 8 _em_image_recording.details ? _em_image_recording.detector_mode SUPER-RESOLUTION _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_name ? _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.energyfilter_slit_width ? _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' e2helixboxer.py EMAN2 ? 1 ? ? 2 'IMAGE ACQUISITION' ? Leginon 3 ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? CTFFIND 4.1.8 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ? ? ? 1 ? 8 OTHER ? ? ? ? ? ? 9 'INITIAL EULER ASSIGNMENT' ? RELION 2 1 ? ? 10 'FINAL EULER ASSIGNMENT' ? RELION 2 1 ? ? 11 CLASSIFICATION ? ? ? 1 ? ? 12 RECONSTRUCTION ? RELION 2 1 ? ? 13 'MODEL REFINEMENT' ? PHENIX real_space_refine ? 1 ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute on Aging (NIH/NIA)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number AG0543022 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 6N37 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_