HEADER VIRAL PROTEIN 16-NOV-18 6N3U TITLE MICROED STRUCTURE OF THE CTD-SP1 FRAGMENT OF HIV-1 GAG WITH BOUND TITLE 2 MATURATION INHIBITOR BEVIRIMAT. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CTD-SP1 FRAGMENT OF HIV-1 GAG; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 FRAGMENT: CTD-SP1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 3 ORGANISM_TAXID: 11676; SOURCE 4 GENE: GAG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET30A KEYWDS BEVIRIMAT, HIV-1 GAG, MICROED, IMMATURE HEXAGONAL LATTICE, VIRAL KEYWDS 2 PROTEIN EXPDTA ELECTRON CRYSTALLOGRAPHY AUTHOR M.D.PURDY,D.SHI,J.HATTNE,J.CHRUSTOWICZ REVDAT 6 25-OCT-23 6N3U 1 REMARK REVDAT 5 20-NOV-19 6N3U 1 REMARK REVDAT 4 09-JAN-19 6N3U 1 JRNL REVDAT 3 26-DEC-18 6N3U 1 JRNL REMARK REVDAT 2 19-DEC-18 6N3U 1 JRNL REVDAT 1 12-DEC-18 6N3U 0 JRNL AUTH M.D.PURDY,D.SHI,J.CHRUSTOWICZ,J.HATTNE,T.GONEN,M.YEAGER JRNL TITL MICROED STRUCTURES OF HIV-1 GAG CTD-SP1 REVEAL BINDING JRNL TITL 2 INTERACTIONS WITH THE MATURATION INHIBITOR BEVIRIMAT. JRNL REF PROC. NATL. ACAD. SCI. V. 115 13258 2018 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 30530702 JRNL DOI 10.1073/PNAS.1806806115 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_2747 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 83.1 REMARK 3 NUMBER OF REFLECTIONS : 11635 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.240 REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.170 REMARK 3 FREE R VALUE TEST SET COUNT : 1317 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9460 - 5.9839 0.82 1303 151 0.2010 0.2213 REMARK 3 2 5.9839 - 4.7710 0.83 1311 125 0.1964 0.2152 REMARK 3 3 4.7710 - 4.1742 0.83 1309 138 0.1767 0.2387 REMARK 3 4 4.1742 - 3.7954 0.84 1291 161 0.2145 0.3175 REMARK 3 5 3.7954 - 3.5250 0.83 1256 175 0.2518 0.3115 REMARK 3 6 3.5250 - 3.3181 0.84 1336 123 0.2947 0.3121 REMARK 3 7 3.3181 - 3.1526 0.83 1290 136 0.3189 0.3522 REMARK 3 8 3.1526 - 3.0159 0.83 1276 158 0.3430 0.4023 REMARK 3 9 3.0159 - 2.9001 0.82 1262 150 0.3544 0.3394 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.490 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.000 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4033 REMARK 3 ANGLE : 0.474 5471 REMARK 3 CHIRALITY : 0.034 641 REMARK 3 PLANARITY : 0.003 706 REMARK 3 DIHEDRAL : 10.686 2464 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 17.9835 -2.5007 20.4561 REMARK 3 T TENSOR REMARK 3 T11: 0.2300 T22: 0.2563 REMARK 3 T33: 0.1764 T12: -0.0113 REMARK 3 T13: 0.0208 T23: -0.0172 REMARK 3 L TENSOR REMARK 3 L11: 0.9831 L22: 1.6741 REMARK 3 L33: 0.8191 L12: 0.4568 REMARK 3 L13: 0.1033 L23: 0.0467 REMARK 3 S TENSOR REMARK 3 S11: 0.0279 S12: 0.0615 S13: 0.0692 REMARK 3 S21: -0.1858 S22: 0.0374 S23: 0.0500 REMARK 3 S31: -0.0166 S32: 0.0254 S33: -0.0606 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 3 X-RAY DATA. REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : NULL REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 17.9835 -2.5007 20.4561 REMARK 3 T TENSOR REMARK 3 T11: 0.2300 T22: 0.2563 REMARK 3 T33: 0.1764 T12: -0.0113 REMARK 3 T13: 0.0208 T23: -0.0172 REMARK 3 L TENSOR REMARK 3 L11: 0.9831 L22: 1.6741 REMARK 3 L33: 0.8191 L12: 0.4568 REMARK 3 L13: 0.1033 L23: 0.0467 REMARK 3 S TENSOR REMARK 3 S11: 0.0279 S12: 0.0615 S13: 0.0692 REMARK 3 S21: -0.1858 S22: 0.0374 S23: 0.0500 REMARK 3 S31: -0.0166 S32: 0.0254 S33: -0.0606 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6N3U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1000238121. REMARK 240 REMARK 240 EXPERIMENTAL DETAILS REMARK 240 RECONSTRUCTION METHOD : CRYSTALLOGRAPHY REMARK 240 SAMPLE TYPE : 3D ARRAY REMARK 240 SPECIMEN TYPE : NULL REMARK 240 DATA ACQUISITION REMARK 240 DATE OF DATA COLLECTION : NULL REMARK 240 TEMPERATURE (KELVIN) : NULL REMARK 240 PH : 7.00 REMARK 240 NUMBER OF CRYSTALS USED : NULL REMARK 240 MICROSCOPE MODEL : FEI TECNAI F20 REMARK 240 DETECTOR TYPE : TVIPS TEMCAM-F416 (4K X 4K) REMARK 240 ACCELERATION VOLTAGE (KV) : 200 REMARK 240 NUMBER OF UNIQUE REFLECTIONS : 12951 REMARK 240 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 240 RESOLUTION RANGE LOW (A) : 27.400 REMARK 240 DATA SCALING SOFTWARE : AIMLESS REMARK 240 COMPLETENESS FOR RANGE (%) : 83.4 REMARK 240 DATA REDUNDANCY : 7.500 REMARK 240 IN THE HIGHEST RESOLUTION SHELL REMARK 240 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) :2.90 REMARK 240 HIGHEST RESOLUTION SHELL, RANGE LOW (A) :3.10 REMARK 240 COMPLETENESS FOR SHELL (%) : 82.3 REMARK 240 DATA REDUNDANCY IN SHELL : 7.50 REMARK 240 R MERGE FOR SHELL (I) : NULL REMARK 240 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 240 SOFTWARE USED : PHASER REMARK 240 STARTING MODEL : NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 35.67800 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 61.49150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 35.67800 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 61.49150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 268 REMARK 465 MET A 269 REMARK 465 HIS A 270 REMARK 465 HIS A 271 REMARK 465 HIS A 272 REMARK 465 HIS A 273 REMARK 465 HIS A 274 REMARK 465 HIS A 275 REMARK 465 GLY A 276 REMARK 465 GLY A 277 REMARK 465 SER A 278 REMARK 465 PRO A 279 REMARK 465 THR A 371 REMARK 465 ASN A 372 REMARK 465 THR A 373 REMARK 465 ALA A 374 REMARK 465 THR A 375 REMARK 465 ILE A 376 REMARK 465 MET A 377 REMARK 465 HIS B 268 REMARK 465 MET B 269 REMARK 465 HIS B 270 REMARK 465 HIS B 271 REMARK 465 HIS B 272 REMARK 465 HIS B 273 REMARK 465 HIS B 274 REMARK 465 HIS B 275 REMARK 465 GLY B 276 REMARK 465 GLY B 277 REMARK 465 SER B 278 REMARK 465 THR B 371 REMARK 465 ASN B 372 REMARK 465 THR B 373 REMARK 465 ALA B 374 REMARK 465 THR B 375 REMARK 465 ILE B 376 REMARK 465 MET B 377 REMARK 465 HIS C 268 REMARK 465 MET C 269 REMARK 465 HIS C 270 REMARK 465 HIS C 271 REMARK 465 HIS C 272 REMARK 465 HIS C 273 REMARK 465 HIS C 274 REMARK 465 HIS C 275 REMARK 465 GLY C 276 REMARK 465 GLY C 277 REMARK 465 SER C 278 REMARK 465 PRO C 279 REMARK 465 ASN C 372 REMARK 465 THR C 373 REMARK 465 ALA C 374 REMARK 465 THR C 375 REMARK 465 ILE C 376 REMARK 465 MET C 377 REMARK 465 HIS D 268 REMARK 465 MET D 269 REMARK 465 HIS D 270 REMARK 465 HIS D 271 REMARK 465 HIS D 272 REMARK 465 HIS D 273 REMARK 465 HIS D 274 REMARK 465 HIS D 275 REMARK 465 GLY D 276 REMARK 465 GLY D 277 REMARK 465 SER D 278 REMARK 465 PRO D 279 REMARK 465 THR D 371 REMARK 465 ASN D 372 REMARK 465 THR D 373 REMARK 465 ALA D 374 REMARK 465 THR D 375 REMARK 465 ILE D 376 REMARK 465 MET D 377 REMARK 465 HIS E 268 REMARK 465 MET E 269 REMARK 465 HIS E 270 REMARK 465 HIS E 271 REMARK 465 HIS E 272 REMARK 465 HIS E 273 REMARK 465 HIS E 274 REMARK 465 HIS E 275 REMARK 465 GLY E 276 REMARK 465 GLY E 277 REMARK 465 SER E 278 REMARK 465 PRO E 279 REMARK 465 THR E 371 REMARK 465 ASN E 372 REMARK 465 THR E 373 REMARK 465 ALA E 374 REMARK 465 THR E 375 REMARK 465 ILE E 376 REMARK 465 MET E 377 REMARK 465 HIS F 268 REMARK 465 MET F 269 REMARK 465 HIS F 270 REMARK 465 HIS F 271 REMARK 465 HIS F 272 REMARK 465 HIS F 273 REMARK 465 HIS F 274 REMARK 465 HIS F 275 REMARK 465 GLY F 276 REMARK 465 GLY F 277 REMARK 465 SER F 278 REMARK 465 PRO F 279 REMARK 465 ASN F 372 REMARK 465 THR F 373 REMARK 465 ALA F 374 REMARK 465 THR F 375 REMARK 465 ILE F 376 REMARK 465 MET F 377 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 280 OG1 CG2 REMARK 470 SER A 281 OG REMARK 470 ASP A 284 CG OD1 OD2 REMARK 470 ASP A 298 CG OD1 OD2 REMARK 470 LYS A 302 CG CD CE NZ REMARK 470 ARG A 305 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 308 CG CD OE1 NE2 REMARK 470 GLN A 311 CG CD OE1 NE2 REMARK 470 GLU A 312 CG CD OE1 OE2 REMARK 470 GLU A 319 CG CD OE1 OE2 REMARK 470 ASP A 329 CG OD1 OD2 REMARK 470 GLU A 344 CG CD OE1 OE2 REMARK 470 GLU A 365 CG CD OE1 OE2 REMARK 470 SER A 368 OG REMARK 470 GLN A 369 CG CD OE1 NE2 REMARK 470 VAL A 370 CG1 CG2 REMARK 470 ASP B 298 CG OD1 OD2 REMARK 470 LYS B 302 CG CD CE NZ REMARK 470 GLN B 308 CG CD OE1 NE2 REMARK 470 GLU B 312 CG CD OE1 OE2 REMARK 470 ASP B 329 CG OD1 OD2 REMARK 470 GLU B 344 CG CD OE1 OE2 REMARK 470 GLU B 365 CG CD OE1 OE2 REMARK 470 SER B 368 OG REMARK 470 GLN B 369 CG CD OE1 NE2 REMARK 470 VAL B 370 CG1 CG2 REMARK 470 ASP C 284 CG OD1 OD2 REMARK 470 ASP C 295 CG OD1 OD2 REMARK 470 LYS C 302 CG CD CE NZ REMARK 470 ARG C 305 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 312 CG CD OE1 OE2 REMARK 470 GLN C 324 CG CD OE1 NE2 REMARK 470 ASP C 329 CG OD1 OD2 REMARK 470 GLU C 344 CG CD OE1 OE2 REMARK 470 GLU C 365 CG CD OE1 OE2 REMARK 470 SER C 368 OG REMARK 470 GLN C 369 CG CD OE1 NE2 REMARK 470 VAL C 370 CG1 CG2 REMARK 470 THR C 371 OG1 CG2 REMARK 470 THR D 280 OG1 CG2 REMARK 470 SER D 281 OG REMARK 470 ASP D 284 CG OD1 OD2 REMARK 470 ASP D 298 CG OD1 OD2 REMARK 470 LYS D 302 CG CD CE NZ REMARK 470 GLN D 308 CG CD OE1 NE2 REMARK 470 GLN D 311 CG CD OE1 NE2 REMARK 470 THR D 342 OG1 CG2 REMARK 470 GLU D 344 CG CD OE1 OE2 REMARK 470 GLU D 345 CG CD OE1 OE2 REMARK 470 GLU D 365 CG CD OE1 OE2 REMARK 470 SER D 368 OG REMARK 470 GLN D 369 CG CD OE1 NE2 REMARK 470 THR E 280 OG1 CG2 REMARK 470 SER E 281 OG REMARK 470 ASP E 284 CG OD1 OD2 REMARK 470 ASP E 298 CG OD1 OD2 REMARK 470 LYS E 302 CG CD CE NZ REMARK 470 ARG E 305 CG CD NE CZ NH1 NH2 REMARK 470 GLN E 308 CG CD OE1 NE2 REMARK 470 GLN E 311 CG CD OE1 NE2 REMARK 470 GLU E 312 CG CD OE1 OE2 REMARK 470 GLU E 319 CG CD OE1 OE2 REMARK 470 GLU E 344 CG CD OE1 OE2 REMARK 470 GLU E 365 CG CD OE1 OE2 REMARK 470 SER E 368 OG REMARK 470 GLN E 369 CG CD OE1 NE2 REMARK 470 VAL E 370 CG1 CG2 REMARK 470 THR F 280 OG1 CG2 REMARK 470 SER F 281 OG REMARK 470 ASP F 284 CG OD1 OD2 REMARK 470 ASP F 298 CG OD1 OD2 REMARK 470 ARG F 305 CG CD NE CZ NH1 NH2 REMARK 470 GLN F 308 CG CD OE1 NE2 REMARK 470 SER F 310 OG REMARK 470 GLU F 312 CG CD OE1 OE2 REMARK 470 GLU F 344 CG CD OE1 OE2 REMARK 470 GLU F 365 CG CD OE1 OE2 REMARK 470 SER F 368 OG REMARK 470 GLN F 369 CG CD OE1 NE2 REMARK 470 VAL F 370 CG1 CG2 REMARK 470 THR F 371 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H THR A 342 OE2 GLU A 345 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN C 369 46.58 -86.98 REMARK 500 VAL C 370 -98.13 -167.68 REMARK 500 PRO D 292 156.36 -48.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-0337 RELATED DB: EMDB REMARK 900 MICROED STRUCTURE OF THE CTD-SP1 FRAGMENT OF HIV-1 GAG WITH BOUND REMARK 900 MATURATION INHIBITOR BEVIRIMAT. DBREF1 6N3U A 278 377 UNP A0A248SMC7_9HIV1 DBREF2 6N3U A A0A248SMC7 146 245 DBREF1 6N3U B 278 377 UNP A0A248SMC7_9HIV1 DBREF2 6N3U B A0A248SMC7 146 245 DBREF1 6N3U C 278 377 UNP A0A248SMC7_9HIV1 DBREF2 6N3U C A0A248SMC7 146 245 DBREF1 6N3U D 278 377 UNP A0A248SMC7_9HIV1 DBREF2 6N3U D A0A248SMC7 146 245 DBREF1 6N3U E 278 377 UNP A0A248SMC7_9HIV1 DBREF2 6N3U E A0A248SMC7 146 245 DBREF1 6N3U F 278 377 UNP A0A248SMC7_9HIV1 DBREF2 6N3U F A0A248SMC7 146 245 SEQADV 6N3U HIS A 268 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U MET A 269 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS A 270 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS A 271 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS A 272 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS A 273 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS A 274 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS A 275 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U GLY A 276 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U GLY A 277 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U THR A 373 UNP A0A248SMC PRO 241 ENGINEERED MUTATION SEQADV 6N3U HIS B 268 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U MET B 269 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS B 270 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS B 271 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS B 272 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS B 273 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS B 274 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS B 275 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U GLY B 276 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U GLY B 277 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U THR B 373 UNP A0A248SMC PRO 241 ENGINEERED MUTATION SEQADV 6N3U HIS C 268 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U MET C 269 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS C 270 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS C 271 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS C 272 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS C 273 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS C 274 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS C 275 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U GLY C 276 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U GLY C 277 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U THR C 373 UNP A0A248SMC PRO 241 ENGINEERED MUTATION SEQADV 6N3U HIS D 268 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U MET D 269 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS D 270 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS D 271 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS D 272 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS D 273 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS D 274 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS D 275 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U GLY D 276 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U GLY D 277 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U THR D 373 UNP A0A248SMC PRO 241 ENGINEERED MUTATION SEQADV 6N3U HIS E 268 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U MET E 269 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS E 270 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS E 271 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS E 272 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS E 273 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS E 274 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS E 275 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U GLY E 276 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U GLY E 277 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U THR E 373 UNP A0A248SMC PRO 241 ENGINEERED MUTATION SEQADV 6N3U HIS F 268 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U MET F 269 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS F 270 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS F 271 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS F 272 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS F 273 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS F 274 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U HIS F 275 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U GLY F 276 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U GLY F 277 UNP A0A248SMC EXPRESSION TAG SEQADV 6N3U THR F 373 UNP A0A248SMC PRO 241 ENGINEERED MUTATION SEQRES 1 A 110 HIS MET HIS HIS HIS HIS HIS HIS GLY GLY SER PRO THR SEQRES 2 A 110 SER ILE LEU ASP ILE ARG GLN GLY PRO LYS GLU PRO PHE SEQRES 3 A 110 ARG ASP TYR VAL ASP ARG PHE TYR LYS THR LEU ARG ALA SEQRES 4 A 110 GLU GLN ALA SER GLN GLU VAL LYS ASN TRP MET THR GLU SEQRES 5 A 110 THR LEU LEU VAL GLN ASN ALA ASN PRO ASP CYS LYS THR SEQRES 6 A 110 ILE LEU LYS ALA LEU GLY PRO GLY ALA THR LEU GLU GLU SEQRES 7 A 110 MET MET THR ALA CYS GLN GLY VAL GLY GLY PRO GLY HIS SEQRES 8 A 110 LYS ALA ARG VAL LEU ALA GLU ALA MET SER GLN VAL THR SEQRES 9 A 110 ASN THR ALA THR ILE MET SEQRES 1 B 110 HIS MET HIS HIS HIS HIS HIS HIS GLY GLY SER PRO THR SEQRES 2 B 110 SER ILE LEU ASP ILE ARG GLN GLY PRO LYS GLU PRO PHE SEQRES 3 B 110 ARG ASP TYR VAL ASP ARG PHE TYR LYS THR LEU ARG ALA SEQRES 4 B 110 GLU GLN ALA SER GLN GLU VAL LYS ASN TRP MET THR GLU SEQRES 5 B 110 THR LEU LEU VAL GLN ASN ALA ASN PRO ASP CYS LYS THR SEQRES 6 B 110 ILE LEU LYS ALA LEU GLY PRO GLY ALA THR LEU GLU GLU SEQRES 7 B 110 MET MET THR ALA CYS GLN GLY VAL GLY GLY PRO GLY HIS SEQRES 8 B 110 LYS ALA ARG VAL LEU ALA GLU ALA MET SER GLN VAL THR SEQRES 9 B 110 ASN THR ALA THR ILE MET SEQRES 1 C 110 HIS MET HIS HIS HIS HIS HIS HIS GLY GLY SER PRO THR SEQRES 2 C 110 SER ILE LEU ASP ILE ARG GLN GLY PRO LYS GLU PRO PHE SEQRES 3 C 110 ARG ASP TYR VAL ASP ARG PHE TYR LYS THR LEU ARG ALA SEQRES 4 C 110 GLU GLN ALA SER GLN GLU VAL LYS ASN TRP MET THR GLU SEQRES 5 C 110 THR LEU LEU VAL GLN ASN ALA ASN PRO ASP CYS LYS THR SEQRES 6 C 110 ILE LEU LYS ALA LEU GLY PRO GLY ALA THR LEU GLU GLU SEQRES 7 C 110 MET MET THR ALA CYS GLN GLY VAL GLY GLY PRO GLY HIS SEQRES 8 C 110 LYS ALA ARG VAL LEU ALA GLU ALA MET SER GLN VAL THR SEQRES 9 C 110 ASN THR ALA THR ILE MET SEQRES 1 D 110 HIS MET HIS HIS HIS HIS HIS HIS GLY GLY SER PRO THR SEQRES 2 D 110 SER ILE LEU ASP ILE ARG GLN GLY PRO LYS GLU PRO PHE SEQRES 3 D 110 ARG ASP TYR VAL ASP ARG PHE TYR LYS THR LEU ARG ALA SEQRES 4 D 110 GLU GLN ALA SER GLN GLU VAL LYS ASN TRP MET THR GLU SEQRES 5 D 110 THR LEU LEU VAL GLN ASN ALA ASN PRO ASP CYS LYS THR SEQRES 6 D 110 ILE LEU LYS ALA LEU GLY PRO GLY ALA THR LEU GLU GLU SEQRES 7 D 110 MET MET THR ALA CYS GLN GLY VAL GLY GLY PRO GLY HIS SEQRES 8 D 110 LYS ALA ARG VAL LEU ALA GLU ALA MET SER GLN VAL THR SEQRES 9 D 110 ASN THR ALA THR ILE MET SEQRES 1 E 110 HIS MET HIS HIS HIS HIS HIS HIS GLY GLY SER PRO THR SEQRES 2 E 110 SER ILE LEU ASP ILE ARG GLN GLY PRO LYS GLU PRO PHE SEQRES 3 E 110 ARG ASP TYR VAL ASP ARG PHE TYR LYS THR LEU ARG ALA SEQRES 4 E 110 GLU GLN ALA SER GLN GLU VAL LYS ASN TRP MET THR GLU SEQRES 5 E 110 THR LEU LEU VAL GLN ASN ALA ASN PRO ASP CYS LYS THR SEQRES 6 E 110 ILE LEU LYS ALA LEU GLY PRO GLY ALA THR LEU GLU GLU SEQRES 7 E 110 MET MET THR ALA CYS GLN GLY VAL GLY GLY PRO GLY HIS SEQRES 8 E 110 LYS ALA ARG VAL LEU ALA GLU ALA MET SER GLN VAL THR SEQRES 9 E 110 ASN THR ALA THR ILE MET SEQRES 1 F 110 HIS MET HIS HIS HIS HIS HIS HIS GLY GLY SER PRO THR SEQRES 2 F 110 SER ILE LEU ASP ILE ARG GLN GLY PRO LYS GLU PRO PHE SEQRES 3 F 110 ARG ASP TYR VAL ASP ARG PHE TYR LYS THR LEU ARG ALA SEQRES 4 F 110 GLU GLN ALA SER GLN GLU VAL LYS ASN TRP MET THR GLU SEQRES 5 F 110 THR LEU LEU VAL GLN ASN ALA ASN PRO ASP CYS LYS THR SEQRES 6 F 110 ILE LEU LYS ALA LEU GLY PRO GLY ALA THR LEU GLU GLU SEQRES 7 F 110 MET MET THR ALA CYS GLN GLY VAL GLY GLY PRO GLY HIS SEQRES 8 F 110 LYS ALA ARG VAL LEU ALA GLU ALA MET SER GLN VAL THR SEQRES 9 F 110 ASN THR ALA THR ILE MET HELIX 1 AA1 SER A 281 ILE A 285 5 5 HELIX 2 AA2 PRO A 292 ARG A 305 1 14 HELIX 3 AA3 SER A 310 ASN A 325 1 16 HELIX 4 AA4 ASN A 327 GLY A 338 1 12 HELIX 5 AA5 THR A 342 CYS A 350 1 9 HELIX 6 AA6 GLY A 355 VAL A 370 1 16 HELIX 7 AA7 SER B 281 ILE B 285 5 5 HELIX 8 AA8 PRO B 292 ARG B 305 1 14 HELIX 9 AA9 SER B 310 ASN B 325 1 16 HELIX 10 AB1 ASN B 327 GLY B 338 1 12 HELIX 11 AB2 THR B 342 GLN B 351 1 10 HELIX 12 AB3 GLY B 355 VAL B 370 1 16 HELIX 13 AB4 SER C 281 ILE C 285 5 5 HELIX 14 AB5 PRO C 292 ARG C 305 1 14 HELIX 15 AB6 SER C 310 ASN C 325 1 16 HELIX 16 AB7 ASN C 327 GLY C 338 1 12 HELIX 17 AB8 THR C 342 GLN C 351 1 10 HELIX 18 AB9 GLY C 355 GLN C 369 1 15 HELIX 19 AC1 SER D 281 ILE D 285 5 5 HELIX 20 AC2 PRO D 292 ARG D 305 1 14 HELIX 21 AC3 SER D 310 ASN D 325 1 16 HELIX 22 AC4 PRO D 328 ILE D 333 1 6 HELIX 23 AC5 LEU D 334 LEU D 337 5 4 HELIX 24 AC6 THR D 342 GLN D 351 1 10 HELIX 25 AC7 GLY D 357 GLN D 369 1 13 HELIX 26 AC8 PRO E 292 ARG E 305 1 14 HELIX 27 AC9 SER E 310 ASN E 325 1 16 HELIX 28 AD1 ASN E 327 GLY E 338 1 12 HELIX 29 AD2 THR E 342 GLN E 351 1 10 HELIX 30 AD3 GLY E 355 SER E 368 1 14 HELIX 31 AD4 SER F 281 ILE F 285 5 5 HELIX 32 AD5 PRO F 292 ARG F 305 1 14 HELIX 33 AD6 SER F 310 ASN F 325 1 16 HELIX 34 AD7 ASN F 327 GLY F 338 1 12 HELIX 35 AD8 THR F 342 GLN F 351 1 10 HELIX 36 AD9 GLY F 355 GLN F 369 1 15 CRYST1 71.356 122.983 81.820 90.00 95.04 90.00 C 1 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014014 0.000000 0.001236 0.00000 SCALE2 0.000000 0.008131 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012269 0.00000