HEADER RNA 22-NOV-18 6N5K TITLE STRUCTURE OF HUMAN PIR-MIRNA-449C APICAL LOOP AND ONE-BASE-PAIR FUSED TITLE 2 TO THE YDAO RIBOSWITCH SCAFFOLD COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA (125-MER); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: IN VITRO TRANSCRIPTION VECTOR PT7-FLUC(DELTAI); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 905932 KEYWDS MICRORNA, RNA PROCESSING, PROTEIN-RNA INTERACTION, RNA EXPDTA X-RAY DIFFRACTION AUTHOR G.M.SHOFFNER,Z.PENG,F.GUO REVDAT 2 11-OCT-23 6N5K 1 COMPND HETNAM REVDAT 1 27-NOV-19 6N5K 0 JRNL AUTH G.M.SHOFFNER,Z.PENG,F.GUO JRNL TITL THREE-DIMENSIONAL STRUCTURES OF PRI-MIRNA APICAL JUNCTIONS JRNL TITL 2 AND LOOPS REVEALED BY SCAFFOLD-DIRECTED CRYSTALLOGRAPHY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 16046 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1607 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 74.8686 - 6.8886 1.00 1405 157 0.1482 0.1506 REMARK 3 2 6.8886 - 5.4682 1.00 1330 148 0.1535 0.1628 REMARK 3 3 5.4682 - 4.7771 1.00 1328 147 0.1590 0.1491 REMARK 3 4 4.7771 - 4.3404 1.00 1319 147 0.1595 0.1902 REMARK 3 5 4.3404 - 4.0293 1.00 1297 144 0.1767 0.2134 REMARK 3 6 4.0293 - 3.7917 1.00 1298 145 0.2017 0.2068 REMARK 3 7 3.7917 - 3.6019 0.99 1305 145 0.2177 0.2079 REMARK 3 8 3.6019 - 3.4451 1.00 1284 142 0.2381 0.2590 REMARK 3 9 3.4451 - 3.3124 0.99 1280 143 0.2358 0.2664 REMARK 3 10 3.3124 - 3.1981 1.00 1308 146 0.2713 0.2731 REMARK 3 11 3.1981 - 3.0981 1.00 1285 143 0.3856 0.4200 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 123.8 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: RESID 11:23 REMARK 3 ORIGIN FOR THE GROUP (A): -73.0745 16.3911 -16.9780 REMARK 3 T TENSOR REMARK 3 T11: 1.1321 T22: 1.3642 REMARK 3 T33: 1.5554 T12: 0.1010 REMARK 3 T13: 0.1142 T23: -0.1236 REMARK 3 L TENSOR REMARK 3 L11: 0.4619 L22: 0.4542 REMARK 3 L33: 0.5578 L12: 0.6569 REMARK 3 L13: 0.3097 L23: -0.0605 REMARK 3 S TENSOR REMARK 3 S11: 0.0879 S12: 0.0167 S13: 0.9251 REMARK 3 S21: 0.1641 S22: -0.0142 S23: 1.1536 REMARK 3 S31: -0.9265 S32: -1.1447 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: RESID 24:36 OR RESID 97:107 REMARK 3 ORIGIN FOR THE GROUP (A): -45.7599 10.4962 -8.3192 REMARK 3 T TENSOR REMARK 3 T11: 0.8596 T22: 0.7815 REMARK 3 T33: 0.8637 T12: -0.1231 REMARK 3 T13: 0.0174 T23: -0.0412 REMARK 3 L TENSOR REMARK 3 L11: -0.3780 L22: 1.9749 REMARK 3 L33: 0.9193 L12: -0.1480 REMARK 3 L13: -0.0572 L23: -0.8403 REMARK 3 S TENSOR REMARK 3 S11: 0.0971 S12: -0.0159 S13: 0.0584 REMARK 3 S21: 0.2458 S22: -0.1315 S23: -0.1398 REMARK 3 S31: -0.0472 S32: 0.0289 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: RESID 40:49 OR RESID 88:96 REMARK 3 ORIGIN FOR THE GROUP (A): -40.9693 26.9852 -14.8767 REMARK 3 T TENSOR REMARK 3 T11: 0.9637 T22: 0.9983 REMARK 3 T33: 1.0168 T12: -0.1837 REMARK 3 T13: 0.0733 T23: -0.0571 REMARK 3 L TENSOR REMARK 3 L11: -0.0020 L22: 0.0906 REMARK 3 L33: -0.3837 L12: 0.1927 REMARK 3 L13: -0.0785 L23: 1.2860 REMARK 3 S TENSOR REMARK 3 S11: 0.0266 S12: 0.0025 S13: 0.0393 REMARK 3 S21: 0.0108 S22: 0.2425 S23: -0.2731 REMARK 3 S31: -0.3660 S32: 0.5676 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: RESID 50:74 OR RESID 82:87 REMARK 3 ORIGIN FOR THE GROUP (A): -35.5562 29.2043 -34.4029 REMARK 3 T TENSOR REMARK 3 T11: 1.1327 T22: 1.0658 REMARK 3 T33: 1.0437 T12: -0.3341 REMARK 3 T13: 0.2934 T23: 0.0996 REMARK 3 L TENSOR REMARK 3 L11: 3.2993 L22: 0.2699 REMARK 3 L33: 2.7590 L12: -1.7648 REMARK 3 L13: -1.7723 L23: -0.9598 REMARK 3 S TENSOR REMARK 3 S11: 0.5665 S12: -0.1906 S13: 0.7066 REMARK 3 S21: -0.2743 S22: -0.2656 S23: -0.5450 REMARK 3 S31: -1.0559 S32: 0.8921 S33: -0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: RESID 76:81 OR RESID 118:125 REMARK 3 ORIGIN FOR THE GROUP (A): -47.3336 -0.2980 -46.3659 REMARK 3 T TENSOR REMARK 3 T11: 1.1056 T22: 1.0049 REMARK 3 T33: 0.8817 T12: 0.2125 REMARK 3 T13: 0.1087 T23: -0.0394 REMARK 3 L TENSOR REMARK 3 L11: 0.1704 L22: 1.2310 REMARK 3 L33: 0.4071 L12: -1.4695 REMARK 3 L13: -0.0565 L23: -0.9855 REMARK 3 S TENSOR REMARK 3 S11: 0.3837 S12: 0.3840 S13: 0.0278 REMARK 3 S21: -0.6838 S22: -0.3187 S23: -0.0557 REMARK 3 S31: -0.0653 S32: -0.2440 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6N5K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1000238222. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : 0.9791 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16089 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.098 REMARK 200 RESOLUTION RANGE LOW (A) : 74.847 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 39.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 39.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4QK8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 76.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MAGNESIUM CHLORIDE, CYCLIC DI-AMP, REMARK 280 POTASSIUM CHLORIDE, HEPES, PH 7.4, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.27667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 76.55333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 76.55333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 38.27667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GTP A 1 PG O1G O2G O3G REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 205 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G A 8 O6 REMARK 620 2 HOH A 303 O 136.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G A 30 OP2 REMARK 620 2 G A 97 OP1 86.8 REMARK 620 3 C A 98 OP2 160.8 74.6 REMARK 620 4 U A 99 O4 82.3 85.8 91.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2BA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2BA A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 206 DBREF 6N5K A 1 125 PDB 6N5K 6N5K 1 125 SEQRES 1 A 125 GTP G U U G C C G A A U C C SEQRES 2 A 125 A U G A U U U G G U A C G SEQRES 3 A 125 G A G G A A C C G C U U U SEQRES 4 A 125 U U G G G G U U A A U C U SEQRES 5 A 125 G C A G U G A A G C U G C SEQRES 6 A 125 A G U A G G G A U A C C U SEQRES 7 A 125 U C U G U C C C G C A C C SEQRES 8 A 125 C G A C A G C U A A C U C SEQRES 9 A 125 C G G A G G C A A U A A A SEQRES 10 A 125 G G A A G G A G HET GTP A 1 28 HET 2BA A 201 44 HET 2BA A 202 44 HET MG A 203 1 HET K A 204 1 HET MG A 205 1 HET SO4 A 206 5 HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM 2BA (2R,3R,3AS,5R,7AR,9R,10R,10AS,12R,14AR)-2,9-BIS(6- HETNAM 2 2BA AMINO-9H-PURIN-9-YL)OCTAHYDRO-2H,7H-DIFURO[3,2-D:3', HETNAM 3 2BA 2'-J][1,3,7,9,2,8 ]TETRAOXADIPHOSPHACYCLODODECINE-3,5, HETNAM 4 2BA 10,12-TETROL 5,12-DIOXIDE HETNAM MG MAGNESIUM ION HETNAM K POTASSIUM ION HETNAM SO4 SULFATE ION HETSYN 2BA BIS-(3',5')-CYCLIC-DIMERIC-ADENOSINE-MONOPHOSPHATE FORMUL 1 GTP C10 H16 N5 O14 P3 FORMUL 2 2BA 2(C20 H24 N10 O12 P2) FORMUL 4 MG 2(MG 2+) FORMUL 5 K K 1+ FORMUL 7 SO4 O4 S 2- FORMUL 8 HOH *6(H2 O) LINK O3' GTP A 1 P G A 2 1555 1555 1.57 LINK O6 G A 8 MG MG A 205 1555 1555 2.99 LINK OP2 G A 30 MG MG A 203 1555 1555 2.08 LINK OP1 G A 97 MG MG A 203 1555 1555 2.37 LINK OP2 C A 98 MG MG A 203 1555 1555 2.09 LINK O4 U A 99 MG MG A 203 1555 1555 2.23 LINK MG MG A 205 O HOH A 303 1555 1555 2.44 SITE 1 AC1 15 G A 5 C A 6 C A 7 G A 8 SITE 2 AC1 15 A A 48 G A 71 G A 72 A A 73 SITE 3 AC1 15 U A 74 A A 75 C A 85 C A 86 SITE 4 AC1 15 G A 110 C A 111 A A 112 SITE 1 AC2 14 A A 9 G A 26 G A 27 A A 28 SITE 2 AC2 14 G A 29 G A 44 G A 45 U A 46 SITE 3 AC2 14 U A 47 C A 91 C A 92 A A 96 SITE 4 AC2 14 C A 105 G A 106 SITE 1 AC3 5 G A 30 A A 96 G A 97 C A 98 SITE 2 AC3 5 U A 99 SITE 1 AC4 1 GTP A 1 SITE 1 AC5 3 G A 2 G A 8 HOH A 303 SITE 1 AC6 3 A A 32 C A 98 U A 99 CRYST1 113.960 113.960 114.830 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008775 0.005066 0.000000 0.00000 SCALE2 0.000000 0.010133 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008709 0.00000 HETATM 1 O3B GTP A 1 -55.734 1.770 -28.615 1.00132.66 O HETATM 2 PB GTP A 1 -56.845 2.922 -28.794 1.00137.86 P HETATM 3 O1B GTP A 1 -56.355 3.958 -29.777 1.00128.01 O HETATM 4 O2B GTP A 1 -57.177 3.546 -27.458 1.00126.95 O HETATM 5 O3A GTP A 1 -58.105 2.148 -29.433 1.00130.61 O HETATM 6 PA GTP A 1 -59.433 2.952 -29.862 1.00126.33 P HETATM 7 O1A GTP A 1 -59.233 3.591 -31.214 1.00120.29 O HETATM 8 O2A GTP A 1 -60.619 2.018 -29.869 1.00126.66 O HETATM 9 O5' GTP A 1 -59.626 4.081 -28.734 1.00114.19 O HETATM 10 C5' GTP A 1 -60.477 3.845 -27.634 1.00109.93 C HETATM 11 C4' GTP A 1 -61.026 5.152 -27.070 1.00103.90 C HETATM 12 O4' GTP A 1 -59.949 6.012 -26.755 1.00102.55 O HETATM 13 C3' GTP A 1 -61.918 5.945 -28.012 1.00101.59 C HETATM 14 O3' GTP A 1 -63.273 5.582 -27.901 1.00 99.97 O HETATM 15 C2' GTP A 1 -61.709 7.365 -27.534 1.00100.26 C HETATM 16 O2' GTP A 1 -62.631 7.668 -26.512 1.00 97.60 O HETATM 17 C1' GTP A 1 -60.297 7.365 -26.975 1.00 99.87 C HETATM 18 N9 GTP A 1 -59.406 7.904 -28.015 1.00 99.34 N HETATM 19 C8 GTP A 1 -58.393 7.213 -28.625 1.00102.75 C HETATM 20 N7 GTP A 1 -57.794 8.023 -29.524 1.00100.45 N HETATM 21 C5 GTP A 1 -58.405 9.226 -29.493 1.00 96.31 C HETATM 22 C6 GTP A 1 -58.183 10.399 -30.204 1.00 95.46 C HETATM 23 O6 GTP A 1 -57.282 10.454 -31.042 1.00 98.42 O HETATM 24 N1 GTP A 1 -58.978 11.501 -29.962 1.00 94.08 N HETATM 25 C2 GTP A 1 -59.982 11.431 -29.021 1.00 93.86 C HETATM 26 N2 GTP A 1 -60.744 12.496 -28.794 1.00 94.01 N HETATM 27 N3 GTP A 1 -60.196 10.261 -28.320 1.00 95.80 N HETATM 28 C4 GTP A 1 -59.422 9.171 -28.549 1.00 97.60 C