HEADER HYDROLASE 26-NOV-18 6N69 TITLE RAT HPGDS COMPLEXED WITH A QUINOLINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMATOPOIETIC PROSTAGLANDIN D SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: H-PGDS,GST CLASS-SIGMA,GLUTATHIONE S-TRANSFERASE, COMPND 5 GLUTATHIONE-DEPENDENT PGD SYNTHASE,GLUTATHIONE-REQUIRING COMPND 6 PROSTAGLANDIN D SYNTHASE,PROSTAGLANDIN-H2 D-ISOMERASE; COMPND 7 EC: 5.3.99.2,2.5.1.18; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: HPGDS, GSTS, PGDS, PTGDS2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS PGD2 SYNTHASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.M.SHEWCHUK,A.CLEASBY REVDAT 3 13-MAR-24 6N69 1 REMARK REVDAT 2 10-APR-19 6N69 1 JRNL REVDAT 1 27-MAR-19 6N69 0 JRNL AUTH D.N.DEATON,Y.DO,J.HOLT,M.R.JEUNE,H.F.KRAMER,A.L.LARKIN, JRNL AUTH 2 L.A.ORBAND-MILLER,G.E.PECKHAM,C.POOLE,D.J.PRICE, JRNL AUTH 3 L.T.SCHALLER,Y.SHEN,L.M.SHEWCHUK,E.L.STEWART,J.D.STUART, JRNL AUTH 4 S.A.THOMSON,P.WARD,J.W.WILSON,T.XU,J.H.GUSS,C.MUSETTI, JRNL AUTH 5 A.R.RENDINA,K.AFFLECK,D.ANDERS,A.P.HANCOCK,H.HOBBS, JRNL AUTH 6 S.T.HODGSON,J.HUTCHINSON,M.V.LEVERIDGE,H.NICHOLLS, JRNL AUTH 7 I.E.D.SMITH,D.O.SOMERS,H.F.SNEDDON,S.UDDIN,A.CLEASBY, JRNL AUTH 8 P.N.MORTENSON,C.RICHARDSON,G.SAXTY JRNL TITL THE DISCOVERY OF QUINOLINE-3-CARBOXAMIDES AS HEMATOPOIETIC JRNL TITL 2 PROSTAGLANDIN D SYNTHASE (H-PGDS) INHIBITORS. JRNL REF BIOORG. MED. CHEM. V. 27 1456 2019 JRNL REFN ESSN 1464-3391 JRNL PMID 30858025 JRNL DOI 10.1016/J.BMC.2019.02.017 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0222 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.29 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 29490 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1599 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2022 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.99 REMARK 3 BIN R VALUE (WORKING SET) : 0.2300 REMARK 3 BIN FREE R VALUE SET COUNT : 99 REMARK 3 BIN FREE R VALUE : 0.3000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3288 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 296 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.20000 REMARK 3 B22 (A**2) : 0.62000 REMARK 3 B33 (A**2) : -0.82000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.184 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.166 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.123 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.429 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3438 ; 0.009 ; 0.015 REMARK 3 BOND LENGTHS OTHERS (A): 3153 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4673 ; 1.341 ; 1.754 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7368 ; 0.461 ; 1.725 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 395 ; 5.858 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 160 ;32.718 ;21.025 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 555 ;14.227 ;15.162 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;16.284 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 441 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3758 ; 0.001 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 654 ; 0.000 ; 0.021 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1586 ; 2.089 ; 4.525 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1587 ; 2.088 ; 4.525 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1852 ; 2.870 ; 5.299 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1853 ; 2.871 ; 5.301 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3981 ; 5.075 ;24.739 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3972 ; 5.076 ;24.666 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 199 REMARK 3 ORIGIN FOR THE GROUP (A): 4.6242 1.2683 -18.2208 REMARK 3 T TENSOR REMARK 3 T11: 0.0834 T22: 0.0070 REMARK 3 T33: 0.0424 T12: -0.0184 REMARK 3 T13: -0.0127 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 1.0913 L22: 2.4590 REMARK 3 L33: 2.2278 L12: -0.2872 REMARK 3 L13: -0.3196 L23: -0.2437 REMARK 3 S TENSOR REMARK 3 S11: 0.0198 S12: 0.0075 S13: 0.1678 REMARK 3 S21: -0.0420 S22: -0.0157 S23: -0.1433 REMARK 3 S31: -0.1794 S32: 0.0486 S33: -0.0041 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 199 REMARK 3 ORIGIN FOR THE GROUP (A): 5.0002 -3.8216 4.9890 REMARK 3 T TENSOR REMARK 3 T11: 0.0513 T22: 0.0192 REMARK 3 T33: 0.0266 T12: -0.0002 REMARK 3 T13: -0.0066 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 1.3261 L22: 1.7952 REMARK 3 L33: 1.9450 L12: -0.5206 REMARK 3 L13: 0.0696 L23: 0.2955 REMARK 3 S TENSOR REMARK 3 S11: -0.0304 S12: -0.0610 S13: 0.0719 REMARK 3 S21: 0.0815 S22: 0.0052 S23: -0.0515 REMARK 3 S31: -0.0800 S32: 0.0574 S33: 0.0252 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6N69 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1000238254. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JAN-10 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29490 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 28.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.480 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.40500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NAF, 24.0%W/V PEG 3350, PH 8.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.59400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.80150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.49850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.80150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.59400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.49850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 63 106.60 77.76 REMARK 500 ASN A 108 105.41 -53.06 REMARK 500 GLU B 57 96.70 -17.16 REMARK 500 GLN B 63 112.95 74.26 REMARK 500 ASN B 108 95.75 -61.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 114 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSH A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KDV A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSH B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KDV B 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6N4E RELATED DB: PDB DBREF 6N69 A 1 199 UNP O35543 HPGDS_RAT 1 199 DBREF 6N69 B 1 199 UNP O35543 HPGDS_RAT 1 199 SEQADV 6N69 GLY A -2 UNP O35543 EXPRESSION TAG SEQADV 6N69 SER A -1 UNP O35543 EXPRESSION TAG SEQADV 6N69 HIS A 0 UNP O35543 EXPRESSION TAG SEQADV 6N69 GLY B -2 UNP O35543 EXPRESSION TAG SEQADV 6N69 SER B -1 UNP O35543 EXPRESSION TAG SEQADV 6N69 HIS B 0 UNP O35543 EXPRESSION TAG SEQRES 1 A 202 GLY SER HIS MET PRO ASN TYR LYS LEU LEU TYR PHE ASN SEQRES 2 A 202 MET ARG GLY ARG ALA GLU ILE ILE ARG TYR ILE PHE ALA SEQRES 3 A 202 TYR LEU ASP ILE LYS TYR GLU ASP HIS ARG ILE GLU GLN SEQRES 4 A 202 ALA ASP TRP PRO LYS ILE LYS PRO THR LEU PRO PHE GLY SEQRES 5 A 202 LYS ILE PRO VAL LEU GLU VAL GLU GLY LEU THR LEU HIS SEQRES 6 A 202 GLN SER LEU ALA ILE ALA ARG TYR LEU THR LYS ASN THR SEQRES 7 A 202 ASP LEU ALA GLY LYS THR GLU LEU GLU GLN CYS GLN VAL SEQRES 8 A 202 ASP ALA VAL VAL ASP THR LEU ASP ASP PHE MET SER LEU SEQRES 9 A 202 PHE PRO TRP ALA GLU GLU ASN GLN ASP LEU LYS GLU ARG SEQRES 10 A 202 THR PHE ASN ASP LEU LEU THR ARG GLN ALA PRO HIS LEU SEQRES 11 A 202 LEU LYS ASP LEU ASP THR TYR LEU GLY ASP LYS GLU TRP SEQRES 12 A 202 PHE ILE GLY ASN TYR VAL THR TRP ALA ASP PHE TYR TRP SEQRES 13 A 202 ASP ILE CYS SER THR THR LEU LEU VAL LEU LYS PRO ASP SEQRES 14 A 202 LEU LEU GLY ILE TYR PRO ARG LEU VAL SER LEU ARG ASN SEQRES 15 A 202 LYS VAL GLN ALA ILE PRO ALA ILE SER ALA TRP ILE LEU SEQRES 16 A 202 LYS ARG PRO GLN THR LYS LEU SEQRES 1 B 202 GLY SER HIS MET PRO ASN TYR LYS LEU LEU TYR PHE ASN SEQRES 2 B 202 MET ARG GLY ARG ALA GLU ILE ILE ARG TYR ILE PHE ALA SEQRES 3 B 202 TYR LEU ASP ILE LYS TYR GLU ASP HIS ARG ILE GLU GLN SEQRES 4 B 202 ALA ASP TRP PRO LYS ILE LYS PRO THR LEU PRO PHE GLY SEQRES 5 B 202 LYS ILE PRO VAL LEU GLU VAL GLU GLY LEU THR LEU HIS SEQRES 6 B 202 GLN SER LEU ALA ILE ALA ARG TYR LEU THR LYS ASN THR SEQRES 7 B 202 ASP LEU ALA GLY LYS THR GLU LEU GLU GLN CYS GLN VAL SEQRES 8 B 202 ASP ALA VAL VAL ASP THR LEU ASP ASP PHE MET SER LEU SEQRES 9 B 202 PHE PRO TRP ALA GLU GLU ASN GLN ASP LEU LYS GLU ARG SEQRES 10 B 202 THR PHE ASN ASP LEU LEU THR ARG GLN ALA PRO HIS LEU SEQRES 11 B 202 LEU LYS ASP LEU ASP THR TYR LEU GLY ASP LYS GLU TRP SEQRES 12 B 202 PHE ILE GLY ASN TYR VAL THR TRP ALA ASP PHE TYR TRP SEQRES 13 B 202 ASP ILE CYS SER THR THR LEU LEU VAL LEU LYS PRO ASP SEQRES 14 B 202 LEU LEU GLY ILE TYR PRO ARG LEU VAL SER LEU ARG ASN SEQRES 15 B 202 LYS VAL GLN ALA ILE PRO ALA ILE SER ALA TRP ILE LEU SEQRES 16 B 202 LYS ARG PRO GLN THR LYS LEU HET GSH A 201 20 HET KDV A 202 18 HET GSH B 201 20 HET KDV B 202 18 HETNAM GSH GLUTATHIONE HETNAM KDV QUINOLINE-3-CARBONITRILE FORMUL 3 GSH 2(C10 H17 N3 O6 S) FORMUL 4 KDV 2(C10 H6 N2) FORMUL 7 HOH *296(H2 O) HELIX 1 AA1 ARG A 12 ARG A 14 5 3 HELIX 2 AA2 ALA A 15 LEU A 25 1 11 HELIX 3 AA3 GLU A 35 ALA A 37 5 3 HELIX 4 AA4 ASP A 38 LYS A 43 1 6 HELIX 5 AA5 PRO A 44 LEU A 46 5 3 HELIX 6 AA6 GLN A 63 LYS A 73 1 11 HELIX 7 AA7 THR A 75 GLY A 79 5 5 HELIX 8 AA8 THR A 81 LEU A 101 1 21 HELIX 9 AA9 ASN A 108 ARG A 122 1 15 HELIX 10 AB1 GLN A 123 GLY A 136 1 14 HELIX 11 AB2 THR A 147 LYS A 164 1 18 HELIX 12 AB3 TYR A 171 ILE A 184 1 14 HELIX 13 AB4 ILE A 184 ARG A 194 1 11 HELIX 14 AB5 ARG B 12 ARG B 14 5 3 HELIX 15 AB6 ALA B 15 ASP B 26 1 12 HELIX 16 AB7 GLU B 35 ALA B 37 5 3 HELIX 17 AB8 ASP B 38 LYS B 43 1 6 HELIX 18 AB9 PRO B 44 LEU B 46 5 3 HELIX 19 AC1 GLN B 63 LYS B 73 1 11 HELIX 20 AC2 THR B 75 GLY B 79 5 5 HELIX 21 AC3 THR B 81 SER B 100 1 20 HELIX 22 AC4 ASN B 108 ARG B 122 1 15 HELIX 23 AC5 GLN B 123 GLY B 136 1 14 HELIX 24 AC6 THR B 147 LYS B 164 1 18 HELIX 25 AC7 TYR B 171 ILE B 184 1 14 HELIX 26 AC8 ILE B 184 ARG B 194 1 11 SHEET 1 AA1 4 GLU A 30 ILE A 34 0 SHEET 2 AA1 4 TYR A 4 PHE A 9 1 N TYR A 4 O GLU A 30 SHEET 3 AA1 4 VAL A 53 VAL A 56 -1 O GLU A 55 N LYS A 5 SHEET 4 AA1 4 LEU A 59 HIS A 62 -1 O LEU A 61 N LEU A 54 SHEET 1 AA2 4 GLU B 30 ILE B 34 0 SHEET 2 AA2 4 LYS B 5 PHE B 9 1 N LEU B 6 O GLU B 30 SHEET 3 AA2 4 VAL B 53 GLU B 55 -1 O VAL B 53 N LEU B 7 SHEET 4 AA2 4 THR B 60 HIS B 62 -1 O LEU B 61 N LEU B 54 CISPEP 1 ILE A 51 PRO A 52 0 12.84 CISPEP 2 ILE B 51 PRO B 52 0 8.54 SITE 1 AC1 14 TYR A 8 ARG A 14 TRP A 39 LYS A 43 SITE 2 AC1 14 LYS A 50 ILE A 51 PRO A 52 GLN A 63 SITE 3 AC1 14 SER A 64 HOH A 330 HOH A 336 HOH A 380 SITE 4 AC1 14 HOH A 404 ASP B 97 SITE 1 AC2 6 MET A 11 GLY A 13 ARG A 14 MET A 99 SITE 2 AC2 6 TRP A 104 TYR A 152 SITE 1 AC3 14 ASP A 97 TYR B 8 ARG B 14 TRP B 39 SITE 2 AC3 14 LYS B 43 LYS B 50 ILE B 51 PRO B 52 SITE 3 AC3 14 GLN B 63 SER B 64 HOH B 325 HOH B 365 SITE 4 AC3 14 HOH B 366 HOH B 399 SITE 1 AC4 5 GLY B 13 ARG B 14 MET B 99 TRP B 104 SITE 2 AC4 5 HOH B 302 CRYST1 57.188 80.997 97.603 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017486 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012346 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010246 0.00000