data_6N6F # _entry.id 6N6F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.321 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6N6F WWPDB D_1000238262 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6N6F _pdbx_database_status.recvd_initial_deposition_date 2018-11-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Lormand, J.D.' 1 ? 'Sondermann, H.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Elife _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2050-084X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 8 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'A dedicated diribonucleotidase resolves a key bottleneck for the terminal step of RNA degradation.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.7554/eLife.46313 _citation.pdbx_database_id_PubMed 31225796 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kim, S.K.' 1 ? primary 'Lormand, J.D.' 2 ? primary 'Weiss, C.A.' 3 ? primary 'Eger, K.A.' 4 ? primary 'Turdiev, H.' 5 ? primary 'Turdiev, A.' 6 ? primary 'Winkler, W.C.' 7 ? primary 'Sondermann, H.' 8 0000-0003-2211-6234 primary 'Lee, V.T.' 9 0000-0002-3593-0318 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 6N6F _cell.details ? _cell.formula_units_Z ? _cell.length_a 88.715 _cell.length_a_esd ? _cell.length_b 88.715 _cell.length_b_esd ? _cell.length_c 59.780 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N6F _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Oligoribonuclease 20954.910 1 3.1.-.- ? ? ? 2 polymer syn ;RNA (5'-R(P*GP*C)-3') ; 605.430 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 water nat water 18.015 223 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MSFSDQNLIWIDLEMTGLDPEMHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHTASGLVARVRQSQV SEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYFHYRYIDVSTIKELTRRWQPEVLKEFSKTGSHLA LDDIRESIAELQFYRKAVFKI ; ;MSFSDQNLIWIDLEMTGLDPEMHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHTASGLVARVRQSQV SEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYFHYRYIDVSTIKELTRRWQPEVLKEFSKTGSHLA LDDIRESIAELQFYRKAVFKI ; A ? 2 polyribonucleotide no no GC GC D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 PHE n 1 4 SER n 1 5 ASP n 1 6 GLN n 1 7 ASN n 1 8 LEU n 1 9 ILE n 1 10 TRP n 1 11 ILE n 1 12 ASP n 1 13 LEU n 1 14 GLU n 1 15 MET n 1 16 THR n 1 17 GLY n 1 18 LEU n 1 19 ASP n 1 20 PRO n 1 21 GLU n 1 22 MET n 1 23 HIS n 1 24 LYS n 1 25 ILE n 1 26 ILE n 1 27 GLU n 1 28 MET n 1 29 ALA n 1 30 THR n 1 31 ILE n 1 32 VAL n 1 33 THR n 1 34 ASP n 1 35 SER n 1 36 GLU n 1 37 LEU n 1 38 ASN n 1 39 ILE n 1 40 LEU n 1 41 ALA n 1 42 GLU n 1 43 GLY n 1 44 PRO n 1 45 VAL n 1 46 ILE n 1 47 ALA n 1 48 ILE n 1 49 HIS n 1 50 GLN n 1 51 PRO n 1 52 GLU n 1 53 SER n 1 54 GLU n 1 55 LEU n 1 56 ALA n 1 57 LYS n 1 58 MET n 1 59 ASP n 1 60 GLU n 1 61 TRP n 1 62 CYS n 1 63 THR n 1 64 THR n 1 65 THR n 1 66 HIS n 1 67 THR n 1 68 ALA n 1 69 SER n 1 70 GLY n 1 71 LEU n 1 72 VAL n 1 73 ALA n 1 74 ARG n 1 75 VAL n 1 76 ARG n 1 77 GLN n 1 78 SER n 1 79 GLN n 1 80 VAL n 1 81 SER n 1 82 GLU n 1 83 GLU n 1 84 GLU n 1 85 ALA n 1 86 ILE n 1 87 ASP n 1 88 GLN n 1 89 THR n 1 90 LEU n 1 91 ALA n 1 92 PHE n 1 93 LEU n 1 94 LYS n 1 95 GLN n 1 96 TRP n 1 97 VAL n 1 98 PRO n 1 99 GLU n 1 100 GLY n 1 101 LYS n 1 102 SER n 1 103 PRO n 1 104 ILE n 1 105 CYS n 1 106 GLY n 1 107 ASN n 1 108 SER n 1 109 ILE n 1 110 GLY n 1 111 GLN n 1 112 ASP n 1 113 ARG n 1 114 ARG n 1 115 PHE n 1 116 LEU n 1 117 TYR n 1 118 LYS n 1 119 HIS n 1 120 MET n 1 121 PRO n 1 122 ARG n 1 123 LEU n 1 124 GLU n 1 125 ALA n 1 126 TYR n 1 127 PHE n 1 128 HIS n 1 129 TYR n 1 130 ARG n 1 131 TYR n 1 132 ILE n 1 133 ASP n 1 134 VAL n 1 135 SER n 1 136 THR n 1 137 ILE n 1 138 LYS n 1 139 GLU n 1 140 LEU n 1 141 THR n 1 142 ARG n 1 143 ARG n 1 144 TRP n 1 145 GLN n 1 146 PRO n 1 147 GLU n 1 148 VAL n 1 149 LEU n 1 150 LYS n 1 151 GLU n 1 152 PHE n 1 153 SER n 1 154 LYS n 1 155 THR n 1 156 GLY n 1 157 SER n 1 158 HIS n 1 159 LEU n 1 160 ALA n 1 161 LEU n 1 162 ASP n 1 163 ASP n 1 164 ILE n 1 165 ARG n 1 166 GLU n 1 167 SER n 1 168 ILE n 1 169 ALA n 1 170 GLU n 1 171 LEU n 1 172 GLN n 1 173 PHE n 1 174 TYR n 1 175 ARG n 1 176 LYS n 1 177 ALA n 1 178 VAL n 1 179 PHE n 1 180 LYS n 1 181 ILE n 2 1 G n 2 2 C n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 181 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene orn _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vibrio cholerae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 666 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21DE3 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 2 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP A0A0H6V4D7_VIBCL A0A0H6V4D7 ? 1 ;MSFSDQNLIWIDLEMTGLDPEMHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHTASGLVARVRQSQV SEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYFHYRYIDVSTIKELTRRWQPEVLKEFSKTGSHLA LDDIRESIAELQFYRKAVFKI ; 1 2 PDB 6N6F 6N6F ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6N6F A 1 ? 181 ? A0A0H6V4D7 1 ? 181 ? 1 181 2 2 6N6F D 1 ? 2 ? 6N6F 603 ? 604 ? 603 604 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6N6F _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.15 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 60.95 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M BisTris (pH 5.5), 17% polyethylene glycol 3350, and 20% xylitol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-03-14 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111) crystal' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.977 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'CHESS BEAMLINE F1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.977 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline F1 _diffrn_source.pdbx_synchrotron_site CHESS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6N6F _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.735 _reflns.d_resolution_low 47.180 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all 28405 _reflns.number_obs 28405 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.900 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.054 _reflns.pdbx_netI_over_av_sigmaI 9.600 _reflns.pdbx_netI_over_sigmaI 24.000 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.056 _reflns.pdbx_Rpim_I_all 0.016 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 338345 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.740 1.830 ? 0.800 ? ? ? ? 4050 98.900 ? ? ? ? 1.033 ? ? ? ? ? ? ? ? 11.600 1.033 ? ? ? 1.080 0.312 ? 1 1 ? ? 1.830 1.940 ? 1.300 ? ? ? ? 3909 100.000 ? ? ? ? 0.580 ? ? ? ? ? ? ? ? 11.800 0.580 ? ? ? 0.606 0.175 ? 2 1 ? ? 1.940 2.070 ? 2.500 ? ? ? ? 3643 100.000 ? ? ? ? 0.312 ? ? ? ? ? ? ? ? 12.200 0.312 ? ? ? 0.326 0.093 ? 3 1 ? ? 2.070 2.240 ? 4.500 ? ? ? ? 3403 100.000 ? ? ? ? 0.172 ? ? ? ? ? ? ? ? 12.300 0.172 ? ? ? 0.179 0.051 ? 4 1 ? ? 2.240 2.450 ? 7.000 ? ? ? ? 3155 100.000 ? ? ? ? 0.109 ? ? ? ? ? ? ? ? 12.000 0.109 ? ? ? 0.114 0.033 ? 5 1 ? ? 2.450 2.740 ? 10.300 ? ? ? ? 2872 100.000 ? ? ? ? 0.071 ? ? ? ? ? ? ? ? 12.100 0.071 ? ? ? 0.075 0.021 ? 6 1 ? ? 2.740 3.170 ? 14.100 ? ? ? ? 2540 100.000 ? ? ? ? 0.047 ? ? ? ? ? ? ? ? 11.900 0.047 ? ? ? 0.049 0.014 ? 7 1 ? ? 3.170 3.880 ? 17.900 ? ? ? ? 2148 100.000 ? ? ? ? 0.035 ? ? ? ? ? ? ? ? 11.800 0.035 ? ? ? 0.036 0.010 ? 8 1 ? ? 3.880 5.490 ? 20.900 ? ? ? ? 1704 100.000 ? ? ? ? 0.029 ? ? ? ? ? ? ? ? 11.500 0.029 ? ? ? 0.030 0.009 ? 9 1 ? ? 5.490 47.180 ? 20.000 ? ? ? ? 981 99.900 ? ? ? ? 0.027 ? ? ? ? ? ? ? ? 11.100 0.027 ? ? ? 0.028 0.008 ? 10 1 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 95.510 _refine.B_iso_mean 36.3173 _refine.B_iso_min 21.060 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6N6F _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.7350 _refine.ls_d_res_low 32.3170 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 28374 _refine.ls_number_reflns_R_free 1421 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.8200 _refine.ls_percent_reflns_R_free 5.0100 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1555 _refine.ls_R_factor_R_free 0.1699 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1547 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.350 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6N6A _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 17.6700 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1700 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.7350 _refine_hist.d_res_low 32.3170 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 226 _refine_hist.number_atoms_total 1735 _refine_hist.pdbx_number_residues_total 182 _refine_hist.pdbx_B_iso_mean_ligand 31.09 _refine_hist.pdbx_B_iso_mean_solvent 48.31 _refine_hist.pdbx_number_atoms_protein 1464 _refine_hist.pdbx_number_atoms_nucleic_acid 44 # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.7352 1.7972 2752 . 137 2615 98.0000 . . . 0.2590 0.0000 0.2576 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 1.7972 1.8692 2823 . 135 2688 100.0000 . . . 0.2364 0.0000 0.2105 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 1.8692 1.9542 2803 . 150 2653 100.0000 . . . 0.2254 0.0000 0.1903 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 1.9542 2.0573 2840 . 138 2702 100.0000 . . . 0.2112 0.0000 0.1688 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 2.0573 2.1861 2798 . 142 2656 100.0000 . . . 0.1838 0.0000 0.1540 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 2.1861 2.3549 2824 . 135 2689 100.0000 . . . 0.1576 0.0000 0.1569 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 2.3549 2.5918 2822 . 147 2675 100.0000 . . . 0.1562 0.0000 0.1596 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 2.5918 2.9666 2868 . 138 2730 100.0000 . . . 0.1785 0.0000 0.1566 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 2.9666 3.7367 2877 . 151 2726 100.0000 . . . 0.1688 0.0000 0.1437 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 3.7367 32.3230 2967 . 148 2819 100.0000 . . . 0.1484 0.0000 0.1430 . . . . . . 10 . . . # _struct.entry_id 6N6F _struct.title 'Vibrio cholerae Oligoribonuclease bound to pGC' _struct.pdbx_descriptor 'Oligoribonuclease/RNA Complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6N6F _struct_keywords.text ;3'-5' exoribonuclease, RNA BINDING PROTEIN, rna binding protein-rna complex ; _struct_keywords.pdbx_keywords 'rna binding protein/rna' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 51 ? ALA A 56 ? PRO A 51 ALA A 56 1 ? 6 HELX_P HELX_P2 AA2 ASP A 59 ? SER A 69 ? ASP A 59 SER A 69 1 ? 11 HELX_P HELX_P3 AA3 GLY A 70 ? SER A 78 ? GLY A 70 SER A 78 1 ? 9 HELX_P HELX_P4 AA4 SER A 81 ? LYS A 94 ? SER A 81 LYS A 94 1 ? 14 HELX_P HELX_P5 AA5 SER A 108 ? MET A 120 ? SER A 108 MET A 120 1 ? 13 HELX_P HELX_P6 AA6 MET A 120 ? ALA A 125 ? MET A 120 ALA A 125 1 ? 6 HELX_P HELX_P7 AA7 VAL A 134 ? GLN A 145 ? VAL A 134 GLN A 145 1 ? 12 HELX_P HELX_P8 AA8 PRO A 146 ? PHE A 152 ? PRO A 146 PHE A 152 5 ? 7 HELX_P HELX_P9 AA9 LEU A 159 ? VAL A 178 ? LEU A 159 VAL A 178 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A ASP 12 OD1 ? ? ? 1_555 C NA . NA ? ? A ASP 12 D NA 701 1_555 ? ? ? ? ? ? ? 2.389 ? metalc2 metalc ? ? B G 1 "O3'" A ? ? 1_555 C NA . NA ? ? D G 603 D NA 701 1_555 ? ? ? ? ? ? ? 2.647 ? metalc3 metalc ? ? B G 1 "O3'" B ? ? 1_555 C NA . NA ? ? D G 603 D NA 701 1_555 ? ? ? ? ? ? ? 2.599 ? metalc4 metalc ? ? B C 2 OP1 ? ? ? 1_555 C NA . NA ? ? D C 604 D NA 701 1_555 ? ? ? ? ? ? ? 2.423 ? metalc5 metalc ? ? C NA . NA ? ? ? 1_555 D HOH . O ? ? D NA 701 A HOH 212 1_555 ? ? ? ? ? ? ? 2.319 ? metalc6 metalc ? ? C NA . NA ? ? ? 1_555 D HOH . O ? ? D NA 701 A HOH 257 1_555 ? ? ? ? ? ? ? 2.345 ? metalc7 metalc ? ? C NA . NA ? ? ? 1_555 E HOH . O ? ? D NA 701 D HOH 813 1_555 ? ? ? ? ? ? ? 2.284 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 39 ? GLU A 42 ? ILE A 39 GLU A 42 AA1 2 ILE A 25 ? THR A 33 ? ILE A 25 THR A 33 AA1 3 ILE A 46 ? ALA A 47 ? ILE A 46 ALA A 47 AA2 1 ILE A 39 ? GLU A 42 ? ILE A 39 GLU A 42 AA2 2 ILE A 25 ? THR A 33 ? ILE A 25 THR A 33 AA2 3 LEU A 8 ? MET A 15 ? LEU A 8 MET A 15 AA2 4 ILE A 104 ? GLY A 106 ? ILE A 104 GLY A 106 AA2 5 TYR A 131 ? ASP A 133 ? TYR A 131 ASP A 133 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ALA A 41 ? O ALA A 41 N VAL A 32 ? N VAL A 32 AA1 2 3 N MET A 28 ? N MET A 28 O ILE A 46 ? O ILE A 46 AA2 1 2 O ALA A 41 ? O ALA A 41 N VAL A 32 ? N VAL A 32 AA2 2 3 O ILE A 31 ? O ILE A 31 N TRP A 10 ? N TRP A 10 AA2 3 4 N ILE A 11 ? N ILE A 11 O CYS A 105 ? O CYS A 105 AA2 4 5 N ILE A 104 ? N ILE A 104 O ILE A 132 ? O ILE A 132 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id D _struct_site.pdbx_auth_comp_id NA _struct_site.pdbx_auth_seq_id 701 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'binding site for residue NA D 701' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 12 ? ASP A 12 . ? 1_555 ? 2 AC1 6 HOH D . ? HOH A 212 . ? 1_555 ? 3 AC1 6 HOH D . ? HOH A 257 . ? 1_555 ? 4 AC1 6 G B 1 ? G D 603 . ? 1_555 ? 5 AC1 6 C B 2 ? C D 604 . ? 1_555 ? 6 AC1 6 HOH E . ? HOH D 813 . ? 1_555 ? # _atom_sites.entry_id 6N6F _atom_sites.fract_transf_matrix[1][1] 0.011272 _atom_sites.fract_transf_matrix[1][2] 0.006508 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013016 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016728 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 PHE 3 3 3 PHE PHE A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 ASP 5 5 5 ASP ASP A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 ASN 7 7 7 ASN ASN A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 TRP 10 10 10 TRP TRP A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 MET 15 15 15 MET MET A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 MET 22 22 22 MET MET A . n A 1 23 HIS 23 23 23 HIS HIS A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 MET 28 28 28 MET MET A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 HIS 49 49 49 HIS HIS A . n A 1 50 GLN 50 50 50 GLN GLN A . n A 1 51 PRO 51 51 51 PRO PRO A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 MET 58 58 58 MET MET A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 TRP 61 61 61 TRP TRP A . n A 1 62 CYS 62 62 62 CYS CYS A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 HIS 66 66 66 HIS HIS A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 GLN 77 77 77 GLN GLN A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 GLN 79 79 79 GLN GLN A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 GLN 88 88 88 GLN GLN A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 PHE 92 92 92 PHE PHE A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 GLN 95 95 95 GLN GLN A . n A 1 96 TRP 96 96 96 TRP TRP A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 PRO 98 98 98 PRO PRO A . n A 1 99 GLU 99 99 99 GLU GLU A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 PRO 103 103 103 PRO PRO A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 CYS 105 105 105 CYS CYS A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 ASN 107 107 107 ASN ASN A . n A 1 108 SER 108 108 108 SER SER A . n A 1 109 ILE 109 109 109 ILE ILE A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 GLN 111 111 111 GLN GLN A . n A 1 112 ASP 112 112 112 ASP ASP A . n A 1 113 ARG 113 113 113 ARG ARG A . n A 1 114 ARG 114 114 114 ARG ARG A . n A 1 115 PHE 115 115 115 PHE PHE A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 TYR 117 117 117 TYR TYR A . n A 1 118 LYS 118 118 118 LYS LYS A . n A 1 119 HIS 119 119 119 HIS HIS A . n A 1 120 MET 120 120 120 MET MET A . n A 1 121 PRO 121 121 121 PRO PRO A . n A 1 122 ARG 122 122 122 ARG ARG A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 GLU 124 124 124 GLU GLU A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 TYR 126 126 126 TYR TYR A . n A 1 127 PHE 127 127 127 PHE PHE A . n A 1 128 HIS 128 128 128 HIS HIS A . n A 1 129 TYR 129 129 129 TYR TYR A . n A 1 130 ARG 130 130 130 ARG ARG A . n A 1 131 TYR 131 131 131 TYR TYR A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 ASP 133 133 133 ASP ASP A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 SER 135 135 135 SER SER A . n A 1 136 THR 136 136 136 THR THR A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 GLU 139 139 139 GLU GLU A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 THR 141 141 141 THR THR A . n A 1 142 ARG 142 142 142 ARG ARG A . n A 1 143 ARG 143 143 143 ARG ARG A . n A 1 144 TRP 144 144 144 TRP TRP A . n A 1 145 GLN 145 145 145 GLN GLN A . n A 1 146 PRO 146 146 146 PRO PRO A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 LYS 150 150 150 LYS LYS A . n A 1 151 GLU 151 151 151 GLU GLU A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 SER 153 153 153 SER SER A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 THR 155 155 155 THR THR A . n A 1 156 GLY 156 156 156 GLY GLY A . n A 1 157 SER 157 157 157 SER SER A . n A 1 158 HIS 158 158 158 HIS HIS A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 LEU 161 161 161 LEU LEU A . n A 1 162 ASP 162 162 162 ASP ASP A . n A 1 163 ASP 163 163 163 ASP ASP A . n A 1 164 ILE 164 164 164 ILE ILE A . n A 1 165 ARG 165 165 165 ARG ARG A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 SER 167 167 167 SER SER A . n A 1 168 ILE 168 168 168 ILE ILE A . n A 1 169 ALA 169 169 169 ALA ALA A . n A 1 170 GLU 170 170 170 GLU GLU A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 GLN 172 172 172 GLN GLN A . n A 1 173 PHE 173 173 173 PHE PHE A . n A 1 174 TYR 174 174 174 TYR TYR A . n A 1 175 ARG 175 175 175 ARG ARG A . n A 1 176 LYS 176 176 176 LYS LYS A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 VAL 178 178 178 VAL VAL A . n A 1 179 PHE 179 179 179 PHE PHE A . n A 1 180 LYS 180 180 180 LYS LYS A . n A 1 181 ILE 181 181 181 ILE ILE A . n B 2 1 G 1 603 603 G G D . n B 2 2 C 2 604 604 C C D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NA 1 701 1 NA NA D . D 4 HOH 1 201 222 HOH HOH A . D 4 HOH 2 202 75 HOH HOH A . D 4 HOH 3 203 66 HOH HOH A . D 4 HOH 4 204 209 HOH HOH A . D 4 HOH 5 205 104 HOH HOH A . D 4 HOH 6 206 64 HOH HOH A . D 4 HOH 7 207 39 HOH HOH A . D 4 HOH 8 208 194 HOH HOH A . D 4 HOH 9 209 103 HOH HOH A . D 4 HOH 10 210 13 HOH HOH A . D 4 HOH 11 211 61 HOH HOH A . D 4 HOH 12 212 3 HOH HOH A . D 4 HOH 13 213 125 HOH HOH A . D 4 HOH 14 214 24 HOH HOH A . D 4 HOH 15 215 65 HOH HOH A . D 4 HOH 16 216 122 HOH HOH A . D 4 HOH 17 217 25 HOH HOH A . D 4 HOH 18 218 49 HOH HOH A . D 4 HOH 19 219 146 HOH HOH A . D 4 HOH 20 220 21 HOH HOH A . D 4 HOH 21 221 112 HOH HOH A . D 4 HOH 22 222 28 HOH HOH A . D 4 HOH 23 223 63 HOH HOH A . D 4 HOH 24 224 127 HOH HOH A . D 4 HOH 25 225 20 HOH HOH A . D 4 HOH 26 226 78 HOH HOH A . D 4 HOH 27 227 94 HOH HOH A . D 4 HOH 28 228 97 HOH HOH A . D 4 HOH 29 229 184 HOH HOH A . D 4 HOH 30 230 54 HOH HOH A . D 4 HOH 31 231 137 HOH HOH A . D 4 HOH 32 232 99 HOH HOH A . D 4 HOH 33 233 84 HOH HOH A . D 4 HOH 34 234 158 HOH HOH A . D 4 HOH 35 235 48 HOH HOH A . D 4 HOH 36 236 19 HOH HOH A . D 4 HOH 37 237 110 HOH HOH A . D 4 HOH 38 238 83 HOH HOH A . D 4 HOH 39 239 80 HOH HOH A . D 4 HOH 40 240 88 HOH HOH A . D 4 HOH 41 241 57 HOH HOH A . D 4 HOH 42 242 30 HOH HOH A . D 4 HOH 43 243 71 HOH HOH A . D 4 HOH 44 244 177 HOH HOH A . D 4 HOH 45 245 58 HOH HOH A . D 4 HOH 46 246 55 HOH HOH A . D 4 HOH 47 247 23 HOH HOH A . D 4 HOH 48 248 74 HOH HOH A . D 4 HOH 49 249 130 HOH HOH A . D 4 HOH 50 250 33 HOH HOH A . D 4 HOH 51 251 213 HOH HOH A . D 4 HOH 52 252 164 HOH HOH A . D 4 HOH 53 253 86 HOH HOH A . D 4 HOH 54 254 46 HOH HOH A . D 4 HOH 55 255 77 HOH HOH A . D 4 HOH 56 256 121 HOH HOH A . D 4 HOH 57 257 1 HOH HOH A . D 4 HOH 58 258 27 HOH HOH A . D 4 HOH 59 259 91 HOH HOH A . D 4 HOH 60 260 16 HOH HOH A . D 4 HOH 61 261 43 HOH HOH A . D 4 HOH 62 262 26 HOH HOH A . D 4 HOH 63 263 38 HOH HOH A . D 4 HOH 64 264 117 HOH HOH A . D 4 HOH 65 265 182 HOH HOH A . D 4 HOH 66 266 98 HOH HOH A . D 4 HOH 67 267 167 HOH HOH A . D 4 HOH 68 268 85 HOH HOH A . D 4 HOH 69 269 76 HOH HOH A . D 4 HOH 70 270 129 HOH HOH A . D 4 HOH 71 271 68 HOH HOH A . D 4 HOH 72 272 14 HOH HOH A . D 4 HOH 73 273 221 HOH HOH A . D 4 HOH 74 274 34 HOH HOH A . D 4 HOH 75 275 156 HOH HOH A . D 4 HOH 76 276 31 HOH HOH A . D 4 HOH 77 277 18 HOH HOH A . D 4 HOH 78 278 32 HOH HOH A . D 4 HOH 79 279 166 HOH HOH A . D 4 HOH 80 280 73 HOH HOH A . D 4 HOH 81 281 7 HOH HOH A . D 4 HOH 82 282 132 HOH HOH A . D 4 HOH 83 283 124 HOH HOH A . D 4 HOH 84 284 45 HOH HOH A . D 4 HOH 85 285 81 HOH HOH A . D 4 HOH 86 286 195 HOH HOH A . D 4 HOH 87 287 72 HOH HOH A . D 4 HOH 88 288 22 HOH HOH A . D 4 HOH 89 289 181 HOH HOH A . D 4 HOH 90 290 139 HOH HOH A . D 4 HOH 91 291 193 HOH HOH A . D 4 HOH 92 292 160 HOH HOH A . D 4 HOH 93 293 118 HOH HOH A . D 4 HOH 94 294 92 HOH HOH A . D 4 HOH 95 295 138 HOH HOH A . D 4 HOH 96 296 4 HOH HOH A . D 4 HOH 97 297 169 HOH HOH A . D 4 HOH 98 298 15 HOH HOH A . D 4 HOH 99 299 107 HOH HOH A . D 4 HOH 100 300 149 HOH HOH A . D 4 HOH 101 301 44 HOH HOH A . D 4 HOH 102 302 37 HOH HOH A . D 4 HOH 103 303 108 HOH HOH A . D 4 HOH 104 304 50 HOH HOH A . D 4 HOH 105 305 41 HOH HOH A . D 4 HOH 106 306 51 HOH HOH A . D 4 HOH 107 307 5 HOH HOH A . D 4 HOH 108 308 36 HOH HOH A . D 4 HOH 109 309 47 HOH HOH A . D 4 HOH 110 310 89 HOH HOH A . D 4 HOH 111 311 180 HOH HOH A . D 4 HOH 112 312 155 HOH HOH A . D 4 HOH 113 313 29 HOH HOH A . D 4 HOH 114 314 8 HOH HOH A . D 4 HOH 115 315 52 HOH HOH A . D 4 HOH 116 316 40 HOH HOH A . D 4 HOH 117 317 126 HOH HOH A . D 4 HOH 118 318 35 HOH HOH A . D 4 HOH 119 319 113 HOH HOH A . D 4 HOH 120 320 226 HOH HOH A . D 4 HOH 121 321 131 HOH HOH A . D 4 HOH 122 322 185 HOH HOH A . D 4 HOH 123 323 70 HOH HOH A . D 4 HOH 124 324 145 HOH HOH A . D 4 HOH 125 325 153 HOH HOH A . D 4 HOH 126 326 56 HOH HOH A . D 4 HOH 127 327 109 HOH HOH A . D 4 HOH 128 328 42 HOH HOH A . D 4 HOH 129 329 173 HOH HOH A . D 4 HOH 130 330 100 HOH HOH A . D 4 HOH 131 331 175 HOH HOH A . D 4 HOH 132 332 69 HOH HOH A . D 4 HOH 133 333 96 HOH HOH A . D 4 HOH 134 334 211 HOH HOH A . D 4 HOH 135 335 214 HOH HOH A . D 4 HOH 136 336 154 HOH HOH A . D 4 HOH 137 337 128 HOH HOH A . D 4 HOH 138 338 152 HOH HOH A . D 4 HOH 139 339 216 HOH HOH A . D 4 HOH 140 340 120 HOH HOH A . D 4 HOH 141 341 67 HOH HOH A . D 4 HOH 142 342 133 HOH HOH A . D 4 HOH 143 343 12 HOH HOH A . D 4 HOH 144 344 223 HOH HOH A . D 4 HOH 145 345 165 HOH HOH A . D 4 HOH 146 346 200 HOH HOH A . D 4 HOH 147 347 190 HOH HOH A . D 4 HOH 148 348 163 HOH HOH A . D 4 HOH 149 349 225 HOH HOH A . D 4 HOH 150 350 183 HOH HOH A . D 4 HOH 151 351 174 HOH HOH A . D 4 HOH 152 352 147 HOH HOH A . D 4 HOH 153 353 212 HOH HOH A . D 4 HOH 154 354 116 HOH HOH A . D 4 HOH 155 355 191 HOH HOH A . D 4 HOH 156 356 208 HOH HOH A . D 4 HOH 157 357 114 HOH HOH A . D 4 HOH 158 358 123 HOH HOH A . D 4 HOH 159 359 210 HOH HOH A . D 4 HOH 160 360 162 HOH HOH A . D 4 HOH 161 361 220 HOH HOH A . D 4 HOH 162 362 178 HOH HOH A . D 4 HOH 163 363 144 HOH HOH A . D 4 HOH 164 364 136 HOH HOH A . D 4 HOH 165 365 219 HOH HOH A . D 4 HOH 166 366 151 HOH HOH A . D 4 HOH 167 367 101 HOH HOH A . D 4 HOH 168 368 148 HOH HOH A . D 4 HOH 169 369 82 HOH HOH A . D 4 HOH 170 370 141 HOH HOH A . D 4 HOH 171 371 197 HOH HOH A . D 4 HOH 172 372 87 HOH HOH A . D 4 HOH 173 373 157 HOH HOH A . D 4 HOH 174 374 218 HOH HOH A . D 4 HOH 175 375 188 HOH HOH A . D 4 HOH 176 376 106 HOH HOH A . D 4 HOH 177 377 102 HOH HOH A . D 4 HOH 178 378 227 HOH HOH A . D 4 HOH 179 379 143 HOH HOH A . D 4 HOH 180 380 199 HOH HOH A . D 4 HOH 181 381 93 HOH HOH A . D 4 HOH 182 382 187 HOH HOH A . D 4 HOH 183 383 207 HOH HOH A . D 4 HOH 184 384 224 HOH HOH A . D 4 HOH 185 385 203 HOH HOH A . D 4 HOH 186 386 95 HOH HOH A . D 4 HOH 187 387 192 HOH HOH A . D 4 HOH 188 388 135 HOH HOH A . D 4 HOH 189 389 79 HOH HOH A . D 4 HOH 190 390 62 HOH HOH A . D 4 HOH 191 391 170 HOH HOH A . D 4 HOH 192 392 119 HOH HOH A . D 4 HOH 193 393 206 HOH HOH A . D 4 HOH 194 394 59 HOH HOH A . D 4 HOH 195 395 204 HOH HOH A . D 4 HOH 196 396 179 HOH HOH A . D 4 HOH 197 397 105 HOH HOH A . D 4 HOH 198 398 196 HOH HOH A . D 4 HOH 199 399 90 HOH HOH A . D 4 HOH 200 400 134 HOH HOH A . D 4 HOH 201 401 60 HOH HOH A . D 4 HOH 202 402 168 HOH HOH A . D 4 HOH 203 403 189 HOH HOH A . D 4 HOH 204 404 202 HOH HOH A . D 4 HOH 205 405 205 HOH HOH A . D 4 HOH 206 406 150 HOH HOH A . E 4 HOH 1 801 111 HOH HOH D . E 4 HOH 2 802 17 HOH HOH D . E 4 HOH 3 803 186 HOH HOH D . E 4 HOH 4 804 9 HOH HOH D . E 4 HOH 5 805 6 HOH HOH D . E 4 HOH 6 806 159 HOH HOH D . E 4 HOH 7 807 115 HOH HOH D . E 4 HOH 8 808 53 HOH HOH D . E 4 HOH 9 809 201 HOH HOH D . E 4 HOH 10 810 10 HOH HOH D . E 4 HOH 11 811 142 HOH HOH D . E 4 HOH 12 812 172 HOH HOH D . E 4 HOH 13 813 2 HOH HOH D . E 4 HOH 14 814 198 HOH HOH D . E 4 HOH 15 815 176 HOH HOH D . E 4 HOH 16 816 171 HOH HOH D . E 4 HOH 17 817 11 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1040 ? 1 MORE -24 ? 1 'SSA (A^2)' 9110 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 405 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 12 ? A ASP 12 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 "O3'" A B G 1 ? D G 603 ? 1_555 157.8 ? 2 OD1 ? A ASP 12 ? A ASP 12 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 "O3'" B B G 1 ? D G 603 ? 1_555 157.7 ? 3 "O3'" A B G 1 ? D G 603 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 "O3'" B B G 1 ? D G 603 ? 1_555 0.1 ? 4 OD1 ? A ASP 12 ? A ASP 12 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 OP1 ? B C 2 ? D C 604 ? 1_555 104.1 ? 5 "O3'" A B G 1 ? D G 603 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 OP1 ? B C 2 ? D C 604 ? 1_555 58.7 ? 6 "O3'" B B G 1 ? D G 603 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 OP1 ? B C 2 ? D C 604 ? 1_555 58.7 ? 7 OD1 ? A ASP 12 ? A ASP 12 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 O ? D HOH . ? A HOH 212 ? 1_555 89.0 ? 8 "O3'" A B G 1 ? D G 603 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 O ? D HOH . ? A HOH 212 ? 1_555 109.0 ? 9 "O3'" B B G 1 ? D G 603 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 O ? D HOH . ? A HOH 212 ? 1_555 109.0 ? 10 OP1 ? B C 2 ? D C 604 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 O ? D HOH . ? A HOH 212 ? 1_555 166.7 ? 11 OD1 ? A ASP 12 ? A ASP 12 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 O ? D HOH . ? A HOH 257 ? 1_555 82.7 ? 12 "O3'" A B G 1 ? D G 603 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 O ? D HOH . ? A HOH 257 ? 1_555 85.1 ? 13 "O3'" B B G 1 ? D G 603 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 O ? D HOH . ? A HOH 257 ? 1_555 85.0 ? 14 OP1 ? B C 2 ? D C 604 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 O ? D HOH . ? A HOH 257 ? 1_555 95.8 ? 15 O ? D HOH . ? A HOH 212 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 O ? D HOH . ? A HOH 257 ? 1_555 87.6 ? 16 OD1 ? A ASP 12 ? A ASP 12 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 O ? E HOH . ? D HOH 813 ? 1_555 91.0 ? 17 "O3'" A B G 1 ? D G 603 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 O ? E HOH . ? D HOH 813 ? 1_555 101.2 ? 18 "O3'" B B G 1 ? D G 603 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 O ? E HOH . ? D HOH 813 ? 1_555 101.3 ? 19 OP1 ? B C 2 ? D C 604 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 O ? E HOH . ? D HOH 813 ? 1_555 86.7 ? 20 O ? D HOH . ? A HOH 212 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 O ? E HOH . ? D HOH 813 ? 1_555 91.3 ? 21 O ? D HOH . ? A HOH 257 ? 1_555 NA ? C NA . ? D NA 701 ? 1_555 O ? E HOH . ? D HOH 813 ? 1_555 173.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-06-12 2 'Structure model' 1 1 2019-10-16 3 'Structure model' 1 2 2020-01-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Author supporting evidence' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' pdbx_audit_support # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 3 'Structure model' '_pdbx_audit_support.funding_organization' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -44.372 6.478 1.428 0.2717 0.1483 0.2069 -0.0266 0.0200 -0.0077 4.2953 3.6236 2.4181 -1.2361 -1.0407 0.7468 -0.2225 0.1080 0.1200 0.0030 -0.2328 -0.1361 -0.1712 0.2402 0.0335 'X-RAY DIFFRACTION' 2 ? refined -47.084 13.746 -2.343 0.2762 0.2041 0.1775 -0.0212 -0.0007 0.0010 3.1969 2.2110 2.8082 -1.0243 -1.8116 0.6439 0.0065 -0.0559 0.0443 0.3421 -0.0087 0.0531 -0.3351 -0.0810 -0.2543 'X-RAY DIFFRACTION' 3 ? refined -34.902 6.163 6.521 0.2541 0.2166 0.2810 -0.0267 0.0441 -0.0194 2.4515 1.6647 1.5584 -0.8425 0.8058 -1.0410 -0.1003 -0.0580 0.1727 -0.0711 -0.0170 -0.3328 -0.0002 -0.1086 0.1278 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 2 A 24 '( CHAIN A AND RESID 2:24 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 25 A 99 '( CHAIN A AND RESID 25:99 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 100 A 181 '( CHAIN A AND RESID 100:181 )' ? ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? 3.3.22 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.14_3260 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P D G 603 ? A OP3 D G 603 ? A 1.482 1.607 -0.125 0.012 N 2 1 P D G 603 ? B OP3 D G 603 ? B 1.482 1.607 -0.125 0.012 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 120 ? ? -142.66 55.42 2 1 GLN A 145 ? ? -156.93 73.67 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 406 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.84 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id MET _pdbx_unobs_or_zero_occ_residues.auth_seq_id 1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id MET _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number R01GM123609 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SODIUM ION' NA 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details ? #