data_6N9H # _entry.id 6N9H # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6N9H pdb_00006n9h 10.2210/pdb6n9h/pdb WWPDB D_1000238300 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-12-18 2 'Structure model' 1 1 2020-01-01 3 'Structure model' 1 2 2024-03-13 4 'Structure model' 1 3 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_struct_conn_angle 7 3 'Structure model' struct_conn 8 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.year' 9 2 'Structure model' '_citation_author.identifier_ORCID' 10 2 'Structure model' '_citation_author.name' 11 3 'Structure model' '_database_2.pdbx_DOI' 12 3 'Structure model' '_database_2.pdbx_database_accession' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 23 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 24 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 25 3 'Structure model' '_pdbx_struct_conn_angle.value' 26 3 'Structure model' '_struct_conn.pdbx_dist_value' 27 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 28 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 33 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 3 'Structure model' '_struct_conn.ptnr2_symmetry' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6N9H _pdbx_database_status.recvd_initial_deposition_date 2018-12-03 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Park, J.' 1 0000-0001-8557-641X 'Baker, D.' 2 0000-0001-7896-6217 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Elife _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2050-084X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 8 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'De novo design of a homo-trimeric amantadine-binding protein.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.7554/eLife.47839 _citation.pdbx_database_id_PubMed 31854299 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Park, J.' 1 0000-0001-8557-641X primary 'Selvaraj, B.' 2 ? primary 'McShan, A.C.' 3 0000-0002-3212-9867 primary 'Boyken, S.E.' 4 0000-0002-5378-0632 primary 'Wei, K.Y.' 5 0000-0002-8794-1385 primary 'Oberdorfer, G.' 6 ? primary 'DeGrado, W.' 7 ? primary 'Sgourakis, N.G.' 8 0000-0003-3655-3902 primary 'Cuneo, M.J.' 9 0000-0002-1475-6656 primary 'Myles, D.A.' 10 0000-0002-7693-4964 primary 'Baker, D.' 11 0000-0001-7896-6217 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'amantadine-binding protein' 9139.512 1 ? ? ? ? 2 non-polymer syn '(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]decan-1-amine' 151.249 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 water nat water 18.015 117 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ABP # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSHMGDAQDKLKYLVKQLERALRELKKSLDELERSLEELEKNPSEDALVENNRLNVENNKIIVEVLRIILELAKASAKLA _entity_poly.pdbx_seq_one_letter_code_can GSHMGDAQDKLKYLVKQLERALRELKKSLDELERSLEELEKNPSEDALVENNRLNVENNKIIVEVLRIILELAKASAKLA _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]decan-1-amine' 308 3 'SODIUM ION' NA 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLY n 1 6 ASP n 1 7 ALA n 1 8 GLN n 1 9 ASP n 1 10 LYS n 1 11 LEU n 1 12 LYS n 1 13 TYR n 1 14 LEU n 1 15 VAL n 1 16 LYS n 1 17 GLN n 1 18 LEU n 1 19 GLU n 1 20 ARG n 1 21 ALA n 1 22 LEU n 1 23 ARG n 1 24 GLU n 1 25 LEU n 1 26 LYS n 1 27 LYS n 1 28 SER n 1 29 LEU n 1 30 ASP n 1 31 GLU n 1 32 LEU n 1 33 GLU n 1 34 ARG n 1 35 SER n 1 36 LEU n 1 37 GLU n 1 38 GLU n 1 39 LEU n 1 40 GLU n 1 41 LYS n 1 42 ASN n 1 43 PRO n 1 44 SER n 1 45 GLU n 1 46 ASP n 1 47 ALA n 1 48 LEU n 1 49 VAL n 1 50 GLU n 1 51 ASN n 1 52 ASN n 1 53 ARG n 1 54 LEU n 1 55 ASN n 1 56 VAL n 1 57 GLU n 1 58 ASN n 1 59 ASN n 1 60 LYS n 1 61 ILE n 1 62 ILE n 1 63 VAL n 1 64 GLU n 1 65 VAL n 1 66 LEU n 1 67 ARG n 1 68 ILE n 1 69 ILE n 1 70 LEU n 1 71 GLU n 1 72 LEU n 1 73 ALA n 1 74 LYS n 1 75 ALA n 1 76 SER n 1 77 ALA n 1 78 LYS n 1 79 LEU n 1 80 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 80 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'synthetic construct' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 Star(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET28b(+)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 308 non-polymer . '(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]decan-1-amine' Amantadine 'C10 H17 N' 151.249 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -4 ? ? ? A . n A 1 2 SER 2 -3 ? ? ? A . n A 1 3 HIS 3 -2 ? ? ? A . n A 1 4 MET 4 -1 ? ? ? A . n A 1 5 GLY 5 0 ? ? ? A . n A 1 6 ASP 6 1 1 ASP ASP A . n A 1 7 ALA 7 2 2 ALA ALA A . n A 1 8 GLN 8 3 3 GLN GLN A . n A 1 9 ASP 9 4 4 ASP ASP A . n A 1 10 LYS 10 5 5 LYS LYS A . n A 1 11 LEU 11 6 6 LEU LEU A . n A 1 12 LYS 12 7 7 LYS LYS A . n A 1 13 TYR 13 8 8 TYR TYR A . n A 1 14 LEU 14 9 9 LEU LEU A . n A 1 15 VAL 15 10 10 VAL VAL A . n A 1 16 LYS 16 11 11 LYS LYS A . n A 1 17 GLN 17 12 12 GLN GLN A . n A 1 18 LEU 18 13 13 LEU LEU A . n A 1 19 GLU 19 14 14 GLU GLU A . n A 1 20 ARG 20 15 15 ARG ARG A . n A 1 21 ALA 21 16 16 ALA ALA A . n A 1 22 LEU 22 17 17 LEU LEU A . n A 1 23 ARG 23 18 18 ARG ARG A . n A 1 24 GLU 24 19 19 GLU GLU A . n A 1 25 LEU 25 20 20 LEU LEU A . n A 1 26 LYS 26 21 21 LYS LYS A . n A 1 27 LYS 27 22 22 LYS LYS A . n A 1 28 SER 28 23 23 SER SER A . n A 1 29 LEU 29 24 24 LEU LEU A . n A 1 30 ASP 30 25 25 ASP ASP A . n A 1 31 GLU 31 26 26 GLU GLU A . n A 1 32 LEU 32 27 27 LEU LEU A . n A 1 33 GLU 33 28 28 GLU GLU A . n A 1 34 ARG 34 29 29 ARG ARG A . n A 1 35 SER 35 30 30 SER SER A . n A 1 36 LEU 36 31 31 LEU LEU A . n A 1 37 GLU 37 32 32 GLU GLU A . n A 1 38 GLU 38 33 33 GLU GLU A . n A 1 39 LEU 39 34 34 LEU LEU A . n A 1 40 GLU 40 35 35 GLU GLU A . n A 1 41 LYS 41 36 36 LYS LYS A . n A 1 42 ASN 42 37 37 ASN ASN A . n A 1 43 PRO 43 38 38 PRO PRO A . n A 1 44 SER 44 39 39 SER SER A . n A 1 45 GLU 45 40 40 GLU GLU A . n A 1 46 ASP 46 41 41 ASP ASP A . n A 1 47 ALA 47 42 42 ALA ALA A . n A 1 48 LEU 48 43 43 LEU LEU A . n A 1 49 VAL 49 44 44 VAL VAL A . n A 1 50 GLU 50 45 45 GLU GLU A . n A 1 51 ASN 51 46 46 ASN ASN A . n A 1 52 ASN 52 47 47 ASN ASN A . n A 1 53 ARG 53 48 48 ARG ARG A . n A 1 54 LEU 54 49 49 LEU LEU A . n A 1 55 ASN 55 50 50 ASN ASN A . n A 1 56 VAL 56 51 51 VAL VAL A . n A 1 57 GLU 57 52 52 GLU GLU A . n A 1 58 ASN 58 53 53 ASN ASN A . n A 1 59 ASN 59 54 54 ASN ASN A . n A 1 60 LYS 60 55 55 LYS LYS A . n A 1 61 ILE 61 56 56 ILE ILE A . n A 1 62 ILE 62 57 57 ILE ILE A . n A 1 63 VAL 63 58 58 VAL VAL A . n A 1 64 GLU 64 59 59 GLU GLU A . n A 1 65 VAL 65 60 60 VAL VAL A . n A 1 66 LEU 66 61 61 LEU LEU A . n A 1 67 ARG 67 62 62 ARG ARG A . n A 1 68 ILE 68 63 63 ILE ILE A . n A 1 69 ILE 69 64 64 ILE ILE A . n A 1 70 LEU 70 65 65 LEU LEU A . n A 1 71 GLU 71 66 66 GLU GLU A . n A 1 72 LEU 72 67 67 LEU LEU A . n A 1 73 ALA 73 68 68 ALA ALA A . n A 1 74 LYS 74 69 69 LYS LYS A . n A 1 75 ALA 75 70 70 ALA ALA A . n A 1 76 SER 76 71 71 SER SER A . n A 1 77 ALA 77 72 72 ALA ALA A . n A 1 78 LYS 78 73 73 LYS LYS A . n A 1 79 LEU 79 74 74 LEU LEU A . n A 1 80 ALA 80 75 75 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 308 1 101 1 308 AMA A . C 3 NA 1 102 1 NA NA A . D 4 HOH 1 201 117 HOH HOH A . D 4 HOH 2 202 97 HOH HOH A . D 4 HOH 3 203 94 HOH HOH A . D 4 HOH 4 204 103 HOH HOH A . D 4 HOH 5 205 90 HOH HOH A . D 4 HOH 6 206 15 HOH HOH A . D 4 HOH 7 207 96 HOH HOH A . D 4 HOH 8 208 3 HOH HOH A . D 4 HOH 9 209 61 HOH HOH A . D 4 HOH 10 210 22 HOH HOH A . D 4 HOH 11 211 18 HOH HOH A . D 4 HOH 12 212 27 HOH HOH A . D 4 HOH 13 213 39 HOH HOH A . D 4 HOH 14 214 64 HOH HOH A . D 4 HOH 15 215 36 HOH HOH A . D 4 HOH 16 216 67 HOH HOH A . D 4 HOH 17 217 4 HOH HOH A . D 4 HOH 18 218 9 HOH HOH A . D 4 HOH 19 219 12 HOH HOH A . D 4 HOH 20 220 37 HOH HOH A . D 4 HOH 21 221 13 HOH HOH A . D 4 HOH 22 222 10 HOH HOH A . D 4 HOH 23 223 60 HOH HOH A . D 4 HOH 24 224 104 HOH HOH A . D 4 HOH 25 225 114 HOH HOH A . D 4 HOH 26 226 48 HOH HOH A . D 4 HOH 27 227 112 HOH HOH A . D 4 HOH 28 228 14 HOH HOH A . D 4 HOH 29 229 95 HOH HOH A . D 4 HOH 30 230 7 HOH HOH A . D 4 HOH 31 231 40 HOH HOH A . D 4 HOH 32 232 21 HOH HOH A . D 4 HOH 33 233 8 HOH HOH A . D 4 HOH 34 234 5 HOH HOH A . D 4 HOH 35 235 2 HOH HOH A . D 4 HOH 36 236 50 HOH HOH A . D 4 HOH 37 237 23 HOH HOH A . D 4 HOH 38 238 63 HOH HOH A . D 4 HOH 39 239 69 HOH HOH A . D 4 HOH 40 240 1 HOH HOH A . D 4 HOH 41 241 17 HOH HOH A . D 4 HOH 42 242 11 HOH HOH A . D 4 HOH 43 243 33 HOH HOH A . D 4 HOH 44 244 16 HOH HOH A . D 4 HOH 45 245 28 HOH HOH A . D 4 HOH 46 246 58 HOH HOH A . D 4 HOH 47 247 6 HOH HOH A . D 4 HOH 48 248 102 HOH HOH A . D 4 HOH 49 249 19 HOH HOH A . D 4 HOH 50 250 47 HOH HOH A . D 4 HOH 51 251 74 HOH HOH A . D 4 HOH 52 252 79 HOH HOH A . D 4 HOH 53 253 24 HOH HOH A . D 4 HOH 54 254 34 HOH HOH A . D 4 HOH 55 255 29 HOH HOH A . D 4 HOH 56 256 49 HOH HOH A . D 4 HOH 57 257 42 HOH HOH A . D 4 HOH 58 258 62 HOH HOH A . D 4 HOH 59 259 65 HOH HOH A . D 4 HOH 60 260 86 HOH HOH A . D 4 HOH 61 261 91 HOH HOH A . D 4 HOH 62 262 55 HOH HOH A . D 4 HOH 63 263 44 HOH HOH A . D 4 HOH 64 264 20 HOH HOH A . D 4 HOH 65 265 82 HOH HOH A . D 4 HOH 66 266 66 HOH HOH A . D 4 HOH 67 267 109 HOH HOH A . D 4 HOH 68 268 87 HOH HOH A . D 4 HOH 69 269 68 HOH HOH A . D 4 HOH 70 270 31 HOH HOH A . D 4 HOH 71 271 93 HOH HOH A . D 4 HOH 72 272 101 HOH HOH A . D 4 HOH 73 273 70 HOH HOH A . D 4 HOH 74 274 115 HOH HOH A . D 4 HOH 75 275 106 HOH HOH A . D 4 HOH 76 276 85 HOH HOH A . D 4 HOH 77 277 59 HOH HOH A . D 4 HOH 78 278 46 HOH HOH A . D 4 HOH 79 279 92 HOH HOH A . D 4 HOH 80 280 89 HOH HOH A . D 4 HOH 81 281 43 HOH HOH A . D 4 HOH 82 282 78 HOH HOH A . D 4 HOH 83 283 72 HOH HOH A . D 4 HOH 84 284 45 HOH HOH A . D 4 HOH 85 285 81 HOH HOH A . D 4 HOH 86 286 38 HOH HOH A . D 4 HOH 87 287 53 HOH HOH A . D 4 HOH 88 288 76 HOH HOH A . D 4 HOH 89 289 113 HOH HOH A . D 4 HOH 90 290 80 HOH HOH A . D 4 HOH 91 291 57 HOH HOH A . D 4 HOH 92 292 32 HOH HOH A . D 4 HOH 93 293 73 HOH HOH A . D 4 HOH 94 294 30 HOH HOH A . D 4 HOH 95 295 84 HOH HOH A . D 4 HOH 96 296 77 HOH HOH A . D 4 HOH 97 297 26 HOH HOH A . D 4 HOH 98 298 54 HOH HOH A . D 4 HOH 99 299 111 HOH HOH A . D 4 HOH 100 300 98 HOH HOH A . D 4 HOH 101 301 100 HOH HOH A . D 4 HOH 102 302 105 HOH HOH A . D 4 HOH 103 303 41 HOH HOH A . D 4 HOH 104 304 107 HOH HOH A . D 4 HOH 105 305 71 HOH HOH A . D 4 HOH 106 306 56 HOH HOH A . D 4 HOH 107 307 75 HOH HOH A . D 4 HOH 108 308 25 HOH HOH A . D 4 HOH 109 309 35 HOH HOH A . D 4 HOH 110 310 116 HOH HOH A . D 4 HOH 111 311 52 HOH HOH A . D 4 HOH 112 312 108 HOH HOH A . D 4 HOH 113 313 83 HOH HOH A . D 4 HOH 114 314 88 HOH HOH A . D 4 HOH 115 315 99 HOH HOH A . D 4 HOH 116 316 51 HOH HOH A . D 4 HOH 117 317 110 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? dev_1616 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 6N9H _cell.details ? _cell.formula_units_Z ? _cell.length_a 49.986 _cell.length_a_esd ? _cell.length_b 49.986 _cell.length_b_esd ? _cell.length_c 67.339 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N9H _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6N9H _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.66 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 53.77 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M citric acid, pH 4.0, 20% PEG6000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-02-11 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Rosenbaum-Rock double crystal Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97926 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97926 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6N9H _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.039 _reflns.d_resolution_low 23.431 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 45841 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 18.9 _reflns.pdbx_Rmerge_I_obs 0.056 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 62.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.0392 _reflns_shell.d_res_low 1.0651 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2897 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.263 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6N9H _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.039 _refine.ls_d_res_low 23.431 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 42644 _refine.ls_number_reflns_R_free 1993 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 92.98 _refine.ls_percent_reflns_R_free 4.67 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1972 _refine.ls_R_factor_R_free 0.2139 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1964 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'De novo design model ABP' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 21.97 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.07 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 607 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 117 _refine_hist.number_atoms_total 736 _refine_hist.d_res_high 1.039 _refine_hist.d_res_low 23.431 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.014 ? 625 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.371 ? 842 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 12.851 ? 253 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.075 ? 104 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 ? 106 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.0392 1.0651 . . 85 1818 58.00 . . . 0.2211 . 0.2327 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.0651 1.0939 . . 101 2146 69.00 . . . 0.2059 . 0.2099 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.0939 1.1261 . . 134 2605 84.00 . . . 0.1932 . 0.1937 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.1261 1.1625 . . 141 2932 94.00 . . . 0.2048 . 0.1979 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.1625 1.2040 . . 150 3050 98.00 . . . 0.2095 . 0.1987 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.2040 1.2522 . . 147 3086 99.00 . . . 0.2071 . 0.2012 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.2522 1.3092 . . 156 3111 100.00 . . . 0.1881 . 0.2022 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.3092 1.3782 . . 151 3105 100.00 . . . 0.2205 . 0.2030 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.3782 1.4646 . . 152 3125 100.00 . . . 0.2341 . 0.1993 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.4646 1.5776 . . 154 3120 100.00 . . . 0.2169 . 0.1900 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5776 1.7364 . . 151 3126 100.00 . . . 0.1985 . 0.1986 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7364 1.9875 . . 155 3126 100.00 . . . 0.2207 . 0.2065 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9875 2.5036 . . 154 3141 100.00 . . . 0.2067 . 0.1908 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5036 23.4371 . . 162 3160 100.00 . . . 0.2189 . 0.1950 . . . . . . . . . . # _struct.entry_id 6N9H _struct.title 'De novo designed homo-trimeric amantadine-binding protein' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6N9H _struct_keywords.text 'helical bundle, trimer, amantadine-binding protein, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6N9H _struct_ref.pdbx_db_accession 6N9H _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6N9H _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 80 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6N9H _struct_ref_seq.db_align_beg -4 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 75 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -4 _struct_ref_seq.pdbx_auth_seq_align_end 75 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6430 ? 1 MORE -68 ? 1 'SSA (A^2)' 11880 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5000000000 -0.8660254038 0.0000000000 24.9930000000 0.8660254038 -0.5000000000 0.0000000000 -43.2891458336 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5000000000 0.8660254038 0.0000000000 49.9860000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 6 ? ASN A 42 ? ASP A 1 ASN A 37 1 ? 37 HELX_P HELX_P2 AA2 SER A 44 ? ALA A 80 ? SER A 39 ALA A 75 1 ? 37 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASN 52 OD1 ? ? ? 1_555 C NA . NA ? ? A ASN 47 A NA 102 1_555 ? ? ? ? ? ? ? 2.504 ? ? metalc2 metalc ? ? A ASN 52 OD1 ? ? ? 1_555 C NA . NA ? ? A ASN 47 A NA 102 3_655 ? ? ? ? ? ? ? 2.489 ? ? metalc3 metalc ? ? C NA . NA ? ? ? 1_555 D HOH . O ? ? A NA 102 A HOH 240 1_555 ? ? ? ? ? ? ? 2.379 ? ? metalc4 metalc ? ? C NA . NA ? ? ? 1_555 D HOH . O ? ? A NA 102 A HOH 240 2_545 ? ? ? ? ? ? ? 2.354 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASN 52 ? A ASN 47 ? 1_555 NA ? C NA . ? A NA 102 ? 1_555 OD1 ? A ASN 52 ? A ASN 47 ? 1_555 0.0 ? 2 OD1 ? A ASN 52 ? A ASN 47 ? 1_555 NA ? C NA . ? A NA 102 ? 1_555 O ? D HOH . ? A HOH 240 ? 1_555 88.6 ? 3 OD1 ? A ASN 52 ? A ASN 47 ? 1_555 NA ? C NA . ? A NA 102 ? 1_555 O ? D HOH . ? A HOH 240 ? 1_555 88.6 ? 4 OD1 ? A ASN 52 ? A ASN 47 ? 1_555 NA ? C NA . ? A NA 102 ? 1_555 O ? D HOH . ? A HOH 240 ? 2_545 85.6 ? 5 OD1 ? A ASN 52 ? A ASN 47 ? 1_555 NA ? C NA . ? A NA 102 ? 1_555 O ? D HOH . ? A HOH 240 ? 2_545 85.6 ? 6 O ? D HOH . ? A HOH 240 ? 1_555 NA ? C NA . ? A NA 102 ? 1_555 O ? D HOH . ? A HOH 240 ? 2_545 100.0 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 308 101 ? 3 'binding site for residue 308 A 101' AC2 Software A NA 102 ? 6 'binding site for residue NA A 102' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 HOH D . ? HOH A 218 . ? 1_555 ? 2 AC1 3 HOH D . ? HOH A 218 . ? 2_545 ? 3 AC1 3 HOH D . ? HOH A 218 . ? 3_655 ? 4 AC2 6 ASN A 52 ? ASN A 47 . ? 1_555 ? 5 AC2 6 ASN A 52 ? ASN A 47 . ? 2_545 ? 6 AC2 6 ASN A 52 ? ASN A 47 . ? 3_655 ? 7 AC2 6 HOH D . ? HOH A 240 . ? 3_655 ? 8 AC2 6 HOH D . ? HOH A 240 . ? 2_545 ? 9 AC2 6 HOH D . ? HOH A 240 . ? 1_555 ? # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A 308 101 ? B 308 . 2 1 A 308 101 ? B 308 . 3 1 A NA 102 ? C NA . 4 1 A HOH 310 ? D HOH . # _pdbx_entry_details.compound_details ? _pdbx_entry_details.entry_id 6N9H _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.nonpolymer_details 'Structure contains cationic amantadinium (ligand 308).' _pdbx_entry_details.sequence_details ? _pdbx_entry_details.source_details ? # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 317 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.28 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -4 ? A GLY 1 2 1 Y 1 A SER -3 ? A SER 2 3 1 Y 1 A HIS -2 ? A HIS 3 4 1 Y 1 A MET -1 ? A MET 4 5 1 Y 1 A GLY 0 ? A GLY 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 308 N1 N N N 1 308 C10 C N N 2 308 C7 C N N 3 308 C1 C N N 4 308 C8 C N N 5 308 C5 C N N 6 308 C6 C N N 7 308 C4 C N N 8 308 C9 C N N 9 308 C3 C N N 10 308 C2 C N N 11 308 HN1 H N N 12 308 HN1A H N N 13 308 H7 H N N 14 308 H7A H N N 15 308 H1 H N N 16 308 H8 H N N 17 308 H8A H N N 18 308 H5 H N N 19 308 H6 H N N 20 308 H6A H N N 21 308 H4 H N N 22 308 H4A H N N 23 308 H9 H N N 24 308 H9A H N N 25 308 H3 H N N 26 308 H2 H N N 27 308 H2A H N N 28 ALA N N N N 29 ALA CA C N S 30 ALA C C N N 31 ALA O O N N 32 ALA CB C N N 33 ALA OXT O N N 34 ALA H H N N 35 ALA H2 H N N 36 ALA HA H N N 37 ALA HB1 H N N 38 ALA HB2 H N N 39 ALA HB3 H N N 40 ALA HXT H N N 41 ARG N N N N 42 ARG CA C N S 43 ARG C C N N 44 ARG O O N N 45 ARG CB C N N 46 ARG CG C N N 47 ARG CD C N N 48 ARG NE N N N 49 ARG CZ C N N 50 ARG NH1 N N N 51 ARG NH2 N N N 52 ARG OXT O N N 53 ARG H H N N 54 ARG H2 H N N 55 ARG HA H N N 56 ARG HB2 H N N 57 ARG HB3 H N N 58 ARG HG2 H N N 59 ARG HG3 H N N 60 ARG HD2 H N N 61 ARG HD3 H N N 62 ARG HE H N N 63 ARG HH11 H N N 64 ARG HH12 H N N 65 ARG HH21 H N N 66 ARG HH22 H N N 67 ARG HXT H N N 68 ASN N N N N 69 ASN CA C N S 70 ASN C C N N 71 ASN O O N N 72 ASN CB C N N 73 ASN CG C N N 74 ASN OD1 O N N 75 ASN ND2 N N N 76 ASN OXT O N N 77 ASN H H N N 78 ASN H2 H N N 79 ASN HA H N N 80 ASN HB2 H N N 81 ASN HB3 H N N 82 ASN HD21 H N N 83 ASN HD22 H N N 84 ASN HXT H N N 85 ASP N N N N 86 ASP CA C N S 87 ASP C C N N 88 ASP O O N N 89 ASP CB C N N 90 ASP CG C N N 91 ASP OD1 O N N 92 ASP OD2 O N N 93 ASP OXT O N N 94 ASP H H N N 95 ASP H2 H N N 96 ASP HA H N N 97 ASP HB2 H N N 98 ASP HB3 H N N 99 ASP HD2 H N N 100 ASP HXT H N N 101 GLN N N N N 102 GLN CA C N S 103 GLN C C N N 104 GLN O O N N 105 GLN CB C N N 106 GLN CG C N N 107 GLN CD C N N 108 GLN OE1 O N N 109 GLN NE2 N N N 110 GLN OXT O N N 111 GLN H H N N 112 GLN H2 H N N 113 GLN HA H N N 114 GLN HB2 H N N 115 GLN HB3 H N N 116 GLN HG2 H N N 117 GLN HG3 H N N 118 GLN HE21 H N N 119 GLN HE22 H N N 120 GLN HXT H N N 121 GLU N N N N 122 GLU CA C N S 123 GLU C C N N 124 GLU O O N N 125 GLU CB C N N 126 GLU CG C N N 127 GLU CD C N N 128 GLU OE1 O N N 129 GLU OE2 O N N 130 GLU OXT O N N 131 GLU H H N N 132 GLU H2 H N N 133 GLU HA H N N 134 GLU HB2 H N N 135 GLU HB3 H N N 136 GLU HG2 H N N 137 GLU HG3 H N N 138 GLU HE2 H N N 139 GLU HXT H N N 140 GLY N N N N 141 GLY CA C N N 142 GLY C C N N 143 GLY O O N N 144 GLY OXT O N N 145 GLY H H N N 146 GLY H2 H N N 147 GLY HA2 H N N 148 GLY HA3 H N N 149 GLY HXT H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 NA NA NA N N 264 PRO N N N N 265 PRO CA C N S 266 PRO C C N N 267 PRO O O N N 268 PRO CB C N N 269 PRO CG C N N 270 PRO CD C N N 271 PRO OXT O N N 272 PRO H H N N 273 PRO HA H N N 274 PRO HB2 H N N 275 PRO HB3 H N N 276 PRO HG2 H N N 277 PRO HG3 H N N 278 PRO HD2 H N N 279 PRO HD3 H N N 280 PRO HXT H N N 281 SER N N N N 282 SER CA C N S 283 SER C C N N 284 SER O O N N 285 SER CB C N N 286 SER OG O N N 287 SER OXT O N N 288 SER H H N N 289 SER H2 H N N 290 SER HA H N N 291 SER HB2 H N N 292 SER HB3 H N N 293 SER HG H N N 294 SER HXT H N N 295 TYR N N N N 296 TYR CA C N S 297 TYR C C N N 298 TYR O O N N 299 TYR CB C N N 300 TYR CG C Y N 301 TYR CD1 C Y N 302 TYR CD2 C Y N 303 TYR CE1 C Y N 304 TYR CE2 C Y N 305 TYR CZ C Y N 306 TYR OH O N N 307 TYR OXT O N N 308 TYR H H N N 309 TYR H2 H N N 310 TYR HA H N N 311 TYR HB2 H N N 312 TYR HB3 H N N 313 TYR HD1 H N N 314 TYR HD2 H N N 315 TYR HE1 H N N 316 TYR HE2 H N N 317 TYR HH H N N 318 TYR HXT H N N 319 VAL N N N N 320 VAL CA C N S 321 VAL C C N N 322 VAL O O N N 323 VAL CB C N N 324 VAL CG1 C N N 325 VAL CG2 C N N 326 VAL OXT O N N 327 VAL H H N N 328 VAL H2 H N N 329 VAL HA H N N 330 VAL HB H N N 331 VAL HG11 H N N 332 VAL HG12 H N N 333 VAL HG13 H N N 334 VAL HG21 H N N 335 VAL HG22 H N N 336 VAL HG23 H N N 337 VAL HXT H N N 338 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 308 N1 C10 sing N N 1 308 C10 C7 sing N N 2 308 C10 C8 sing N N 3 308 C10 C9 sing N N 4 308 C7 C1 sing N N 5 308 C1 C6 sing N N 6 308 C1 C2 sing N N 7 308 C8 C5 sing N N 8 308 C5 C6 sing N N 9 308 C5 C4 sing N N 10 308 C4 C3 sing N N 11 308 C9 C3 sing N N 12 308 C3 C2 sing N N 13 308 N1 HN1 sing N N 14 308 N1 HN1A sing N N 15 308 C7 H7 sing N N 16 308 C7 H7A sing N N 17 308 C1 H1 sing N N 18 308 C8 H8 sing N N 19 308 C8 H8A sing N N 20 308 C5 H5 sing N N 21 308 C6 H6 sing N N 22 308 C6 H6A sing N N 23 308 C4 H4 sing N N 24 308 C4 H4A sing N N 25 308 C9 H9 sing N N 26 308 C9 H9A sing N N 27 308 C3 H3 sing N N 28 308 C2 H2 sing N N 29 308 C2 H2A sing N N 30 ALA N CA sing N N 31 ALA N H sing N N 32 ALA N H2 sing N N 33 ALA CA C sing N N 34 ALA CA CB sing N N 35 ALA CA HA sing N N 36 ALA C O doub N N 37 ALA C OXT sing N N 38 ALA CB HB1 sing N N 39 ALA CB HB2 sing N N 40 ALA CB HB3 sing N N 41 ALA OXT HXT sing N N 42 ARG N CA sing N N 43 ARG N H sing N N 44 ARG N H2 sing N N 45 ARG CA C sing N N 46 ARG CA CB sing N N 47 ARG CA HA sing N N 48 ARG C O doub N N 49 ARG C OXT sing N N 50 ARG CB CG sing N N 51 ARG CB HB2 sing N N 52 ARG CB HB3 sing N N 53 ARG CG CD sing N N 54 ARG CG HG2 sing N N 55 ARG CG HG3 sing N N 56 ARG CD NE sing N N 57 ARG CD HD2 sing N N 58 ARG CD HD3 sing N N 59 ARG NE CZ sing N N 60 ARG NE HE sing N N 61 ARG CZ NH1 sing N N 62 ARG CZ NH2 doub N N 63 ARG NH1 HH11 sing N N 64 ARG NH1 HH12 sing N N 65 ARG NH2 HH21 sing N N 66 ARG NH2 HH22 sing N N 67 ARG OXT HXT sing N N 68 ASN N CA sing N N 69 ASN N H sing N N 70 ASN N H2 sing N N 71 ASN CA C sing N N 72 ASN CA CB sing N N 73 ASN CA HA sing N N 74 ASN C O doub N N 75 ASN C OXT sing N N 76 ASN CB CG sing N N 77 ASN CB HB2 sing N N 78 ASN CB HB3 sing N N 79 ASN CG OD1 doub N N 80 ASN CG ND2 sing N N 81 ASN ND2 HD21 sing N N 82 ASN ND2 HD22 sing N N 83 ASN OXT HXT sing N N 84 ASP N CA sing N N 85 ASP N H sing N N 86 ASP N H2 sing N N 87 ASP CA C sing N N 88 ASP CA CB sing N N 89 ASP CA HA sing N N 90 ASP C O doub N N 91 ASP C OXT sing N N 92 ASP CB CG sing N N 93 ASP CB HB2 sing N N 94 ASP CB HB3 sing N N 95 ASP CG OD1 doub N N 96 ASP CG OD2 sing N N 97 ASP OD2 HD2 sing N N 98 ASP OXT HXT sing N N 99 GLN N CA sing N N 100 GLN N H sing N N 101 GLN N H2 sing N N 102 GLN CA C sing N N 103 GLN CA CB sing N N 104 GLN CA HA sing N N 105 GLN C O doub N N 106 GLN C OXT sing N N 107 GLN CB CG sing N N 108 GLN CB HB2 sing N N 109 GLN CB HB3 sing N N 110 GLN CG CD sing N N 111 GLN CG HG2 sing N N 112 GLN CG HG3 sing N N 113 GLN CD OE1 doub N N 114 GLN CD NE2 sing N N 115 GLN NE2 HE21 sing N N 116 GLN NE2 HE22 sing N N 117 GLN OXT HXT sing N N 118 GLU N CA sing N N 119 GLU N H sing N N 120 GLU N H2 sing N N 121 GLU CA C sing N N 122 GLU CA CB sing N N 123 GLU CA HA sing N N 124 GLU C O doub N N 125 GLU C OXT sing N N 126 GLU CB CG sing N N 127 GLU CB HB2 sing N N 128 GLU CB HB3 sing N N 129 GLU CG CD sing N N 130 GLU CG HG2 sing N N 131 GLU CG HG3 sing N N 132 GLU CD OE1 doub N N 133 GLU CD OE2 sing N N 134 GLU OE2 HE2 sing N N 135 GLU OXT HXT sing N N 136 GLY N CA sing N N 137 GLY N H sing N N 138 GLY N H2 sing N N 139 GLY CA C sing N N 140 GLY CA HA2 sing N N 141 GLY CA HA3 sing N N 142 GLY C O doub N N 143 GLY C OXT sing N N 144 GLY OXT HXT sing N N 145 HIS N CA sing N N 146 HIS N H sing N N 147 HIS N H2 sing N N 148 HIS CA C sing N N 149 HIS CA CB sing N N 150 HIS CA HA sing N N 151 HIS C O doub N N 152 HIS C OXT sing N N 153 HIS CB CG sing N N 154 HIS CB HB2 sing N N 155 HIS CB HB3 sing N N 156 HIS CG ND1 sing Y N 157 HIS CG CD2 doub Y N 158 HIS ND1 CE1 doub Y N 159 HIS ND1 HD1 sing N N 160 HIS CD2 NE2 sing Y N 161 HIS CD2 HD2 sing N N 162 HIS CE1 NE2 sing Y N 163 HIS CE1 HE1 sing N N 164 HIS NE2 HE2 sing N N 165 HIS OXT HXT sing N N 166 HOH O H1 sing N N 167 HOH O H2 sing N N 168 ILE N CA sing N N 169 ILE N H sing N N 170 ILE N H2 sing N N 171 ILE CA C sing N N 172 ILE CA CB sing N N 173 ILE CA HA sing N N 174 ILE C O doub N N 175 ILE C OXT sing N N 176 ILE CB CG1 sing N N 177 ILE CB CG2 sing N N 178 ILE CB HB sing N N 179 ILE CG1 CD1 sing N N 180 ILE CG1 HG12 sing N N 181 ILE CG1 HG13 sing N N 182 ILE CG2 HG21 sing N N 183 ILE CG2 HG22 sing N N 184 ILE CG2 HG23 sing N N 185 ILE CD1 HD11 sing N N 186 ILE CD1 HD12 sing N N 187 ILE CD1 HD13 sing N N 188 ILE OXT HXT sing N N 189 LEU N CA sing N N 190 LEU N H sing N N 191 LEU N H2 sing N N 192 LEU CA C sing N N 193 LEU CA CB sing N N 194 LEU CA HA sing N N 195 LEU C O doub N N 196 LEU C OXT sing N N 197 LEU CB CG sing N N 198 LEU CB HB2 sing N N 199 LEU CB HB3 sing N N 200 LEU CG CD1 sing N N 201 LEU CG CD2 sing N N 202 LEU CG HG sing N N 203 LEU CD1 HD11 sing N N 204 LEU CD1 HD12 sing N N 205 LEU CD1 HD13 sing N N 206 LEU CD2 HD21 sing N N 207 LEU CD2 HD22 sing N N 208 LEU CD2 HD23 sing N N 209 LEU OXT HXT sing N N 210 LYS N CA sing N N 211 LYS N H sing N N 212 LYS N H2 sing N N 213 LYS CA C sing N N 214 LYS CA CB sing N N 215 LYS CA HA sing N N 216 LYS C O doub N N 217 LYS C OXT sing N N 218 LYS CB CG sing N N 219 LYS CB HB2 sing N N 220 LYS CB HB3 sing N N 221 LYS CG CD sing N N 222 LYS CG HG2 sing N N 223 LYS CG HG3 sing N N 224 LYS CD CE sing N N 225 LYS CD HD2 sing N N 226 LYS CD HD3 sing N N 227 LYS CE NZ sing N N 228 LYS CE HE2 sing N N 229 LYS CE HE3 sing N N 230 LYS NZ HZ1 sing N N 231 LYS NZ HZ2 sing N N 232 LYS NZ HZ3 sing N N 233 LYS OXT HXT sing N N 234 MET N CA sing N N 235 MET N H sing N N 236 MET N H2 sing N N 237 MET CA C sing N N 238 MET CA CB sing N N 239 MET CA HA sing N N 240 MET C O doub N N 241 MET C OXT sing N N 242 MET CB CG sing N N 243 MET CB HB2 sing N N 244 MET CB HB3 sing N N 245 MET CG SD sing N N 246 MET CG HG2 sing N N 247 MET CG HG3 sing N N 248 MET SD CE sing N N 249 MET CE HE1 sing N N 250 MET CE HE2 sing N N 251 MET CE HE3 sing N N 252 MET OXT HXT sing N N 253 PRO N CA sing N N 254 PRO N CD sing N N 255 PRO N H sing N N 256 PRO CA C sing N N 257 PRO CA CB sing N N 258 PRO CA HA sing N N 259 PRO C O doub N N 260 PRO C OXT sing N N 261 PRO CB CG sing N N 262 PRO CB HB2 sing N N 263 PRO CB HB3 sing N N 264 PRO CG CD sing N N 265 PRO CG HG2 sing N N 266 PRO CG HG3 sing N N 267 PRO CD HD2 sing N N 268 PRO CD HD3 sing N N 269 PRO OXT HXT sing N N 270 SER N CA sing N N 271 SER N H sing N N 272 SER N H2 sing N N 273 SER CA C sing N N 274 SER CA CB sing N N 275 SER CA HA sing N N 276 SER C O doub N N 277 SER C OXT sing N N 278 SER CB OG sing N N 279 SER CB HB2 sing N N 280 SER CB HB3 sing N N 281 SER OG HG sing N N 282 SER OXT HXT sing N N 283 TYR N CA sing N N 284 TYR N H sing N N 285 TYR N H2 sing N N 286 TYR CA C sing N N 287 TYR CA CB sing N N 288 TYR CA HA sing N N 289 TYR C O doub N N 290 TYR C OXT sing N N 291 TYR CB CG sing N N 292 TYR CB HB2 sing N N 293 TYR CB HB3 sing N N 294 TYR CG CD1 doub Y N 295 TYR CG CD2 sing Y N 296 TYR CD1 CE1 sing Y N 297 TYR CD1 HD1 sing N N 298 TYR CD2 CE2 doub Y N 299 TYR CD2 HD2 sing N N 300 TYR CE1 CZ doub Y N 301 TYR CE1 HE1 sing N N 302 TYR CE2 CZ sing Y N 303 TYR CE2 HE2 sing N N 304 TYR CZ OH sing N N 305 TYR OH HH sing N N 306 TYR OXT HXT sing N N 307 VAL N CA sing N N 308 VAL N H sing N N 309 VAL N H2 sing N N 310 VAL CA C sing N N 311 VAL CA CB sing N N 312 VAL CA HA sing N N 313 VAL C O doub N N 314 VAL C OXT sing N N 315 VAL CB CG1 sing N N 316 VAL CB CG2 sing N N 317 VAL CB HB sing N N 318 VAL CG1 HG11 sing N N 319 VAL CG1 HG12 sing N N 320 VAL CG1 HG13 sing N N 321 VAL CG2 HG21 sing N N 322 VAL CG2 HG22 sing N N 323 VAL CG2 HG23 sing N N 324 VAL OXT HXT sing N N 325 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id 308 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id 308 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'De novo design model ABP' # _atom_sites.entry_id 6N9H _atom_sites.fract_transf_matrix[1][1] 0.020006 _atom_sites.fract_transf_matrix[1][2] 0.011550 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023100 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014850 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N NA O # loop_