HEADER TRANSPORT PROTEIN 06-DEC-18 6NAZ TITLE CRYSTAL STRUCTURE OF DIRAS 2/3 CHIMERA IN COMPLEX WITH GDP CAVEAT 6NAZ LIGAND GDP A 201 IS ZERO-OCCUPIED. COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTP-BINDING PROTEIN DI-RAS2,GTP-BINDING PROTEIN DI-RAS3, COMPND 3 GTP-BINDING PROTEIN DI-RAS2; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: DISTINCT SUBGROUP OF THE RAS FAMILY MEMBER 2,DISTINCT COMPND 6 SUBGROUP OF THE RAS FAMILY MEMBER 3,RHO-RELATED GTP-BINDING PROTEIN COMPND 7 RHOI,DISTINCT SUBGROUP OF THE RAS FAMILY MEMBER 2; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DIRAS2, DIRAS3, ARHI, NOEY2, RHOI; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BIOLOGICAL ACTIVITY, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.H.GILBERT,A.REGER,R.SHARMA,J.BAST,C.KIM REVDAT 2 11-OCT-23 6NAZ 1 REMARK REVDAT 1 18-DEC-19 6NAZ 0 JRNL AUTH Y.H.GILBERT,A.REGER,R.SHARMA,C.R.BAST,C.KIM JRNL TITL CRYSTAL STRUCTURE OF DIRAS 2/3 CHIMERA IN COMPLEX WITH GDP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 79.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 4324 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.270 REMARK 3 R VALUE (WORKING SET) : 0.267 REMARK 3 FREE R VALUE : 0.332 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.810 REMARK 3 FREE R VALUE TEST SET COUNT : 208 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 79.7270 - 3.0814 1.00 4116 208 0.2667 0.3317 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.490 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 1210 REMARK 3 ANGLE : 0.618 1635 REMARK 3 CHIRALITY : 0.043 195 REMARK 3 PLANARITY : 0.005 200 REMARK 3 DIHEDRAL : 4.876 713 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 41.2690 51.6889 7.1475 REMARK 3 T TENSOR REMARK 3 T11: 0.2512 T22: 0.2517 REMARK 3 T33: 0.2580 T12: 0.0216 REMARK 3 T13: 0.0695 T23: -0.0212 REMARK 3 L TENSOR REMARK 3 L11: 1.5949 L22: 2.0749 REMARK 3 L33: 1.9295 L12: 0.0710 REMARK 3 L13: 0.5328 L23: 0.7559 REMARK 3 S TENSOR REMARK 3 S11: -0.1089 S12: 0.1767 S13: 0.0229 REMARK 3 S21: -0.1285 S22: -0.0366 S23: 0.0595 REMARK 3 S31: -0.0350 S32: -0.1748 S33: 0.1256 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6NAZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1000238405. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9774 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : POINTLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4324 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.080 REMARK 200 RESOLUTION RANGE LOW (A) : 79.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 2.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.08 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.19 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2ERX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1500 MM AMMONIUM SULFATE, 100 MM TRIS REMARK 280 BASE/HYDROCHLORIC ACID PH 8.5, 12% GLYCEROL, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.68000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.84000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.26000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 14.42000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 72.10000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 57.68000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 28.84000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 14.42000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 43.26000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 72.10000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 304 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 GLU A 3 REMARK 465 GLN A 4 REMARK 465 SER A 5 REMARK 465 THR A 43 REMARK 465 SER A 64 REMARK 465 GLY A 65 REMARK 465 ASP A 66 REMARK 465 GLY A 67 REMARK 465 ASP A 110 REMARK 465 VAL A 111 REMARK 465 LYS A 170 REMARK 465 ARG A 171 REMARK 465 ARG A 172 REMARK 465 THR A 173 REMARK 465 VAL A 174 REMARK 465 SER A 175 REMARK 465 LEU A 176 REMARK 465 GLN A 177 REMARK 465 ILE A 178 REMARK 465 ASP A 179 REMARK 465 GLY A 180 REMARK 465 LYS A 181 REMARK 465 LYS A 182 REMARK 465 SER A 183 REMARK 465 LYS A 184 REMARK 465 GLN A 185 REMARK 465 GLN A 186 REMARK 465 LYS A 187 REMARK 465 ARG A 188 REMARK 465 LYS A 189 REMARK 465 GLU A 190 REMARK 465 LYS A 191 REMARK 465 LEU A 192 REMARK 465 LYS A 193 REMARK 465 GLY A 194 REMARK 465 LYS A 195 REMARK 465 CYS A 196 REMARK 465 VAL A 197 REMARK 465 ILE A 198 REMARK 465 MET A 199 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 7 CG OD1 OD2 REMARK 470 ARG A 9 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 42 CG OD1 OD2 REMARK 470 TYR A 44 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 45 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 46 CG CD OE1 NE2 REMARK 470 ILE A 54 CG1 CG2 CD1 REMARK 470 CYS A 55 SG REMARK 470 LYS A 63 CG CD CE NZ REMARK 470 ASN A 68 CG OD1 ND2 REMARK 470 ARG A 69 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 73 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 91 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 95 CG CD OE1 OE2 REMARK 470 ILE A 104 CG1 CG2 CD1 REMARK 470 GLU A 106 CG CD OE1 OE2 REMARK 470 LYS A 108 CG CD CE NZ REMARK 470 GLU A 112 CG CD OE1 OE2 REMARK 470 ARG A 141 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 144 CG CD CE NZ REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 GLU A 164 CG CD OE1 OE2 REMARK 470 LEU A 166 CG CD1 CD2 REMARK 470 GLU A 169 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 52 -90.97 -57.12 REMARK 500 SER A 53 -49.53 -175.52 REMARK 500 CYS A 55 -117.47 -146.59 REMARK 500 SER A 90 100.98 -163.05 REMARK 500 LYS A 108 -141.78 -97.88 REMARK 500 GLU A 125 59.49 -116.25 REMARK 500 ASN A 157 52.56 17.74 REMARK 500 LEU A 168 83.97 -62.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 308 DISTANCE = 6.47 ANGSTROMS REMARK 525 HOH A 309 DISTANCE = 6.96 ANGSTROMS REMARK 525 HOH A 310 DISTANCE = 7.22 ANGSTROMS REMARK 525 HOH A 311 DISTANCE = 8.82 ANGSTROMS REMARK 525 HOH A 312 DISTANCE = 10.02 ANGSTROMS REMARK 525 HOH A 313 DISTANCE = 10.30 ANGSTROMS REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 GDP A 201 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 207 DBREF 6NAZ A 1 61 UNP Q96HU8 DIRA2_HUMAN 1 61 DBREF 6NAZ A 62 78 UNP O95661 DIRA3_HUMAN 92 108 DBREF 6NAZ A 79 199 UNP Q96HU8 DIRA2_HUMAN 79 199 SEQRES 1 A 199 MET PRO GLU GLN SER ASN ASP TYR ARG VAL ALA VAL PHE SEQRES 2 A 199 GLY ALA GLY GLY VAL GLY LYS SER SER LEU VAL LEU ARG SEQRES 3 A 199 PHE VAL LYS GLY THR PHE ARG GLU SER TYR ILE PRO THR SEQRES 4 A 199 VAL GLU ASP THR TYR ARG GLN VAL ILE SER CYS ASP LYS SEQRES 5 A 199 SER ILE CYS THR LEU GLN ILE THR ASP SER LYS SER GLY SEQRES 6 A 199 ASP GLY ASN ARG ALA LEU GLN ARG HIS VAL ILE ALA ARG SEQRES 7 A 199 GLY HIS ALA PHE ILE LEU VAL TYR SER ILE THR SER ARG SEQRES 8 A 199 GLN SER LEU GLU GLU LEU LYS PRO ILE TYR GLU GLN ILE SEQRES 9 A 199 CYS GLU ILE LYS GLY ASP VAL GLU SER ILE PRO ILE MET SEQRES 10 A 199 LEU VAL GLY ASN LYS CYS ASP GLU SER PRO SER ARG GLU SEQRES 11 A 199 VAL GLN SER SER GLU ALA GLU ALA LEU ALA ARG THR TRP SEQRES 12 A 199 LYS CYS ALA PHE MET GLU THR SER ALA LYS LEU ASN HIS SEQRES 13 A 199 ASN VAL LYS GLU LEU PHE GLN GLU LEU LEU ASN LEU GLU SEQRES 14 A 199 LYS ARG ARG THR VAL SER LEU GLN ILE ASP GLY LYS LYS SEQRES 15 A 199 SER LYS GLN GLN LYS ARG LYS GLU LYS LEU LYS GLY LYS SEQRES 16 A 199 CYS VAL ILE MET HET GDP A 201 28 HET GOL A 202 6 HET GOL A 203 6 HET GOL A 204 6 HET EDO A 205 4 HET EDO A 206 4 HET EDO A 207 4 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 GDP C10 H15 N5 O11 P2 FORMUL 3 GOL 3(C3 H8 O3) FORMUL 6 EDO 3(C2 H6 O2) FORMUL 9 HOH *13(H2 O) HELIX 1 AA1 GLY A 19 LYS A 29 1 11 HELIX 2 AA2 PRO A 38 ASP A 42 5 5 HELIX 3 AA3 LEU A 71 GLY A 79 1 9 HELIX 4 AA4 SER A 90 GLU A 96 1 7 HELIX 5 AA5 GLU A 96 LYS A 108 1 13 HELIX 6 AA6 GLU A 125 ARG A 129 5 5 HELIX 7 AA7 GLN A 132 LYS A 144 1 13 HELIX 8 AA8 VAL A 158 LEU A 168 1 11 SHEET 1 AA1 6 ARG A 45 SER A 49 0 SHEET 2 AA1 6 GLN A 58 SER A 62 -1 O ASP A 61 N GLN A 46 SHEET 3 AA1 6 VAL A 12 GLY A 14 1 N VAL A 12 O THR A 60 SHEET 4 AA1 6 PHE A 82 SER A 87 1 O VAL A 85 N PHE A 13 SHEET 5 AA1 6 ILE A 116 ASN A 121 1 O VAL A 119 N LEU A 84 SHEET 6 AA1 6 ALA A 146 MET A 148 1 O ALA A 146 N LEU A 118 SITE 1 AC1 5 ALA A 140 ARG A 141 CYS A 145 ALA A 146 SITE 2 AC1 5 PHE A 147 SITE 1 AC2 3 THR A 89 LYS A 122 EDO A 207 SITE 1 AC3 2 ASP A 51 THR A 56 SITE 1 AC4 4 GLY A 16 GLY A 17 VAL A 18 EDO A 205 CRYST1 92.030 92.030 86.520 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010866 0.006274 0.000000 0.00000 SCALE2 0.000000 0.012547 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011558 0.00000