HEADER OXIDOREDUCTASE 06-DEC-18 6NBB TITLE HORSE LIVER ALCOHOL DEHYDROGENASE DETERMINED USING SINGLE-PARTICLE TITLE 2 CRYO-EM AT 200 KEV COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALCOHOL DEHYDROGENASE E CHAIN; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EQUUS CABALLUS; SOURCE 3 ORGANISM_COMMON: HORSE; SOURCE 4 ORGANISM_TAXID: 9796; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DEHYDROGENASE, NADH-BINDING, HOMO-2-MER, OXIDOREDUCTASE EXPDTA ELECTRON MICROSCOPY NUMMDL 10 AUTHOR M.A.HERZIK JR.,M.WU,G.C.LANDER REVDAT 3 18-DEC-19 6NBB 1 CRYST1 SCALE REVDAT 2 20-MAR-19 6NBB 1 JRNL REVDAT 1 13-MAR-19 6NBB 0 JRNL AUTH M.A.HERZIK JR.,M.WU,G.C.LANDER JRNL TITL HIGH-RESOLUTION STRUCTURE DETERMINATION OF SUB-100 KDA JRNL TITL 2 COMPLEXES USING CONVENTIONAL CRYO-EM. JRNL REF NAT COMMUN V. 10 1032 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 30833564 JRNL DOI 10.1038/S41467-019-08991-8 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : LEGINON, CTFFIND, UCSF CHIMERA, RELION, REMARK 3 RELION, RELION, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : BACK PROJECTION REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 2JHF REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : 67.000 REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.900 REMARK 3 NUMBER OF PARTICLES : 11672 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6NBB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1000238400. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : ALCOHOL DEHYDROGENASE FROM REMARK 245 EQUINE LIVER REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 2.50 REMARK 245 SAMPLE SUPPORT DETAILS : GRIDS WERE PLASMA CLEANED USING REMARK 245 A SOLARUS PLASMA CLEANER (GATAN, REMARK 245 INC.). REMARK 245 SAMPLE VITRIFICATION DETAILS : SAMPLE WAS MANUALLY BLOTTED FOR REMARK 245 4-5 SECONDS USING WHATMAN NO. 1 REMARK 245 FILTER PAPER IMMEDIATELY PRIOR REMARK 245 TO PLUNGE-FREEZING. REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.50 REMARK 245 SAMPLE DETAILS : LYOPHILIZED HORSE LIVER ADH REMARK 245 PURCHASED FROM SIGMA ALDRICH WAS FURTHER PURIFIED TO HOMOGENEITY. REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 1151 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TALOS ARCTICA REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 5000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 16000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 69.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 73000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 32 -158.46 -82.84 REMARK 500 1 CYS A 174 -51.27 -126.86 REMARK 500 1 ILE A 368 -61.04 -99.71 REMARK 500 1 VAL B 41 -61.93 -107.08 REMARK 500 1 LYS B 113 40.77 -104.96 REMARK 500 1 CYS B 174 -51.62 -129.48 REMARK 500 1 ASN B 259 66.55 60.16 REMARK 500 1 ILE B 368 -61.85 -101.32 REMARK 500 2 LYS A 32 -159.12 -85.52 REMARK 500 2 CYS A 174 -50.03 -126.34 REMARK 500 2 ILE A 269 -60.65 -100.83 REMARK 500 2 SER A 364 10.22 -141.77 REMARK 500 2 VAL B 41 -62.16 -109.36 REMARK 500 2 ALA B 163 73.54 -100.81 REMARK 500 2 CYS B 174 -51.50 -127.83 REMARK 500 3 CYS A 174 -59.85 -124.94 REMARK 500 3 ASN A 259 67.08 60.07 REMARK 500 3 ALA A 317 115.21 -161.68 REMARK 500 3 ILE A 368 -62.36 -96.58 REMARK 500 3 THR B 122 -169.99 -126.09 REMARK 500 3 CYS B 174 -58.26 -126.63 REMARK 500 3 ASN B 259 66.73 60.27 REMARK 500 3 ALA B 317 112.13 -160.97 REMARK 500 3 ILE B 368 -62.76 -96.56 REMARK 500 4 LYS A 113 52.73 -92.62 REMARK 500 4 CYS A 174 -50.95 -130.13 REMARK 500 4 ASN A 259 66.40 60.18 REMARK 500 4 SER A 364 11.80 -141.12 REMARK 500 4 CYS B 174 -50.83 -128.64 REMARK 500 4 ASN B 259 66.80 60.07 REMARK 500 4 ALA B 317 115.84 -162.09 REMARK 500 5 ALA A 163 34.11 -98.81 REMARK 500 5 CYS A 174 -50.31 -125.74 REMARK 500 5 THR B 122 -169.61 -127.71 REMARK 500 5 MET B 123 -169.23 -102.86 REMARK 500 5 ALA B 163 51.55 -92.84 REMARK 500 5 CYS B 174 -37.26 -136.71 REMARK 500 6 SER A 144 74.99 54.78 REMARK 500 6 LYS A 168 -35.62 -130.03 REMARK 500 6 CYS A 174 -52.77 -128.64 REMARK 500 6 ASN A 259 -11.12 70.20 REMARK 500 6 ALA A 317 114.34 -162.39 REMARK 500 6 ALA B 65 -169.35 -79.13 REMARK 500 6 SER B 144 72.74 58.12 REMARK 500 6 CYS B 174 -56.61 -126.50 REMARK 500 6 ASN B 259 -11.07 70.16 REMARK 500 6 ALA B 317 109.61 -161.69 REMARK 500 6 ILE B 368 -62.68 -91.54 REMARK 500 7 GLU A 107 25.08 -143.02 REMARK 500 7 LYS A 113 30.66 -97.65 REMARK 500 REMARK 500 THIS ENTRY HAS 82 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 323 SER A 324 4 -140.11 REMARK 500 LYS B 323 SER B 324 4 -139.01 REMARK 500 LYS A 323 SER A 324 5 -141.35 REMARK 500 LYS B 323 SER B 324 5 -140.29 REMARK 500 LYS A 323 SER A 324 8 -146.03 REMARK 500 LYS B 323 SER B 324 8 -145.45 REMARK 500 LYS A 323 SER A 324 10 -144.22 REMARK 500 LYS B 323 SER B 324 10 -142.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 46 SG REMARK 620 2 HIS A 67 NE2 110.8 REMARK 620 3 CYS A 174 SG 134.8 87.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 403 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 97 SG REMARK 620 2 CYS A 100 SG 76.0 REMARK 620 3 CYS A 103 SG 89.8 85.3 REMARK 620 4 CYS A 111 SG 101.8 115.5 158.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 46 SG REMARK 620 2 HIS B 67 NE2 99.5 REMARK 620 3 CYS B 174 SG 151.0 101.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 403 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 97 SG REMARK 620 2 CYS B 100 SG 110.6 REMARK 620 3 CYS B 103 SG 118.6 84.5 REMARK 620 4 CYS B 111 SG 109.8 112.5 118.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-0406 RELATED DB: EMDB REMARK 900 HORSE LIVER ALCOHOL DEHYDROGENASE DETERMINED USING SINGLE-PARTICLE REMARK 900 CRYO-EM AT 200 KEV DBREF 6NBB A 1 374 UNP P00327 ADH1E_HORSE 2 375 DBREF 6NBB B 1 374 UNP P00327 ADH1E_HORSE 2 375 SEQRES 1 A 374 SER THR ALA GLY LYS VAL ILE LYS CYS LYS ALA ALA VAL SEQRES 2 A 374 LEU TRP GLU GLU LYS LYS PRO PHE SER ILE GLU GLU VAL SEQRES 3 A 374 GLU VAL ALA PRO PRO LYS ALA HIS GLU VAL ARG ILE LYS SEQRES 4 A 374 MET VAL ALA THR GLY ILE CYS ARG SER ASP ASP HIS VAL SEQRES 5 A 374 VAL SER GLY THR LEU VAL THR PRO LEU PRO VAL ILE ALA SEQRES 6 A 374 GLY HIS GLU ALA ALA GLY ILE VAL GLU SER ILE GLY GLU SEQRES 7 A 374 GLY VAL THR THR VAL ARG PRO GLY ASP LYS VAL ILE PRO SEQRES 8 A 374 LEU PHE THR PRO GLN CYS GLY LYS CYS ARG VAL CYS LYS SEQRES 9 A 374 HIS PRO GLU GLY ASN PHE CYS LEU LYS ASN ASP LEU SER SEQRES 10 A 374 MET PRO ARG GLY THR MET GLN ASP GLY THR SER ARG PHE SEQRES 11 A 374 THR CYS ARG GLY LYS PRO ILE HIS HIS PHE LEU GLY THR SEQRES 12 A 374 SER THR PHE SER GLN TYR THR VAL VAL ASP GLU ILE SER SEQRES 13 A 374 VAL ALA LYS ILE ASP ALA ALA SER PRO LEU GLU LYS VAL SEQRES 14 A 374 CYS LEU ILE GLY CYS GLY PHE SER THR GLY TYR GLY SER SEQRES 15 A 374 ALA VAL LYS VAL ALA LYS VAL THR GLN GLY SER THR CYS SEQRES 16 A 374 ALA VAL PHE GLY LEU GLY GLY VAL GLY LEU SER VAL ILE SEQRES 17 A 374 MET GLY CYS LYS ALA ALA GLY ALA ALA ARG ILE ILE GLY SEQRES 18 A 374 VAL ASP ILE ASN LYS ASP LYS PHE ALA LYS ALA LYS GLU SEQRES 19 A 374 VAL GLY ALA THR GLU CYS VAL ASN PRO GLN ASP TYR LYS SEQRES 20 A 374 LYS PRO ILE GLN GLU VAL LEU THR GLU MET SER ASN GLY SEQRES 21 A 374 GLY VAL ASP PHE SER PHE GLU VAL ILE GLY ARG LEU ASP SEQRES 22 A 374 THR MET VAL THR ALA LEU SER CYS CYS GLN GLU ALA TYR SEQRES 23 A 374 GLY VAL SER VAL ILE VAL GLY VAL PRO PRO ASP SER GLN SEQRES 24 A 374 ASN LEU SER MET ASN PRO MET LEU LEU LEU SER GLY ARG SEQRES 25 A 374 THR TRP LYS GLY ALA ILE PHE GLY GLY PHE LYS SER LYS SEQRES 26 A 374 ASP SER VAL PRO LYS LEU VAL ALA ASP PHE MET ALA LYS SEQRES 27 A 374 LYS PHE ALA LEU ASP PRO LEU ILE THR HIS VAL LEU PRO SEQRES 28 A 374 PHE GLU LYS ILE ASN GLU GLY PHE ASP LEU LEU ARG SER SEQRES 29 A 374 GLY GLU SER ILE ARG THR ILE LEU THR PHE SEQRES 1 B 374 SER THR ALA GLY LYS VAL ILE LYS CYS LYS ALA ALA VAL SEQRES 2 B 374 LEU TRP GLU GLU LYS LYS PRO PHE SER ILE GLU GLU VAL SEQRES 3 B 374 GLU VAL ALA PRO PRO LYS ALA HIS GLU VAL ARG ILE LYS SEQRES 4 B 374 MET VAL ALA THR GLY ILE CYS ARG SER ASP ASP HIS VAL SEQRES 5 B 374 VAL SER GLY THR LEU VAL THR PRO LEU PRO VAL ILE ALA SEQRES 6 B 374 GLY HIS GLU ALA ALA GLY ILE VAL GLU SER ILE GLY GLU SEQRES 7 B 374 GLY VAL THR THR VAL ARG PRO GLY ASP LYS VAL ILE PRO SEQRES 8 B 374 LEU PHE THR PRO GLN CYS GLY LYS CYS ARG VAL CYS LYS SEQRES 9 B 374 HIS PRO GLU GLY ASN PHE CYS LEU LYS ASN ASP LEU SER SEQRES 10 B 374 MET PRO ARG GLY THR MET GLN ASP GLY THR SER ARG PHE SEQRES 11 B 374 THR CYS ARG GLY LYS PRO ILE HIS HIS PHE LEU GLY THR SEQRES 12 B 374 SER THR PHE SER GLN TYR THR VAL VAL ASP GLU ILE SER SEQRES 13 B 374 VAL ALA LYS ILE ASP ALA ALA SER PRO LEU GLU LYS VAL SEQRES 14 B 374 CYS LEU ILE GLY CYS GLY PHE SER THR GLY TYR GLY SER SEQRES 15 B 374 ALA VAL LYS VAL ALA LYS VAL THR GLN GLY SER THR CYS SEQRES 16 B 374 ALA VAL PHE GLY LEU GLY GLY VAL GLY LEU SER VAL ILE SEQRES 17 B 374 MET GLY CYS LYS ALA ALA GLY ALA ALA ARG ILE ILE GLY SEQRES 18 B 374 VAL ASP ILE ASN LYS ASP LYS PHE ALA LYS ALA LYS GLU SEQRES 19 B 374 VAL GLY ALA THR GLU CYS VAL ASN PRO GLN ASP TYR LYS SEQRES 20 B 374 LYS PRO ILE GLN GLU VAL LEU THR GLU MET SER ASN GLY SEQRES 21 B 374 GLY VAL ASP PHE SER PHE GLU VAL ILE GLY ARG LEU ASP SEQRES 22 B 374 THR MET VAL THR ALA LEU SER CYS CYS GLN GLU ALA TYR SEQRES 23 B 374 GLY VAL SER VAL ILE VAL GLY VAL PRO PRO ASP SER GLN SEQRES 24 B 374 ASN LEU SER MET ASN PRO MET LEU LEU LEU SER GLY ARG SEQRES 25 B 374 THR TRP LYS GLY ALA ILE PHE GLY GLY PHE LYS SER LYS SEQRES 26 B 374 ASP SER VAL PRO LYS LEU VAL ALA ASP PHE MET ALA LYS SEQRES 27 B 374 LYS PHE ALA LEU ASP PRO LEU ILE THR HIS VAL LEU PRO SEQRES 28 B 374 PHE GLU LYS ILE ASN GLU GLY PHE ASP LEU LEU ARG SER SEQRES 29 B 374 GLY GLU SER ILE ARG THR ILE LEU THR PHE HET NAD A 401 44 HET ZN A 402 1 HET ZN A 403 1 HET NAD B 401 44 HET ZN B 402 1 HET ZN B 403 1 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM ZN ZINC ION FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 4 ZN 4(ZN 2+) HELIX 1 AA1 CYS A 46 SER A 54 1 9 HELIX 2 AA2 PRO A 165 CYS A 170 1 6 HELIX 3 AA3 CYS A 174 LYS A 185 1 12 HELIX 4 AA4 GLY A 201 ALA A 214 1 14 HELIX 5 AA5 ASN A 225 ASP A 227 5 3 HELIX 6 AA6 LYS A 228 LYS A 233 1 6 HELIX 7 AA7 ASN A 242 TYR A 246 5 5 HELIX 8 AA8 PRO A 249 SER A 258 1 10 HELIX 9 AA9 ARG A 271 CYS A 281 1 11 HELIX 10 AB1 PRO A 305 SER A 310 1 6 HELIX 11 AB2 ILE A 318 PHE A 322 5 5 HELIX 12 AB3 LYS A 323 ALA A 337 1 15 HELIX 13 AB4 LEU A 342 PRO A 344 5 3 HELIX 14 AB5 LYS A 354 SER A 364 1 11 HELIX 15 AB6 CYS B 46 SER B 54 1 9 HELIX 16 AB7 PRO B 165 CYS B 170 1 6 HELIX 17 AB8 CYS B 174 LYS B 185 1 12 HELIX 18 AB9 GLY B 201 ALA B 214 1 14 HELIX 19 AC1 ASN B 225 ASP B 227 5 3 HELIX 20 AC2 LYS B 228 LYS B 233 1 6 HELIX 21 AC3 ASN B 242 TYR B 246 5 5 HELIX 22 AC4 PRO B 249 SER B 258 1 10 HELIX 23 AC5 ARG B 271 CYS B 281 1 11 HELIX 24 AC6 PRO B 305 SER B 310 1 6 HELIX 25 AC7 ILE B 318 PHE B 322 5 5 HELIX 26 AC8 LYS B 323 ALA B 337 1 15 HELIX 27 AC9 LEU B 342 PRO B 344 5 3 HELIX 28 AD1 LYS B 354 SER B 364 1 11 SHEET 1 AA1 5 VAL A 63 ILE A 64 0 SHEET 2 AA1 5 ILE A 7 LEU A 14 -1 N LEU A 14 O VAL A 63 SHEET 3 AA1 5 SER A 22 VAL A 28 -1 O GLU A 24 N ALA A 11 SHEET 4 AA1 5 PHE A 130 CYS A 132 -1 O THR A 131 N GLU A 27 SHEET 5 AA1 5 LYS A 135 ILE A 137 -1 O ILE A 137 N PHE A 130 SHEET 1 AA2 5 TYR A 149 ASP A 153 0 SHEET 2 AA2 5 GLU A 35 GLY A 44 -1 N VAL A 36 O VAL A 152 SHEET 3 AA2 5 GLU A 68 ILE A 76 -1 O ILE A 72 N LYS A 39 SHEET 4 AA2 5 LYS A 88 PRO A 91 -1 O VAL A 89 N GLY A 71 SHEET 5 AA2 5 VAL A 157 LYS A 159 -1 O ALA A 158 N ILE A 90 SHEET 1 AA3 4 TYR A 149 ASP A 153 0 SHEET 2 AA3 4 GLU A 35 GLY A 44 -1 N VAL A 36 O VAL A 152 SHEET 3 AA3 4 ARG A 369 THR A 373 -1 O LEU A 372 N THR A 43 SHEET 4 AA3 4 ILE A 346 PRO A 351 1 N HIS A 348 O ILE A 371 SHEET 1 AA412 GLU A 239 VAL A 241 0 SHEET 2 AA412 ARG A 218 VAL A 222 1 N GLY A 221 O VAL A 241 SHEET 3 AA412 THR A 194 PHE A 198 1 N CYS A 195 O ARG A 218 SHEET 4 AA412 PHE A 264 GLU A 267 1 O PHE A 264 N THR A 194 SHEET 5 AA412 VAL A 288 ILE A 291 1 O VAL A 288 N SER A 265 SHEET 6 AA412 THR A 313 GLY A 316 1 O THR A 313 N SER A 289 SHEET 7 AA412 THR B 313 GLY B 316 -1 O TRP B 314 N TRP A 314 SHEET 8 AA412 VAL B 288 ILE B 291 1 N SER B 289 O THR B 313 SHEET 9 AA412 PHE B 264 GLU B 267 1 N SER B 265 O VAL B 288 SHEET 10 AA412 THR B 194 PHE B 198 1 N THR B 194 O PHE B 264 SHEET 11 AA412 ARG B 218 VAL B 222 1 O ARG B 218 N CYS B 195 SHEET 12 AA412 GLU B 239 VAL B 241 1 O VAL B 241 N GLY B 221 SHEET 1 AA5 5 VAL B 63 ILE B 64 0 SHEET 2 AA5 5 ILE B 7 LEU B 14 -1 N LEU B 14 O VAL B 63 SHEET 3 AA5 5 SER B 22 VAL B 28 -1 O VAL B 26 N CYS B 9 SHEET 4 AA5 5 PHE B 130 CYS B 132 -1 O THR B 131 N GLU B 27 SHEET 5 AA5 5 LYS B 135 ILE B 137 -1 O ILE B 137 N PHE B 130 SHEET 1 AA6 5 TYR B 149 ASP B 153 0 SHEET 2 AA6 5 GLU B 35 GLY B 44 -1 N VAL B 36 O VAL B 152 SHEET 3 AA6 5 GLU B 68 ILE B 76 -1 O ILE B 72 N LYS B 39 SHEET 4 AA6 5 LYS B 88 PRO B 91 -1 O VAL B 89 N GLY B 71 SHEET 5 AA6 5 VAL B 157 LYS B 159 -1 O ALA B 158 N ILE B 90 SHEET 1 AA7 4 TYR B 149 ASP B 153 0 SHEET 2 AA7 4 GLU B 35 GLY B 44 -1 N VAL B 36 O VAL B 152 SHEET 3 AA7 4 ARG B 369 THR B 373 -1 O LEU B 372 N THR B 43 SHEET 4 AA7 4 ILE B 346 PRO B 351 1 N HIS B 348 O ILE B 371 SSBOND 1 CYS A 97 CYS A 100 1555 1555 2.81 SSBOND 2 CYS A 100 CYS A 103 1555 1555 2.97 SSBOND 3 CYS B 100 CYS B 103 1555 1555 2.95 LINK SG CYS A 46 ZN ZN A 402 1555 1555 2.21 LINK NE2 HIS A 67 ZN ZN A 402 1555 1555 2.01 LINK SG CYS A 97 ZN ZN A 403 1555 1555 2.31 LINK SG CYS A 100 ZN ZN A 403 1555 1555 2.26 LINK SG CYS A 103 ZN ZN A 403 1555 1555 2.13 LINK SG CYS A 111 ZN ZN A 403 1555 1555 2.17 LINK SG CYS A 174 ZN ZN A 402 1555 1555 2.30 LINK SG CYS B 46 ZN ZN B 402 1555 1555 2.28 LINK NE2 HIS B 67 ZN ZN B 402 1555 1555 2.02 LINK SG CYS B 97 ZN ZN B 403 1555 1555 2.22 LINK SG CYS B 100 ZN ZN B 403 1555 1555 2.21 LINK SG CYS B 103 ZN ZN B 403 1555 1555 2.18 LINK SG CYS B 111 ZN ZN B 403 1555 1555 2.20 LINK SG CYS B 174 ZN ZN B 402 1555 1555 2.33 CISPEP 1 LEU A 61 PRO A 62 1 -3.71 CISPEP 2 LEU B 61 PRO B 62 1 -0.65 CISPEP 3 LEU A 61 PRO A 62 2 -0.39 CISPEP 4 LEU B 61 PRO B 62 2 -0.38 CISPEP 5 LEU A 61 PRO A 62 3 -1.09 CISPEP 6 LEU B 61 PRO B 62 3 -2.02 CISPEP 7 LEU A 61 PRO A 62 4 -2.42 CISPEP 8 LEU B 61 PRO B 62 4 -2.68 CISPEP 9 LEU A 61 PRO A 62 5 0.68 CISPEP 10 LEU B 61 PRO B 62 5 0.58 CISPEP 11 LEU A 61 PRO A 62 6 -0.64 CISPEP 12 LEU B 61 PRO B 62 6 -1.71 CISPEP 13 LEU A 61 PRO A 62 7 -0.21 CISPEP 14 LEU B 61 PRO B 62 7 0.09 CISPEP 15 LEU A 61 PRO A 62 8 -0.96 CISPEP 16 LEU B 61 PRO B 62 8 -0.57 CISPEP 17 LEU A 61 PRO A 62 9 -2.24 CISPEP 18 LEU B 61 PRO B 62 9 -4.47 CISPEP 19 LEU A 61 PRO A 62 10 -0.21 CISPEP 20 LEU B 61 PRO B 62 10 -0.47 SITE 1 AC1 20 ARG A 47 SER A 48 HIS A 51 CYS A 174 SITE 2 AC1 20 THR A 178 GLY A 201 GLY A 202 VAL A 203 SITE 3 AC1 20 ASP A 223 ILE A 224 LYS A 228 VAL A 268 SITE 4 AC1 20 ILE A 269 ARG A 271 VAL A 292 VAL A 294 SITE 5 AC1 20 ALA A 317 ILE A 318 PHE A 319 ARG A 369 SITE 1 AC2 4 CYS A 46 HIS A 67 GLU A 68 CYS A 174 SITE 1 AC3 4 CYS A 97 CYS A 100 CYS A 103 CYS A 111 SITE 1 AC4 23 ARG B 47 SER B 48 HIS B 51 CYS B 174 SITE 2 AC4 23 THR B 178 LEU B 200 GLY B 201 GLY B 202 SITE 3 AC4 23 VAL B 203 ASP B 223 ILE B 224 LYS B 228 SITE 4 AC4 23 VAL B 268 ILE B 269 ARG B 271 VAL B 292 SITE 5 AC4 23 GLY B 293 VAL B 294 ALA B 317 ILE B 318 SITE 6 AC4 23 PHE B 319 ARG B 369 ZN B 402 SITE 1 AC5 5 CYS B 46 HIS B 67 GLU B 68 CYS B 174 SITE 2 AC5 5 NAD B 401 SITE 1 AC6 4 CYS B 97 CYS B 100 CYS B 103 CYS B 111 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1