HEADER TRANSPORT PROTEIN 10-DEC-18 6NC6 TITLE LIPID II FLIPPASE MURJ, INWARD CLOSED CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIPID II FLIPPASE MURJ; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOSIPHO AFRICANUS (STRAIN TCF52B); SOURCE 3 ORGANISM_TAXID: 484019; SOURCE 4 STRAIN: TCF52B; SOURCE 5 GENE: MURJ, MVIN, THA_1814; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSPORTER, FLIPPASE, PEPTIDOGLYCAN, CELL WALL, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.C.Y.KUK,S.-Y.LEE REVDAT 4 11-OCT-23 6NC6 1 REMARK REVDAT 3 01-JAN-20 6NC6 1 REMARK REVDAT 2 01-MAY-19 6NC6 1 JRNL REVDAT 1 17-APR-19 6NC6 0 JRNL AUTH A.C.Y.KUK,A.HAO,Z.GUAN,S.Y.LEE JRNL TITL VISUALIZING CONFORMATION TRANSITIONS OF THE LIPID II JRNL TITL 2 FLIPPASE MURJ. JRNL REF NAT COMMUN V. 10 1736 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 30988294 JRNL DOI 10.1038/S41467-019-09658-0 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 85.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.6 REMARK 3 NUMBER OF REFLECTIONS : 17624 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.256 REMARK 3 R VALUE (WORKING SET) : 0.255 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 876 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 85.6635 - 5.8143 1.00 3275 172 0.2264 0.2322 REMARK 3 2 5.8143 - 4.6151 1.00 3121 164 0.2545 0.3140 REMARK 3 3 4.6151 - 4.0317 0.98 3038 157 0.2656 0.2913 REMARK 3 4 4.0317 - 3.6631 0.94 2873 152 0.2521 0.2750 REMARK 3 5 3.6631 - 3.4005 0.77 2350 120 0.2698 0.2497 REMARK 3 6 3.4005 - 3.2000 0.69 2091 111 0.2890 0.3371 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 7531 REMARK 3 ANGLE : 0.630 10236 REMARK 3 CHIRALITY : 0.043 1226 REMARK 3 PLANARITY : 0.005 1223 REMARK 3 DIHEDRAL : 14.777 2538 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6NC6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1000236698. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17624 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 20.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.30 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5T77 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 M NACL, 50 MM NA ACETATE-HCL PH 4.6, REMARK 280 40% PEG400, LIPIDIC CUBIC PHASE, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.25800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 79.25800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ILE A 3 REMARK 465 LEU A 470 REMARK 465 TYR A 471 REMARK 465 ALA A 472 REMARK 465 ARG A 473 REMARK 465 LYS A 474 REMARK 465 LYS A 475 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ILE B 3 REMARK 465 LEU B 4 REMARK 465 PHE B 5 REMARK 465 SER B 6 REMARK 465 ARG B 468 REMARK 465 PHE B 469 REMARK 465 LEU B 470 REMARK 465 TYR B 471 REMARK 465 ALA B 472 REMARK 465 ARG B 473 REMARK 465 LYS B 474 REMARK 465 LYS B 475 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 4 CG CD1 CD2 REMARK 470 ILE A 8 CG1 CG2 CD1 REMARK 470 LYS A 53 CG CD CE NZ REMARK 470 GLU A 70 CG CD OE1 OE2 REMARK 470 SER A 72 OG REMARK 470 LYS A 122 CD CE NZ REMARK 470 LYS A 123 CD CE NZ REMARK 470 LYS A 150 CG CD CE NZ REMARK 470 LYS A 174 CG CD CE NZ REMARK 470 LYS A 197 CD CE NZ REMARK 470 LYS A 203 CG CD CE NZ REMARK 470 LYS A 216 CG CD CE NZ REMARK 470 PHE A 219 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 275 CG CD CE NZ REMARK 470 ASN A 278 CG OD1 ND2 REMARK 470 LYS A 358 CG CD CE NZ REMARK 470 LYS A 384 CG CD CE NZ REMARK 470 LYS A 415 CG CD CE NZ REMARK 470 ASP A 438 CG OD1 OD2 REMARK 470 ARG A 463 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 465 CG CD1 CD2 REMARK 470 ARG A 467 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 468 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 469 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER B 7 OG REMARK 470 ILE B 8 CG1 CG2 CD1 REMARK 470 LEU B 9 CG CD1 CD2 REMARK 470 SER B 11 OG REMARK 470 GLU B 103 CG CD OE1 OE2 REMARK 470 LYS B 122 CG CD CE NZ REMARK 470 PHE B 151 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE B 152 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TRP B 153 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 153 CZ3 CH2 REMARK 470 LYS B 174 CD CE NZ REMARK 470 LYS B 197 CD CE NZ REMARK 470 LYS B 201 CG CD CE NZ REMARK 470 LYS B 203 CG CD CE NZ REMARK 470 LYS B 216 CG CD CE NZ REMARK 470 PHE B 219 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 244 CE NZ REMARK 470 LYS B 275 CE NZ REMARK 470 ARG B 280 NE CZ NH1 NH2 REMARK 470 LYS B 281 CE NZ REMARK 470 LYS B 358 CG CD CE NZ REMARK 470 LYS B 384 CE NZ REMARK 470 LYS B 415 CG CD CE NZ REMARK 470 ARG B 463 NE CZ NH1 NH2 REMARK 470 ASP B 464 CG OD1 OD2 REMARK 470 LEU B 465 CG CD1 CD2 REMARK 470 ILE B 466 CG1 CG2 CD1 REMARK 470 ARG B 467 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG SER B 269 HG1 THR B 294 1.28 REMARK 500 O VAL B 271 HG SER B 274 1.58 REMARK 500 O LYS B 78 H SER B 82 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 266 -54.54 -125.92 REMARK 500 LYS B 150 65.53 -105.55 REMARK 500 VAL B 266 -56.40 -126.61 REMARK 500 ASN B 282 56.49 -94.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 OLB A 506 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 505 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 210 ND1 REMARK 620 2 HIS A 213 ND1 148.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 501 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 235 OD1 REMARK 620 2 ASN A 374 OD1 89.1 REMARK 620 3 ASP A 378 OD1 91.5 80.0 REMARK 620 4 VAL A 390 O 140.8 129.8 91.7 REMARK 620 5 THR A 394 OG1 95.9 91.7 168.8 87.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 504 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 210 ND1 REMARK 620 2 HIS B 213 ND1 131.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLB A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 504 DBREF 6NC6 A 1 475 UNP B7IE18 MURJ_THEAB 1 475 DBREF 6NC6 B 1 475 UNP B7IE18 MURJ_THEAB 1 475 SEQRES 1 A 475 MET SER ILE LEU PHE SER SER ILE LEU PHE SER ILE ALA SEQRES 2 A 475 THR PHE PHE SER ARG ILE LEU GLY LEU PHE ARG ASP VAL SEQRES 3 A 475 LEU PHE ALA LYS TYR PHE GLY VAL SER TYR GLU LEU ASP SEQRES 4 A 475 ALA TYR PHE ILE ALA ILE MET PHE PRO PHE PHE LEU ARG SEQRES 5 A 475 LYS VAL PHE GLY GLU GLY ALA MET SER SER ALA PHE VAL SEQRES 6 A 475 PRO LEU TYR SER GLU LYS SER GLY GLU GLU LYS ASP LYS SEQRES 7 A 475 PHE LEU SER SER VAL ILE ASN GLY PHE SER LEU ILE ILE SEQRES 8 A 475 LEU ALA LEU VAL ILE LEU SER TYR PHE PHE PRO GLU LEU SEQRES 9 A 475 ILE ILE ASN LEU PHE GLY ALA GLY SER SER HIS GLU THR SEQRES 10 A 475 LYS ILE LEU ALA LYS LYS LEU LEU LEU ILE THR SER PRO SEQRES 11 A 475 SER ILE TYR PHE ILE PHE LEU TRP ALA ILE SER TYR SER SEQRES 12 A 475 ILE LEU ASN THR ASN ASN LYS PHE PHE TRP PRO ALA LEU SEQRES 13 A 475 THR PRO SER ILE SER ASN ILE THR ILE ILE ILE GLY THR SEQRES 14 A 475 PHE LEU SER THR LYS TYR GLY ILE ILE SER PRO THR ILE SEQRES 15 A 475 GLY PHE LEU ILE GLY SER ILE LEU MET PHE PHE SER ILE SEQRES 16 A 475 ILE LYS SER ILE ILE LYS HIS LYS TYR TYR PHE THR ILE SEQRES 17 A 475 LYS HIS PHE PRO HIS PHE LEU LYS LEU PHE PHE PRO THR SEQRES 18 A 475 PHE MET THR MET VAL VAL SER GLN ILE ASN THR VAL VAL SEQRES 19 A 475 ASP MET ASN VAL VAL SER PHE TYR ASP LYS GLY SER ILE SEQRES 20 A 475 SER TYR LEU GLN TYR ALA SER ARG PHE TYR LEU LEU PRO SEQRES 21 A 475 TYR GLY LEU PHE ALA VAL SER VAL SER THR VAL VAL LEU SEQRES 22 A 475 SER LYS ILE SER ASN ASP ARG LYS ASN PHE ASN TYR HIS SEQRES 23 A 475 LEU ASN ASP ALA LEU LYS THR THR LEU PHE PHE THR ILE SEQRES 24 A 475 PRO SER MET VAL GLY LEU ILE PHE LEU SER THR PRO ILE SEQRES 25 A 475 ILE ARG PHE PHE TYR GLU HIS GLY ALA PHE THR SER LYS SEQRES 26 A 475 ASP THR LEU ILE THR SER LYS ILE LEU ILE ALA TYR THR SEQRES 27 A 475 LEU GLY LEU PRO PHE TYR GLY ILE TYR SER THR ILE SER SEQRES 28 A 475 ARG SER TYR HIS ALA ILE LYS ASN THR LYS THR PRO PHE SEQRES 29 A 475 ILE ALA ALA THR ILE VAL SER LEU SER ASN ILE ILE LEU SEQRES 30 A 475 ASP ILE ILE PHE GLY LEU LYS TYR GLY PRO ILE GLY VAL SEQRES 31 A 475 ALA LEU ALA THR SER ILE ALA GLY ILE ILE GLY VAL LEU SEQRES 32 A 475 TYR LEU LEU PHE SER VAL LYS THR PHE PRO ILE LYS ASP SEQRES 33 A 475 PHE LEU LYS ILE SER LEU ASN SER LEU ILE MET LEU PHE SEQRES 34 A 475 VAL ILE TYR LEU THR ASP PHE THR ASP ASN GLU PHE TRP SEQRES 35 A 475 PHE LEU ILE GLN ILE LEU ILE GLY ILE LEU VAL TYR LEU SEQRES 36 A 475 ILE PHE SER SER ILE PHE TYR ARG ASP LEU ILE ARG ARG SEQRES 37 A 475 PHE LEU TYR ALA ARG LYS LYS SEQRES 1 B 475 MET SER ILE LEU PHE SER SER ILE LEU PHE SER ILE ALA SEQRES 2 B 475 THR PHE PHE SER ARG ILE LEU GLY LEU PHE ARG ASP VAL SEQRES 3 B 475 LEU PHE ALA LYS TYR PHE GLY VAL SER TYR GLU LEU ASP SEQRES 4 B 475 ALA TYR PHE ILE ALA ILE MET PHE PRO PHE PHE LEU ARG SEQRES 5 B 475 LYS VAL PHE GLY GLU GLY ALA MET SER SER ALA PHE VAL SEQRES 6 B 475 PRO LEU TYR SER GLU LYS SER GLY GLU GLU LYS ASP LYS SEQRES 7 B 475 PHE LEU SER SER VAL ILE ASN GLY PHE SER LEU ILE ILE SEQRES 8 B 475 LEU ALA LEU VAL ILE LEU SER TYR PHE PHE PRO GLU LEU SEQRES 9 B 475 ILE ILE ASN LEU PHE GLY ALA GLY SER SER HIS GLU THR SEQRES 10 B 475 LYS ILE LEU ALA LYS LYS LEU LEU LEU ILE THR SER PRO SEQRES 11 B 475 SER ILE TYR PHE ILE PHE LEU TRP ALA ILE SER TYR SER SEQRES 12 B 475 ILE LEU ASN THR ASN ASN LYS PHE PHE TRP PRO ALA LEU SEQRES 13 B 475 THR PRO SER ILE SER ASN ILE THR ILE ILE ILE GLY THR SEQRES 14 B 475 PHE LEU SER THR LYS TYR GLY ILE ILE SER PRO THR ILE SEQRES 15 B 475 GLY PHE LEU ILE GLY SER ILE LEU MET PHE PHE SER ILE SEQRES 16 B 475 ILE LYS SER ILE ILE LYS HIS LYS TYR TYR PHE THR ILE SEQRES 17 B 475 LYS HIS PHE PRO HIS PHE LEU LYS LEU PHE PHE PRO THR SEQRES 18 B 475 PHE MET THR MET VAL VAL SER GLN ILE ASN THR VAL VAL SEQRES 19 B 475 ASP MET ASN VAL VAL SER PHE TYR ASP LYS GLY SER ILE SEQRES 20 B 475 SER TYR LEU GLN TYR ALA SER ARG PHE TYR LEU LEU PRO SEQRES 21 B 475 TYR GLY LEU PHE ALA VAL SER VAL SER THR VAL VAL LEU SEQRES 22 B 475 SER LYS ILE SER ASN ASP ARG LYS ASN PHE ASN TYR HIS SEQRES 23 B 475 LEU ASN ASP ALA LEU LYS THR THR LEU PHE PHE THR ILE SEQRES 24 B 475 PRO SER MET VAL GLY LEU ILE PHE LEU SER THR PRO ILE SEQRES 25 B 475 ILE ARG PHE PHE TYR GLU HIS GLY ALA PHE THR SER LYS SEQRES 26 B 475 ASP THR LEU ILE THR SER LYS ILE LEU ILE ALA TYR THR SEQRES 27 B 475 LEU GLY LEU PRO PHE TYR GLY ILE TYR SER THR ILE SER SEQRES 28 B 475 ARG SER TYR HIS ALA ILE LYS ASN THR LYS THR PRO PHE SEQRES 29 B 475 ILE ALA ALA THR ILE VAL SER LEU SER ASN ILE ILE LEU SEQRES 30 B 475 ASP ILE ILE PHE GLY LEU LYS TYR GLY PRO ILE GLY VAL SEQRES 31 B 475 ALA LEU ALA THR SER ILE ALA GLY ILE ILE GLY VAL LEU SEQRES 32 B 475 TYR LEU LEU PHE SER VAL LYS THR PHE PRO ILE LYS ASP SEQRES 33 B 475 PHE LEU LYS ILE SER LEU ASN SER LEU ILE MET LEU PHE SEQRES 34 B 475 VAL ILE TYR LEU THR ASP PHE THR ASP ASN GLU PHE TRP SEQRES 35 B 475 PHE LEU ILE GLN ILE LEU ILE GLY ILE LEU VAL TYR LEU SEQRES 36 B 475 ILE PHE SER SER ILE PHE TYR ARG ASP LEU ILE ARG ARG SEQRES 37 B 475 PHE LEU TYR ALA ARG LYS LYS HET NA A 501 1 HET CL A 502 1 HET CL A 503 1 HET CL A 504 1 HET ZN A 505 1 HET OLB A 506 42 HET CL B 501 1 HET CL B 502 1 HET CL B 503 1 HET ZN B 504 1 HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETNAM ZN ZINC ION HETNAM OLB (2S)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE FORMUL 3 NA NA 1+ FORMUL 4 CL 6(CL 1-) FORMUL 7 ZN 2(ZN 2+) FORMUL 8 OLB C21 H40 O4 HELIX 1 AA1 LEU A 4 PHE A 32 1 29 HELIX 2 AA2 SER A 35 GLY A 56 1 22 HELIX 3 AA3 MET A 60 LYS A 71 1 12 HELIX 4 AA4 GLY A 73 PHE A 101 1 29 HELIX 5 AA5 PHE A 101 ALA A 111 1 11 HELIX 6 AA6 SER A 114 SER A 129 1 16 HELIX 7 AA7 PRO A 130 ASN A 148 1 19 HELIX 8 AA8 PHE A 151 THR A 157 1 7 HELIX 9 AA9 THR A 157 LEU A 171 1 15 HELIX 10 AB1 LEU A 171 GLY A 176 1 6 HELIX 11 AB2 ILE A 177 SER A 194 1 18 HELIX 12 AB3 ILE A 196 LYS A 201 1 6 HELIX 13 AB4 HIS A 210 SER A 240 1 31 HELIX 14 AB5 GLY A 245 ALA A 265 1 21 HELIX 15 AB6 VAL A 266 VAL A 268 5 3 HELIX 16 AB7 SER A 269 ASP A 279 1 11 HELIX 17 AB8 ASN A 282 LEU A 308 1 27 HELIX 18 AB9 LEU A 308 GLU A 318 1 11 HELIX 19 AC1 THR A 323 LEU A 339 1 17 HELIX 20 AC2 GLY A 340 ILE A 357 1 18 HELIX 21 AC3 THR A 360 LYS A 410 1 51 HELIX 22 AC4 PRO A 413 THR A 434 1 22 HELIX 23 AC5 PHE A 441 TYR A 462 1 22 HELIX 24 AC6 TYR A 462 PHE A 469 1 8 HELIX 25 AC7 ILE B 8 PHE B 32 1 25 HELIX 26 AC8 SER B 35 GLU B 57 1 23 HELIX 27 AC9 GLY B 58 GLU B 70 1 13 HELIX 28 AD1 SER B 72 PHE B 101 1 30 HELIX 29 AD2 PHE B 101 ALA B 111 1 11 HELIX 30 AD3 SER B 114 SER B 129 1 16 HELIX 31 AD4 PRO B 130 ASN B 148 1 19 HELIX 32 AD5 PHE B 152 THR B 157 1 6 HELIX 33 AD6 THR B 157 LEU B 171 1 15 HELIX 34 AD7 LEU B 171 GLY B 176 1 6 HELIX 35 AD8 ILE B 177 ILE B 195 1 19 HELIX 36 AD9 ILE B 196 LYS B 201 1 6 HELIX 37 AE1 HIS B 210 PHE B 241 1 32 HELIX 38 AE2 GLY B 245 ALA B 265 1 21 HELIX 39 AE3 VAL B 266 VAL B 268 5 3 HELIX 40 AE4 SER B 269 ASP B 279 1 11 HELIX 41 AE5 ASN B 282 LEU B 308 1 27 HELIX 42 AE6 LEU B 308 GLU B 318 1 11 HELIX 43 AE7 THR B 323 LEU B 339 1 17 HELIX 44 AE8 GLY B 340 ILE B 357 1 18 HELIX 45 AE9 THR B 360 GLY B 386 1 27 HELIX 46 AF1 GLY B 386 LYS B 410 1 25 HELIX 47 AF2 PRO B 413 THR B 434 1 22 HELIX 48 AF3 PHE B 441 TYR B 462 1 22 HELIX 49 AF4 TYR B 462 ARG B 467 1 6 LINK ND1 HIS A 210 ZN ZN A 505 1555 1555 2.10 LINK ND1 HIS A 213 ZN ZN A 505 1555 1555 2.07 LINK OD1 ASP A 235 NA NA A 501 1555 1555 2.43 LINK OD1 ASN A 374 NA NA A 501 1555 1555 2.46 LINK OD1 ASP A 378 NA NA A 501 1555 1555 2.42 LINK O VAL A 390 NA NA A 501 1555 1555 2.43 LINK OG1 THR A 394 NA NA A 501 1555 1555 2.40 LINK ND1 HIS B 210 ZN ZN B 504 1555 1555 2.06 LINK ND1 HIS B 213 ZN ZN B 504 1555 1555 2.06 SITE 1 AC1 6 ASP A 235 ASN A 374 ASP A 378 VAL A 390 SITE 2 AC1 6 ALA A 393 THR A 394 SITE 1 AC2 3 TYR A 41 ILE A 45 ARG A 255 SITE 1 AC3 5 LYS A 71 HIS A 210 HIS A 213 CL A 504 SITE 2 AC3 5 ZN A 505 SITE 1 AC4 4 HIS A 210 HIS A 213 CL A 503 ZN A 505 SITE 1 AC5 4 HIS A 210 HIS A 213 CL A 503 CL A 504 SITE 1 AC6 6 TYR A 175 ILE A 178 SER A 179 ILE A 182 SITE 2 AC6 6 GLY A 183 GLU B 70 SITE 1 AC7 2 TYR B 41 ARG B 255 SITE 1 AC8 5 LYS B 71 HIS B 210 HIS B 213 CL B 503 SITE 2 AC8 5 ZN B 504 SITE 1 AC9 4 LYS B 71 HIS B 210 CL B 502 ZN B 504 SITE 1 AD1 4 HIS B 210 HIS B 213 CL B 502 CL B 503 CRYST1 71.134 101.759 158.516 90.00 90.00 90.00 P 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014058 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009827 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006309 0.00000