HEADER OXIDOREDUCTASE 13-DEC-18 6ND7 TITLE THE CRYSTAL STRUCTURE OF TERB CO-CRYSTALLIZED WITH POLYPORIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: TERB OXIDOREDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES; SOURCE 3 ORGANISM_TAXID: 1883; SOURCE 4 STRAIN: STREPTOMYCES SP LC 6-2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NADPH REDUCTASE, NATURAL PRODUCTS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.A.CLINGER,S.I.ELSHAHAWI,Y.ZHANG,R.P.HALL,Y.LIU,J.S.THORSON, AUTHOR 2 G.N.PHILLIPS JR. REVDAT 2 13-MAR-24 6ND7 1 REMARK REVDAT 1 18-DEC-19 6ND7 0 JRNL AUTH J.A.CLINGER,S.I.ELSHAHAWI,Y.ZHANG,R.P.HALL,Y.LIU,M.D.MILLER, JRNL AUTH 2 J.S.THORSON,G.N.PHILLIPS JR. JRNL TITL STRUCTURE AND FUNCTION OF TERFESTATIN BIOSYNTHESIS ENZYMES JRNL TITL 2 TERB AND TERC JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 137194 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.118 REMARK 3 R VALUE (WORKING SET) : 0.116 REMARK 3 FREE R VALUE : 0.147 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6859 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.4507 - 4.2249 0.98 4776 252 0.1548 0.1559 REMARK 3 2 4.2249 - 3.3537 0.99 4641 245 0.1070 0.1325 REMARK 3 3 3.3537 - 2.9298 0.99 4561 240 0.1094 0.1346 REMARK 3 4 2.9298 - 2.6620 0.99 4551 239 0.1032 0.1355 REMARK 3 5 2.6620 - 2.4712 0.99 4523 238 0.0985 0.1240 REMARK 3 6 2.4712 - 2.3255 0.99 4470 236 0.0931 0.1175 REMARK 3 7 2.3255 - 2.2090 0.98 4481 236 0.0912 0.1273 REMARK 3 8 2.2090 - 2.1129 0.98 4467 235 0.0927 0.1219 REMARK 3 9 2.1129 - 2.0315 0.98 4418 232 0.0946 0.1469 REMARK 3 10 2.0315 - 1.9614 0.97 4413 233 0.0941 0.1391 REMARK 3 11 1.9614 - 1.9001 0.98 4428 233 0.0927 0.1303 REMARK 3 12 1.9001 - 1.8458 0.97 4383 230 0.0964 0.1377 REMARK 3 13 1.8458 - 1.7972 0.97 4366 230 0.0975 0.1354 REMARK 3 14 1.7972 - 1.7533 0.97 4379 231 0.0943 0.1420 REMARK 3 15 1.7533 - 1.7135 0.97 4387 230 0.0991 0.1562 REMARK 3 16 1.7135 - 1.6770 0.97 4355 230 0.0996 0.1421 REMARK 3 17 1.6770 - 1.6435 0.97 4356 229 0.1030 0.1562 REMARK 3 18 1.6435 - 1.6124 0.96 4324 228 0.1094 0.1437 REMARK 3 19 1.6124 - 1.5837 0.96 4290 225 0.1143 0.1751 REMARK 3 20 1.5837 - 1.5568 0.96 4338 229 0.1231 0.1647 REMARK 3 21 1.5568 - 1.5317 0.96 4281 225 0.1461 0.2019 REMARK 3 22 1.5317 - 1.5081 0.96 4307 226 0.1585 0.2030 REMARK 3 23 1.5081 - 1.4859 0.95 4299 226 0.1653 0.2117 REMARK 3 24 1.4859 - 1.4650 0.96 4287 226 0.1717 0.2090 REMARK 3 25 1.4650 - 1.4452 0.95 4260 224 0.1805 0.2276 REMARK 3 26 1.4452 - 1.4264 0.96 4275 224 0.2073 0.2527 REMARK 3 27 1.4264 - 1.4086 0.93 4224 223 0.2302 0.2698 REMARK 3 28 1.4086 - 1.3916 0.93 4155 218 0.2488 0.3124 REMARK 3 29 1.3916 - 1.3755 0.87 3911 205 0.2902 0.3163 REMARK 3 30 1.3755 - 1.3600 0.77 3429 181 0.3183 0.3356 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ND7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1000238256. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033, 1.319 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 292990 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.250 REMARK 200 RESOLUTION RANGE LOW (A) : 47.422 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 82.9 REMARK 200 DATA REDUNDANCY : 2.080 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 25.7 REMARK 200 DATA REDUNDANCY IN SHELL : 1.23 REMARK 200 R MERGE FOR SHELL (I) : 1.77200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1:1 6MG/ML TERB PROTEIN 3MM POLYPORIC REMARK 280 ACID IN 33% ISOPROPYL TO 25% PEG 3350, 200 MM NACL, 100MM HEPES, REMARK 280 PH 7.5. CRYOPROTECTED WITH 20% GLYCEROL ADDITION TO MOTHER REMARK 280 LIQUOR, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.24900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.97750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.49550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.97750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.24900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.49550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 SER A 307 REMARK 465 GLU A 308 REMARK 465 SER A 309 REMARK 465 ARG A 310 REMARK 465 HIS A 311 REMARK 465 SER A 312 REMARK 465 ALA A 313 REMARK 465 VAL A 314 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 SER B 307 REMARK 465 GLU B 308 REMARK 465 SER B 309 REMARK 465 ARG B 310 REMARK 465 HIS B 311 REMARK 465 SER B 312 REMARK 465 ALA B 313 REMARK 465 VAL B 314 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 190 CE NZ REMARK 470 GLU A 203 CG CD OE1 OE2 REMARK 470 ARG A 249 CD NE CZ NH1 NH2 REMARK 470 ARG A 258 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 265 CG CD OE1 OE2 REMARK 470 HIS B 0 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 190 CG CD CE NZ REMARK 470 GLU B 203 CG CD OE1 OE2 REMARK 470 ARG B 222 NE CZ NH1 NH2 REMARK 470 GLU B 265 CG CD OE1 OE2 REMARK 470 ARG B 286 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 865 O HOH B 872 2.00 REMARK 500 OH TYR A 188 O HOH A 501 2.02 REMARK 500 O HOH A 706 O HOH A 895 2.03 REMARK 500 O HOH A 530 O HOH A 533 2.03 REMARK 500 O HOH A 826 O HOH A 847 2.03 REMARK 500 O HOH B 783 O HOH B 864 2.04 REMARK 500 O HOH B 824 O HOH B 842 2.04 REMARK 500 O HOH B 501 O HOH B 776 2.04 REMARK 500 O HOH B 786 O HOH B 822 2.05 REMARK 500 O HOH A 866 O HOH A 890 2.06 REMARK 500 O HOH B 784 O HOH B 800 2.08 REMARK 500 O HOH A 614 O HOH A 701 2.08 REMARK 500 O HOH B 511 O HOH B 692 2.08 REMARK 500 O HOH A 509 O HOH A 529 2.09 REMARK 500 O HOH B 786 O HOH B 794 2.09 REMARK 500 O HOH A 504 O HOH A 508 2.09 REMARK 500 O HOH A 626 O HOH A 796 2.10 REMARK 500 O HOH A 525 O HOH A 635 2.10 REMARK 500 O HOH B 561 O HOH B 792 2.10 REMARK 500 O HOH A 514 O HOH A 857 2.11 REMARK 500 O HOH B 509 O HOH B 776 2.11 REMARK 500 O HOH B 643 O HOH B 843 2.12 REMARK 500 OD2 ASP B 136 O HOH B 501 2.12 REMARK 500 O HOH A 582 O HOH A 690 2.13 REMARK 500 O HOH B 530 O HOH B 596 2.13 REMARK 500 OE2 GLU B 269 O HOH B 502 2.13 REMARK 500 O HOH B 669 O HOH B 769 2.14 REMARK 500 O HOH A 515 O HOH A 819 2.15 REMARK 500 O HOH A 819 O HOH A 840 2.17 REMARK 500 O HOH A 756 O HOH A 770 2.17 REMARK 500 O HOH B 527 O HOH B 616 2.17 REMARK 500 O GLY A 137 O HOH A 502 2.17 REMARK 500 OD1 ASN A 164 O HOH A 503 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 132 O HOH B 649 4455 1.97 REMARK 500 OE1 GLU B 21 O HOH A 881 2554 2.02 REMARK 500 O HOH A 799 O HOH A 828 3655 2.04 REMARK 500 O HOH A 759 O HOH A 863 3645 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 105 30.52 -98.47 REMARK 500 SER A 115 -154.57 -120.52 REMARK 500 GLN A 123 -87.08 -101.94 REMARK 500 LEU A 142 76.56 -160.28 REMARK 500 LEU A 142 73.79 -160.77 REMARK 500 ASN A 173 -153.53 -92.39 REMARK 500 HIS A 301 49.61 -140.26 REMARK 500 SER B 115 -155.88 -116.08 REMARK 500 GLN B 123 -146.35 -113.84 REMARK 500 GLN B 123 -146.35 -116.81 REMARK 500 LEU B 142 75.16 -161.39 REMARK 500 LEU B 142 73.61 -161.05 REMARK 500 ASN B 173 -153.69 -88.54 REMARK 500 ASN B 173 -150.60 -88.54 REMARK 500 SER B 209 65.76 -120.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 906 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH A 907 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH A 908 DISTANCE = 6.99 ANGSTROMS REMARK 525 HOH A 909 DISTANCE = 7.14 ANGSTROMS REMARK 525 HOH A 910 DISTANCE = 7.50 ANGSTROMS REMARK 525 HOH A 911 DISTANCE = 8.69 ANGSTROMS REMARK 525 HOH B 872 DISTANCE = 6.34 ANGSTROMS REMARK 525 HOH B 873 DISTANCE = 6.57 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NDP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KJG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NDP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KJG B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA B 408 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6D2V RELATED DB: PDB REMARK 900 APO STRUCTURE OF TERB DBREF 6ND7 A -19 314 PDB 6ND7 6ND7 -19 314 DBREF 6ND7 B -19 314 PDB 6ND7 6ND7 -19 314 SEQRES 1 A 334 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 334 LEU VAL PRO ARG GLY SER HIS MET GLU GLY LYS LYS ILE SEQRES 3 A 334 LEU VAL THR GLY GLY THR GLY GLN VAL ALA ARG PRO VAL SEQRES 4 A 334 ALA GLU ALA LEU ALA GLU ARG ASN GLU VAL TRP CYS LEU SEQRES 5 A 334 GLY ARG PHE GLY THR PRO GLY VAL GLU LYS GLU LEU ASN SEQRES 6 A 334 ASP ARG GLY ILE THR THR PHE HIS TRP ASP MET ASP ASP SEQRES 7 A 334 PRO GLY ALA ALA ALA TYR GLU GLY LEU PRO ASP ASP PHE SEQRES 8 A 334 THR HIS VAL LEU HIS SER ALA VAL ARG ARG GLY GLU ASP SEQRES 9 A 334 GLY ASP VAL ASN ALA ALA VAL GLU VAL ASN SER VAL ALA SEQRES 10 A 334 CYS GLY ARG LEU MET THR HIS CYS ARG GLY ALA GLU ALA SEQRES 11 A 334 PHE LEU PHE VAL SER THR GLY ALA LEU TYR LYS ARG GLN SEQRES 12 A 334 THR LEU ASP HIS ALA TYR THR GLU ASP ASP PRO VAL ASP SEQRES 13 A 334 GLY VAL ALA ASP TRP LEU PRO ALA TYR PRO VAL GLY LYS SEQRES 14 A 334 ILE ALA ALA GLU GLY ALA VAL ARG ALA PHE ALA GLN VAL SEQRES 15 A 334 LEU ASN LEU PRO THR THR ILE ALA ARG LEU ASN ILE ALA SEQRES 16 A 334 TYR GLY PRO GLY GLY TYR GLY GLY VAL PRO MET LEU TYR SEQRES 17 A 334 PHE LYS ARG MET LEU ALA GLY GLU PRO ILE PRO VAL PRO SEQRES 18 A 334 LYS GLU GLY GLN ASN TRP CYS SER LEU LEU HIS THR ASP SEQRES 19 A 334 ASP LEU VAL ALA HIS VAL PRO ARG LEU TRP GLU ALA ALA SEQRES 20 A 334 ALA THR PRO ALA THR LEU VAL ASN TRP GLY GLY ASP GLU SEQRES 21 A 334 ALA VAL GLY ILE THR ASP CYS VAL ARG TYR LEU GLU GLU SEQRES 22 A 334 LEU THR GLY VAL ARG ALA ARG LEU VAL PRO SER GLU VAL SEQRES 23 A 334 THR ARG GLU THR TYR ARG PHE ASP PRO THR ARG ARG ARG SEQRES 24 A 334 GLU ILE THR GLY PRO CYS ARG VAL PRO TRP ARG GLU GLY SEQRES 25 A 334 VAL ARG ARG THR LEU GLN ALA LEU HIS PRO GLU HIS LEU SEQRES 26 A 334 PRO SER GLU SER ARG HIS SER ALA VAL SEQRES 1 B 334 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 334 LEU VAL PRO ARG GLY SER HIS MET GLU GLY LYS LYS ILE SEQRES 3 B 334 LEU VAL THR GLY GLY THR GLY GLN VAL ALA ARG PRO VAL SEQRES 4 B 334 ALA GLU ALA LEU ALA GLU ARG ASN GLU VAL TRP CYS LEU SEQRES 5 B 334 GLY ARG PHE GLY THR PRO GLY VAL GLU LYS GLU LEU ASN SEQRES 6 B 334 ASP ARG GLY ILE THR THR PHE HIS TRP ASP MET ASP ASP SEQRES 7 B 334 PRO GLY ALA ALA ALA TYR GLU GLY LEU PRO ASP ASP PHE SEQRES 8 B 334 THR HIS VAL LEU HIS SER ALA VAL ARG ARG GLY GLU ASP SEQRES 9 B 334 GLY ASP VAL ASN ALA ALA VAL GLU VAL ASN SER VAL ALA SEQRES 10 B 334 CYS GLY ARG LEU MET THR HIS CYS ARG GLY ALA GLU ALA SEQRES 11 B 334 PHE LEU PHE VAL SER THR GLY ALA LEU TYR LYS ARG GLN SEQRES 12 B 334 THR LEU ASP HIS ALA TYR THR GLU ASP ASP PRO VAL ASP SEQRES 13 B 334 GLY VAL ALA ASP TRP LEU PRO ALA TYR PRO VAL GLY LYS SEQRES 14 B 334 ILE ALA ALA GLU GLY ALA VAL ARG ALA PHE ALA GLN VAL SEQRES 15 B 334 LEU ASN LEU PRO THR THR ILE ALA ARG LEU ASN ILE ALA SEQRES 16 B 334 TYR GLY PRO GLY GLY TYR GLY GLY VAL PRO MET LEU TYR SEQRES 17 B 334 PHE LYS ARG MET LEU ALA GLY GLU PRO ILE PRO VAL PRO SEQRES 18 B 334 LYS GLU GLY GLN ASN TRP CYS SER LEU LEU HIS THR ASP SEQRES 19 B 334 ASP LEU VAL ALA HIS VAL PRO ARG LEU TRP GLU ALA ALA SEQRES 20 B 334 ALA THR PRO ALA THR LEU VAL ASN TRP GLY GLY ASP GLU SEQRES 21 B 334 ALA VAL GLY ILE THR ASP CYS VAL ARG TYR LEU GLU GLU SEQRES 22 B 334 LEU THR GLY VAL ARG ALA ARG LEU VAL PRO SER GLU VAL SEQRES 23 B 334 THR ARG GLU THR TYR ARG PHE ASP PRO THR ARG ARG ARG SEQRES 24 B 334 GLU ILE THR GLY PRO CYS ARG VAL PRO TRP ARG GLU GLY SEQRES 25 B 334 VAL ARG ARG THR LEU GLN ALA LEU HIS PRO GLU HIS LEU SEQRES 26 B 334 PRO SER GLU SER ARG HIS SER ALA VAL HET NDP A 401 74 HET KJG A 402 22 HET GOL A 403 13 HET GOL A 404 14 HET NDP B 401 74 HET KJG B 402 22 HET GOL B 403 14 HET GOL B 404 12 HET GOL B 405 14 HET GOL B 406 24 HET GOL B 407 28 HET IPA B 408 12 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE HETNAM KJG 2~3~,2~6~-DIHYDROXY[1~1~,2~1~:2~4~,3~1~-TERPHENYL]- HETNAM 2 KJG 2~2~,2~5~-DIONE HETNAM GOL GLYCEROL HETNAM IPA ISOPROPYL ALCOHOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN IPA 2-PROPANOL FORMUL 3 NDP 2(C21 H30 N7 O17 P3) FORMUL 4 KJG 2(C18 H12 O4) FORMUL 5 GOL 7(C3 H8 O3) FORMUL 14 IPA C3 H8 O FORMUL 15 HOH *784(H2 O) HELIX 1 AA1 PRO A -4 MET A 1 5 6 HELIX 2 AA2 VAL A 15 GLU A 25 1 11 HELIX 3 AA3 GLY A 39 ARG A 47 1 9 HELIX 4 AA4 ALA A 61 GLU A 65 5 5 HELIX 5 AA5 ASP A 86 CYS A 105 1 20 HELIX 6 AA6 PRO A 143 ASN A 164 1 22 HELIX 7 AA7 GLY A 183 GLY A 195 1 13 HELIX 8 AA8 THR A 213 ALA A 226 1 14 HELIX 9 AA9 ILE A 244 GLY A 256 1 13 HELIX 10 AB1 PRO A 275 GLY A 283 1 9 HELIX 11 AB2 PRO A 288 HIS A 301 1 14 HELIX 12 AB3 PRO A 302 LEU A 305 5 4 HELIX 13 AB4 VAL B 15 ALA B 24 1 10 HELIX 14 AB5 GLY B 39 ASP B 46 1 8 HELIX 15 AB6 ALA B 61 GLU B 65 5 5 HELIX 16 AB7 ASP B 86 CYS B 105 1 20 HELIX 17 AB8 ALA B 118 TYR B 120 5 3 HELIX 18 AB9 PRO B 143 ASN B 164 1 22 HELIX 19 AC1 GLY B 183 GLY B 195 1 13 HELIX 20 AC2 THR B 213 ALA B 226 1 14 HELIX 21 AC3 ILE B 244 GLY B 256 1 13 HELIX 22 AC4 PRO B 275 GLY B 283 1 9 HELIX 23 AC5 PRO B 288 HIS B 301 1 14 HELIX 24 AC6 PRO B 302 LEU B 305 5 4 SHEET 1 AA1 7 THR A 50 HIS A 53 0 SHEET 2 AA1 7 GLU A 28 GLY A 33 1 N CYS A 31 O THR A 50 SHEET 3 AA1 7 LYS A 5 THR A 9 1 N ILE A 6 O GLU A 28 SHEET 4 AA1 7 HIS A 73 HIS A 76 1 O LEU A 75 N LEU A 7 SHEET 5 AA1 7 ALA A 110 THR A 116 1 O LEU A 112 N HIS A 76 SHEET 6 AA1 7 THR A 167 LEU A 172 1 O ALA A 170 N SER A 115 SHEET 7 AA1 7 THR A 232 TRP A 236 1 O THR A 232 N ILE A 169 SHEET 1 AA2 2 ALA A 128 TYR A 129 0 SHEET 2 AA2 2 ARG A 272 PHE A 273 1 O ARG A 272 N TYR A 129 SHEET 1 AA3 2 ALA A 175 TYR A 176 0 SHEET 2 AA3 2 LEU A 211 HIS A 212 1 O LEU A 211 N TYR A 176 SHEET 1 AA4 2 ILE A 198 PRO A 201 0 SHEET 2 AA4 2 LEU A 261 SER A 264 1 O SER A 264 N VAL A 200 SHEET 1 AA5 2 TRP A 207 CYS A 208 0 SHEET 2 AA5 2 VAL A 242 GLY A 243 -1 O VAL A 242 N CYS A 208 SHEET 1 AA6 7 THR B 50 HIS B 53 0 SHEET 2 AA6 7 GLU B 28 GLY B 33 1 N CYS B 31 O THR B 50 SHEET 3 AA6 7 LYS B 5 THR B 9 1 N VAL B 8 O TRP B 30 SHEET 4 AA6 7 HIS B 73 HIS B 76 1 O LEU B 75 N LEU B 7 SHEET 5 AA6 7 ALA B 110 THR B 116 1 O LEU B 112 N HIS B 76 SHEET 6 AA6 7 THR B 167 LEU B 172 1 O THR B 168 N PHE B 113 SHEET 7 AA6 7 THR B 232 TRP B 236 1 O THR B 232 N ILE B 169 SHEET 1 AA7 2 ALA B 128 TYR B 129 0 SHEET 2 AA7 2 ARG B 272 PHE B 273 1 O ARG B 272 N TYR B 129 SHEET 1 AA8 2 ALA B 175 TYR B 176 0 SHEET 2 AA8 2 LEU B 211 HIS B 212 1 O LEU B 211 N TYR B 176 SHEET 1 AA9 2 PRO B 197 PRO B 201 0 SHEET 2 AA9 2 ARG B 260 SER B 264 1 O ARG B 260 N ILE B 198 SHEET 1 AB1 2 TRP B 207 CYS B 208 0 SHEET 2 AB1 2 VAL B 242 GLY B 243 -1 O VAL B 242 N CYS B 208 CISPEP 1 THR A 229 PRO A 230 0 -0.64 CISPEP 2 THR B 229 PRO B 230 0 -0.48 SITE 1 AC1 38 GLY A 10 THR A 12 GLY A 13 GLN A 14 SITE 2 AC1 38 VAL A 15 GLY A 33 ARG A 34 PHE A 35 SITE 3 AC1 38 TRP A 54 ASP A 55 MET A 56 ASP A 57 SITE 4 AC1 38 SER A 77 ALA A 78 VAL A 79 ARG A 81 SITE 5 AC1 38 VAL A 114 SER A 115 TYR A 145 LYS A 149 SITE 6 AC1 38 LEU A 172 ASN A 173 ALA A 175 KJG A 402 SITE 7 AC1 38 HOH A 521 HOH A 534 HOH A 548 HOH A 576 SITE 8 AC1 38 HOH A 580 HOH A 617 HOH A 625 HOH A 631 SITE 9 AC1 38 HOH A 649 HOH A 655 HOH A 670 HOH A 673 SITE 10 AC1 38 HOH A 699 HOH A 705 SITE 1 AC2 15 ARG A 81 THR A 116 GLY A 117 ALA A 118 SITE 2 AC2 15 TRP A 141 TYR A 145 LEU A 172 ILE A 174 SITE 3 AC2 15 TYR A 181 VAL A 184 ARG A 268 GLU A 269 SITE 4 AC2 15 THR A 270 NDP A 401 HOH A 567 SITE 1 AC3 3 THR A 103 ARG A 106 ARG B 106 SITE 1 AC4 6 GLU A 240 CYS A 285 VAL A 287 HOH A 513 SITE 2 AC4 6 HOH A 606 HOH A 661 SITE 1 AC5 35 GLY B 10 THR B 12 GLY B 13 GLN B 14 SITE 2 AC5 35 VAL B 15 ARG B 34 PHE B 35 TRP B 54 SITE 3 AC5 35 ASP B 55 MET B 56 SER B 77 ALA B 78 SITE 4 AC5 35 VAL B 79 ARG B 81 VAL B 114 SER B 115 SITE 5 AC5 35 TYR B 145 LYS B 149 LEU B 172 ASN B 173 SITE 6 AC5 35 ALA B 175 KJG B 402 HOH B 515 HOH B 579 SITE 7 AC5 35 HOH B 587 HOH B 593 HOH B 599 HOH B 611 SITE 8 AC5 35 HOH B 622 HOH B 625 HOH B 629 HOH B 680 SITE 9 AC5 35 HOH B 701 HOH B 708 HOH B 746 SITE 1 AC6 15 ARG B 81 THR B 116 GLY B 117 ALA B 118 SITE 2 AC6 15 TYR B 145 LEU B 172 ILE B 174 TYR B 181 SITE 3 AC6 15 ARG B 268 TYR B 271 NDP B 401 HOH B 512 SITE 4 AC6 15 HOH B 515 HOH B 545 HOH B 550 SITE 1 AC7 7 GLU A 303 TRP B 207 GLY B 243 ASP B 246 SITE 2 AC7 7 TRP B 289 ARG B 290 HOH B 687 SITE 1 AC8 7 ARG B 80 ARG B 81 GLY B 82 GLU B 83 SITE 2 AC8 7 ASP B 84 HOH B 531 HOH B 556 SITE 1 AC9 6 THR A 276 ARG A 277 GLU A 280 VAL B 257 SITE 2 AC9 6 ARG B 258 HOH B 546 SITE 1 AD1 7 GLU B 109 TRP B 224 GLU B 225 ALA B 227 SITE 2 AD1 7 HOH B 507 HOH B 535 HOH B 576 SITE 1 AD2 4 HOH A 551 ALA B 61 ARG B 100 HIS B 104 SITE 1 AD3 6 GLY B 66 ASP B 126 HOH B 528 HOH B 643 SITE 2 AD3 6 HOH B 666 HOH B 705 CRYST1 58.498 80.991 139.955 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017095 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012347 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007145 0.00000