HEADER TRANSCRIPTION 18-DEC-18 6NEZ TITLE TRYPANOSOMA BRUCEI - BDF5, TB427TMP.01.5000 A, SOLVED WITH PF-CBP1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI BRUCEI (STRAIN 927/4 SOURCE 3 GUTAT10.1); SOURCE 4 ORGANISM_TAXID: 185431; SOURCE 5 STRAIN: 927/4 GUTAT10.1; SOURCE 6 GENE: TB11.01.5000; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET15-MHL KEYWDS TB427TMP, PF-CBP1, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR Y.H.LIN,A.DONG,W.TEMPEL,J.MCAULEY,P.LOPPNAU,C.BOUNTRA,C.H.ARROWSMITH, AUTHOR 2 A.M.EDWARDS,R.HUI,M.VEDADI,R.J.HARDING,STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (SGC) REVDAT 2 11-OCT-23 6NEZ 1 REMARK REVDAT 1 23-JAN-19 6NEZ 0 JRNL AUTH Y.H.LIN,A.DONG,W.TEMPEL,J.MCAULEY,P.LOPPNAU,C.BOUNTRA, JRNL AUTH 2 C.H.ARROWSMITH,A.M.EDWARDS,M.VEDADI,R.J.HARDING, JRNL AUTH 3 STRUCTURAL GENOMICS CONSORTIUM (SGC) JRNL TITL TRYPANOSOMA BRUCEI - BDF5, TB427TMP.01.5000 A, SOLVED WITH JRNL TITL 2 PF-CBP1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 34783 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1087 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2474 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.30 REMARK 3 BIN R VALUE (WORKING SET) : 0.2990 REMARK 3 BIN FREE R VALUE SET COUNT : 83 REMARK 3 BIN FREE R VALUE : 0.3780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3559 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 130 REMARK 3 SOLVENT ATOMS : 113 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.88000 REMARK 3 B22 (A**2) : 0.47000 REMARK 3 B33 (A**2) : -2.35000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.201 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.181 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.153 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.422 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3763 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3437 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5101 ; 1.492 ; 1.638 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7935 ; 1.314 ; 1.624 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 461 ; 5.416 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 198 ;34.658 ;22.323 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 596 ;14.947 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;14.882 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 478 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4603 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 790 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6NEZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1000238585. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35904 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : 0.98100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.2 REMARK 200 STARTING MODEL: 5K29 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.27 M NA FORMATE, AND 0.1M NA ACETATE REMARK 280 PH4.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.09000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.09000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 29.49700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 75.74650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 29.49700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 75.74650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 78.09000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 29.49700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 75.74650 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 78.09000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 29.49700 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 75.74650 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLN A 3 REMARK 465 ASN A 4 REMARK 465 ARG A 5 REMARK 465 GLY A 122 REMARK 465 ARG A 123 REMARK 465 ARG A 124 REMARK 465 LEU A 125 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLN B 3 REMARK 465 ASN B 4 REMARK 465 GLY B 121 REMARK 465 GLY B 122 REMARK 465 ARG B 123 REMARK 465 ARG B 124 REMARK 465 LEU B 125 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 GLN C 3 REMARK 465 ASN C 4 REMARK 465 ARG C 5 REMARK 465 GLY C 122 REMARK 465 ARG C 123 REMARK 465 ARG C 124 REMARK 465 LEU C 125 REMARK 465 MET D 1 REMARK 465 SER D 2 REMARK 465 GLN D 3 REMARK 465 ASN D 4 REMARK 465 ARG D 5 REMARK 465 GLY D 121 REMARK 465 GLY D 122 REMARK 465 ARG D 123 REMARK 465 ARG D 124 REMARK 465 LEU D 125 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 6 CG CD OE1 NE2 REMARK 470 ARG A 19 CZ NH1 NH2 REMARK 470 GLU A 94 CG CD OE1 OE2 REMARK 470 LYS A 106 CD CE NZ REMARK 470 ARG B 5 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 94 CG CD OE1 OE2 REMARK 470 LYS B 111 NZ REMARK 470 VAL B 120 CG1 CG2 REMARK 470 GLN C 6 CG CD OE1 NE2 REMARK 470 GLU C 12 CG CD OE1 OE2 REMARK 470 LYS C 47 CD CE NZ REMARK 470 LYS C 106 CG CD CE NZ REMARK 470 LYS C 111 NZ REMARK 470 VAL C 120 CG1 CG2 REMARK 470 GLN D 6 CD OE1 NE2 REMARK 470 GLU D 12 CG CD OE1 OE2 REMARK 470 GLN D 32 CG CD OE1 NE2 REMARK 470 LYS D 47 CD CE NZ REMARK 470 GLU D 94 CG CD OE1 OE2 REMARK 470 LYS D 106 CG CD CE NZ REMARK 470 LYS D 111 CE NZ REMARK 470 LYS D 119 NZ REMARK 470 VAL D 120 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN B 32 O HOH B 301 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 KJS B 201 REMARK 610 KJS C 201 REMARK 610 KJS D 201 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KJS A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KJS B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KJS C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KJS D 201 DBREF 6NEZ A 1 125 UNP Q382J7 Q382J7_TRYB2 1 125 DBREF 6NEZ B 1 125 UNP Q382J7 Q382J7_TRYB2 1 125 DBREF 6NEZ C 1 125 UNP Q382J7 Q382J7_TRYB2 1 125 DBREF 6NEZ D 1 125 UNP Q382J7 Q382J7_TRYB2 1 125 SEQRES 1 A 125 MET SER GLN ASN ARG GLN LEU LEU TYR PRO ARG GLU GLU SEQRES 2 A 125 MET VAL SER LEU VAL ARG SER LEU ASP ARG PRO GLN GLU SEQRES 3 A 125 ASN GLY LEU PHE SER GLN ASP VAL LEU LEU GLN TYR PRO SEQRES 4 A 125 GLU LEU ALA GLU SER TYR THR LYS VAL CYS PRO ASN ARG SEQRES 5 A 125 CYS ASP LEU ALA THR ALA ALA ASP ARG ALA ALA LYS GLY SEQRES 6 A 125 ALA TYR GLY TYR ASP VAL GLN LEU THR THR LEU LYS GLU SEQRES 7 A 125 ASP ILE ARG LEU MET VAL ASN ASN CYS ILE LEU PHE ASN SEQRES 8 A 125 GLY ALA GLU GLY ALA TYR ALA ASP ALA ALA ARG THR PHE SEQRES 9 A 125 GLU LYS PHE ALA MET GLY LYS ILE ASP ALA TYR ILE SER SEQRES 10 A 125 GLN LYS VAL GLY GLY ARG ARG LEU SEQRES 1 B 125 MET SER GLN ASN ARG GLN LEU LEU TYR PRO ARG GLU GLU SEQRES 2 B 125 MET VAL SER LEU VAL ARG SER LEU ASP ARG PRO GLN GLU SEQRES 3 B 125 ASN GLY LEU PHE SER GLN ASP VAL LEU LEU GLN TYR PRO SEQRES 4 B 125 GLU LEU ALA GLU SER TYR THR LYS VAL CYS PRO ASN ARG SEQRES 5 B 125 CYS ASP LEU ALA THR ALA ALA ASP ARG ALA ALA LYS GLY SEQRES 6 B 125 ALA TYR GLY TYR ASP VAL GLN LEU THR THR LEU LYS GLU SEQRES 7 B 125 ASP ILE ARG LEU MET VAL ASN ASN CYS ILE LEU PHE ASN SEQRES 8 B 125 GLY ALA GLU GLY ALA TYR ALA ASP ALA ALA ARG THR PHE SEQRES 9 B 125 GLU LYS PHE ALA MET GLY LYS ILE ASP ALA TYR ILE SER SEQRES 10 B 125 GLN LYS VAL GLY GLY ARG ARG LEU SEQRES 1 C 125 MET SER GLN ASN ARG GLN LEU LEU TYR PRO ARG GLU GLU SEQRES 2 C 125 MET VAL SER LEU VAL ARG SER LEU ASP ARG PRO GLN GLU SEQRES 3 C 125 ASN GLY LEU PHE SER GLN ASP VAL LEU LEU GLN TYR PRO SEQRES 4 C 125 GLU LEU ALA GLU SER TYR THR LYS VAL CYS PRO ASN ARG SEQRES 5 C 125 CYS ASP LEU ALA THR ALA ALA ASP ARG ALA ALA LYS GLY SEQRES 6 C 125 ALA TYR GLY TYR ASP VAL GLN LEU THR THR LEU LYS GLU SEQRES 7 C 125 ASP ILE ARG LEU MET VAL ASN ASN CYS ILE LEU PHE ASN SEQRES 8 C 125 GLY ALA GLU GLY ALA TYR ALA ASP ALA ALA ARG THR PHE SEQRES 9 C 125 GLU LYS PHE ALA MET GLY LYS ILE ASP ALA TYR ILE SER SEQRES 10 C 125 GLN LYS VAL GLY GLY ARG ARG LEU SEQRES 1 D 125 MET SER GLN ASN ARG GLN LEU LEU TYR PRO ARG GLU GLU SEQRES 2 D 125 MET VAL SER LEU VAL ARG SER LEU ASP ARG PRO GLN GLU SEQRES 3 D 125 ASN GLY LEU PHE SER GLN ASP VAL LEU LEU GLN TYR PRO SEQRES 4 D 125 GLU LEU ALA GLU SER TYR THR LYS VAL CYS PRO ASN ARG SEQRES 5 D 125 CYS ASP LEU ALA THR ALA ALA ASP ARG ALA ALA LYS GLY SEQRES 6 D 125 ALA TYR GLY TYR ASP VAL GLN LEU THR THR LEU LYS GLU SEQRES 7 D 125 ASP ILE ARG LEU MET VAL ASN ASN CYS ILE LEU PHE ASN SEQRES 8 D 125 GLY ALA GLU GLY ALA TYR ALA ASP ALA ALA ARG THR PHE SEQRES 9 D 125 GLU LYS PHE ALA MET GLY LYS ILE ASP ALA TYR ILE SER SEQRES 10 D 125 GLN LYS VAL GLY GLY ARG ARG LEU HET KJS A 201 36 HET UNX A 202 1 HET UNX A 203 1 HET KJS B 201 35 HET UNX B 202 1 HET UNX B 203 1 HET KJS C 201 27 HET UNX C 202 1 HET KJS D 201 27 HETNAM KJS 5-(3,5-DIMETHYL-1,2-OXAZOL-4-YL)-1-[2-(MORPHOLIN-4-YL) HETNAM 2 KJS ETHYL]-2-[2-(4-PROPOXYPHENYL)ETHYL]-1H-BENZIMIDAZOLE HETNAM UNX UNKNOWN ATOM OR ION FORMUL 5 KJS 4(C29 H36 N4 O3) FORMUL 6 UNX 5(X) FORMUL 14 HOH *113(H2 O) HELIX 1 AA1 PRO A 10 SER A 20 1 11 HELIX 2 AA2 LEU A 21 ASP A 22 5 2 HELIX 3 AA3 ARG A 23 ASN A 27 5 5 HELIX 4 AA4 ASP A 33 TYR A 38 1 6 HELIX 5 AA5 LEU A 41 CYS A 49 1 9 HELIX 6 AA6 ASP A 54 LYS A 64 1 11 HELIX 7 AA7 LEU A 73 GLY A 92 1 20 HELIX 8 AA8 GLY A 95 GLY A 121 1 27 HELIX 9 AA9 PRO B 10 LEU B 21 1 12 HELIX 10 AB1 ASP B 22 ASN B 27 5 6 HELIX 11 AB2 ASP B 33 TYR B 38 1 6 HELIX 12 AB3 LEU B 41 CYS B 49 1 9 HELIX 13 AB4 ASP B 54 LYS B 64 1 11 HELIX 14 AB5 LEU B 73 GLY B 92 1 20 HELIX 15 AB6 GLY B 95 VAL B 120 1 26 HELIX 16 AB7 PRO C 10 LEU C 21 1 12 HELIX 17 AB8 ASP C 22 ASN C 27 5 6 HELIX 18 AB9 ASP C 33 TYR C 38 1 6 HELIX 19 AC1 LEU C 41 CYS C 49 1 9 HELIX 20 AC2 ASP C 54 LYS C 64 1 11 HELIX 21 AC3 LEU C 73 GLY C 92 1 20 HELIX 22 AC4 GLY C 95 GLY C 121 1 27 HELIX 23 AC5 PRO D 10 SER D 20 1 11 HELIX 24 AC6 LEU D 21 ASP D 22 5 2 HELIX 25 AC7 ARG D 23 ASN D 27 5 5 HELIX 26 AC8 ASP D 33 TYR D 38 1 6 HELIX 27 AC9 LEU D 41 CYS D 49 1 9 HELIX 28 AD1 ASP D 54 LYS D 64 1 11 HELIX 29 AD2 LEU D 73 GLY D 92 1 20 HELIX 30 AD3 GLY D 95 VAL D 120 1 26 SITE 1 AC1 11 ASN A 27 GLY A 28 LEU A 29 GLN A 37 SITE 2 AC1 11 TYR A 38 PHE A 90 ASN A 91 ALA A 96 SITE 3 AC1 11 TYR A 97 HOH A 301 LEU B 36 SITE 1 AC2 12 LEU A 36 HOH A 302 ASN B 27 GLY B 28 SITE 2 AC2 12 LEU B 29 GLN B 37 TYR B 38 PHE B 90 SITE 3 AC2 12 ASN B 91 ALA B 96 TYR B 97 HOH B 304 SITE 1 AC3 8 ASN C 27 LEU C 29 VAL C 34 GLN C 37 SITE 2 AC3 8 TYR C 38 PHE C 90 ASN C 91 TYR C 97 SITE 1 AC4 8 ASN D 27 LEU D 29 GLN D 37 TYR D 38 SITE 2 AC4 8 PHE D 90 ASN D 91 TYR D 97 HOH D 306 CRYST1 58.994 151.493 156.180 90.00 90.00 90.00 C 2 2 21 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016951 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006601 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006403 0.00000