HEADER METAL BINDING PROTEIN/INHIBITOR 18-DEC-18 6NF1 TITLE VAV1 INHIBITED BY AN ALLOSTERIC INHIBITOR: VAV1 INHIBITORS BLOCK GEF TITLE 2 ACTIVITY COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTO-ONCOGENE VAV; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: VAV1, VAV; SOURCE 6 EXPRESSION_SYSTEM: UNIDENTIFIED BACULOVIRUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10469 KEYWDS GEF, RAC, VAV1, INHIBITOR, METAL BINDING PROTEIN-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.S.KNAPP,R.A.ELLING,E.ORNELAS REVDAT 2 11-OCT-23 6NF1 1 REMARK REVDAT 1 25-DEC-19 6NF1 0 JRNL AUTH M.GERSPACHER,P.R.SKAANDERUP JRNL TITL ALLOSTERIC INHIBITORS OF VAV1 BLOCK GUANINE NUCLEOTIDE JRNL TITL 2 EXCHANGE ACTIVITY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.13 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 20756 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.790 REMARK 3 FREE R VALUE TEST SET COUNT : 994 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.74 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3000 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2280 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2844 REMARK 3 BIN R VALUE (WORKING SET) : 0.2246 REMARK 3 BIN FREE R VALUE : 0.2906 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 156 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4410 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 46 REMARK 3 SOLVENT ATOMS : 55 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 70.93 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -13.88910 REMARK 3 B22 (A**2) : 7.34270 REMARK 3 B33 (A**2) : 6.54640 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 6.99870 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.340 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.610 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.275 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.660 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.282 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.936 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4571 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 6172 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1647 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 128 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 675 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4571 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 2 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 580 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5054 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.08 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.89 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.61 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 22.1950 5.5822 18.3637 REMARK 3 T TENSOR REMARK 3 T11: -0.1274 T22: -0.1331 REMARK 3 T33: -0.1552 T12: -0.0501 REMARK 3 T13: -0.0205 T23: -0.0313 REMARK 3 L TENSOR REMARK 3 L11: 0.6453 L22: 1.5176 REMARK 3 L33: 1.3828 L12: -0.0019 REMARK 3 L13: 0.3880 L23: -0.1782 REMARK 3 S TENSOR REMARK 3 S11: -0.0008 S12: -0.0294 S13: 0.0192 REMARK 3 S21: 0.0787 S22: 0.0099 S23: -0.0299 REMARK 3 S31: 0.0569 S32: 0.0152 S33: -0.0092 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6NF1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1000238677. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9774 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.3.3 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20808 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 48.130 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : 0.70500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6NEW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16-22% (V/V) ETHYLENE GLYCOL, 0.1M REMARK 280 TRIS PH 7.3, AND 15% (W/V) POLYETHYLENE GLYCOL 8000., VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.87100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 GLU A 133 REMARK 465 GLU A 134 REMARK 465 SER A 135 REMARK 465 VAL A 136 REMARK 465 GLY A 137 REMARK 465 ASP A 138 REMARK 465 VAL A 153 REMARK 465 GLU A 154 REMARK 465 VAL A 183 REMARK 465 SER A 184 REMARK 465 MET A 185 REMARK 465 PRO A 186 REMARK 465 PRO A 187 REMARK 465 GLY A 460 REMARK 465 ASP A 461 REMARK 465 ARG A 462 REMARK 465 ARG A 566 REMARK 465 HIS A 567 REMARK 465 GLY A 568 REMARK 465 GLN A 569 REMARK 465 ASP A 570 REMARK 465 PHE A 571 REMARK 465 PRO A 572 REMARK 465 GLY A 573 REMARK 465 THR A 574 REMARK 465 MET A 575 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 2 CD OE1 OE2 REMARK 470 ARG A 58 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 65 CG CD OE1 NE2 REMARK 470 LYS A 89 CG CD CE NZ REMARK 470 ARG A 90 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 139 CG CD OE1 OE2 REMARK 470 ASP A 150 CG OD1 OD2 REMARK 470 ASP A 151 CG OD1 OD2 REMARK 470 GLU A 155 CG CD OE1 OE2 REMARK 470 GLU A 157 CG CD OE1 OE2 REMARK 470 GLU A 166 CG CD OE1 OE2 REMARK 470 LYS A 188 CG CD CE NZ REMARK 470 LYS A 252 CG CD CE NZ REMARK 470 GLN A 348 CG CD OE1 NE2 REMARK 470 LYS A 353 CG CD CE NZ REMARK 470 GLU A 354 CD OE1 OE2 REMARK 470 GLU A 415 CG CD OE1 OE2 REMARK 470 ARG A 416 CD NE CZ NH1 NH2 REMARK 470 ARG A 417 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 463 CG OD1 OD2 REMARK 470 LYS A 465 CG CD CE NZ REMARK 470 ARG A 489 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 550 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 64 46.20 -94.68 REMARK 500 GLN A 65 -70.02 -36.53 REMARK 500 ALA A 96 -39.55 -39.96 REMARK 500 VAL A 102 45.85 33.57 REMARK 500 ARG A 124 9.30 -69.82 REMARK 500 ARG A 179 109.42 -49.72 REMARK 500 MET A 189 -177.14 -65.30 REMARK 500 PHE A 220 -65.69 -121.25 REMARK 500 ILE A 238 -121.50 56.05 REMARK 500 GLN A 348 62.69 -114.86 REMARK 500 TYR A 507 79.41 -116.03 REMARK 500 ASN A 510 15.20 83.78 REMARK 500 GLN A 533 -5.04 66.86 REMARK 500 TYR A 541 60.09 29.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 604 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 516 ND1 REMARK 620 2 CYS A 546 SG 119.6 REMARK 620 3 CYS A 549 SG 111.1 107.4 REMARK 620 4 CYS A 564 SG 117.9 98.5 100.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 603 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 529 SG REMARK 620 2 CYS A 532 SG 114.5 REMARK 620 3 HIS A 554 ND1 110.3 93.5 REMARK 620 4 CYS A 557 SG 117.6 110.0 108.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9JY A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 604 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6NEW RELATED DB: PDB REMARK 900 APO AND N-TERMINAL TRUNCATION OF SAME PROTEIN DBREF 6NF1 A 2 575 UNP P15498 VAV_HUMAN 2 575 SEQADV 6NF1 GLY A -2 UNP P15498 EXPRESSION TAG SEQADV 6NF1 SER A -1 UNP P15498 EXPRESSION TAG SEQADV 6NF1 GLY A 0 UNP P15498 EXPRESSION TAG SEQADV 6NF1 SER A 1 UNP P15498 EXPRESSION TAG SEQRES 1 A 578 GLY SER GLY SER GLU LEU TRP ARG GLN CYS THR HIS TRP SEQRES 2 A 578 LEU ILE GLN CYS ARG VAL LEU PRO PRO SER HIS ARG VAL SEQRES 3 A 578 THR TRP ASP GLY ALA GLN VAL CYS GLU LEU ALA GLN ALA SEQRES 4 A 578 LEU ARG ASP GLY VAL LEU LEU CYS GLN LEU LEU ASN ASN SEQRES 5 A 578 LEU LEU PRO HIS ALA ILE ASN LEU ARG GLU VAL ASN LEU SEQRES 6 A 578 ARG PRO GLN MET SER GLN PHE LEU CYS LEU LYS ASN ILE SEQRES 7 A 578 ARG THR PHE LEU SER THR CYS CYS GLU LYS PHE GLY LEU SEQRES 8 A 578 LYS ARG SER GLU LEU PHE GLU ALA PHE ASP LEU PHE ASP SEQRES 9 A 578 VAL GLN ASP PHE GLY LYS VAL ILE TYR THR LEU SER ALA SEQRES 10 A 578 LEU SER TRP THR PRO ILE ALA GLN ASN ARG GLY ILE MET SEQRES 11 A 578 PRO PHE PRO THR GLU GLU GLU SER VAL GLY ASP GLU ASP SEQRES 12 A 578 ILE TYR SER GLY LEU SER ASP GLN ILE ASP ASP THR VAL SEQRES 13 A 578 GLU GLU ASP GLU ASP LEU TYR ASP CYS VAL GLU ASN GLU SEQRES 14 A 578 GLU ALA GLU GLY ASP GLU ILE TYR GLU ASP LEU MET ARG SEQRES 15 A 578 SER GLU PRO VAL SER MET PRO PRO LYS MET THR GLU TYR SEQRES 16 A 578 ASP LYS ARG CYS CYS CYS LEU ARG GLU ILE GLN GLN THR SEQRES 17 A 578 GLU GLU LYS TYR THR ASP THR LEU GLY SER ILE GLN GLN SEQRES 18 A 578 HIS PHE LEU LYS PRO LEU GLN ARG PHE LEU LYS PRO GLN SEQRES 19 A 578 ASP ILE GLU ILE ILE PHE ILE ASN ILE GLU ASP LEU LEU SEQRES 20 A 578 ARG VAL HIS THR HIS PHE LEU LYS GLU MET LYS GLU ALA SEQRES 21 A 578 LEU GLY THR PRO GLY ALA ALA ASN LEU TYR GLN VAL PHE SEQRES 22 A 578 ILE LYS TYR LYS GLU ARG PHE LEU VAL TYR GLY ARG TYR SEQRES 23 A 578 CYS SER GLN VAL GLU SER ALA SER LYS HIS LEU ASP ARG SEQRES 24 A 578 VAL ALA ALA ALA ARG GLU ASP VAL GLN MET LYS LEU GLU SEQRES 25 A 578 GLU CYS SER GLN ARG ALA ASN ASN GLY ARG PHE THR LEU SEQRES 26 A 578 ARG ASP LEU LEU MET VAL PRO MET GLN ARG VAL LEU LYS SEQRES 27 A 578 TYR HIS LEU LEU LEU GLN GLU LEU VAL LYS HIS THR GLN SEQRES 28 A 578 GLU ALA MET GLU LYS GLU ASN LEU ARG LEU ALA LEU ASP SEQRES 29 A 578 ALA MET ARG ASP LEU ALA GLN CYS VAL ASN GLU VAL LYS SEQRES 30 A 578 ARG ASP ASN GLU THR LEU ARG GLN ILE THR ASN PHE GLN SEQRES 31 A 578 LEU SER ILE GLU ASN LEU ASP GLN SER LEU ALA HIS TYR SEQRES 32 A 578 GLY ARG PRO LYS ILE ASP GLY GLU LEU LYS ILE THR SER SEQRES 33 A 578 VAL GLU ARG ARG SER LYS MET ASP ARG TYR ALA PHE LEU SEQRES 34 A 578 LEU ASP LYS ALA LEU LEU ILE CYS LYS ARG ARG GLY ASP SEQRES 35 A 578 SER TYR ASP LEU LYS ASP PHE VAL ASN LEU HIS SER PHE SEQRES 36 A 578 GLN VAL ARG ASP ASP SER SER GLY ASP ARG ASP ASN LYS SEQRES 37 A 578 LYS TRP SER HIS MET PHE LEU LEU ILE GLU ASP GLN GLY SEQRES 38 A 578 ALA GLN GLY TYR GLU LEU PHE PHE LYS THR ARG GLU LEU SEQRES 39 A 578 LYS LYS LYS TRP MET GLU GLN PHE GLU MET ALA ILE SER SEQRES 40 A 578 ASN ILE TYR PRO GLU ASN ALA THR ALA ASN GLY HIS ASP SEQRES 41 A 578 PHE GLN MET PHE SER PHE GLU GLU THR THR SER CYS LYS SEQRES 42 A 578 ALA CYS GLN MET LEU LEU ARG GLY THR PHE TYR GLN GLY SEQRES 43 A 578 TYR ARG CYS HIS ARG CYS ARG ALA SER ALA HIS LYS GLU SEQRES 44 A 578 CYS LEU GLY ARG VAL PRO PRO CYS GLY ARG HIS GLY GLN SEQRES 45 A 578 ASP PHE PRO GLY THR MET HET 9JY A 601 32 HET MES A 602 12 HET ZN A 603 1 HET ZN A 604 1 HETNAM 9JY (2S)-3-[(3S)-1-(ETHYLSULFONYL)PIPERIDIN-3-YL]-2-{[3-(4- HETNAM 2 9JY METHYLPHENYL)IMIDAZO[1,2-A]PYRAZIN-8-YL]AMINO}PROPAN- HETNAM 3 9JY 1-OL HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM ZN ZINC ION FORMUL 2 9JY C23 H31 N5 O3 S FORMUL 3 MES C6 H13 N O4 S FORMUL 4 ZN 2(ZN 2+) FORMUL 6 HOH *55(H2 O) HELIX 1 AA1 GLU A 2 CYS A 14 1 13 HELIX 2 AA2 GLN A 29 ARG A 38 1 10 HELIX 3 AA3 GLY A 40 LEU A 51 1 12 HELIX 4 AA4 ASN A 56 VAL A 60 5 5 HELIX 5 AA5 SER A 67 LYS A 85 1 19 HELIX 6 AA6 GLU A 95 ASP A 101 1 7 HELIX 7 AA7 ASP A 104 TRP A 117 1 14 HELIX 8 AA8 THR A 118 ASN A 123 1 6 HELIX 9 AA9 GLY A 144 ILE A 149 1 6 HELIX 10 AB1 GLU A 157 ASP A 161 5 5 HELIX 11 AB2 GLU A 167 ARG A 179 1 13 HELIX 12 AB3 THR A 190 PHE A 220 1 31 HELIX 13 AB4 PHE A 220 GLN A 225 1 6 HELIX 14 AB5 LYS A 229 ILE A 238 1 10 HELIX 15 AB6 ASN A 239 THR A 260 1 22 HELIX 16 AB7 ASN A 265 PHE A 277 1 13 HELIX 17 AB8 VAL A 279 ARG A 301 1 23 HELIX 18 AB9 ARG A 301 ASN A 317 1 17 HELIX 19 AC1 THR A 321 LEU A 326 1 6 HELIX 20 AC2 MET A 327 HIS A 346 1 20 HELIX 21 AC3 GLU A 349 SER A 389 1 41 HELIX 22 AC4 SER A 396 TYR A 400 5 5 HELIX 23 AC5 THR A 488 TYR A 507 1 20 HELIX 24 AC6 THR A 512 HIS A 516 5 5 HELIX 25 AC7 HIS A 554 VAL A 561 5 8 SHEET 1 AA1 8 ILE A 390 GLU A 391 0 SHEET 2 AA1 8 SER A 440 ASN A 448 1 O TYR A 441 N GLU A 391 SHEET 3 AA1 8 ALA A 430 ARG A 437 -1 N LYS A 435 O ASP A 442 SHEET 4 AA1 8 MET A 420 LEU A 427 -1 N TYR A 423 O CYS A 434 SHEET 5 AA1 8 PRO A 403 THR A 412 -1 N ILE A 405 O LEU A 426 SHEET 6 AA1 8 GLY A 481 PHE A 486 -1 O PHE A 485 N LYS A 410 SHEET 7 AA1 8 HIS A 469 GLU A 475 -1 N PHE A 471 O LEU A 484 SHEET 8 AA1 8 PHE A 452 ASP A 456 -1 N ARG A 455 O LEU A 472 SHEET 1 AA2 3 PHE A 518 PHE A 521 0 SHEET 2 AA2 3 GLY A 543 CYS A 546 -1 O ARG A 545 N GLN A 519 SHEET 3 AA2 3 SER A 552 ALA A 553 -1 O ALA A 553 N TYR A 544 LINK ND1 HIS A 516 ZN ZN A 604 1555 1555 1.92 LINK SG CYS A 529 ZN ZN A 603 1555 1555 2.18 LINK SG CYS A 532 ZN ZN A 603 1555 1555 2.42 LINK SG CYS A 546 ZN ZN A 604 1555 1555 2.42 LINK SG CYS A 549 ZN ZN A 604 1555 1555 2.22 LINK ND1 HIS A 554 ZN ZN A 603 1555 1555 2.15 LINK SG CYS A 557 ZN ZN A 603 1555 1555 2.39 LINK SG CYS A 564 ZN ZN A 604 1555 1555 2.62 CISPEP 1 PHE A 129 PRO A 130 0 -7.21 SITE 1 AC1 18 PHE A 277 LEU A 278 TYR A 280 GLY A 281 SITE 2 AC1 18 ARG A 282 VAL A 333 CYS A 369 VAL A 373 SITE 3 AC1 18 PHE A 523 GLU A 524 GLU A 525 THR A 526 SITE 4 AC1 18 THR A 527 LEU A 535 LEU A 536 GLY A 538 SITE 5 AC1 18 GLN A 542 HOH A 709 SITE 1 AC2 7 GLU A 372 ARG A 402 LEU A 535 ARG A 537 SITE 2 AC2 7 TYR A 541 GLN A 542 HIS A 554 SITE 1 AC3 4 CYS A 529 CYS A 532 HIS A 554 CYS A 557 SITE 1 AC4 4 HIS A 516 CYS A 546 CYS A 549 CYS A 564 CRYST1 67.134 57.742 89.419 90.00 103.06 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014896 0.000000 0.003455 0.00000 SCALE2 0.000000 0.017318 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011480 0.00000