HEADER VIRUS LIKE PARTICLE 19-DEC-18 6NF9 TITLE STRUCTURE OF M. SPRETUS ENDOGENOUS VIRUS ELEMENT (EVE) VIRUS-LIKE TITLE 2 PARTICLE (VLP) COMPND MOL_ID: 1; COMPND 2 MOLECULE: MUS SPRETUS ENDOGENOUS VIRAL ELEMENT; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS SPRETUS; SOURCE 3 ORGANISM_TAXID: 10096; SOURCE 4 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS MUS SPRETUS, VLP, EVE, VIRUS LIKE PARTICLE EXPDTA ELECTRON MICROSCOPY AUTHOR H.M.CALLAWAY,S.SUBRAMANIAN REVDAT 4 20-MAR-24 6NF9 1 REMARK REVDAT 3 18-DEC-19 6NF9 1 SCALE REVDAT 2 13-MAR-19 6NF9 1 JRNL REVDAT 1 23-JAN-19 6NF9 0 JRNL AUTH H.M.CALLAWAY,S.SUBRAMANIAN,C.A.URBINA,K.N.BARNARD,R.A.DICK, JRNL AUTH 2 C.M.BATOR,S.L.HAFENSTEIN,R.J.GIFFORD,C.R.PARRISH JRNL TITL EXAMINATION AND RECONSTRUCTION OF THREE ANCIENT ENDOGENOUS JRNL TITL 2 PARVOVIRUS CAPSID PROTEIN GENE REMNANTS FOUND IN RODENT JRNL TITL 3 GENOMES. JRNL REF J. VIROL. V. 93 2019 JRNL REFN ESSN 1098-5514 JRNL PMID 30626673 JRNL DOI 10.1128/JVI.01542-18 REMARK 2 REMARK 2 RESOLUTION. 3.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION, GCTF, RELION, RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.890 REMARK 3 NUMBER OF PARTICLES : 6342 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6NF9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1000236077. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : PARVOVIRIDAE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : UNSPECIFIED REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 2082 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON III (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : DARK FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4500.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 2 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 2 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 3 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 3 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 3 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 4 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 4 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 4 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 5 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 5 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 5 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 7 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 7 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 7 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 8 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 8 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 8 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 9 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 9 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 9 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 10 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 10 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 10 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 11 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 12 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 12 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 12 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 13 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 13 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 13 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 14 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 14 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 14 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 15 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 15 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 15 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 16 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 17 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 17 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 17 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 18 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 18 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 18 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 19 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 19 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 19 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 20 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 20 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 20 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 21 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 21 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 21 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 22 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 22 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 22 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 23 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 23 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 23 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 24 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 24 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 24 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 25 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 25 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 25 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 26 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 26 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 26 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 27 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 27 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 27 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 28 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 28 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 28 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 29 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 29 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 29 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 30 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 30 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 30 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 31 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 31 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 31 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 32 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 32 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 32 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 33 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 33 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 33 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 34 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 34 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 34 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 35 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 35 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 35 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 36 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 36 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 36 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 37 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 37 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 37 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 38 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 38 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 38 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 39 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 39 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 39 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 40 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 40 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 40 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 41 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 41 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 41 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 42 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 42 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 42 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 43 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 43 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 43 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 44 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 44 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 44 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 45 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 45 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 45 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 46 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 46 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 46 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 47 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 47 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 47 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 48 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 48 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 48 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 49 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 49 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 49 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 50 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 50 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 50 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 51 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 51 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 51 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 52 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 52 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 52 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 53 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 53 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 53 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 54 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 54 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 54 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 55 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 55 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 55 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 56 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 56 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 56 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 57 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 57 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 57 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 58 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 58 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 58 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 59 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 59 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 59 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 60 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 60 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 60 0.309017 0.809017 -0.500000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 ASP A 6 REMARK 465 ALA A 7 REMARK 465 GLN A 8 REMARK 465 PRO A 9 REMARK 465 ASN A 10 REMARK 465 GLU A 11 REMARK 465 GLN A 12 REMARK 465 PRO A 13 REMARK 465 ASN A 14 REMARK 465 THR A 15 REMARK 465 GLY A 16 REMARK 465 ILE A 17 REMARK 465 GLU A 18 REMARK 465 LEU A 19 REMARK 465 ALA A 20 REMARK 465 THR A 21 REMARK 465 GLY A 22 REMARK 465 GLY A 23 REMARK 465 ASN A 24 REMARK 465 GLY A 25 REMARK 465 SER A 26 REMARK 465 GLY A 27 REMARK 465 SER A 28 REMARK 465 SER A 29 REMARK 465 GLY A 30 REMARK 465 GLY A 31 REMARK 465 GLY A 32 REMARK 465 GLY A 33 REMARK 465 ARG A 34 REMARK 465 GLY A 35 REMARK 465 ALA A 36 REMARK 465 GLY A 37 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 48 18.83 -143.88 REMARK 500 ASP A 57 21.57 39.82 REMARK 500 THR A 319 -165.87 -118.95 REMARK 500 ASP A 348 -31.23 -29.64 REMARK 500 ASP A 367 -16.72 71.78 REMARK 500 GLN A 383 83.32 61.09 REMARK 500 ILE A 384 127.33 -38.57 REMARK 500 ARG A 392 -57.16 -120.35 REMARK 500 TYR A 393 74.57 42.95 REMARK 500 GLN A 416 71.31 60.34 REMARK 500 ILE A 464 -65.09 -93.31 REMARK 500 ASN A 487 -164.54 -79.70 REMARK 500 GLN A 571 66.22 60.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-9363 RELATED DB: EMDB REMARK 900 MUS SPRETUS EVE VLP DBREF 6NF9 A 3 578 PDB 6NF9 6NF9 3 578 SEQRES 1 A 576 MET SER HIS ASP ALA GLN PRO ASN GLU GLN PRO ASN THR SEQRES 2 A 576 GLY ILE GLU LEU ALA THR GLY GLY ASN GLY SER GLY SER SEQRES 3 A 576 SER GLY GLY GLY GLY ARG GLY ALA GLY GLY VAL GLY VAL SEQRES 4 A 576 SER THR GLY SER PHE ASN ASN GLN THR GLU PHE HIS TYR SEQRES 5 A 576 LEU GLY ASP GLY LEU VAL GLN ILE THR ALA HIS ALA SER SEQRES 6 A 576 ARG LEU VAL HIS LEU ASN MET PRO GLU HIS GLU SER TYR SEQRES 7 A 576 ARG ARG ILE ASN VAL LEU ASN SER GLU ALA GLY VAL ALA SEQRES 8 A 576 GLY GLN MET VAL GLN ASP ASP ALA HIS SER GLN MET VAL SEQRES 9 A 576 THR PRO TRP SER LEU VAL ASP ALA ASN ALA TRP GLY VAL SEQRES 10 A 576 TRP PHE ASN PRO GLY ASP TRP GLN LEU ILE THR ASN ASN SEQRES 11 A 576 MET THR GLU LEU ASN LEU VAL SER PHE GLU GLN GLU ILE SEQRES 12 A 576 PHE ASN VAL VAL LEU LYS THR ILE THR GLU SER ALA THR SEQRES 13 A 576 THR PRO PRO THR LYS ILE TYR ASN ASN ASP LEU THR ALA SEQRES 14 A 576 SER LEU MET VAL ALA LEU ASP THR ASN ASN THR LEU PRO SEQRES 15 A 576 TYR THR PRO ALA ALA PRO ARG SER GLU THR LEU GLY PHE SEQRES 16 A 576 TYR PRO TRP LEU PRO THR LYS PRO THR HIS TYR ARG TYR SEQRES 17 A 576 TYR MET THR CYS THR ARG ASN LEU THR PRO PRO THR HIS SEQRES 18 A 576 THR GLY GLN ALA GLY THR ILE THR ASN THR ILE SER ALA SEQRES 19 A 576 PRO THR HIS SER ASP VAL MET PHE TYR THR ILE GLU ASN SEQRES 20 A 576 ALA VAL PRO ILE HIS LEU LEU ARG THR GLY ASP GLU PHE SEQRES 21 A 576 SER THR GLY THR TYR TYR PHE ASP THR LYS PRO LEU LYS SEQRES 22 A 576 MET THR HIS SER TRP GLN THR ASN ARG SER LEU GLY LEU SEQRES 23 A 576 PRO PRO LYS LEU ALA THR GLU PRO THR THR GLU GLY GLN SEQRES 24 A 576 GLN HIS THR GLY THR LEU LYS ALA ALA THR ASP ARG GLU SEQRES 25 A 576 GLY ILE HIS GLN THR ILE ASN ASN SER TYR THR GLU ALA SEQRES 26 A 576 THR ALA LEU ARG PRO ALA GLN VAL GLY TYR ASN THR PRO SEQRES 27 A 576 TYR MET ASN PHE GLU TYR SER ASP GLY GLY PRO PHE LEU SEQRES 28 A 576 THR PRO ILE VAL PRO VAL TYR ASP THR GLN TYR ASN ALA SEQRES 29 A 576 ASP GLU PRO ASN GLY ALA TYR ARG ILE THR MET GLY TYR SEQRES 30 A 576 GLN HIS GLY GLN ILE THR THR ALA THR GLU LEU GLY ARG SEQRES 31 A 576 TYR THR LEU ASN PRO ILE SER LYS GLY GLY ARG ALA PRO SEQRES 32 A 576 ASN GLN GLU PHE ASN GLN SER SER PRO LEU GLN MET GLU SEQRES 33 A 576 ASN THR LEU ASN GLY THR LEU LEU PRO THR ASP PRO ILE SEQRES 34 A 576 GLY GLY LYS THR ASP ILE HIS PHE THR ASN THR LEU ASN SEQRES 35 A 576 THR TYR GLY PRO LEU THR ALA LEU ASN ASN THR PRO PRO SEQRES 36 A 576 ILE TYR PRO ASN GLY GLN ILE TRP ASP LYS GLU LEU ASP SEQRES 37 A 576 ALA ASP LEU LYS PRO ARG LEU HIS VAL THR ALA PRO PHE SEQRES 38 A 576 VAL CYS LYS ASN ASN PRO PRO GLY GLN LEU PHE VAL LYS SEQRES 39 A 576 ILE ALA PRO ASN LEU THR ASP ASP PHE ASN ALA ASP SER SEQRES 40 A 576 PRO GLN GLN PRO ARG ILE ILE THR TYR SER ASN PHE TRP SEQRES 41 A 576 TRP LYS GLY THR LEU THR PHE THR ALA ARG MET ARG SER SEQRES 42 A 576 SER ASN MET TRP ASN PRO ILE HIS GLN HIS THR THR THR SEQRES 43 A 576 ASN ASP ASN ILE VAL ASN TYR MET PRO SER ASN ILE GLY SEQRES 44 A 576 GLY MET ARG LEU TYR PRO GLU ILE PRO GLN LEU ILE PRO SEQRES 45 A 576 ARG LYS LEU TYR HELIX 1 AA1 ALA A 116 TRP A 120 5 5 HELIX 2 AA2 ASN A 122 ASN A 132 1 11 HELIX 3 AA3 ALA A 404 GLU A 408 5 5 HELIX 4 AA4 HIS A 438 THR A 442 5 5 HELIX 5 AA5 ASN A 551 TYR A 555 5 5 SHEET 1 AA1 5 PRO A 161 ASN A 167 0 SHEET 2 AA1 5 MET A 133 ALA A 157 -1 N THR A 154 O ILE A 164 SHEET 3 AA1 5 THR A 517 MET A 533 -1 O THR A 530 N ASN A 137 SHEET 4 AA1 5 LEU A 59 ASN A 73 -1 N ILE A 62 O PHE A 529 SHEET 5 AA1 5 THR A 50 TYR A 54 -1 N GLU A 51 O THR A 63 SHEET 1 AA2 3 PRO A 161 ASN A 167 0 SHEET 2 AA2 3 MET A 133 ALA A 157 -1 N THR A 154 O ILE A 164 SHEET 3 AA2 3 GLU A 261 SER A 263 -1 O PHE A 262 N ILE A 145 SHEET 1 AA3 3 GLU A 261 SER A 263 0 SHEET 2 AA3 3 MET A 133 ALA A 157 -1 N ILE A 145 O PHE A 262 SHEET 3 AA3 3 TYR A 267 TYR A 268 -1 O TYR A 267 N PHE A 141 SHEET 1 AA4 3 TYR A 267 TYR A 268 0 SHEET 2 AA4 3 MET A 133 ALA A 157 -1 N PHE A 141 O TYR A 267 SHEET 3 AA4 3 LEU A 274 LYS A 275 -1 O LEU A 274 N LEU A 136 SHEET 1 AA5 3 ARG A 81 VAL A 85 0 SHEET 2 AA5 3 HIS A 102 VAL A 112 -1 O HIS A 102 N VAL A 85 SHEET 3 AA5 3 THR A 206 TYR A 211 -1 O TYR A 208 N TRP A 109 SHEET 1 AA6 5 ARG A 81 VAL A 85 0 SHEET 2 AA6 5 HIS A 102 VAL A 112 -1 O HIS A 102 N VAL A 85 SHEET 3 AA6 5 LEU A 493 ILE A 497 -1 O VAL A 495 N SER A 110 SHEET 4 AA6 5 LEU A 173 LEU A 177 -1 N MET A 174 O LYS A 496 SHEET 5 AA6 5 HIS A 254 LEU A 256 -1 O HIS A 254 N VAL A 175 SHEET 1 AA7 2 ARG A 216 ASN A 217 0 SHEET 2 AA7 2 THR A 233 ILE A 234 -1 O THR A 233 N ASN A 217 SHEET 1 AA8 2 HIS A 278 SER A 279 0 SHEET 2 AA8 2 PRO A 574 ARG A 575 1 O ARG A 575 N HIS A 278 SHEET 1 AA9 2 LEU A 292 THR A 294 0 SHEET 2 AA9 2 THR A 306 LEU A 307 -1 O THR A 306 N THR A 294 SHEET 1 AB1 2 GLN A 334 VAL A 335 0 SHEET 2 AB1 2 THR A 450 ALA A 451 1 O ALA A 451 N GLN A 334 SHEET 1 AB2 2 PHE A 344 SER A 347 0 SHEET 2 AB2 2 GLY A 350 LEU A 353 -1 O PHE A 352 N GLU A 345 SHEET 1 AB3 2 TYR A 373 ARG A 374 0 SHEET 2 AB3 2 THR A 394 LEU A 395 -1 O LEU A 395 N TYR A 373 SHEET 1 AB4 2 ASN A 410 GLN A 411 0 SHEET 2 AB4 2 THR A 424 LEU A 425 -1 O LEU A 425 N ASN A 410 SHEET 1 AB5 2 TRP A 465 LYS A 467 0 SHEET 2 AB5 2 PHE A 483 CYS A 485 1 O CYS A 485 N ASP A 466 CISPEP 1 THR A 219 PRO A 220 0 1.16 CISPEP 2 TYR A 459 PRO A 460 0 -3.77 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000