HEADER HYDROLASE 25-DEC-18 6NI0 TITLE CRYSTAL STRUCTURE OF THE BETA LACTAMASE CLASS D YBXI FROM BURKHOLDERIA TITLE 2 THAILANDENSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.5.2.6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA THAILANDENSIS; SOURCE 3 ORGANISM_TAXID: 57975; SOURCE 4 GENE: A8H35_26135, A8H36_11295; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS BETA LACTAMASE CLASS D, STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS OF INFECTIOUS DISEASES, HYDROLASE, CSGID EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,R.WU,R.ENDRES,G.BABNIGG,A.JOACHIMIAK,CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 4 15-NOV-23 6NI0 1 REMARK REVDAT 3 11-OCT-23 6NI0 1 REMARK REVDAT 2 18-DEC-19 6NI0 1 REMARK REVDAT 1 16-JAN-19 6NI0 0 JRNL AUTH Y.KIM,R.WU,R.ENDRES,G.BABNIGG,A.JOACHIMIAK, JRNL AUTH 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 3 (CSGID) JRNL TITL CRYSTAL STRUCTURE OF THE BETA LACTAMASE CLASS D YBXI FROM JRNL TITL 2 BURKHOLDERIA THAILANDENSIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 11673 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 580 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.6130 - 3.6454 1.00 2987 156 0.1851 0.1968 REMARK 3 2 3.6454 - 2.8936 1.00 2773 147 0.2135 0.2772 REMARK 3 3 2.8936 - 2.5279 1.00 2742 129 0.2474 0.2833 REMARK 3 4 2.5279 - 2.2968 0.96 2591 148 0.2615 0.3362 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2005 REMARK 3 ANGLE : 0.484 2728 REMARK 3 CHIRALITY : 0.038 290 REMARK 3 PLANARITY : 0.004 350 REMARK 3 DIHEDRAL : 23.991 722 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.0472 12.6811 88.6922 REMARK 3 T TENSOR REMARK 3 T11: 0.2896 T22: 0.3279 REMARK 3 T33: 0.2099 T12: -0.0061 REMARK 3 T13: -0.0082 T23: -0.0278 REMARK 3 L TENSOR REMARK 3 L11: 4.3555 L22: 4.0396 REMARK 3 L33: 2.6025 L12: -0.4659 REMARK 3 L13: 0.8525 L23: 0.5963 REMARK 3 S TENSOR REMARK 3 S11: 0.2175 S12: 0.0489 S13: 0.0931 REMARK 3 S21: 0.0210 S22: -0.3644 S23: -0.2674 REMARK 3 S31: 0.2963 S32: 0.6155 S33: 0.1457 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.5327 6.7277 79.2039 REMARK 3 T TENSOR REMARK 3 T11: 0.1567 T22: 0.1961 REMARK 3 T33: 0.1681 T12: 0.0037 REMARK 3 T13: 0.0355 T23: -0.0160 REMARK 3 L TENSOR REMARK 3 L11: 1.8819 L22: 1.7138 REMARK 3 L33: 1.6501 L12: 1.5623 REMARK 3 L13: -0.0960 L23: 0.7823 REMARK 3 S TENSOR REMARK 3 S11: 0.0579 S12: 0.0135 S13: -0.3439 REMARK 3 S21: -0.1072 S22: 0.0230 S23: 0.0207 REMARK 3 S31: 0.4219 S32: 0.3718 S33: 0.0226 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 63 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.1957 13.3310 72.4043 REMARK 3 T TENSOR REMARK 3 T11: 0.2707 T22: 0.3903 REMARK 3 T33: 0.4247 T12: -0.0542 REMARK 3 T13: -0.1055 T23: 0.0683 REMARK 3 L TENSOR REMARK 3 L11: 1.8632 L22: 0.9264 REMARK 3 L33: 1.5136 L12: 0.3707 REMARK 3 L13: -1.1450 L23: -0.6066 REMARK 3 S TENSOR REMARK 3 S11: -0.0056 S12: 0.2149 S13: 0.6659 REMARK 3 S21: -0.3514 S22: 0.3627 S23: 0.6480 REMARK 3 S31: 0.0917 S32: -0.6803 S33: -0.1911 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 83 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.3225 7.3698 79.1570 REMARK 3 T TENSOR REMARK 3 T11: 0.2502 T22: 0.2997 REMARK 3 T33: 0.3311 T12: -0.0502 REMARK 3 T13: -0.0614 T23: 0.0217 REMARK 3 L TENSOR REMARK 3 L11: 1.9957 L22: 2.2108 REMARK 3 L33: 1.3089 L12: 0.1243 REMARK 3 L13: 0.2146 L23: -0.8307 REMARK 3 S TENSOR REMARK 3 S11: -0.1984 S12: -0.0809 S13: -0.0696 REMARK 3 S21: -0.3662 S22: 0.1420 S23: 0.4932 REMARK 3 S31: -0.0713 S32: -0.2731 S33: 0.1206 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 175 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.0556 6.6233 72.4822 REMARK 3 T TENSOR REMARK 3 T11: 0.4048 T22: 0.2466 REMARK 3 T33: 0.1988 T12: -0.0281 REMARK 3 T13: 0.0154 T23: -0.0264 REMARK 3 L TENSOR REMARK 3 L11: 2.1145 L22: 1.5246 REMARK 3 L33: 1.2901 L12: -0.2917 REMARK 3 L13: 0.0893 L23: -0.2434 REMARK 3 S TENSOR REMARK 3 S11: -0.1961 S12: 0.1935 S13: -0.1831 REMARK 3 S21: -0.6323 S22: 0.0537 S23: -0.1029 REMARK 3 S31: 0.2248 S32: 0.0183 S33: 0.1566 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 176 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.5075 22.2374 82.1497 REMARK 3 T TENSOR REMARK 3 T11: 0.3356 T22: 0.1874 REMARK 3 T33: 0.3122 T12: -0.0255 REMARK 3 T13: 0.0177 T23: -0.0356 REMARK 3 L TENSOR REMARK 3 L11: 1.9888 L22: 1.2032 REMARK 3 L33: 4.0771 L12: 0.6690 REMARK 3 L13: -0.8624 L23: 1.0973 REMARK 3 S TENSOR REMARK 3 S11: 0.1741 S12: -0.1283 S13: 0.5433 REMARK 3 S21: 0.3495 S22: 0.0166 S23: 0.0055 REMARK 3 S31: -0.4538 S32: -0.2430 S33: -0.1696 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 196 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.2872 0.4435 85.8669 REMARK 3 T TENSOR REMARK 3 T11: 0.3009 T22: 0.2416 REMARK 3 T33: 0.3681 T12: 0.0386 REMARK 3 T13: 0.0895 T23: 0.0327 REMARK 3 L TENSOR REMARK 3 L11: 0.3779 L22: 5.1304 REMARK 3 L33: 0.6901 L12: -1.2516 REMARK 3 L13: -0.5133 L23: 0.6871 REMARK 3 S TENSOR REMARK 3 S11: -0.1114 S12: 0.0108 S13: -0.1773 REMARK 3 S21: -0.4897 S22: -0.0770 S23: 0.1564 REMARK 3 S31: 0.0609 S32: 0.0173 S33: 0.1790 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 216 THROUGH 255 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.0393 7.3793 91.3596 REMARK 3 T TENSOR REMARK 3 T11: 0.2628 T22: 0.2329 REMARK 3 T33: 0.2443 T12: -0.0064 REMARK 3 T13: 0.0376 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 3.1833 L22: 2.4129 REMARK 3 L33: 2.3685 L12: 0.7586 REMARK 3 L13: -0.5946 L23: -0.2457 REMARK 3 S TENSOR REMARK 3 S11: 0.0582 S12: -0.4468 S13: -0.2487 REMARK 3 S21: 0.3592 S22: -0.3317 S23: 0.1123 REMARK 3 S31: 0.0767 S32: 0.2635 S33: 0.2302 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 256 THROUGH 268 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.7215 15.5417 98.5172 REMARK 3 T TENSOR REMARK 3 T11: 0.2859 T22: 0.2337 REMARK 3 T33: 0.2587 T12: -0.0041 REMARK 3 T13: 0.0263 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 6.3701 L22: 2.5666 REMARK 3 L33: 5.4531 L12: 0.2083 REMARK 3 L13: 1.9581 L23: 2.0756 REMARK 3 S TENSOR REMARK 3 S11: 0.0343 S12: -0.1205 S13: 0.1258 REMARK 3 S21: 0.7553 S22: 0.0069 S23: 0.0787 REMARK 3 S31: 0.5375 S32: 0.1046 S33: -0.0076 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6NI0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1000238779. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11782 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.19900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.350 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000, MOLREP REMARK 200 STARTING MODEL: PDBID 4GN2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M AMMONIUM SULFATE, 0.1 M MES PH REMARK 280 6.5, 10 % DIOXANE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 128.45100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 21.60200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 21.60200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 64.22550 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 21.60200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 21.60200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 192.67650 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 21.60200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 21.60200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 64.22550 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 21.60200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 21.60200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 192.67650 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 128.45100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -138.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 128.45100 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 443 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 21 REMARK 465 ASN A 22 REMARK 465 ARG A 269 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 52 -135.68 52.44 REMARK 500 ARG A 70 -63.52 -98.10 REMARK 500 ALA A 85 48.50 -140.81 REMARK 500 LYS A 92 55.39 -94.04 REMARK 500 ARG A 147 -3.39 -146.16 REMARK 500 SER A 152 -133.61 -136.60 REMARK 500 ALA A 267 -81.62 -70.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 305 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP97241 RELATED DB: TARGETTRACK DBREF1 6NI0 A 24 269 UNP A0A2Z4T9G7_BURTH DBREF2 6NI0 A A0A2Z4T9G7 24 269 SEQADV 6NI0 SER A 21 UNP A0A2Z4T9G EXPRESSION TAG SEQADV 6NI0 ASN A 22 UNP A0A2Z4T9G EXPRESSION TAG SEQADV 6NI0 ALA A 23 UNP A0A2Z4T9G EXPRESSION TAG SEQRES 1 A 249 SER ASN ALA LYS THR ILE CYS THR ALA ILE ALA ASP ALA SEQRES 2 A 249 GLY THR GLY LYS LEU LEU LEU GLN ASP GLY ASP CYS SER SEQRES 3 A 249 ARG ARG ALA SER PRO ALA SER THR PHE LYS ILE ALA ILE SEQRES 4 A 249 SER LEU MSE GLY TYR ASP ALA GLY PHE LEU ARG ASN GLU SEQRES 5 A 249 HIS ASP PRO VAL LEU PRO TYR ARG ASP THR TYR ILE ALA SEQRES 6 A 249 TRP GLY GLY GLU ALA TRP LYS GLN PRO THR ASP PRO THR SEQRES 7 A 249 ARG TRP LEU LYS TYR SER VAL VAL TRP TYR SER GLN GLN SEQRES 8 A 249 VAL ALA HIS HIS LEU GLY ALA GLN ARG PHE ALA ARG TYR SEQRES 9 A 249 ALA LYS ALA PHE ASP TYR GLY ASN ALA ASP VAL SER GLY SEQRES 10 A 249 ASP PRO GLY LYS ASN ASN GLY LEU ASP ARG SER TRP ILE SEQRES 11 A 249 GLY SER SER LEU GLN ILE SER PRO LEU GLU GLN LEU ARG SEQRES 12 A 249 PHE LEU SER LYS MSE LEU ASN ARG LYS LEU PRO VAL SER SEQRES 13 A 249 PRO ASN ALA VAL ASP MSE THR GLU ARG ILE VAL GLU ALA SEQRES 14 A 249 THR THR LEU ALA ASP GLY THR VAL VAL HIS GLY LYS THR SEQRES 15 A 249 GLY ALA ALA TYR PRO LEU LEU ALA ASP GLY THR ARG ASP SEQRES 16 A 249 TRP ALA HIS GLY PHE GLY TRP PHE VAL GLY TRP ILE THR SEQRES 17 A 249 ARG GLY ASN GLN THR LEU VAL PHE ALA ARG LEU MSE GLN SEQRES 18 A 249 ASP GLU ARG LYS GLN PRO VAL SER THR GLY ILE ARG THR SEQRES 19 A 249 ARG GLU ALA PHE LEU ARG ASP LEU PRO ARG LEU LEU ALA SEQRES 20 A 249 THR ARG MODRES 6NI0 MSE A 62 MET MODIFIED RESIDUE MODRES 6NI0 MSE A 168 MET MODIFIED RESIDUE MODRES 6NI0 MSE A 182 MET MODIFIED RESIDUE MODRES 6NI0 MSE A 240 MET MODIFIED RESIDUE HET MSE A 62 8 HET MSE A 168 8 HET MSE A 182 8 HET MSE A 240 8 HET CL A 301 1 HET SO4 A 302 5 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 CL CL 1- FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 HOH *43(H2 O) HELIX 1 AA1 PRO A 51 THR A 54 5 4 HELIX 2 AA2 PHE A 55 ALA A 66 1 12 HELIX 3 AA3 GLY A 87 TRP A 91 5 5 HELIX 4 AA4 ASP A 96 TYR A 103 1 8 HELIX 5 AA5 VAL A 105 PHE A 128 1 24 HELIX 6 AA6 ASN A 143 SER A 148 1 6 HELIX 7 AA7 SER A 157 ASN A 170 1 14 HELIX 8 AA8 SER A 176 VAL A 187 1 12 HELIX 9 AA9 SER A 249 LEU A 266 1 18 SHEET 1 AA1 6 LEU A 38 GLY A 43 0 SHEET 2 AA1 6 LYS A 24 ASP A 32 -1 N ILE A 30 O LEU A 39 SHEET 3 AA1 6 GLN A 232 GLN A 241 -1 O VAL A 235 N ALA A 31 SHEET 4 AA1 6 PHE A 220 ARG A 229 -1 N ILE A 227 O LEU A 234 SHEET 5 AA1 6 VAL A 197 ALA A 205 -1 N ALA A 205 O PHE A 220 SHEET 6 AA1 6 ALA A 189 THR A 191 -1 N THR A 190 O VAL A 198 SSBOND 1 CYS A 27 CYS A 45 1555 1555 2.03 LINK C LEU A 61 N MSE A 62 1555 1555 1.33 LINK C MSE A 62 N GLY A 63 1555 1555 1.34 LINK C LYS A 167 N MSE A 168 1555 1555 1.33 LINK C MSE A 168 N LEU A 169 1555 1555 1.34 LINK C ASP A 181 N MSE A 182 1555 1555 1.33 LINK C MSE A 182 N THR A 183 1555 1555 1.34 LINK C LEU A 239 N MSE A 240 1555 1555 1.33 LINK C MSE A 240 N GLN A 241 1555 1555 1.33 CISPEP 1 ASP A 74 PRO A 75 0 2.53 SITE 1 AC1 3 LYS A 56 SER A 109 TRP A 149 SITE 1 AC2 8 SER A 53 SER A 104 LYS A 201 THR A 202 SITE 2 AC2 8 ARG A 264 HOH A 409 HOH A 410 HOH A 426 SITE 1 AC3 5 GLY A 117 ALA A 118 GLN A 119 LYS A 172 SITE 2 AC3 5 HOH A 412 SITE 1 AC4 6 GLU A 188 LYS A 201 THR A 202 ARG A 255 SITE 2 AC4 6 ARG A 264 HOH A 404 SITE 1 AC5 2 ARG A 48 ASN A 132 CRYST1 43.204 43.204 256.902 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023146 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023146 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003893 0.00000