HEADER HYDROLASE 07-JAN-19 6NKC TITLE CRYSTAL STRUCTURE OF THE LIPASE LIP_VUT1 FROM GOAT RUMEN METAGENOME. COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIPASE, LIP_VUT1; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.1.3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METAGENOME; SOURCE 3 ORGANISM_TAXID: 256318; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LIPASE, GOAT RUMEN METAGENOMICS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,L.WELK,G.MUKENDI,G.NKHI,T.MOTLOI,R.JEDRZEJCZAK,N.FETO, AUTHOR 2 A.JOACHIMIAK REVDAT 4 20-NOV-24 6NKC 1 REMARK REVDAT 3 15-NOV-23 6NKC 1 REMARK REVDAT 2 11-OCT-23 6NKC 1 REMARK REVDAT 1 22-JAN-20 6NKC 0 JRNL AUTH Y.KIM,L.WELK,R.JEDRZEJCZAK,A.FETO,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF THE LIPASE LIP_VUT1 FROM GOAT RUMEN JRNL TITL 2 METAGENOME. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.63 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 42819 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.710 REMARK 3 FREE R VALUE TEST SET COUNT : 2017 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.2716 - 3.9289 1.00 2969 123 0.1402 0.1431 REMARK 3 2 3.9289 - 3.1191 1.00 2892 163 0.1442 0.1716 REMARK 3 3 3.1191 - 2.7250 1.00 2937 138 0.1609 0.1964 REMARK 3 4 2.7250 - 2.4759 1.00 2932 145 0.1574 0.2368 REMARK 3 5 2.4759 - 2.2985 1.00 2949 133 0.1545 0.1847 REMARK 3 6 2.2985 - 2.1630 1.00 2863 156 0.1467 0.1719 REMARK 3 7 2.1630 - 2.0547 1.00 2900 186 0.1536 0.1971 REMARK 3 8 2.0547 - 1.9652 1.00 2925 132 0.1567 0.1832 REMARK 3 9 1.9652 - 1.8896 1.00 2912 130 0.1624 0.2003 REMARK 3 10 1.8896 - 1.8244 1.00 2947 127 0.1759 0.2203 REMARK 3 11 1.8244 - 1.7673 1.00 2880 154 0.1898 0.2238 REMARK 3 12 1.7673 - 1.7168 1.00 2893 136 0.2027 0.2140 REMARK 3 13 1.7168 - 1.6716 1.00 2935 138 0.2165 0.2883 REMARK 3 14 1.6716 - 1.6308 0.98 2868 156 0.2408 0.2443 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.080 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.48 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2634 REMARK 3 ANGLE : 1.018 3572 REMARK 3 CHIRALITY : 0.069 418 REMARK 3 PLANARITY : 0.006 458 REMARK 3 DIHEDRAL : 13.751 927 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.5402 10.3005 139.1534 REMARK 3 T TENSOR REMARK 3 T11: 0.1862 T22: 0.1774 REMARK 3 T33: 0.1762 T12: -0.0164 REMARK 3 T13: -0.0021 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 3.9135 L22: 1.6831 REMARK 3 L33: 5.8978 L12: -0.1621 REMARK 3 L13: 1.8910 L23: 0.1133 REMARK 3 S TENSOR REMARK 3 S11: 0.4300 S12: 0.0169 S13: -0.3273 REMARK 3 S21: 0.1363 S22: -0.1187 S23: -0.2003 REMARK 3 S31: 0.7186 S32: -0.2558 S33: -0.2955 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 16 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.3707 7.2126 140.9123 REMARK 3 T TENSOR REMARK 3 T11: 0.1446 T22: 0.1956 REMARK 3 T33: 0.1693 T12: 0.0243 REMARK 3 T13: 0.0019 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 2.5601 L22: 2.3736 REMARK 3 L33: 2.7180 L12: 0.2893 REMARK 3 L13: -0.0141 L23: -0.7239 REMARK 3 S TENSOR REMARK 3 S11: 0.0499 S12: 0.0879 S13: -0.0370 REMARK 3 S21: -0.1028 S22: -0.0876 S23: -0.2453 REMARK 3 S31: 0.0265 S32: 0.2423 S33: 0.0309 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 48 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9996 16.8001 134.4855 REMARK 3 T TENSOR REMARK 3 T11: 0.1625 T22: 0.1801 REMARK 3 T33: 0.1941 T12: 0.0050 REMARK 3 T13: 0.0024 T23: 0.0252 REMARK 3 L TENSOR REMARK 3 L11: 1.7886 L22: 1.4902 REMARK 3 L33: 2.8642 L12: -0.1606 REMARK 3 L13: -1.1870 L23: -0.7678 REMARK 3 S TENSOR REMARK 3 S11: 0.1127 S12: 0.1199 S13: 0.1831 REMARK 3 S21: -0.0125 S22: -0.0804 S23: -0.0901 REMARK 3 S31: -0.2102 S32: 0.0345 S33: -0.0275 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 80 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.6895 19.8299 136.1891 REMARK 3 T TENSOR REMARK 3 T11: 0.1942 T22: 0.1872 REMARK 3 T33: 0.2155 T12: 0.0286 REMARK 3 T13: 0.0165 T23: 0.0265 REMARK 3 L TENSOR REMARK 3 L11: 1.4405 L22: 2.4806 REMARK 3 L33: 2.8777 L12: 0.5386 REMARK 3 L13: -0.5364 L23: -0.7160 REMARK 3 S TENSOR REMARK 3 S11: 0.1141 S12: 0.2045 S13: 0.2402 REMARK 3 S21: -0.0303 S22: -0.0025 S23: 0.0558 REMARK 3 S31: -0.2928 S32: -0.1428 S33: -0.1044 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 103 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6933 21.7141 140.1986 REMARK 3 T TENSOR REMARK 3 T11: 0.2123 T22: 0.2294 REMARK 3 T33: 0.2352 T12: 0.0714 REMARK 3 T13: 0.0072 T23: 0.0218 REMARK 3 L TENSOR REMARK 3 L11: 2.4400 L22: 5.0229 REMARK 3 L33: 2.9792 L12: -0.2578 REMARK 3 L13: -0.7157 L23: 1.0053 REMARK 3 S TENSOR REMARK 3 S11: -0.0426 S12: 0.1391 S13: 0.1711 REMARK 3 S21: -0.2467 S22: -0.0683 S23: 0.4589 REMARK 3 S31: -0.7756 S32: -0.7155 S33: 0.1422 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 120 THROUGH 158 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.6507 12.9186 151.0706 REMARK 3 T TENSOR REMARK 3 T11: 0.1360 T22: 0.1694 REMARK 3 T33: 0.1678 T12: -0.0020 REMARK 3 T13: 0.0094 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 1.6284 L22: 0.9853 REMARK 3 L33: 2.4859 L12: 0.0616 REMARK 3 L13: -0.1200 L23: 0.2495 REMARK 3 S TENSOR REMARK 3 S11: 0.0621 S12: -0.1162 S13: 0.0738 REMARK 3 S21: 0.0208 S22: -0.0459 S23: 0.0998 REMARK 3 S31: -0.0436 S32: -0.2597 S33: -0.0089 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 159 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.0330 3.3940 142.2082 REMARK 3 T TENSOR REMARK 3 T11: 0.1619 T22: 0.1810 REMARK 3 T33: 0.2217 T12: -0.0627 REMARK 3 T13: -0.0001 T23: -0.0256 REMARK 3 L TENSOR REMARK 3 L11: 4.0816 L22: 5.8534 REMARK 3 L33: 7.9320 L12: -0.1674 REMARK 3 L13: 0.6676 L23: -1.2567 REMARK 3 S TENSOR REMARK 3 S11: 0.2078 S12: -0.1602 S13: -0.1577 REMARK 3 S21: -0.1926 S22: 0.0053 S23: 0.5469 REMARK 3 S31: 0.5059 S32: -0.8439 S33: -0.2179 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.2028 -15.2265 134.5851 REMARK 3 T TENSOR REMARK 3 T11: 0.1947 T22: 0.1746 REMARK 3 T33: 0.1755 T12: 0.0204 REMARK 3 T13: -0.0064 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 4.2357 L22: 1.7971 REMARK 3 L33: 5.1693 L12: 0.2718 REMARK 3 L13: 0.9754 L23: 0.1774 REMARK 3 S TENSOR REMARK 3 S11: 0.3925 S12: 0.0367 S13: -0.4710 REMARK 3 S21: -0.0933 S22: -0.0618 S23: 0.1833 REMARK 3 S31: 0.7001 S32: 0.4238 S33: -0.2990 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 16 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.4382 -17.7217 132.3161 REMARK 3 T TENSOR REMARK 3 T11: 0.1549 T22: 0.1958 REMARK 3 T33: 0.1840 T12: -0.0340 REMARK 3 T13: -0.0044 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 2.5164 L22: 2.1708 REMARK 3 L33: 2.5370 L12: -0.4641 REMARK 3 L13: -0.0698 L23: 0.5806 REMARK 3 S TENSOR REMARK 3 S11: 0.0357 S12: -0.0824 S13: -0.0698 REMARK 3 S21: 0.0711 S22: -0.0703 S23: 0.2394 REMARK 3 S31: 0.0170 S32: -0.2244 S33: 0.0341 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 48 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.0637 -8.1400 138.7422 REMARK 3 T TENSOR REMARK 3 T11: 0.1536 T22: 0.1696 REMARK 3 T33: 0.1913 T12: -0.0011 REMARK 3 T13: 0.0078 T23: -0.0262 REMARK 3 L TENSOR REMARK 3 L11: 1.6761 L22: 1.3126 REMARK 3 L33: 2.6679 L12: 0.2443 REMARK 3 L13: -1.2454 L23: 0.5923 REMARK 3 S TENSOR REMARK 3 S11: 0.1502 S12: -0.1139 S13: 0.1502 REMARK 3 S21: -0.0214 S22: -0.1036 S23: 0.1048 REMARK 3 S31: -0.1830 S32: -0.0072 S33: -0.0396 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 80 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2489 -5.1001 137.0487 REMARK 3 T TENSOR REMARK 3 T11: 0.1795 T22: 0.1809 REMARK 3 T33: 0.2125 T12: -0.0381 REMARK 3 T13: 0.0131 T23: -0.0272 REMARK 3 L TENSOR REMARK 3 L11: 1.3990 L22: 2.2026 REMARK 3 L33: 2.8798 L12: -0.5187 REMARK 3 L13: -0.4973 L23: 0.7688 REMARK 3 S TENSOR REMARK 3 S11: 0.0955 S12: -0.2288 S13: 0.2598 REMARK 3 S21: 0.1031 S22: 0.0083 S23: -0.0805 REMARK 3 S31: -0.3028 S32: 0.1284 S33: -0.0981 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 103 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.6885 -3.4504 133.5483 REMARK 3 T TENSOR REMARK 3 T11: 0.2418 T22: 0.2451 REMARK 3 T33: 0.2485 T12: -0.0714 REMARK 3 T13: 0.0125 T23: -0.0285 REMARK 3 L TENSOR REMARK 3 L11: 2.0262 L22: 4.7301 REMARK 3 L33: 4.1544 L12: 0.5400 REMARK 3 L13: -0.8526 L23: -1.1399 REMARK 3 S TENSOR REMARK 3 S11: -0.0279 S12: -0.1601 S13: 0.2508 REMARK 3 S21: 0.3515 S22: -0.1027 S23: -0.3668 REMARK 3 S31: -0.7663 S32: 0.8070 S33: 0.1633 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 120 THROUGH 158 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2747 -12.0201 122.1405 REMARK 3 T TENSOR REMARK 3 T11: 0.1453 T22: 0.1701 REMARK 3 T33: 0.1804 T12: 0.0008 REMARK 3 T13: 0.0116 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 1.8751 L22: 1.0642 REMARK 3 L33: 2.5188 L12: 0.0491 REMARK 3 L13: -0.0549 L23: -0.2949 REMARK 3 S TENSOR REMARK 3 S11: 0.0586 S12: 0.1663 S13: 0.0841 REMARK 3 S21: -0.0256 S22: -0.0199 S23: -0.1247 REMARK 3 S31: -0.0932 S32: 0.2509 S33: -0.0311 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 159 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8836 -21.5316 131.0051 REMARK 3 T TENSOR REMARK 3 T11: 0.1748 T22: 0.1994 REMARK 3 T33: 0.2105 T12: 0.0446 REMARK 3 T13: -0.0124 T23: 0.0190 REMARK 3 L TENSOR REMARK 3 L11: 4.5938 L22: 6.5506 REMARK 3 L33: 1.9487 L12: 0.4618 REMARK 3 L13: 1.2673 L23: 1.9637 REMARK 3 S TENSOR REMARK 3 S11: 0.3342 S12: 0.0691 S13: -0.3448 REMARK 3 S21: 0.1459 S22: 0.0811 S23: -0.5290 REMARK 3 S31: 0.4526 S32: 0.7498 S33: -0.4271 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6NKC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1000238889. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 X 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42897 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.630 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.17200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.81900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.670 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000, MOLREP REMARK 200 STARTING MODEL: 1T2N REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 % TRYPTONE, 0.05 M HEPES SODIUM PH REMARK 280 7.0, 12% W/V POLYETHYLENE GLYCOL 3,350, 0.001 M SODIUM AZIDE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.81250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 106.21875 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.40625 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 0 REMARK 465 ALA A 1 REMARK 465 GLY A 173 REMARK 465 LYS A 174 REMARK 465 HIS A 175 REMARK 465 HIS A 176 REMARK 465 HIS A 177 REMARK 465 HIS A 178 REMARK 465 HIS A 179 REMARK 465 HIS A 180 REMARK 465 MSE B 0 REMARK 465 GLY B 173 REMARK 465 LYS B 174 REMARK 465 HIS B 175 REMARK 465 HIS B 176 REMARK 465 HIS B 177 REMARK 465 HIS B 178 REMARK 465 HIS B 179 REMARK 465 HIS B 180 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 77 -132.23 61.93 REMARK 500 LEU A 90 -140.75 -107.79 REMARK 500 PHE A 157 43.49 -140.75 REMARK 500 SER B 77 -133.02 61.28 REMARK 500 LEU B 90 -140.17 -105.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AZI A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 201 DBREF1 6NKC A 1 174 UNP A0A1D8GR37_BACLI DBREF2 6NKC A A0A1D8GR37 31 204 DBREF1 6NKC B 1 174 UNP A0A1D8GR37_BACLI DBREF2 6NKC B A0A1D8GR37 31 204 SEQADV 6NKC MSE A 0 UNP A0A1D8GR3 INITIATING METHIONINE SEQADV 6NKC HIS A 175 UNP A0A1D8GR3 EXPRESSION TAG SEQADV 6NKC HIS A 176 UNP A0A1D8GR3 EXPRESSION TAG SEQADV 6NKC HIS A 177 UNP A0A1D8GR3 EXPRESSION TAG SEQADV 6NKC HIS A 178 UNP A0A1D8GR3 EXPRESSION TAG SEQADV 6NKC HIS A 179 UNP A0A1D8GR3 EXPRESSION TAG SEQADV 6NKC HIS A 180 UNP A0A1D8GR3 EXPRESSION TAG SEQADV 6NKC MSE B 0 UNP A0A1D8GR3 INITIATING METHIONINE SEQADV 6NKC HIS B 175 UNP A0A1D8GR3 EXPRESSION TAG SEQADV 6NKC HIS B 176 UNP A0A1D8GR3 EXPRESSION TAG SEQADV 6NKC HIS B 177 UNP A0A1D8GR3 EXPRESSION TAG SEQADV 6NKC HIS B 178 UNP A0A1D8GR3 EXPRESSION TAG SEQADV 6NKC HIS B 179 UNP A0A1D8GR3 EXPRESSION TAG SEQADV 6NKC HIS B 180 UNP A0A1D8GR3 EXPRESSION TAG SEQRES 1 A 181 MSE ALA SER HIS ASN PRO VAL VAL MSE VAL HIS GLY ILE SEQRES 2 A 181 GLY GLY ALA ASP TYR ASN PHE ILE GLY ILE LYS SER TYR SEQRES 3 A 181 LEU GLN SER GLN GLY TRP THR SER SER GLU LEU TYR ALA SEQRES 4 A 181 ILE ASN PHE ILE ASP LYS THR GLY ASN ASN ILE ASN ASN SEQRES 5 A 181 ALA PRO ARG LEU SER GLU TYR ILE LYS ARG VAL LEU ASN SEQRES 6 A 181 GLN THR GLY ALA SER LYS VAL ASP ILE VAL ALA HIS SER SEQRES 7 A 181 MSE GLY GLY ALA ASN THR LEU TYR TYR ILE LYS ASN LEU SEQRES 8 A 181 ASP GLY ALA ASP LYS VAL GLY HIS VAL VAL THR LEU GLY SEQRES 9 A 181 GLY ALA ASN ARG LEU VAL THR ASN THR ALA PRO GLN ASN SEQRES 10 A 181 ASP LYS ILE SER TYR THR SER ILE TYR SER THR SER ASP SEQRES 11 A 181 TYR ILE VAL LEU ASN SER LEU SER LYS LEU ASP GLY ALA SEQRES 12 A 181 ASN ASN VAL GLN ILE SER GLY VAL SER HIS VAL GLY LEU SEQRES 13 A 181 LEU PHE SER SER LYS VAL ASN ALA LEU ILE LYS ASP GLY SEQRES 14 A 181 LEU THR ALA SER GLY LYS HIS HIS HIS HIS HIS HIS SEQRES 1 B 181 MSE ALA SER HIS ASN PRO VAL VAL MSE VAL HIS GLY ILE SEQRES 2 B 181 GLY GLY ALA ASP TYR ASN PHE ILE GLY ILE LYS SER TYR SEQRES 3 B 181 LEU GLN SER GLN GLY TRP THR SER SER GLU LEU TYR ALA SEQRES 4 B 181 ILE ASN PHE ILE ASP LYS THR GLY ASN ASN ILE ASN ASN SEQRES 5 B 181 ALA PRO ARG LEU SER GLU TYR ILE LYS ARG VAL LEU ASN SEQRES 6 B 181 GLN THR GLY ALA SER LYS VAL ASP ILE VAL ALA HIS SER SEQRES 7 B 181 MSE GLY GLY ALA ASN THR LEU TYR TYR ILE LYS ASN LEU SEQRES 8 B 181 ASP GLY ALA ASP LYS VAL GLY HIS VAL VAL THR LEU GLY SEQRES 9 B 181 GLY ALA ASN ARG LEU VAL THR ASN THR ALA PRO GLN ASN SEQRES 10 B 181 ASP LYS ILE SER TYR THR SER ILE TYR SER THR SER ASP SEQRES 11 B 181 TYR ILE VAL LEU ASN SER LEU SER LYS LEU ASP GLY ALA SEQRES 12 B 181 ASN ASN VAL GLN ILE SER GLY VAL SER HIS VAL GLY LEU SEQRES 13 B 181 LEU PHE SER SER LYS VAL ASN ALA LEU ILE LYS ASP GLY SEQRES 14 B 181 LEU THR ALA SER GLY LYS HIS HIS HIS HIS HIS HIS MODRES 6NKC MSE A 8 MET MODIFIED RESIDUE MODRES 6NKC MSE A 78 MET MODIFIED RESIDUE MODRES 6NKC MSE B 8 MET MODIFIED RESIDUE MODRES 6NKC MSE B 78 MET MODIFIED RESIDUE HET MSE A 8 8 HET MSE A 78 8 HET MSE B 8 8 HET MSE B 78 8 HET CL A 200 1 HET EDO A 201 4 HET AZI A 202 3 HET CL B 200 1 HET EDO B 201 4 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM AZI AZIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 CL 2(CL 1-) FORMUL 4 EDO 2(C2 H6 O2) FORMUL 5 AZI N3 1- FORMUL 8 HOH *386(H2 O) HELIX 1 AA1 ALA A 15 ASN A 18 5 4 HELIX 2 AA2 PHE A 19 GLN A 29 1 11 HELIX 3 AA3 THR A 32 SER A 34 5 3 HELIX 4 AA4 ASN A 47 GLY A 67 1 21 HELIX 5 AA5 MSE A 78 LEU A 90 1 13 HELIX 6 AA6 ASP A 91 ASP A 94 5 4 HELIX 7 AA7 ALA A 105 VAL A 109 5 5 HELIX 8 AA8 LEU A 133 LYS A 138 1 6 HELIX 9 AA9 HIS A 152 PHE A 157 5 6 HELIX 10 AB1 SER A 158 THR A 170 1 13 HELIX 11 AB2 ALA B 15 ASN B 18 5 4 HELIX 12 AB3 PHE B 19 GLN B 29 1 11 HELIX 13 AB4 THR B 32 SER B 34 5 3 HELIX 14 AB5 ASN B 47 GLY B 67 1 21 HELIX 15 AB6 MSE B 78 LEU B 90 1 13 HELIX 16 AB7 ASP B 91 ASP B 94 5 4 HELIX 17 AB8 ALA B 105 VAL B 109 5 5 HELIX 18 AB9 LEU B 133 LYS B 138 1 6 HELIX 19 AC1 HIS B 152 PHE B 157 5 6 HELIX 20 AC2 SER B 158 THR B 170 1 13 SHEET 1 AA1 6 LEU A 36 ALA A 38 0 SHEET 2 AA1 6 VAL A 6 VAL A 9 1 N VAL A 6 O TYR A 37 SHEET 3 AA1 6 VAL A 71 HIS A 76 1 O ASP A 72 N VAL A 7 SHEET 4 AA1 6 VAL A 96 LEU A 102 1 O GLY A 97 N VAL A 71 SHEET 5 AA1 6 SER A 120 SER A 126 1 O ILE A 124 N THR A 101 SHEET 6 AA1 6 ASN A 143 ILE A 147 1 O VAL A 145 N SER A 123 SHEET 1 AA2 6 LEU B 36 ALA B 38 0 SHEET 2 AA2 6 VAL B 6 VAL B 9 1 N VAL B 6 O TYR B 37 SHEET 3 AA2 6 VAL B 71 HIS B 76 1 O ASP B 72 N VAL B 7 SHEET 4 AA2 6 VAL B 96 LEU B 102 1 O GLY B 97 N VAL B 71 SHEET 5 AA2 6 SER B 120 SER B 126 1 O SER B 120 N VAL B 99 SHEET 6 AA2 6 ASN B 143 ILE B 147 1 O VAL B 145 N SER B 123 LINK C VAL A 7 N MSE A 8 1555 1555 1.33 LINK C MSE A 8 N VAL A 9 1555 1555 1.33 LINK C SER A 77 N MSE A 78 1555 1555 1.33 LINK C MSE A 78 N GLY A 79 1555 1555 1.34 LINK C VAL B 7 N MSE B 8 1555 1555 1.33 LINK C MSE B 8 N VAL B 9 1555 1555 1.33 LINK C SER B 77 N MSE B 78 1555 1555 1.33 LINK C MSE B 78 N GLY B 79 1555 1555 1.35 SITE 1 AC1 3 TYR A 130 HIS A 152 ILE B 20 SITE 1 AC2 5 ARG A 61 VAL A 62 GLN A 65 HOH A 304 SITE 2 AC2 5 HOH A 317 SITE 1 AC3 5 SER A 159 HOH A 330 HOH A 375 SER B 159 SITE 2 AC3 5 HOH B 402 SITE 1 AC4 3 ILE A 20 TYR B 130 HIS B 152 SITE 1 AC5 7 TYR B 58 ARG B 61 VAL B 62 GLN B 65 SITE 2 AC5 7 HOH B 308 HOH B 323 HOH B 430 CRYST1 49.870 49.870 141.625 90.00 90.00 90.00 P 43 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020052 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020052 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007061 0.00000